Query 005923
Match_columns 669
No_of_seqs 529 out of 4170
Neff 8.4
Searched_HMMs 46136
Date Thu Mar 28 15:45:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005923.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005923hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 9.7E-51 2.1E-55 431.9 26.2 278 356-649 61-355 (361)
2 KOG0197 Tyrosine kinases [Sign 100.0 1.6E-48 3.5E-53 410.7 19.9 245 366-650 213-465 (468)
3 KOG1026 Nerve growth factor re 100.0 1.2E-47 2.7E-52 422.2 22.6 249 366-650 493-766 (774)
4 KOG0192 Tyrosine kinase specif 100.0 1.5E-46 3.3E-51 397.0 24.6 244 367-649 49-306 (362)
5 KOG0196 Tyrosine kinase, EPH ( 100.0 1.8E-46 3.9E-51 404.6 10.0 251 360-650 631-895 (996)
6 KOG3653 Transforming growth fa 100.0 1.7E-42 3.8E-47 356.9 24.8 272 358-652 210-509 (534)
7 KOG0581 Mitogen-activated prot 100.0 4.8E-43 1E-47 353.7 17.0 237 366-642 86-335 (364)
8 KOG1094 Discoidin domain recep 100.0 9.3E-42 2E-46 357.6 23.9 246 366-646 545-804 (807)
9 KOG1095 Protein tyrosine kinas 100.0 4.7E-42 1E-46 391.1 19.2 249 367-651 700-966 (1025)
10 KOG0575 Polo-like serine/threo 100.0 1.5E-41 3.3E-46 361.2 20.7 240 358-642 18-269 (592)
11 KOG4278 Protein tyrosine kinas 100.0 3.5E-42 7.7E-47 361.5 13.9 245 366-650 274-527 (1157)
12 KOG0595 Serine/threonine-prote 100.0 4.1E-41 8.9E-46 342.2 20.5 193 358-575 10-219 (429)
13 KOG4721 Serine/threonine prote 100.0 7.5E-42 1.6E-46 356.7 14.0 235 367-644 132-366 (904)
14 KOG0591 NIMA (never in mitosis 100.0 9E-42 1.9E-46 330.4 11.0 252 356-644 17-283 (375)
15 KOG0615 Serine/threonine prote 100.0 2E-41 4.4E-46 343.8 13.6 239 364-642 177-437 (475)
16 KOG0661 MAPK related serine/th 100.0 5.4E-41 1.2E-45 346.2 13.7 256 358-642 10-291 (538)
17 PHA02988 hypothetical protein; 100.0 1.4E-39 3E-44 338.5 22.5 238 366-648 27-281 (283)
18 KOG0194 Protein tyrosine kinas 100.0 1.9E-40 4.2E-45 355.1 16.1 245 366-652 164-426 (474)
19 KOG0592 3-phosphoinositide-dep 100.0 6.5E-40 1.4E-44 343.1 19.4 251 356-643 71-339 (604)
20 KOG2052 Activin A type IB rece 100.0 1.8E-40 3.8E-45 339.7 13.1 253 366-649 218-506 (513)
21 KOG0600 Cdc2-related protein k 100.0 3.1E-39 6.7E-44 335.5 20.8 252 366-642 124-400 (560)
22 KOG4257 Focal adhesion tyrosin 100.0 3E-39 6.6E-44 340.3 20.7 241 366-648 396-651 (974)
23 KOG0593 Predicted protein kina 100.0 1.3E-39 2.8E-44 318.4 15.5 250 366-642 9-284 (396)
24 cd05102 PTKc_VEGFR3 Catalytic 100.0 9.1E-39 2E-43 340.8 20.4 255 359-649 8-337 (338)
25 KOG0578 p21-activated serine/t 100.0 3.5E-39 7.6E-44 340.6 16.8 235 366-642 280-523 (550)
26 KOG0598 Ribosomal protein S6 k 100.0 2.3E-39 5E-44 327.0 14.8 232 360-635 27-270 (357)
27 KOG0198 MEKK and related serin 100.0 4.4E-39 9.5E-44 330.5 16.8 246 360-644 19-278 (313)
28 KOG0193 Serine/threonine prote 100.0 6.6E-39 1.4E-43 339.3 17.6 246 366-649 399-656 (678)
29 KOG0199 ACK and related non-re 100.0 7.1E-39 1.5E-43 341.5 16.9 239 366-643 117-369 (1039)
30 KOG0659 Cdk activating kinase 100.0 5E-38 1.1E-42 302.7 19.6 255 360-642 4-281 (318)
31 KOG0582 Ste20-like serine/thre 100.0 4.8E-38 1E-42 322.1 20.6 256 357-642 25-293 (516)
32 cd05064 PTKc_EphR_A10 Catalyti 100.0 6.8E-38 1.5E-42 322.5 21.6 246 359-646 6-265 (266)
33 cd05048 PTKc_Ror Catalytic Dom 100.0 1.1E-37 2.4E-42 323.5 22.4 250 360-646 7-283 (283)
34 PF07714 Pkinase_Tyr: Protein 100.0 2.2E-38 4.7E-43 325.1 16.2 239 366-643 6-259 (259)
35 PLN00113 leucine-rich repeat r 100.0 4.9E-37 1.1E-41 371.5 28.3 254 366-652 697-957 (968)
36 cd05096 PTKc_DDR1 Catalytic do 100.0 3E-37 6.6E-42 324.1 22.9 256 359-644 6-303 (304)
37 PLN00034 mitogen-activated pro 100.0 8.1E-37 1.8E-41 327.9 26.5 233 366-642 81-328 (353)
38 cd05104 PTKc_Kit Catalytic dom 100.0 1.7E-37 3.7E-42 335.7 21.4 252 359-646 36-374 (375)
39 cd05106 PTKc_CSF-1R Catalytic 100.0 1.8E-37 3.8E-42 335.5 19.9 253 359-647 39-373 (374)
40 KOG1024 Receptor-like protein 100.0 4E-37 8.7E-42 309.5 19.9 246 367-648 292-557 (563)
41 KOG1025 Epidermal growth facto 100.0 4.3E-38 9.3E-43 340.7 13.7 246 364-650 701-961 (1177)
42 KOG0588 Serine/threonine prote 100.0 1.4E-37 3.1E-42 331.6 17.1 241 357-643 11-264 (786)
43 cd05052 PTKc_Abl Catalytic dom 100.0 1.3E-36 2.8E-41 312.3 22.9 241 366-646 13-262 (263)
44 KOG0616 cAMP-dependent protein 100.0 3.7E-37 8E-42 300.8 17.2 220 367-633 52-283 (355)
45 cd05108 PTKc_EGFR Catalytic do 100.0 1.1E-36 2.5E-41 321.6 22.3 247 366-653 14-275 (316)
46 KOG0597 Serine-threonine prote 100.0 2.7E-37 5.9E-42 323.1 16.8 237 360-642 4-251 (808)
47 cd05111 PTK_HER3 Pseudokinase 100.0 2E-36 4.4E-41 313.8 23.0 247 366-653 14-275 (279)
48 KOG0583 Serine/threonine prote 100.0 1.1E-36 2.5E-41 324.7 21.3 243 358-647 17-279 (370)
49 cd05094 PTKc_TrkC Catalytic do 100.0 2E-36 4.4E-41 315.8 22.8 256 360-652 7-288 (291)
50 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.4E-36 2.9E-41 310.7 21.0 238 366-644 11-256 (256)
51 cd05093 PTKc_TrkB Catalytic do 100.0 2.6E-36 5.6E-41 314.5 23.1 257 360-653 7-286 (288)
52 cd05116 PTKc_Syk Catalytic dom 100.0 2.4E-36 5.2E-41 309.2 22.1 241 366-647 2-256 (257)
53 cd05115 PTKc_Zap-70 Catalytic 100.0 2.7E-36 5.9E-41 309.0 22.4 242 366-647 2-256 (257)
54 cd05045 PTKc_RET Catalytic dom 100.0 3E-36 6.5E-41 314.2 23.0 248 366-649 7-289 (290)
55 cd05571 STKc_PKB Catalytic dom 100.0 7.2E-37 1.6E-41 324.3 18.5 232 367-642 3-251 (323)
56 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.8E-36 4E-41 329.4 21.9 254 359-648 38-399 (400)
57 cd05033 PTKc_EphR Catalytic do 100.0 2.4E-36 5.1E-41 310.7 21.6 246 360-646 6-265 (266)
58 cd05090 PTKc_Ror1 Catalytic do 100.0 2.2E-36 4.8E-41 314.0 21.3 249 360-645 7-282 (283)
59 cd08229 STKc_Nek7 Catalytic do 100.0 4.8E-36 1E-40 308.3 23.5 252 359-647 3-266 (267)
60 cd05072 PTKc_Lyn Catalytic dom 100.0 2.9E-36 6.4E-41 309.0 21.8 246 360-646 8-261 (261)
61 cd05049 PTKc_Trk Catalytic dom 100.0 2.9E-36 6.3E-41 312.1 21.9 250 359-645 6-280 (280)
62 cd05585 STKc_YPK1_like Catalyt 100.0 8.1E-37 1.8E-41 322.3 18.0 231 367-641 1-246 (312)
63 cd08228 STKc_Nek6 Catalytic do 100.0 4.2E-36 9.2E-41 308.7 22.9 252 359-647 3-266 (267)
64 KOG0585 Ca2+/calmodulin-depend 100.0 9.2E-37 2E-41 314.4 17.8 252 356-646 95-376 (576)
65 cd05084 PTKc_Fes Catalytic dom 100.0 3.1E-36 6.7E-41 307.1 21.7 239 366-644 2-251 (252)
66 cd05631 STKc_GRK4 Catalytic do 100.0 2.3E-36 4.9E-41 314.6 20.9 237 367-642 8-261 (285)
67 cd05068 PTKc_Frk_like Catalyti 100.0 2.9E-36 6.4E-41 309.1 21.2 246 360-646 8-261 (261)
68 KOG0663 Protein kinase PITSLRE 100.0 1.3E-36 2.8E-41 301.1 17.7 251 366-642 83-361 (419)
69 cd05059 PTKc_Tec_like Catalyti 100.0 4.6E-36 1E-40 306.8 22.1 242 360-643 6-255 (256)
70 PTZ00263 protein kinase A cata 100.0 7.3E-37 1.6E-41 325.1 16.8 237 358-642 18-271 (329)
71 cd05612 STKc_PRKX_like Catalyt 100.0 1.2E-36 2.7E-41 317.6 17.7 230 366-642 8-254 (291)
72 cd06649 PKc_MEK2 Catalytic dom 100.0 6.8E-36 1.5E-40 317.9 23.5 250 366-643 12-302 (331)
73 cd05595 STKc_PKB_beta Catalyti 100.0 2.2E-36 4.8E-41 320.5 19.4 232 367-642 3-251 (323)
74 cd07848 STKc_CDKL5 Catalytic d 100.0 3.2E-36 7E-41 313.3 20.1 253 367-641 9-283 (287)
75 cd05054 PTKc_VEGFR Catalytic d 100.0 4.2E-36 9.2E-41 320.2 21.3 255 359-649 8-336 (337)
76 cd05091 PTKc_Ror2 Catalytic do 100.0 5.6E-36 1.2E-40 310.8 21.4 249 360-645 7-282 (283)
77 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.7E-36 1.5E-40 306.1 21.6 246 359-646 7-261 (261)
78 cd05107 PTKc_PDGFR_beta Cataly 100.0 7.4E-36 1.6E-40 324.6 23.1 247 366-647 44-400 (401)
79 cd05075 PTKc_Axl Catalytic dom 100.0 1.1E-35 2.3E-40 306.5 23.0 245 366-646 6-271 (272)
80 cd05082 PTKc_Csk Catalytic dom 100.0 7.2E-36 1.6E-40 305.3 21.3 242 360-646 8-256 (256)
81 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5.9E-36 1.3E-40 306.3 20.6 243 360-644 6-256 (256)
82 KOG0694 Serine/threonine prote 100.0 4E-36 8.7E-41 323.2 20.1 235 356-636 366-613 (694)
83 KOG0605 NDR and related serine 100.0 2.2E-36 4.7E-41 317.1 17.6 256 366-654 148-454 (550)
84 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 7E-36 1.5E-40 310.3 21.3 258 366-646 11-283 (284)
85 cd05035 PTKc_Axl_like Catalyti 100.0 1E-35 2.2E-40 306.5 22.1 245 366-646 6-272 (273)
86 cd05062 PTKc_IGF-1R Catalytic 100.0 7.5E-36 1.6E-40 309.0 21.2 248 360-644 8-276 (277)
87 cd05039 PTKc_Csk_like Catalyti 100.0 1.2E-35 2.7E-40 303.4 22.2 243 359-646 7-256 (256)
88 cd05047 PTKc_Tie Catalytic dom 100.0 1.5E-35 3.3E-40 305.6 22.9 242 367-647 3-269 (270)
89 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.2E-35 2.7E-40 311.8 22.6 257 359-652 16-302 (304)
90 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.2E-35 2.5E-40 308.5 22.1 256 366-647 11-282 (283)
91 cd05593 STKc_PKB_gamma Catalyt 100.0 4.3E-36 9.2E-41 319.1 19.1 232 367-642 3-251 (328)
92 cd05043 PTK_Ryk Pseudokinase d 100.0 1.4E-35 3E-40 307.4 22.2 253 359-648 7-278 (280)
93 cd05089 PTKc_Tie1 Catalytic do 100.0 1.3E-35 2.9E-40 310.6 22.2 252 359-650 3-279 (297)
94 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.6E-35 3.5E-40 308.7 22.6 257 358-641 5-284 (288)
95 cd05053 PTKc_FGFR Catalytic do 100.0 1E-35 2.3E-40 310.4 21.1 246 366-647 19-292 (293)
96 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5E-36 1.1E-40 319.1 18.8 238 366-642 8-257 (333)
97 PTZ00267 NIMA-related protein 100.0 7.1E-36 1.5E-40 333.0 20.8 245 359-641 68-322 (478)
98 cd05608 STKc_GRK1 Catalytic do 100.0 1.1E-35 2.3E-40 308.7 20.7 240 367-642 1-257 (280)
99 cd05109 PTKc_HER2 Catalytic do 100.0 2.6E-35 5.6E-40 305.3 23.2 247 366-653 14-275 (279)
100 KOG0201 Serine/threonine prote 100.0 5E-37 1.1E-41 314.7 10.1 239 360-642 15-263 (467)
101 cd05088 PTKc_Tie2 Catalytic do 100.0 8.9E-36 1.9E-40 312.9 19.9 257 359-655 8-289 (303)
102 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.8E-35 3.8E-40 306.3 21.8 243 366-644 13-276 (277)
103 cd05584 STKc_p70S6K Catalytic 100.0 6.6E-36 1.4E-40 316.9 19.0 233 366-642 3-256 (323)
104 cd05060 PTKc_Syk_like Catalyti 100.0 2.3E-35 4.9E-40 301.8 22.1 241 366-647 2-256 (257)
105 PTZ00426 cAMP-dependent protei 100.0 5.3E-36 1.2E-40 319.7 18.0 236 359-642 31-284 (340)
106 cd05085 PTKc_Fer Catalytic dom 100.0 3.2E-35 6.9E-40 299.2 22.8 237 367-644 3-249 (250)
107 cd05055 PTKc_PDGFR Catalytic d 100.0 2.4E-35 5.2E-40 309.6 22.5 248 360-646 37-301 (302)
108 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.2E-35 4.7E-40 310.5 22.1 255 359-650 19-303 (307)
109 cd05071 PTKc_Src Catalytic dom 100.0 3.2E-35 6.9E-40 301.9 22.8 246 360-647 8-261 (262)
110 cd06650 PKc_MEK1 Catalytic dom 100.0 2.4E-35 5.1E-40 314.0 22.6 253 360-642 7-299 (333)
111 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.9E-35 8.4E-40 301.2 23.4 251 359-647 3-266 (267)
112 cd05582 STKc_RSK_N N-terminal 100.0 1.7E-36 3.7E-41 320.6 13.6 229 366-638 3-245 (318)
113 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3E-35 6.5E-40 301.4 22.3 244 360-645 8-259 (260)
114 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.9E-35 8.4E-40 302.3 23.2 247 366-644 2-268 (269)
115 KOG0594 Protein kinase PCTAIRE 100.0 2.8E-35 6E-40 297.4 21.3 258 366-646 18-308 (323)
116 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.1E-35 8.8E-40 301.7 23.1 242 366-646 12-267 (268)
117 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.4E-35 5.2E-40 314.1 22.1 252 366-642 7-290 (338)
118 PHA03212 serine/threonine kina 100.0 2E-35 4.2E-40 321.0 21.5 260 359-642 93-376 (391)
119 cd08529 STKc_FA2-like Catalyti 100.0 2.6E-35 5.7E-40 300.5 21.1 235 367-642 8-253 (256)
120 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.6E-35 7.9E-40 312.7 23.1 254 360-650 14-297 (334)
121 KOG0658 Glycogen synthase kina 100.0 2.3E-36 5E-41 304.6 13.0 258 367-649 32-315 (364)
122 cd05042 PTKc_Aatyk Catalytic d 100.0 4.3E-35 9.3E-40 301.9 22.8 247 366-644 2-268 (269)
123 KOG0611 Predicted serine/threo 100.0 4.6E-36 1E-40 302.6 15.0 238 359-643 54-304 (668)
124 cd05594 STKc_PKB_alpha Catalyt 100.0 6.6E-36 1.4E-40 317.2 16.9 232 367-642 3-252 (325)
125 cd05066 PTKc_EphR_A Catalytic 100.0 3.6E-35 7.7E-40 302.2 21.8 248 359-646 5-266 (267)
126 cd05099 PTKc_FGFR4 Catalytic d 100.0 4E-35 8.6E-40 309.6 22.5 255 359-650 13-297 (314)
127 cd05067 PTKc_Lck_Blk Catalytic 100.0 3E-35 6.5E-40 301.4 20.8 244 360-645 8-259 (260)
128 cd05058 PTKc_Met_Ron Catalytic 100.0 5E-35 1.1E-39 299.8 22.3 244 367-648 3-261 (262)
129 KOG0610 Putative serine/threon 100.0 4.2E-35 9.1E-40 298.4 21.2 245 366-642 84-392 (459)
130 cd05607 STKc_GRK7 Catalytic do 100.0 4.3E-35 9.3E-40 303.7 21.9 239 367-643 1-251 (277)
131 cd05591 STKc_nPKC_epsilon Cata 100.0 1.4E-35 3.1E-40 314.0 18.6 232 367-642 3-254 (321)
132 cd05065 PTKc_EphR_B Catalytic 100.0 3.4E-35 7.3E-40 302.6 20.8 247 360-646 6-268 (269)
133 cd05069 PTKc_Yes Catalytic dom 100.0 7.1E-35 1.5E-39 298.8 23.1 244 360-645 8-259 (260)
134 cd05061 PTKc_InsR Catalytic do 100.0 4.6E-35 1E-39 305.0 22.0 254 359-649 7-281 (288)
135 cd05032 PTKc_InsR_like Catalyt 100.0 3.2E-35 6.9E-40 303.9 20.4 243 366-644 13-276 (277)
136 cd07862 STKc_CDK6 Catalytic do 100.0 2.3E-35 4.9E-40 307.3 19.5 255 360-641 3-286 (290)
137 cd05592 STKc_nPKC_theta_delta 100.0 2.6E-35 5.6E-40 311.4 20.1 231 366-640 2-246 (316)
138 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.5E-35 7.5E-40 314.0 21.2 255 359-649 8-342 (343)
139 PTZ00283 serine/threonine prot 100.0 2E-35 4.4E-40 329.9 20.1 247 358-642 32-297 (496)
140 cd05570 STKc_PKC Catalytic dom 100.0 3E-35 6.5E-40 311.2 20.2 232 367-642 3-252 (318)
141 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.8E-35 1E-39 307.3 21.5 257 360-642 7-288 (303)
142 cd05619 STKc_nPKC_theta Cataly 100.0 4.6E-35 1E-39 309.5 21.5 232 366-641 2-247 (316)
143 cd05589 STKc_PKN Catalytic dom 100.0 2E-35 4.3E-40 313.4 18.7 231 367-642 7-257 (324)
144 cd05083 PTKc_Chk Catalytic dom 100.0 3.8E-35 8.2E-40 299.6 20.1 241 359-645 7-253 (254)
145 cd05097 PTKc_DDR_like Catalyti 100.0 7.6E-35 1.7E-39 304.5 22.8 256 359-644 6-294 (295)
146 cd05590 STKc_nPKC_eta Catalyti 100.0 2.2E-35 4.7E-40 312.6 18.8 226 367-636 3-241 (320)
147 cd05588 STKc_aPKC Catalytic do 100.0 2.4E-35 5.1E-40 313.5 19.1 239 367-642 3-262 (329)
148 cd05051 PTKc_DDR Catalytic dom 100.0 9E-35 1.9E-39 303.6 23.1 255 360-644 7-295 (296)
149 cd06625 STKc_MEKK3_like Cataly 100.0 7.3E-35 1.6E-39 298.6 21.9 243 360-642 4-260 (263)
150 cd05092 PTKc_TrkA Catalytic do 100.0 6.5E-35 1.4E-39 302.7 21.7 244 366-645 12-280 (280)
151 cd05620 STKc_nPKC_delta Cataly 100.0 3.4E-35 7.4E-40 310.5 19.9 230 367-640 3-246 (316)
152 KOG0200 Fibroblast/platelet-de 100.0 2.3E-35 5E-40 335.7 19.7 249 366-648 303-581 (609)
153 cd05112 PTKc_Itk Catalytic dom 100.0 5.3E-35 1.2E-39 298.6 20.5 238 366-644 11-256 (256)
154 cd05618 STKc_aPKC_iota Catalyt 100.0 2.4E-35 5.3E-40 313.4 18.6 239 367-642 3-262 (329)
155 KOG1989 ARK protein kinase fam 100.0 2.4E-35 5.1E-40 326.9 19.1 250 367-650 45-315 (738)
156 cd05034 PTKc_Src_like Catalyti 100.0 9E-35 2E-39 297.8 21.8 246 359-645 7-260 (261)
157 PHA03211 serine/threonine kina 100.0 1.5E-33 3.2E-38 310.6 32.9 261 360-642 171-455 (461)
158 cd05044 PTKc_c-ros Catalytic d 100.0 4.9E-35 1.1E-39 301.1 19.7 243 367-645 3-269 (269)
159 cd05605 STKc_GRK4_like Catalyt 100.0 6.2E-35 1.3E-39 303.8 20.4 237 367-642 8-261 (285)
160 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 8.5E-35 1.8E-39 301.0 21.2 231 366-644 2-274 (274)
161 cd05575 STKc_SGK Catalytic dom 100.0 3.3E-35 7.1E-40 311.6 18.2 227 367-637 3-242 (323)
162 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7.1E-35 1.5E-39 302.9 20.3 257 366-646 11-283 (284)
163 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.7E-34 3.7E-39 296.7 22.9 230 366-643 2-261 (262)
164 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.2E-35 2.6E-40 318.1 14.9 244 366-642 8-285 (350)
165 cd05050 PTKc_Musk Catalytic do 100.0 1E-34 2.2E-39 302.2 21.5 244 366-645 12-288 (288)
166 KOG0580 Serine/threonine prote 100.0 1.4E-35 3.1E-40 282.0 13.5 242 356-642 20-273 (281)
167 cd05614 STKc_MSK2_N N-terminal 100.0 2.6E-35 5.5E-40 313.5 17.0 238 366-642 7-267 (332)
168 cd05041 PTKc_Fes_like Catalyti 100.0 1.6E-34 3.5E-39 294.1 22.1 239 366-644 2-250 (251)
169 cd05095 PTKc_DDR2 Catalytic do 100.0 1.8E-34 4E-39 301.7 23.1 257 359-645 6-296 (296)
170 cd00192 PTKc Catalytic domain 100.0 1.4E-34 3.1E-39 295.2 21.7 243 366-644 2-262 (262)
171 cd05602 STKc_SGK1 Catalytic do 100.0 3.1E-35 6.8E-40 312.0 17.4 230 367-640 3-245 (325)
172 PTZ00036 glycogen synthase kin 100.0 4.5E-35 9.7E-40 323.1 19.2 264 359-648 67-359 (440)
173 KOG0660 Mitogen-activated prot 100.0 1.6E-35 3.5E-40 298.0 14.2 257 366-648 29-318 (359)
174 cd05603 STKc_SGK2 Catalytic do 100.0 3.2E-35 7E-40 311.3 17.4 227 367-637 3-242 (321)
175 cd05599 STKc_NDR_like Catalyti 100.0 2.3E-35 5.1E-40 317.9 16.4 243 367-642 9-296 (364)
176 cd05596 STKc_ROCK Catalytic do 100.0 2.6E-35 5.5E-40 318.2 16.7 243 359-642 44-304 (370)
177 KOG0589 Serine/threonine prote 100.0 1.6E-35 3.4E-40 311.6 14.5 242 359-642 5-258 (426)
178 PRK13184 pknD serine/threonine 100.0 1.3E-34 2.8E-39 332.9 23.2 268 360-656 4-300 (932)
179 cd05040 PTKc_Ack_like Catalyti 100.0 1.3E-34 2.8E-39 296.0 20.8 240 367-644 3-256 (257)
180 cd05617 STKc_aPKC_zeta Catalyt 100.0 6.8E-35 1.5E-39 309.7 19.5 233 367-636 3-248 (327)
181 cd05587 STKc_cPKC Catalytic do 100.0 6.3E-35 1.4E-39 309.5 19.1 226 367-636 8-246 (324)
182 cd05601 STKc_CRIK Catalytic do 100.0 1.7E-35 3.6E-40 314.7 14.6 238 366-642 8-263 (330)
183 cd05626 STKc_LATS2 Catalytic d 100.0 6.3E-35 1.4E-39 316.6 19.3 245 366-642 8-305 (381)
184 cd05073 PTKc_Hck Catalytic dom 100.0 1.7E-34 3.6E-39 296.0 21.3 245 360-646 8-260 (260)
185 KOG2345 Serine/threonine prote 100.0 9.1E-36 2E-40 284.4 10.8 262 358-647 21-301 (302)
186 cd05628 STKc_NDR1 Catalytic do 100.0 8.6E-35 1.9E-39 313.5 19.6 245 366-642 8-293 (363)
187 cd05057 PTKc_EGFR_like Catalyt 100.0 2.9E-34 6.2E-39 297.5 22.8 250 360-651 9-273 (279)
188 cd06654 STKc_PAK1 Catalytic do 100.0 2.7E-34 5.9E-39 300.7 22.7 235 366-642 27-270 (296)
189 cd07868 STKc_CDK8 Catalytic do 100.0 2.3E-34 5.1E-39 303.9 22.2 198 360-573 2-219 (317)
190 cd06646 STKc_MAP4K5 Catalytic 100.0 2.1E-34 4.5E-39 296.3 21.3 245 359-643 10-266 (267)
191 cd08219 STKc_Nek3 Catalytic do 100.0 1.4E-34 3E-39 295.4 19.8 236 366-642 7-252 (255)
192 cd06615 PKc_MEK Catalytic doma 100.0 1.9E-34 4.1E-39 303.6 21.4 252 366-643 8-288 (308)
193 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1E-34 2.2E-39 300.9 19.0 258 366-647 11-284 (284)
194 cd05616 STKc_cPKC_beta Catalyt 100.0 8.6E-35 1.9E-39 308.3 18.6 226 367-636 8-246 (323)
195 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.3E-34 4.9E-39 297.9 21.2 238 360-642 6-253 (277)
196 cd06637 STKc_TNIK Catalytic do 100.0 2.7E-34 5.8E-39 296.2 21.5 242 359-641 7-268 (272)
197 PHA03207 serine/threonine kina 100.0 2.2E-34 4.7E-39 313.5 21.6 259 360-642 94-375 (392)
198 cd06612 STKc_MST1_2 Catalytic 100.0 6.5E-34 1.4E-38 290.2 23.5 242 359-641 4-252 (256)
199 cd05604 STKc_SGK3 Catalytic do 100.0 5.7E-35 1.2E-39 310.0 16.2 230 366-639 2-244 (325)
200 cd07861 STKc_CDK1_euk Catalyti 100.0 3.9E-34 8.5E-39 297.0 22.1 252 366-641 7-281 (285)
201 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.1E-34 8.8E-39 293.9 21.8 239 366-641 7-263 (267)
202 cd05110 PTKc_HER4 Catalytic do 100.0 3.9E-34 8.4E-39 300.5 21.9 244 366-650 14-272 (303)
203 cd05621 STKc_ROCK2 Catalytic d 100.0 7.3E-35 1.6E-39 314.5 16.7 242 360-642 45-304 (370)
204 cd05629 STKc_NDR_like_fungal C 100.0 7.4E-35 1.6E-39 315.6 16.8 244 366-642 8-305 (377)
205 cd06640 STKc_MST4 Catalytic do 100.0 1E-33 2.2E-38 293.1 24.5 233 366-642 11-253 (277)
206 PHA03209 serine/threonine kina 100.0 6.9E-34 1.5E-38 305.7 23.9 258 360-642 68-351 (357)
207 cd06631 STKc_YSK4 Catalytic do 100.0 3.9E-34 8.4E-39 293.9 21.1 240 367-641 8-261 (265)
208 cd07867 STKc_CDC2L6 Catalytic 100.0 3.6E-34 7.9E-39 302.2 21.0 198 360-573 2-219 (317)
209 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-34 3.1E-39 312.8 18.2 251 366-642 7-288 (372)
210 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.9E-34 4.1E-39 295.4 18.0 231 366-643 2-257 (258)
211 cd05056 PTKc_FAK Catalytic dom 100.0 6.5E-34 1.4E-38 293.2 22.1 242 366-649 13-268 (270)
212 cd08227 PK_STRAD_alpha Pseudok 100.0 9.4E-34 2E-38 300.9 24.0 261 366-642 5-307 (327)
213 cd07839 STKc_CDK5 Catalytic do 100.0 3.5E-34 7.6E-39 297.3 20.2 250 367-641 8-280 (284)
214 cd06619 PKc_MKK5 Catalytic dom 100.0 4.9E-34 1.1E-38 295.9 21.3 234 367-642 9-253 (279)
215 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.7E-34 1E-38 300.6 21.4 256 360-642 8-286 (309)
216 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 6.1E-34 1.3E-38 295.9 22.0 249 360-643 7-267 (284)
217 cd06643 STKc_SLK Catalytic dom 100.0 9E-34 1.9E-38 294.2 23.1 237 366-642 12-262 (282)
218 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.2E-33 2.5E-38 291.3 23.7 246 366-644 2-267 (268)
219 cd08528 STKc_Nek10 Catalytic d 100.0 8E-34 1.7E-38 292.3 21.8 245 360-644 2-268 (269)
220 cd05630 STKc_GRK6 Catalytic do 100.0 4E-34 8.7E-39 297.7 19.8 237 367-642 8-261 (285)
221 cd05632 STKc_GRK5 Catalytic do 100.0 8.4E-34 1.8E-38 295.2 22.2 237 367-642 8-261 (285)
222 cd05074 PTKc_Tyro3 Catalytic d 100.0 9.2E-34 2E-38 292.3 22.1 245 366-646 6-272 (273)
223 cd05625 STKc_LATS1 Catalytic d 100.0 2.8E-34 6E-39 311.7 18.7 244 366-642 8-305 (382)
224 cd06651 STKc_MEKK3 Catalytic d 100.0 9.6E-34 2.1E-38 291.4 21.7 241 360-641 4-260 (266)
225 cd06655 STKc_PAK2 Catalytic do 100.0 1E-33 2.3E-38 296.3 22.3 240 360-642 21-269 (296)
226 cd05615 STKc_cPKC_alpha Cataly 100.0 4E-34 8.7E-39 303.2 19.1 226 367-636 8-246 (323)
227 cd06645 STKc_MAP4K3 Catalytic 100.0 1.4E-33 3E-38 290.1 22.2 243 359-641 10-264 (267)
228 cd06656 STKc_PAK3 Catalytic do 100.0 9.5E-34 2.1E-38 296.7 21.3 241 359-642 20-269 (297)
229 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.4E-33 3.1E-38 292.7 22.5 253 366-641 8-282 (286)
230 cd07876 STKc_JNK2 Catalytic do 100.0 4.9E-34 1.1E-38 307.1 19.6 254 358-642 21-315 (359)
231 cd05623 STKc_MRCK_alpha Cataly 100.0 5.3E-34 1.1E-38 303.5 19.4 240 366-642 8-266 (332)
232 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.2E-33 2.5E-38 288.8 21.2 229 366-643 2-258 (259)
233 cd05598 STKc_LATS Catalytic do 100.0 1.9E-34 4.1E-39 312.3 16.2 244 366-642 8-301 (376)
234 cd06609 STKc_MST3_like Catalyt 100.0 1.6E-33 3.5E-38 290.9 22.3 239 360-642 3-251 (274)
235 KOG0667 Dual-specificity tyros 100.0 3.1E-34 6.6E-39 308.9 17.4 255 359-642 187-502 (586)
236 cd07873 STKc_PCTAIRE1 Catalyti 100.0 9.2E-34 2E-38 297.2 20.6 257 358-642 6-286 (301)
237 cd06624 STKc_ASK Catalytic dom 100.0 1.6E-33 3.5E-38 289.9 21.9 237 366-642 15-265 (268)
238 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.5E-33 3.2E-38 290.7 21.5 241 366-642 8-269 (272)
239 cd08223 STKc_Nek4 Catalytic do 100.0 1.2E-33 2.6E-38 288.6 20.6 235 367-642 8-254 (257)
240 cd05586 STKc_Sck1_like Catalyt 100.0 1.6E-34 3.5E-39 307.1 14.7 232 367-641 1-252 (330)
241 PF00069 Pkinase: Protein kina 100.0 1.1E-33 2.3E-38 289.1 20.2 238 367-641 7-256 (260)
242 cd07863 STKc_CDK4 Catalytic do 100.0 8E-34 1.7E-38 295.3 19.1 250 366-641 7-284 (288)
243 KOG0599 Phosphorylase kinase g 100.0 1.5E-34 3.3E-39 278.8 12.6 233 367-642 25-283 (411)
244 cd05046 PTK_CCK4 Pseudokinase 100.0 1.4E-33 3E-38 291.4 20.8 243 366-644 12-274 (275)
245 cd05622 STKc_ROCK1 Catalytic d 100.0 4.1E-34 8.8E-39 308.9 17.5 245 358-643 43-305 (371)
246 cd06652 STKc_MEKK2 Catalytic d 100.0 1.9E-33 4.1E-38 288.9 21.5 242 360-642 4-261 (265)
247 PTZ00284 protein kinase; Provi 100.0 1.3E-33 2.7E-38 314.5 21.8 253 359-642 130-438 (467)
248 cd08221 STKc_Nek9 Catalytic do 100.0 1.9E-33 4.2E-38 287.1 21.1 236 367-643 8-254 (256)
249 cd06611 STKc_SLK_like Catalyti 100.0 2.7E-33 5.8E-38 290.2 22.5 243 359-642 6-262 (280)
250 cd06613 STKc_MAP4K3_like Catal 100.0 3.4E-33 7.3E-38 285.9 22.8 243 360-641 5-259 (262)
251 cd06644 STKc_STK10_LOK Catalyt 100.0 4.9E-33 1.1E-37 290.3 24.2 243 359-642 13-269 (292)
252 cd07875 STKc_JNK1 Catalytic do 100.0 1.5E-33 3.3E-38 303.8 20.9 254 358-642 24-318 (364)
253 cd08218 STKc_Nek1 Catalytic do 100.0 1.3E-33 2.7E-38 288.4 19.1 236 366-642 7-253 (256)
254 cd05627 STKc_NDR2 Catalytic do 100.0 3.6E-34 7.7E-39 308.3 15.8 243 367-642 9-293 (360)
255 cd07874 STKc_JNK3 Catalytic do 100.0 7.3E-34 1.6E-38 305.2 18.1 254 358-642 17-311 (355)
256 cd06638 STKc_myosinIIIA Cataly 100.0 2.5E-33 5.3E-38 291.3 21.4 247 359-643 19-284 (286)
257 cd08217 STKc_Nek2 Catalytic do 100.0 2E-33 4.4E-38 287.5 20.3 238 366-642 7-262 (265)
258 cd06658 STKc_PAK5 Catalytic do 100.0 1.9E-33 4.2E-38 293.7 20.4 235 366-642 29-272 (292)
259 cd06630 STKc_MEKK1 Catalytic d 100.0 2.4E-33 5.2E-38 288.2 20.6 241 366-641 7-263 (268)
260 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.9E-33 8.5E-38 289.9 22.3 238 366-642 8-262 (286)
261 KOG0033 Ca2+/calmodulin-depend 100.0 4.6E-35 1E-39 278.5 6.7 241 359-641 12-266 (355)
262 cd06639 STKc_myosinIIIB Cataly 100.0 3.7E-33 8.1E-38 290.9 21.8 246 359-642 23-287 (291)
263 smart00219 TyrKc Tyrosine kina 100.0 3.3E-33 7.2E-38 284.9 21.0 238 366-643 6-258 (258)
264 cd05624 STKc_MRCK_beta Catalyt 100.0 1.2E-33 2.6E-38 300.6 18.4 240 366-642 8-266 (331)
265 cd08220 STKc_Nek8 Catalytic do 100.0 2E-33 4.4E-38 286.5 19.3 234 367-642 8-253 (256)
266 KOG0584 Serine/threonine prote 100.0 6.1E-34 1.3E-38 303.7 15.8 241 358-642 40-296 (632)
267 cd05597 STKc_DMPK_like Catalyt 100.0 1.4E-33 3E-38 300.2 18.4 240 366-642 8-266 (331)
268 cd06641 STKc_MST3 Catalytic do 100.0 3.8E-33 8.2E-38 288.9 21.1 233 366-642 11-253 (277)
269 cd05572 STKc_cGK_PKG Catalytic 100.0 4.3E-33 9.2E-38 285.7 21.0 244 367-654 1-261 (262)
270 cd06659 STKc_PAK6 Catalytic do 100.0 3.2E-33 6.9E-38 292.7 20.5 236 365-642 27-271 (297)
271 cd05579 STKc_MAST_like Catalyt 100.0 2.2E-33 4.7E-38 287.3 18.7 251 367-653 1-265 (265)
272 cd07833 STKc_CDKL Catalytic do 100.0 4.7E-33 1E-37 289.2 20.9 250 367-641 9-284 (288)
273 cd06632 STKc_MEKK1_plant Catal 100.0 4.7E-33 1E-37 284.0 20.5 232 367-641 8-254 (258)
274 cd05574 STKc_phototropin_like 100.0 6.3E-33 1.4E-37 292.8 22.0 244 366-641 8-288 (316)
275 cd07841 STKc_CDK7 Catalytic do 100.0 4E-33 8.7E-38 291.6 20.0 251 366-642 7-282 (298)
276 cd06607 STKc_TAO Catalytic dom 100.0 9.3E-33 2E-37 290.5 22.8 236 360-642 17-267 (307)
277 cd06605 PKc_MAPKK Catalytic do 100.0 5.8E-33 1.3E-37 284.9 20.6 243 360-642 3-257 (265)
278 KOG0032 Ca2+/calmodulin-depend 100.0 1E-32 2.3E-37 294.2 23.2 242 358-642 35-293 (382)
279 KOG4717 Serine/threonine prote 100.0 2.5E-33 5.4E-38 290.1 17.5 239 358-641 18-269 (864)
280 cd07860 STKc_CDK2_3 Catalytic 100.0 8E-33 1.7E-37 287.1 21.5 250 367-642 8-281 (284)
281 cd05609 STKc_MAST Catalytic do 100.0 4.8E-33 1E-37 292.4 20.1 257 366-655 8-283 (305)
282 KOG4279 Serine/threonine prote 100.0 3.4E-34 7.3E-39 305.0 11.2 238 365-642 581-832 (1226)
283 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.9E-33 6.3E-38 290.6 18.1 251 366-642 8-283 (286)
284 cd06917 STKc_NAK1_like Catalyt 100.0 1.3E-32 2.8E-37 284.5 22.5 239 360-642 3-255 (277)
285 cd06636 STKc_MAP4K4_6 Catalyti 100.0 6.7E-33 1.5E-37 287.5 20.4 243 358-641 16-278 (282)
286 cd08226 PK_STRAD_beta Pseudoki 100.0 1.1E-32 2.4E-37 292.8 22.5 267 366-648 5-316 (328)
287 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.2E-32 2.5E-37 282.6 21.9 244 367-642 9-264 (267)
288 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.5E-33 7.5E-38 298.5 18.3 257 358-646 15-304 (343)
289 cd07843 STKc_CDC2L1 Catalytic 100.0 1.5E-32 3.2E-37 286.7 22.5 257 358-641 5-289 (293)
290 cd07844 STKc_PCTAIRE_like Cata 100.0 8.9E-33 1.9E-37 288.0 20.7 257 359-641 6-287 (291)
291 PTZ00266 NIMA-related protein 100.0 4.6E-33 9.9E-38 321.3 20.3 245 359-641 14-294 (1021)
292 cd07832 STKc_CCRK Catalytic do 100.0 1E-32 2.2E-37 286.4 20.8 252 366-642 7-282 (286)
293 cd06635 STKc_TAO1 Catalytic do 100.0 2.3E-32 5.1E-37 288.9 23.9 237 366-648 32-283 (317)
294 KOG0577 Serine/threonine prote 100.0 6.7E-34 1.4E-38 298.5 11.8 234 362-641 28-277 (948)
295 cd06608 STKc_myosinIII_like Ca 100.0 9.8E-33 2.1E-37 284.2 20.3 245 359-641 7-271 (275)
296 cd06626 STKc_MEKK4 Catalytic d 100.0 1.3E-32 2.8E-37 282.0 21.0 240 366-641 7-260 (264)
297 cd05633 STKc_GRK3 Catalytic do 100.0 1.4E-32 3.1E-37 285.1 21.5 233 367-642 2-255 (279)
298 cd07835 STKc_CDK1_like Catalyt 100.0 1.3E-32 2.9E-37 285.3 21.3 250 367-642 7-280 (283)
299 cd06647 STKc_PAK_I Catalytic d 100.0 1.3E-32 2.8E-37 287.6 21.1 241 359-642 20-269 (293)
300 cd05580 STKc_PKA Catalytic dom 100.0 1E-32 2.2E-37 287.8 20.0 235 360-642 3-254 (290)
301 cd07842 STKc_CDK8_like Catalyt 100.0 9E-33 2E-37 291.2 19.8 260 367-642 8-313 (316)
302 cd05611 STKc_Rim15_like Cataly 100.0 1.6E-32 3.5E-37 281.0 20.9 244 367-654 4-260 (260)
303 cd08225 STKc_Nek5 Catalytic do 100.0 6.9E-33 1.5E-37 282.8 17.9 235 367-642 8-254 (257)
304 cd06614 STKc_PAK Catalytic dom 100.0 2.9E-32 6.4E-37 283.4 23.0 243 359-642 20-270 (286)
305 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.2E-32 4.8E-37 285.1 21.8 257 359-641 6-287 (291)
306 cd07837 STKc_CdkB_plant Cataly 100.0 1.5E-32 3.2E-37 286.8 20.5 253 367-641 9-290 (295)
307 KOG0666 Cyclin C-dependent kin 100.0 6.7E-34 1.4E-38 279.0 9.5 272 354-642 20-337 (438)
308 cd06648 STKc_PAK_II Catalytic 100.0 2.8E-32 6.1E-37 283.8 22.4 234 366-641 26-268 (285)
309 cd06616 PKc_MKK4 Catalytic dom 100.0 1.8E-32 4E-37 285.2 20.9 242 366-642 11-267 (288)
310 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 4.5E-32 9.6E-37 282.4 23.4 245 366-642 8-266 (287)
311 cd07836 STKc_Pho85 Catalytic d 100.0 3.7E-32 7.9E-37 282.0 22.5 250 366-641 7-280 (284)
312 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.9E-32 4.1E-37 284.1 20.3 238 366-642 8-261 (283)
313 cd05583 STKc_MSK_N N-terminal 100.0 1.1E-32 2.4E-37 286.9 18.5 250 367-655 8-276 (288)
314 PHA03210 serine/threonine kina 100.0 2.4E-32 5.2E-37 305.9 21.7 266 358-642 148-454 (501)
315 cd08216 PK_STRAD Pseudokinase 100.0 3.3E-32 7.2E-37 287.0 21.5 254 380-642 16-295 (314)
316 cd06623 PKc_MAPKK_plant_like C 100.0 4.5E-32 9.7E-37 277.8 21.5 237 366-642 8-256 (264)
317 cd07831 STKc_MOK Catalytic dom 100.0 7.4E-32 1.6E-36 279.3 23.3 249 366-642 6-279 (282)
318 cd08530 STKc_CNK2-like Catalyt 100.0 1.8E-32 4E-37 279.3 18.4 236 366-642 7-253 (256)
319 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.2E-32 1.1E-36 278.2 21.5 241 360-641 4-260 (264)
320 cd06657 STKc_PAK4 Catalytic do 100.0 6.5E-32 1.4E-36 282.2 22.3 236 365-642 26-270 (292)
321 cd08215 STKc_Nek Catalytic dom 100.0 4.2E-32 9.2E-37 276.3 20.2 237 367-642 8-255 (258)
322 cd07840 STKc_CDK9_like Catalyt 100.0 3.1E-32 6.7E-37 282.5 19.5 252 366-642 6-284 (287)
323 cd05577 STKc_GRK Catalytic dom 100.0 4E-32 8.6E-37 281.2 20.1 236 367-641 1-253 (277)
324 KOG0596 Dual specificity; seri 100.0 1E-32 2.2E-37 289.1 15.4 243 359-642 362-627 (677)
325 cd06606 STKc_MAPKKK Catalytic 100.0 7.1E-32 1.5E-36 274.5 21.4 237 367-642 8-257 (260)
326 cd07850 STKc_JNK Catalytic dom 100.0 6.1E-32 1.3E-36 290.1 21.7 254 358-642 16-311 (353)
327 cd07852 STKc_MAPK15 Catalytic 100.0 9.4E-32 2E-36 286.7 22.8 263 359-646 8-301 (337)
328 PHA03390 pk1 serine/threonine- 100.0 6.1E-32 1.3E-36 278.6 20.6 232 366-641 23-261 (267)
329 cd07865 STKc_CDK9 Catalytic do 100.0 4.8E-32 1E-36 284.7 20.1 266 357-642 11-307 (310)
330 cd05578 STKc_Yank1 Catalytic d 100.0 1.9E-32 4.1E-37 280.2 16.5 233 366-640 7-253 (258)
331 cd05606 STKc_beta_ARK Catalyti 100.0 1.1E-31 2.3E-36 278.4 22.3 243 367-655 2-265 (278)
332 cd07845 STKc_CDK10 Catalytic d 100.0 1.2E-31 2.5E-36 282.3 22.4 258 358-642 7-290 (309)
333 PLN00009 cyclin-dependent kina 100.0 8E-32 1.7E-36 281.3 20.5 256 360-642 4-284 (294)
334 KOG0574 STE20-like serine/thre 100.0 1.5E-33 3.4E-38 274.8 6.9 243 359-642 34-283 (502)
335 cd07830 STKc_MAK_like Catalyti 100.0 6.5E-32 1.4E-36 280.0 19.4 251 366-642 6-280 (283)
336 cd05122 PKc_STE Catalytic doma 100.0 1.1E-31 2.4E-36 271.9 20.4 236 366-642 7-251 (253)
337 cd06633 STKc_TAO3 Catalytic do 100.0 2.1E-31 4.6E-36 281.1 22.9 231 366-642 28-273 (313)
338 cd08222 STKc_Nek11 Catalytic d 100.0 5.7E-32 1.2E-36 277.0 17.9 242 360-642 2-257 (260)
339 cd07849 STKc_ERK1_2_like Catal 100.0 4.5E-32 9.8E-37 289.1 17.7 261 360-647 7-299 (336)
340 cd05613 STKc_MSK1_N N-terminal 100.0 1E-31 2.2E-36 279.9 19.8 238 366-642 7-268 (290)
341 PHA02882 putative serine/threo 100.0 2.1E-31 4.6E-36 278.6 22.1 254 359-643 13-293 (294)
342 cd06634 STKc_TAO2 Catalytic do 100.0 2.3E-31 5E-36 280.1 22.4 233 366-644 22-269 (308)
343 KOG0579 Ste20-like serine/thre 100.0 1.1E-32 2.3E-37 290.8 11.3 237 366-642 39-289 (1187)
344 PTZ00024 cyclin-dependent prot 100.0 3.6E-31 7.9E-36 281.9 23.3 257 366-642 16-313 (335)
345 cd07864 STKc_CDK12 Catalytic d 100.0 1.6E-31 3.4E-36 280.0 20.1 256 359-642 8-299 (302)
346 cd06618 PKc_MKK7 Catalytic dom 100.0 1.1E-31 2.4E-36 280.7 18.9 241 360-642 17-273 (296)
347 cd06627 STKc_Cdc7_like Catalyt 100.0 2.3E-31 5.1E-36 270.6 20.4 233 366-641 7-250 (254)
348 cd07838 STKc_CDK4_6_like Catal 100.0 2.9E-31 6.3E-36 275.4 21.2 249 367-641 7-283 (287)
349 KOG4645 MAPKKK (MAP kinase kin 100.0 3.5E-33 7.6E-38 316.5 6.9 239 366-642 1242-1494(1509)
350 cd05123 STKc_AGC Catalytic dom 100.0 2.1E-31 4.6E-36 270.6 19.1 228 367-638 1-240 (250)
351 KOG0586 Serine/threonine prote 100.0 6.1E-32 1.3E-36 288.2 15.2 238 359-642 57-306 (596)
352 cd07866 STKc_BUR1 Catalytic do 100.0 4E-31 8.7E-36 277.8 21.2 265 358-641 8-307 (311)
353 cd07855 STKc_ERK5 Catalytic do 100.0 2.3E-31 5E-36 283.4 19.5 259 360-642 7-294 (334)
354 cd05581 STKc_PDK1 Catalytic do 100.0 1.3E-31 2.9E-36 276.7 17.0 240 366-641 8-276 (280)
355 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.6E-31 5.7E-36 283.4 19.7 261 360-649 7-300 (337)
356 cd05576 STKc_RPK118_like Catal 100.0 2.8E-31 6E-36 268.6 18.1 215 380-638 7-225 (237)
357 cd05118 STKc_CMGC Catalytic do 100.0 4.4E-31 9.4E-36 273.5 19.5 249 366-641 6-279 (283)
358 cd07834 STKc_MAPK Catalytic do 100.0 2E-31 4.3E-36 283.2 17.3 260 366-649 7-298 (330)
359 cd07829 STKc_CDK_like Catalyti 100.0 3.8E-31 8.2E-36 273.8 19.0 249 366-641 6-278 (282)
360 KOG0986 G protein-coupled rece 100.0 4.4E-32 9.6E-37 278.1 11.3 233 366-637 192-436 (591)
361 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.3E-30 4.9E-35 275.1 24.3 252 359-642 11-288 (328)
362 KOG0690 Serine/threonine prote 100.0 9.1E-32 2E-36 265.1 12.4 252 358-654 168-433 (516)
363 KOG4250 TANK binding protein k 100.0 1.4E-31 3E-36 289.0 14.0 263 366-649 20-313 (732)
364 cd07857 STKc_MPK1 Catalytic do 100.0 1.8E-30 3.9E-35 276.3 20.8 252 367-642 8-292 (332)
365 cd07879 STKc_p38delta_MAPK13 C 100.0 1E-30 2.2E-35 279.5 18.7 257 359-649 16-306 (342)
366 cd05610 STKc_MASTL Catalytic d 100.0 1.6E-30 3.5E-35 300.2 21.2 136 359-510 5-152 (669)
367 KOG1035 eIF-2alpha kinase GCN2 100.0 1.2E-30 2.5E-35 294.9 18.1 246 361-641 480-870 (1351)
368 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.5E-30 9.8E-35 274.5 21.4 256 360-648 17-306 (343)
369 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.4E-30 5.1E-35 276.6 18.6 258 360-642 7-300 (342)
370 KOG0607 MAP kinase-interacting 100.0 3.8E-31 8.3E-36 260.4 11.3 262 358-641 77-360 (463)
371 KOG0983 Mitogen-activated prot 100.0 9.9E-31 2.2E-35 252.7 13.6 236 367-642 100-349 (391)
372 cd07877 STKc_p38alpha_MAPK14 C 100.0 6.4E-30 1.4E-34 273.6 20.9 251 359-642 18-300 (345)
373 cd07851 STKc_p38 Catalytic dom 100.0 1.9E-30 4.2E-35 277.4 16.7 252 359-642 16-298 (343)
374 KOG0671 LAMMER dual specificit 100.0 7.3E-31 1.6E-35 265.2 12.1 256 358-642 89-406 (415)
375 KOG0603 Ribosomal protein S6 k 100.0 1.9E-30 4.2E-35 278.2 14.1 234 359-642 323-563 (612)
376 KOG0696 Serine/threonine prote 100.0 1.6E-30 3.6E-35 263.1 12.6 233 358-635 349-594 (683)
377 smart00220 S_TKc Serine/Threon 100.0 1.8E-29 3.9E-34 253.8 19.8 227 380-641 3-240 (244)
378 KOG0604 MAP kinase-activated p 100.0 2.8E-30 6E-35 252.7 11.7 245 359-642 62-322 (400)
379 KOG0662 Cyclin-dependent kinas 100.0 1.6E-29 3.5E-34 230.3 14.6 251 366-642 9-283 (292)
380 KOG1027 Serine/threonine prote 100.0 1E-29 2.2E-34 278.1 16.0 245 360-641 511-766 (903)
381 KOG0669 Cyclin T-dependent kin 100.0 4.2E-31 9E-36 252.5 4.4 252 366-642 24-315 (376)
382 KOG1151 Tousled-like protein k 100.0 7E-30 1.5E-34 260.4 11.5 246 367-641 471-740 (775)
383 KOG0587 Traf2- and Nck-interac 100.0 3.1E-29 6.6E-34 275.6 16.7 244 359-642 20-282 (953)
384 KOG4236 Serine/threonine prote 100.0 5.7E-30 1.2E-34 265.8 9.8 237 363-641 568-818 (888)
385 KOG1006 Mitogen-activated prot 100.0 7.4E-31 1.6E-35 252.8 2.8 243 366-642 71-327 (361)
386 PLN03225 Serine/threonine-prot 100.0 7.1E-29 1.5E-33 280.0 17.3 259 358-642 132-450 (566)
387 KOG0612 Rho-associated, coiled 100.0 3E-29 6.5E-34 281.4 12.8 243 367-654 83-347 (1317)
388 KOG0614 cGMP-dependent protein 100.0 1.1E-29 2.4E-34 263.1 8.4 246 367-655 428-687 (732)
389 PLN03224 probable serine/threo 100.0 6.3E-28 1.4E-32 266.0 19.4 259 358-642 145-500 (507)
390 KOG0695 Serine/threonine prote 99.9 7.6E-28 1.7E-32 238.0 11.4 228 367-635 258-503 (593)
391 KOG0664 Nemo-like MAPK-related 99.9 4.7E-29 1E-33 240.7 2.0 252 366-643 60-344 (449)
392 KOG0608 Warts/lats-like serine 99.9 2.5E-27 5.4E-32 250.9 14.6 196 367-577 637-878 (1034)
393 cd00180 PKc Catalytic domain o 99.9 2.9E-26 6.4E-31 224.4 20.5 203 367-643 1-215 (215)
394 KOG0670 U4/U6-associated splic 99.9 2.2E-27 4.7E-32 246.8 8.8 253 367-642 440-746 (752)
395 KOG0668 Casein kinase II, alph 99.9 2.1E-26 4.6E-31 217.6 12.6 255 358-642 38-322 (338)
396 KOG0984 Mitogen-activated prot 99.9 8.2E-27 1.8E-31 217.4 9.0 187 366-572 53-254 (282)
397 KOG0665 Jun-N-terminal kinase 99.9 1.4E-26 3.1E-31 229.1 10.9 232 388-642 40-310 (369)
398 KOG1290 Serine/threonine prote 99.9 1.2E-25 2.7E-30 233.0 17.2 122 360-495 80-221 (590)
399 PLN00181 protein SPA1-RELATED; 99.9 5.6E-26 1.2E-30 268.5 9.4 205 408-642 26-265 (793)
400 KOG1152 Signal transduction se 99.9 8.5E-26 1.8E-30 237.9 9.2 181 366-571 568-770 (772)
401 smart00750 KIND kinase non-cat 99.9 7.3E-25 1.6E-29 210.9 14.0 169 439-648 1-171 (176)
402 smart00221 STYKc Protein kinas 99.9 5.1E-24 1.1E-28 212.1 18.2 186 366-572 6-202 (225)
403 PRK06347 autolysin; Reviewed 99.9 9E-24 1.9E-28 233.5 15.2 171 61-240 405-592 (592)
404 KOG0576 Mitogen-activated prot 99.9 5.5E-25 1.2E-29 235.4 4.9 236 366-641 22-270 (829)
405 KOG0195 Integrin-linked kinase 99.9 1.7E-24 3.8E-29 209.1 7.6 230 380-647 204-447 (448)
406 KOG1345 Serine/threonine kinas 99.9 1.1E-23 2.4E-28 203.9 10.5 244 358-643 24-285 (378)
407 KOG1167 Serine/threonine prote 99.9 1E-23 2.2E-28 216.5 10.8 259 366-642 43-381 (418)
408 PRK06347 autolysin; Reviewed 99.9 7.5E-23 1.6E-27 226.2 17.1 175 60-243 329-527 (592)
409 PRK10783 mltD membrane-bound l 99.8 1.2E-20 2.6E-25 205.2 16.0 168 64-243 266-450 (456)
410 KOG1164 Casein kinase (serine/ 99.8 1.5E-19 3.3E-24 191.3 22.7 260 359-650 19-301 (322)
411 KOG1165 Casein kinase (serine/ 99.8 1.6E-19 3.5E-24 179.8 18.1 254 366-648 35-301 (449)
412 PRK09188 serine/threonine prot 99.8 4.2E-20 9.1E-25 195.9 12.9 160 359-544 19-194 (365)
413 COG0515 SPS1 Serine/threonine 99.8 1.8E-18 3.9E-23 180.3 23.1 252 367-642 8-275 (384)
414 KOG1163 Casein kinase (serine/ 99.8 3.7E-19 8E-24 170.0 15.2 253 366-647 22-285 (341)
415 KOG1240 Protein kinase contain 99.8 1.7E-20 3.6E-25 210.9 6.8 246 359-643 24-292 (1431)
416 KOG1023 Natriuretic peptide re 99.8 1.2E-19 2.6E-24 195.8 12.4 221 408-650 1-228 (484)
417 KOG0590 Checkpoint kinase and 99.8 4.4E-20 9.6E-25 208.1 4.3 217 401-642 368-585 (601)
418 cd05147 RIO1_euk RIO kinase fa 99.7 5.8E-18 1.3E-22 165.0 11.5 130 366-513 4-168 (190)
419 cd05145 RIO1_like RIO kinase f 99.7 2.3E-17 4.9E-22 161.1 13.6 130 366-514 4-169 (190)
420 KOG0603 Ribosomal protein S6 k 99.7 1.5E-18 3.2E-23 187.2 5.4 220 388-654 21-252 (612)
421 PRK12274 serine/threonine prot 99.7 2.4E-17 5.3E-22 159.6 12.6 183 366-574 9-211 (218)
422 KOG4158 BRPK/PTEN-induced prot 99.7 4E-17 8.7E-22 166.1 12.7 201 412-643 274-511 (598)
423 PRK10359 lipopolysaccharide co 99.7 2.8E-17 6.1E-22 162.5 9.7 154 367-564 39-216 (232)
424 KOG1166 Mitotic checkpoint ser 99.7 1.3E-16 2.7E-21 183.7 13.0 182 366-568 705-901 (974)
425 PF14531 Kinase-like: Kinase-l 99.7 3E-16 6.6E-21 159.8 12.6 219 367-633 20-288 (288)
426 KOG1033 eIF-2alpha kinase PEK/ 99.7 2.5E-17 5.5E-22 174.5 3.8 180 427-639 329-509 (516)
427 PRK10345 hypothetical protein; 99.7 6.7E-16 1.5E-20 152.1 12.5 126 366-510 9-157 (210)
428 PRK14879 serine/threonine prot 99.6 1.1E-15 2.3E-20 151.7 13.1 126 366-511 3-143 (211)
429 TIGR03724 arch_bud32 Kae1-asso 99.6 1.6E-15 3.4E-20 149.1 12.7 123 367-512 2-139 (199)
430 PRK09605 bifunctional UGMP fam 99.6 6.7E-15 1.5E-19 166.5 13.0 123 366-512 340-477 (535)
431 smart00090 RIO RIO-like kinase 99.6 7.7E-15 1.7E-19 147.9 11.5 134 360-513 30-199 (237)
432 KOG0606 Microtubule-associated 99.6 2.2E-15 4.7E-20 170.3 7.0 225 367-654 91-324 (1205)
433 cd05144 RIO2_C RIO kinase fami 99.5 2.4E-14 5.2E-19 140.7 11.4 124 366-514 22-177 (198)
434 cd05120 APH_ChoK_like Aminogly 99.5 1.7E-13 3.6E-18 127.1 11.4 127 367-512 6-139 (155)
435 PRK10783 mltD membrane-bound l 99.5 9E-14 1.9E-18 151.6 10.9 107 61-178 343-449 (456)
436 PRK01723 3-deoxy-D-manno-octul 99.5 3.8E-13 8.3E-18 135.9 13.3 120 380-512 46-192 (239)
437 KOG1266 Protein kinase [Signal 99.4 1.3E-13 2.9E-18 137.7 5.7 207 406-642 119-331 (458)
438 cd05119 RIO RIO kinase family, 99.4 9E-13 2E-17 128.0 11.2 127 366-514 4-166 (187)
439 PRK13914 invasion associated s 99.4 1.8E-12 3.8E-17 138.7 10.4 174 62-243 28-247 (481)
440 TIGR01982 UbiB 2-polyprenylphe 99.3 1.1E-11 2.3E-16 136.1 10.8 134 364-514 122-309 (437)
441 KOG0590 Checkpoint kinase and 99.2 6.6E-13 1.4E-17 150.2 -1.2 209 403-642 69-286 (601)
442 cd05151 ChoK Choline Kinase (C 99.2 1.1E-10 2.4E-15 111.3 9.6 122 367-511 6-136 (170)
443 PF01476 LysM: LysM domain; I 99.1 5.1E-11 1.1E-15 86.6 2.8 43 197-240 1-44 (44)
444 KOG0601 Cyclin-dependent kinas 99.1 1.7E-10 3.7E-15 125.2 7.0 236 367-641 122-378 (524)
445 PRK04750 ubiB putative ubiquin 99.0 7E-10 1.5E-14 123.4 10.4 136 362-515 122-317 (537)
446 COG1388 LytE FOG: LysM repeat 99.0 2.2E-10 4.7E-15 103.6 5.1 112 76-241 1-112 (124)
447 cd05146 RIO3_euk RIO kinase fa 99.0 3.4E-09 7.4E-14 102.8 13.2 98 403-514 75-176 (197)
448 KOG1243 Protein kinase [Genera 99.0 9.7E-09 2.1E-13 112.8 15.6 157 388-566 36-199 (690)
449 cd05154 ACAD10_11_like Acyl-Co 98.9 1.2E-08 2.6E-13 101.5 11.5 133 367-512 6-207 (223)
450 KOG3741 Poly(A) ribonuclease s 98.9 1.1E-07 2.5E-12 101.4 18.3 162 380-569 290-475 (655)
451 COG3642 Mn2+-dependent serine/ 98.9 2.7E-08 5.9E-13 93.5 12.1 118 380-513 10-142 (204)
452 KOG0606 Microtubule-associated 98.8 1.9E-09 4E-14 123.0 4.5 222 407-655 857-1102(1205)
453 KOG3087 Serine/threonine prote 98.8 3.2E-08 6.9E-13 92.6 11.5 128 380-513 21-167 (229)
454 PRK15123 lipopolysaccharide co 98.8 4.2E-08 9.1E-13 100.4 13.4 126 380-511 36-194 (268)
455 TIGR02899 spore_safA spore coa 98.7 1.2E-08 2.6E-13 73.9 4.2 43 199-241 1-44 (44)
456 PF01476 LysM: LysM domain; I 98.7 6.6E-09 1.4E-13 75.4 2.8 43 130-176 1-44 (44)
457 PF01163 RIO1: RIO1 family; I 98.7 7.7E-08 1.7E-12 93.0 10.7 118 381-513 1-157 (188)
458 PRK14125 cell division suppres 98.7 2.2E-08 4.8E-13 86.1 5.6 51 194-245 36-94 (103)
459 KOG0601 Cyclin-dependent kinas 98.7 7.5E-09 1.6E-13 112.7 3.3 233 366-647 272-519 (524)
460 KOG2137 Protein kinase [Signal 98.6 1.3E-08 2.8E-13 112.3 2.1 157 466-641 106-264 (700)
461 cd00118 LysM Lysin domain, fou 98.6 6E-08 1.3E-12 70.1 5.0 45 196-240 2-46 (46)
462 PRK14125 cell division suppres 98.6 2.5E-07 5.5E-12 79.6 7.9 54 58-115 33-94 (103)
463 COG4248 Uncharacterized protei 98.4 2.1E-06 4.5E-11 89.7 12.1 205 429-649 85-303 (637)
464 PF06293 Kdo: Lipopolysacchari 98.4 3.3E-06 7.2E-11 83.4 13.2 106 400-513 57-172 (206)
465 TIGR02907 spore_VI_D stage VI 98.4 2.7E-07 5.8E-12 93.8 5.2 46 194-240 293-338 (338)
466 PRK10871 nlpD lipoprotein NlpD 98.4 2.4E-07 5.1E-12 95.4 4.7 48 196-243 62-109 (319)
467 COG3858 Predicted glycosyl hyd 98.4 4.4E-07 9.5E-12 94.8 5.7 98 129-245 3-100 (423)
468 PRK09902 hypothetical protein; 98.3 1E-05 2.2E-10 78.9 14.3 127 380-512 32-180 (216)
469 COG0661 AarF Predicted unusual 98.3 2.6E-06 5.6E-11 94.5 10.4 133 366-515 132-318 (517)
470 smart00257 LysM Lysin motif. 98.3 1.1E-06 2.4E-11 62.5 4.5 44 196-239 1-44 (44)
471 COG3858 Predicted glycosyl hyd 98.2 1.7E-06 3.8E-11 90.4 4.7 94 62-177 2-96 (423)
472 PRK13914 invasion associated s 98.1 2.4E-06 5.2E-11 92.1 4.8 47 196-243 29-75 (481)
473 TIGR02899 spore_safA spore coa 98.1 3.9E-06 8.4E-11 60.5 4.2 43 66-111 1-44 (44)
474 PF12260 PIP49_C: Protein-kina 98.1 1.2E-05 2.7E-10 77.9 8.9 105 403-513 8-113 (188)
475 COG0478 RIO-like serine/threon 98.1 1.8E-05 4E-10 79.0 9.5 118 380-514 105-254 (304)
476 PRK10871 nlpD lipoprotein NlpD 98.0 1.3E-05 2.8E-10 82.8 7.6 47 63-112 62-108 (319)
477 cd05150 APH Aminoglycoside 3'- 98.0 5.3E-05 1.1E-09 76.9 12.1 131 380-511 13-193 (244)
478 TIGR02172 Fb_sc_TIGR02172 Fibr 98.0 6.8E-05 1.5E-09 75.1 12.2 132 367-511 9-182 (226)
479 PRK11198 LysM domain/BON super 98.0 6.8E-06 1.5E-10 76.2 4.4 46 195-240 96-146 (147)
480 cd00118 LysM Lysin domain, fou 98.0 1.2E-05 2.5E-10 57.8 4.7 45 63-110 2-46 (46)
481 TIGR02907 spore_VI_D stage VI 97.9 1.3E-05 2.8E-10 81.8 5.1 47 60-110 292-338 (338)
482 PF06176 WaaY: Lipopolysacchar 97.9 0.0001 2.2E-09 72.3 11.1 115 380-511 45-183 (229)
483 KOG1235 Predicted unusual prot 97.8 8.4E-05 1.8E-09 82.4 10.6 135 363-515 165-358 (538)
484 PRK11198 LysM domain/BON super 97.6 5.6E-05 1.2E-09 70.1 4.6 48 128-176 96-146 (147)
485 PRK10593 hypothetical protein; 97.6 0.00047 1E-08 72.1 12.0 68 367-441 22-100 (297)
486 PF01636 APH: Phosphotransfera 97.6 0.00069 1.5E-08 67.5 11.8 131 380-511 11-197 (239)
487 COG1718 RIO1 Serine/threonine 97.5 0.0011 2.4E-08 65.8 12.4 121 380-514 62-218 (268)
488 COG2112 Predicted Ser/Thr prot 97.5 0.00093 2E-08 62.9 10.7 121 365-512 28-156 (201)
489 PLN02876 acyl-CoA dehydrogenas 97.5 0.0006 1.3E-08 81.4 11.8 140 367-513 46-259 (822)
490 KOG1035 eIF-2alpha kinase GCN2 97.4 0.00067 1.4E-08 79.8 9.5 197 401-644 229-436 (1351)
491 smart00257 LysM Lysin motif. 97.3 0.0003 6.6E-09 49.5 4.4 43 64-109 2-44 (44)
492 COG1388 LytE FOG: LysM repeat 97.3 0.00025 5.5E-09 63.9 4.6 46 128-177 67-112 (124)
493 KOG0576 Mitogen-activated prot 97.3 4.7E-05 1E-09 83.8 -0.2 176 367-570 250-430 (829)
494 cd05155 APH_ChoK_like_1 Unchar 97.1 0.0024 5.2E-08 64.3 9.7 32 480-511 163-194 (235)
495 cd05157 ETNK_euk Ethanolamine 97.1 0.006 1.3E-07 61.3 12.3 128 380-511 12-201 (235)
496 TIGR02721 ycfN_thiK thiamine k 97.0 0.0036 7.9E-08 63.9 10.0 127 380-512 10-176 (256)
497 PF10707 YrbL-PhoP_reg: PhoP r 96.8 0.016 3.6E-07 56.5 12.3 92 401-505 58-165 (199)
498 PF03881 Fructosamin_kin: Fruc 96.5 0.016 3.6E-07 60.0 10.6 134 367-507 25-214 (288)
499 PRK09550 mtnK methylthioribose 96.5 0.02 4.3E-07 62.1 11.5 65 366-439 33-116 (401)
500 PF13095 FTA2: Kinetochore Sim 96.2 0.056 1.2E-06 52.6 11.6 104 380-509 52-206 (207)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-51 Score=431.86 Aligned_cols=278 Identities=40% Similarity=0.718 Sum_probs=238.8
Q ss_pred cccccchhHHHHHhCCCCccccee----eEEEEEEECC-CeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEE
Q 005923 356 SLTLYKFQDLKIATGSFSEENRIQ----GSVYRGSFKG-DDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFC 423 (669)
Q Consensus 356 ~~~~~~~~~l~~~~g~f~~~~~~~----G~Vy~g~~~g-~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~ 423 (669)
....|.+.+++.+|.+|+.++.++ |.||+|.+++ ..||||++.. +|..|++++.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 457799999999999999999886 8999999965 8899998742 588999999999999999999999
Q ss_pred EecC-ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEE
Q 005923 424 VHEG-NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAK 502 (669)
Q Consensus 424 ~~~~-~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~k 502 (669)
.+++ +.+||||||++|+|.++|+.... . .|+|.+|++||.++|.||+|||+...|+|||||||++|||||+++++|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~--~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKG--E-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCC--C-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9998 49999999999999999987631 1 799999999999999999999999989999999999999999999999
Q ss_pred EcccCCccccCC-CccccCCcccceeeec-ccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHH
Q 005923 503 ITNFGLARSAES-DEHEQGGYGLQLTRHV-VGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580 (669)
Q Consensus 503 l~DfGla~~~~~-~~~~~~~~~~~~~~~~-~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~ 580 (669)
|+|||+|+.... ... .... .||.+|+|||++..+..+.|+|||||||+|+||+||+.+.+.........
T Consensus 218 lsDFGLa~~~~~~~~~---------~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~ 288 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTS---------VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELS 288 (361)
T ss_pred ccCccCcccCCccccc---------eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCccccc
Confidence 999999976653 221 1111 79999999999999999999999999999999999999888543222233
Q ss_pred HHHHHHHHHhhhhHHhhhhcccCCccC-CCCcH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcC
Q 005923 581 LYASISRVLEESNVREKLRGFIDPSLR-NEYPL-DLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSS 649 (669)
Q Consensus 581 ~~~~~~~~~~~~~~~~~l~~~~d~~l~-~~~~~-~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 649 (669)
+..|+...+.+. .+..++|+.+. ..++. +....+.+++.+|++.+|.+||+|.||++.|+.+...
T Consensus 289 l~~w~~~~~~~~----~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 289 LVEWAKPLLEEG----KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHHHHHHHCc----chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 555555555443 78889999987 66664 6788899999999999999999999999999776544
No 2
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-48 Score=410.66 Aligned_cols=245 Identities=31% Similarity=0.544 Sum_probs=216.8
Q ss_pred HHHhCCCCcccceeeEEEEEEECCC-eeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCC
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADN 438 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g~-~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 438 (669)
++|+|.| |.||.|.+++. .||+|.++. +|.+|+++|++|+|+|||+++|+|..++.++||||||+.
T Consensus 213 ~LG~G~F-------G~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 213 ELGSGQF-------GEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HhcCCcc-------ceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence 6899999 99999999987 899999864 588999999999999999999999998899999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccc
Q 005923 439 GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518 (669)
Q Consensus 439 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~ 518 (669)
|+|.+||+.. ....+...+.+.++.|||+||+||++++ +|||||.++||||+++..+||+||||||...++.+
T Consensus 286 GsLl~yLr~~---~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y- 358 (468)
T KOG0197|consen 286 GSLLDYLRTR---EGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY- 358 (468)
T ss_pred CcHHHHhhhc---CCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCce-
Confidence 9999999873 3467899999999999999999999999 99999999999999999999999999996554432
Q ss_pred cCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhhhHHhh
Q 005923 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREK 597 (669)
Q Consensus 519 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (669)
.......-+..|.|||++..+.|+.|||||||||+||||+| |+.|+.+....+
T Consensus 359 ------~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e-------------------- 412 (468)
T KOG0197|consen 359 ------TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE-------------------- 412 (468)
T ss_pred ------eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH--------------------
Confidence 12223345779999999999999999999999999999999 888888765432
Q ss_pred hhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCC
Q 005923 598 LRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSS 650 (669)
Q Consensus 598 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 650 (669)
+-..++.+.|.+.|..|+.+++++|..||+.+|++|||++.+...|+.+....
T Consensus 413 v~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 413 VLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred HHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 22345567888999999999999999999999999999999999999987654
No 3
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-47 Score=422.24 Aligned_cols=249 Identities=30% Similarity=0.487 Sum_probs=215.2
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-------CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-------GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-------g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
++|+|.| |+||+|... ...||||.+|+ ||++|+++|..++|||||+|+|+|.+++.++
T Consensus 493 eLGegaF-------GkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 493 ELGEGAF-------GKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hhcCchh-------hhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 5999999 999999873 23589999874 6999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCCC-----C----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcE
Q 005923 431 LVYEFADNGALSDWLHSNRYQ-----T----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA 501 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~-----~----~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~ 501 (669)
||+|||.+|||.+||+.+... . ..+|+..+.++||.|||.||+||-++. +|||||.++|+||.++..+
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEE
Confidence 999999999999999764211 1 234999999999999999999999999 9999999999999999999
Q ss_pred EEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHH
Q 005923 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAEL 580 (669)
Q Consensus 502 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 580 (669)
||+||||+|.....++.. ...+..-+++|||||.+..++||.+||||||||||||+++ |+.|+.+-.+.+.
T Consensus 643 KIsDfGLsRdiYssDYYk------~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV-- 714 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYK------VRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV-- 714 (774)
T ss_pred Eecccccchhhhhhhhhc------ccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH--
Confidence 999999999988776543 2223455789999999999999999999999999999999 9999987655321
Q ss_pred HHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCC
Q 005923 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSS 650 (669)
Q Consensus 581 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 650 (669)
+..+-+..+ .+.|++|+.++++||..||+.+|.+||+++||-..|+.....+
T Consensus 715 -----------------Ie~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 715 -----------------IECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred -----------------HHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 122222333 6789999999999999999999999999999999999887654
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-46 Score=397.02 Aligned_cols=244 Identities=33% Similarity=0.574 Sum_probs=211.1
Q ss_pred HHhCCCCcccceeeEEEEEEECCCe-eEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecC-ceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEG-NTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g~~-vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~e~ 435 (669)
+|+|.| |+||+|.++|+. ||||++.. +|.+|+.+|.+++|||||+++|+|.+.. ..++||||
T Consensus 49 iG~G~~-------g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 49 LGSGSF-------GTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred cccCCc-------eeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 899999 999999999999 99999974 6899999999999999999999998887 79999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC-cEEEcccCCccccCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL-RAKITNFGLARSAES 514 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~-~~kl~DfGla~~~~~ 514 (669)
+++|+|.++|++. ....+++..+++|+.|||+||+|||+++. |||||||++|||++.++ ++||+|||+++....
T Consensus 122 ~~~GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred CCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 9999999999873 23579999999999999999999999863 99999999999999998 999999999997654
Q ss_pred CccccCCcccceeeecccccccccccccc--cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhh
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIE--NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEES 592 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (669)
.. .......||..|||||++. ...|+.|+||||||++||||+||+.||.+..... .
T Consensus 197 ~~--------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~------~-------- 254 (362)
T KOG0192|consen 197 SK--------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ------V-------- 254 (362)
T ss_pred cc--------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH------H--------
Confidence 21 1122267999999999999 5699999999999999999999999998765411 1
Q ss_pred hHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcC
Q 005923 593 NVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSS 649 (669)
Q Consensus 593 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 649 (669)
...++....+...|..++..+..|+.+||+.||..||++.|++..|+.+...
T Consensus 255 -----~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~ 306 (362)
T KOG0192|consen 255 -----ASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSH 306 (362)
T ss_pred -----HHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence 1111223445666777888999999999999999999999999999988764
No 5
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-46 Score=404.59 Aligned_cols=251 Identities=31% Similarity=0.505 Sum_probs=218.9
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC-----CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK-----GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-----g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
.+++++ ||.|.| |.|++|+++ ...||||.+|. +|..|+.||.++.||||++|.|+.+..
T Consensus 631 i~Ie~V-IGaGEF-------GEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks 702 (996)
T KOG0196|consen 631 VKIEKV-IGAGEF-------GEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS 702 (996)
T ss_pred eEEEEE-Eecccc-------cceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC
Confidence 445554 899999 999999984 34799999963 799999999999999999999999999
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
...++|.|||+||+|..||+.+. +.+++-|+.-++++||.||+||.+.+ +|||||.++||||+.+..+||+||
T Consensus 703 ~PvMIiTEyMENGsLDsFLR~~D----GqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDF 775 (996)
T KOG0196|consen 703 KPVMIITEYMENGSLDSFLRQND----GQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDF 775 (996)
T ss_pred ceeEEEhhhhhCCcHHHHHhhcC----CceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccc
Confidence 99999999999999999998763 56999999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 585 (669)
||+|.+.++... ...+..-.-+++|.|||.+..+++|.++||||||+||||.++ |..|+.+..+.+
T Consensus 776 GLSRvledd~~~-----~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd-------- 842 (996)
T KOG0196|consen 776 GLSRVLEDDPEA-----AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-------- 842 (996)
T ss_pred cceeecccCCCc-----cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH--------
Confidence 999988655411 122333344679999999999999999999999999999998 999998765422
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCC
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSS 650 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 650 (669)
+...++..++.+.|.+|+..|.+||.+||++|-.+||.+.+|+..|.++.-..
T Consensus 843 ------------VIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 843 ------------VIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred ------------HHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 22234456788999999999999999999999999999999999999998554
No 6
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-42 Score=356.90 Aligned_cols=272 Identities=29% Similarity=0.459 Sum_probs=209.5
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEECCCeeEEEEec----ccHHHHHHHHHh--cCCCCceeEeeEEEecC----
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK----GDVSSEINILKK--INHSNIIRLSGFCVHEG---- 427 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~----~~~~~E~~~l~~--l~H~niv~l~g~~~~~~---- 427 (669)
....+.++ +|.|+| |.||+|.++++.||||++. ..+..|-+|.+. +.|+||++++++-....
T Consensus 210 ~pl~l~el-i~~Grf-------g~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ 281 (534)
T KOG3653|consen 210 DPLQLLEL-IGRGRF-------GCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRM 281 (534)
T ss_pred CchhhHHH-hhcCcc-------ceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccc
Confidence 34455554 899999 9999999999999999995 457777777765 58999999999976555
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC------CCCCeEeeCCCCCCeeecCCCcE
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKY------TNPPYVHKNLKTSNILLDTNLRA 501 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~------~~~~ivHrDik~~NILl~~~~~~ 501 (669)
+++||+||.++|||.+||..+ .++|....+|+..+++||+|||+. .+|+|+|||||++||||.+|+++
T Consensus 282 eywLVt~fh~kGsL~dyL~~n------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTc 355 (534)
T KOG3653|consen 282 EYWLVTEFHPKGSLCDYLKAN------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTC 355 (534)
T ss_pred ceeEEeeeccCCcHHHHHHhc------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcE
Confidence 789999999999999999875 599999999999999999999963 46899999999999999999999
Q ss_pred EEcccCCccccCCCccccCCcccceeeecccccccccccccccCC-CC-----chhhHHHHHHHHHHHHcCCCCCCCCch
Q 005923 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV-IT-----PKLDVFAFGVVVLELLSGREAVTGDQN 575 (669)
Q Consensus 502 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~s-----~~sDV~S~Gvvl~elltg~~p~~~~~~ 575 (669)
.|+|||||..+...... ..+...+||.+|||||++++.. +. .+.||||+|.|||||++....+..+..
T Consensus 356 cIaDFGLAl~~~p~~~~------~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~v 429 (534)
T KOG3653|consen 356 CIADFGLALRLEPGKPQ------GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPV 429 (534)
T ss_pred EeeccceeEEecCCCCC------cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCC
Confidence 99999999988754321 1233479999999999998743 22 368999999999999998877652222
Q ss_pred hHHHHHHH------HHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcC
Q 005923 576 CEAELLYA------SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSS 649 (669)
Q Consensus 576 ~~~~~~~~------~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 649 (669)
.+.+.+++ --..-+++...+++.+..+...++.. .-...+++.+..||+.|++.|.|+.=+.+++.++...
T Consensus 430 p~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h---~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 430 PEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKH---AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred CcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcC---ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 22222222 11112222222333333333333222 2345689999999999999999999999999999877
Q ss_pred CCC
Q 005923 650 SSD 652 (669)
Q Consensus 650 ~~~ 652 (669)
..+
T Consensus 507 ~~~ 509 (534)
T KOG3653|consen 507 WED 509 (534)
T ss_pred CCc
Confidence 655
No 7
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-43 Score=353.71 Aligned_cols=237 Identities=26% Similarity=0.426 Sum_probs=200.6
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEec--------ccHHHHHHHHHhcCCCCceeEeeEEEecCc-eeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMK--------GDVSSEINILKKINHSNIIRLSGFCVHEGN-TYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~--------~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-~~lV~e 434 (669)
.+|.|+- |+||++.++ +..+|+|++. .++.+|++++++.+||+||.++|.|..++. ..++||
T Consensus 86 ~lG~G~g-------G~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 86 VLGSGNG-------GTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred hcccCCC-------cEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 3899998 999999985 7788999983 246789999999999999999999999995 999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~-~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||++|||.+++... +.+++..+-+|+.+|++||.|||+ ++ ||||||||+|||++..|.+||||||.++.+.
T Consensus 159 YMDgGSLd~~~k~~-----g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lv 230 (364)
T KOG0581|consen 159 YMDGGSLDDILKRV-----GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILV 230 (364)
T ss_pred hcCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhh
Confidence 99999999999754 569999999999999999999996 77 9999999999999999999999999999875
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
.. .....+||..|||||.+.+..|+.++||||||++++|+.+|+.|+...... ....+
T Consensus 231 nS----------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~-~~~~~----------- 288 (364)
T KOG0581|consen 231 NS----------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP-YLDIF----------- 288 (364)
T ss_pred hh----------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC-CCCHH-----------
Confidence 43 235579999999999999999999999999999999999999999864110 00111
Q ss_pred HHhhhhcccCCccCCCCcHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 594 VREKLRGFIDPSLRNEYPLD-LAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~-~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+.+..+++.. ....|.+ +..++++++..||++||.+||++.|++++
T Consensus 289 --~Ll~~Iv~~p-pP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 289 --ELLCAIVDEP-PPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred --HHHHHHhcCC-CCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 2222333311 1233444 78889999999999999999999999876
No 8
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-42 Score=357.60 Aligned_cols=246 Identities=28% Similarity=0.453 Sum_probs=205.9
Q ss_pred HHHhCCCCcccceeeEEEEEEECC-CeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKG-DDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g-~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
++|+|.| |.|.....++ ..||||.++. +|.+|+++|.+++|||||+|+|+|..++.+++|+|||
T Consensus 545 kiGeGqF-------GEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 545 KIGEGQF-------GEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hhcCccc-------ceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 6999999 9999999876 8999999974 5889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
++|+|.+||..+.. ..+.-...++|+.||+.||+||.+.+ +|||||.++|||+|.++++||+|||++|.+..++
T Consensus 618 EnGDLnqFl~ahea---pt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 618 ENGDLNQFLSAHEL---PTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred hcCcHHHHHHhccC---cccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCC
Confidence 99999999987731 22455677889999999999999999 9999999999999999999999999999887765
Q ss_pred cccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS--GREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
+. ..-...+-+++|||||.+..+++|.++|||+||++|||+++ ...||....++ ..
T Consensus 692 yy------~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e----------------~v 749 (807)
T KOG1094|consen 692 YY------RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE----------------QV 749 (807)
T ss_pred ce------eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH----------------HH
Confidence 42 23344566889999999999999999999999999999876 55666543321 11
Q ss_pred HhhhhcccCCc---cCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 595 REKLRGFIDPS---LRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 595 ~~~l~~~~d~~---l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
.+....+.+.. .....|.-|+..++++|.+||..|..+||+++++...|++.
T Consensus 750 ven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 750 VENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 12222233221 12345678889999999999999999999999999999865
No 9
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-42 Score=391.14 Aligned_cols=249 Identities=31% Similarity=0.547 Sum_probs=211.7
Q ss_pred HHhCCCCcccceeeEEEEEEEC---CC----eeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK---GD----DAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~---g~----~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
+|+|.| |.||+|++. |. .||||.++. +|.+|..+|++++|||||+++|+|.+.+..++
T Consensus 700 lG~G~F-------G~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 700 LGKGAF-------GEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred eccccc-------cceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 899999 999999984 33 389998863 58899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 432 VYEFADNGALSDWLHSNRYQ--TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++|||++|+|..||++.|.. ....|+-..++.++.|||+|++||++++ +|||||.++|+||++...+||+|||||
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccchh
Confidence 99999999999999986422 1456999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
|.+...++... .....-+.+|||||.+..+.||.|+|||||||+|||++| |..||.+..+.+. +..+
T Consensus 850 rDiy~~~yyr~------~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v------~~~~ 917 (1025)
T KOG1095|consen 850 RDIYDKDYYRK------HGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV------LLDV 917 (1025)
T ss_pred Hhhhhchheec------cCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH------HHHH
Confidence 97665554322 111244578999999999999999999999999999999 8888887654321 1111
Q ss_pred HhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCC
Q 005923 589 LEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSS 651 (669)
Q Consensus 589 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 651 (669)
+..+ +.+.|..|+..+++||..||+.+|++||++..|++.+..+.+...
T Consensus 918 -------------~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 918 -------------LEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred -------------HhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 1122 567888999999999999999999999999999999999886643
No 10
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-41 Score=361.23 Aligned_cols=240 Identities=28% Similarity=0.458 Sum_probs=208.0
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
+.|+...+ +|+|+| ..||.++. .|+.||+|++.. .+.+|++|.++|+|||||+++++|++
T Consensus 18 ~~Y~~g~~-LGkGgF-------A~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED 89 (592)
T KOG0575|consen 18 KRYKRGRF-LGKGGF-------ARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED 89 (592)
T ss_pred ceeeeeee-eccCcc-------eEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec
Confidence 45666665 999999 99999998 589999999843 46789999999999999999999999
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcc
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 505 (669)
.++.|||.|++++|+|.++++++ +.|++..++.+..||+.||.|||+++ |+|||||..|+|++++.++||+|
T Consensus 90 s~nVYivLELC~~~sL~el~Krr-----k~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgD 161 (592)
T KOG0575|consen 90 SNNVYIVLELCHRGSLMELLKRR-----KPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGD 161 (592)
T ss_pred CCceEEEEEecCCccHHHHHHhc-----CCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecc
Confidence 99999999999999999999854 57999999999999999999999999 99999999999999999999999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 585 (669)
||||..+..++ ......+||+.|+|||++.....+..+||||+|||||-||.|+.||....-.+..
T Consensus 162 FGLAt~le~~~--------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety------ 227 (592)
T KOG0575|consen 162 FGLATQLEYDG--------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETY------ 227 (592)
T ss_pred cceeeeecCcc--------cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHH------
Confidence 99999887553 2235689999999999999999999999999999999999999999865432211
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
..+... ....|..+..+..+||.++|+.||.+|||+++|+..
T Consensus 228 -------------~~Ik~~--~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 228 -------------NKIKLN--EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred -------------HHHHhc--CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 111111 123456777889999999999999999999999975
No 11
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-42 Score=361.52 Aligned_cols=245 Identities=29% Similarity=0.496 Sum_probs=215.4
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc------HHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecC
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD------VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFAD 437 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~------~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~ 437 (669)
++|.|.| |.||.|.|+ .-.||||.+|.| |.+|+.+|+.++|||+|+|+|+|+.+...|+|.|||.
T Consensus 274 KLGGGQY-------GeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 274 KLGGGQY-------GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred ccCCCcc-------cceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEeccc
Confidence 5899999 999999996 557999999864 8899999999999999999999999999999999999
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCcc
Q 005923 438 NGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517 (669)
Q Consensus 438 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~ 517 (669)
+|+|.|||+.. +...++--.++.++.||..||+||..++ +|||||.++|+|+.++..+||+||||+|.+..+.+
T Consensus 347 yGNLLdYLRec---nr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTY 420 (1157)
T KOG4278|consen 347 YGNLLDYLREC---NRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTY 420 (1157)
T ss_pred CccHHHHHHHh---chhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCCce
Confidence 99999999875 3345777888999999999999999999 99999999999999999999999999999877654
Q ss_pred ccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhhhHHh
Q 005923 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVRE 596 (669)
Q Consensus 518 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (669)
..+ ....-.+.|.|||.+....++.|+|||+|||+|||+.| |..|+.+.+-.
T Consensus 421 TAH-------AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS-------------------- 473 (1157)
T KOG4278|consen 421 TAH-------AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-------------------- 473 (1157)
T ss_pred ecc-------cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH--------------------
Confidence 221 11234678999999999999999999999999999998 88888875422
Q ss_pred hhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCC
Q 005923 597 KLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSS 650 (669)
Q Consensus 597 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 650 (669)
.+-++++..++.+.|+.|+..+++||+.||+.+|.+||++.|+.+.|+.|.+++
T Consensus 474 qVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 474 QVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred HHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 223344556778889999999999999999999999999999999999998765
No 12
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-41 Score=342.24 Aligned_cols=193 Identities=32% Similarity=0.571 Sum_probs=173.0
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc---------HHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD---------VSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~---------~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
..|.+.. ++|.|.| |.||+|+. ++..||||.+... +..|+.+|+.++|||||+|+++++.+
T Consensus 10 ~~y~~~~-~iG~Gsf-------avVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~ 81 (429)
T KOG0595|consen 10 GDYELSR-EIGSGSF-------AVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD 81 (429)
T ss_pred ccceehh-hccCcce-------EEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC
Confidence 4455544 4999999 99999998 4788999988532 46799999999999999999999999
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC------Cc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN------LR 500 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~------~~ 500 (669)
+..||||||+.+|+|.+|+++. +.+++...+.++.|||.||++||+++ ||||||||.||||+.. -.
T Consensus 82 ~~i~lVMEyC~gGDLs~yi~~~-----~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~ 153 (429)
T KOG0595|consen 82 DFIYLVMEYCNGGDLSDYIRRR-----GRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPV 153 (429)
T ss_pred CeEEEEEEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCce
Confidence 9999999999999999999876 36999999999999999999999999 9999999999999764 46
Q ss_pred EEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCch
Q 005923 501 AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQN 575 (669)
Q Consensus 501 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~ 575 (669)
+||+|||+||.+.... ......|++.|||||++..++|+.|+|+||.|+++|++++|+.||.....
T Consensus 154 LKIADFGfAR~L~~~~---------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 154 LKIADFGFARFLQPGS---------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred EEecccchhhhCCchh---------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 8999999999987543 34557899999999999999999999999999999999999999986554
No 13
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-42 Score=356.74 Aligned_cols=235 Identities=28% Similarity=0.482 Sum_probs=209.0
Q ss_pred HHhCCCCcccceeeEEEEEEECCCeeEEEEecccHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCCCCHHHHHh
Q 005923 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLH 446 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 446 (669)
+|.|.- |.||+|++.++.||||+++.--..+|+-|++|+|+||+.+.|+|...-.+|+||||++.|-|.+.|+
T Consensus 132 lGSGaQ-------GAVF~Grl~netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLk 204 (904)
T KOG4721|consen 132 LGSGAQ-------GAVFLGRLHNETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLK 204 (904)
T ss_pred hccCcc-------cceeeeeccCceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHh
Confidence 788888 9999999999999999999877789999999999999999999999999999999999999999997
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccce
Q 005923 447 SNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526 (669)
Q Consensus 447 ~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 526 (669)
.. ..++...++.|..+||.||+|||.+. |||||||+-||||..+..+||+|||-++...... .
T Consensus 205 a~-----~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S---------T 267 (904)
T KOG4721|consen 205 AG-----RPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDKS---------T 267 (904)
T ss_pred cc-----CccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhhh---------h
Confidence 64 56889999999999999999999999 9999999999999999999999999998765432 2
Q ss_pred eeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCcc
Q 005923 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSL 606 (669)
Q Consensus 527 ~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 606 (669)
.-.+.||..|||||++.+...+.|+|||||||||||||||..||.+-+.. ..+-..=...+
T Consensus 268 kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss-------------------AIIwGVGsNsL 328 (904)
T KOG4721|consen 268 KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS-------------------AIIWGVGSNSL 328 (904)
T ss_pred hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh-------------------eeEEeccCCcc
Confidence 23468999999999999999999999999999999999999999753321 11112223456
Q ss_pred CCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 607 RNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 607 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
..+.|..|+.-+.=|++.||+..|.+||++++|+.+|.
T Consensus 329 ~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 329 HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 67888899999999999999999999999999999986
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9e-42 Score=330.41 Aligned_cols=252 Identities=27% Similarity=0.403 Sum_probs=204.6
Q ss_pred cccccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEec---------ccHHHHHHHHHhcCCCCceeEee-EE
Q 005923 356 SLTLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMK---------GDVSSEINILKKINHSNIIRLSG-FC 423 (669)
Q Consensus 356 ~~~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~---------~~~~~E~~~l~~l~H~niv~l~g-~~ 423 (669)
++..|.+.+ ++|.|.| |+|||+.. +|..+|.|.++ .+..+|+.+|++++|||||++++ .+
T Consensus 17 ~l~~y~Il~-~IG~GsF-------g~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f 88 (375)
T KOG0591|consen 17 TLADYQILK-KIGRGSF-------GEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF 88 (375)
T ss_pred cHHHHHHHH-HHcCCcc-------hheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh
Confidence 445677766 5999999 99999976 68899999874 35678999999999999999999 44
Q ss_pred EecCc-eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCeEeeCCCCCCeeecCCCcE
Q 005923 424 VHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT-NPPYVHKNLKTSNILLDTNLRA 501 (669)
Q Consensus 424 ~~~~~-~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~-~~~ivHrDik~~NILl~~~~~~ 501 (669)
.++.. +++||||+..|+|...++.-+ ...+.++++.+++++.|++.||.++|++- +..|+||||||.||+++.+|.+
T Consensus 89 ~~~~evlnivmE~c~~GDLsqmIk~~K-~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvv 167 (375)
T KOG0591|consen 89 IEDNEVLNIVMELCDAGDLSQMIKHFK-KQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVV 167 (375)
T ss_pred hccchhhHHHHHhhcccCHHHHHHHHH-hccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCce
Confidence 44444 899999999999999998764 34567999999999999999999999831 1239999999999999999999
Q ss_pred EEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHH
Q 005923 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELL 581 (669)
Q Consensus 502 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~ 581 (669)
|++||||+|.+.... ......+||+.||+||.+.+..|+.|+||||+||++|||..-+.||.+++- ..+
T Consensus 168 KLGDfGL~r~l~s~~--------tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~---~~L 236 (375)
T KOG0591|consen 168 KLGDFGLGRFLSSKT--------TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL---LSL 236 (375)
T ss_pred eeccchhHhHhcchh--------HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH---HHH
Confidence 999999999987653 345668999999999999999999999999999999999999999998631 111
Q ss_pred HHHHHHHHhhhhHHhhhhcccCCccCCCCc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 582 YASISRVLEESNVREKLRGFIDPSLRNEYP-LDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 582 ~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~-~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
.. ++.. +--.+.| .-....+.+|+..|+..||..||+...++..+.
T Consensus 237 ~~-------------KI~q----gd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 237 CK-------------KIEQ----GDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred HH-------------HHHc----CCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 11 1111 1012234 455677899999999999999999655554443
No 15
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-41 Score=343.75 Aligned_cols=239 Identities=28% Similarity=0.437 Sum_probs=196.3
Q ss_pred HHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 364 DLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 364 ~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
.-.+|.|.| |.|-+|.- .|+.||||++.. ++.+|+++|++++|||||++.+++...+
T Consensus 177 ~~~LGsGaf-------g~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 177 SKTLGSGAF-------GLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred eeeecCCce-------eEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 346999999 99999987 489999999852 3568999999999999999999999999
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC---CcEEEc
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN---LRAKIT 504 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~---~~~kl~ 504 (669)
..||||||++||+|.+++-.+ +.+.+..-.-+++|++.|+.|||++| |+||||||+|||+..+ ..+||+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~n-----k~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKIt 321 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVAN-----KYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKIT 321 (475)
T ss_pred ceEEEEEEecCccHHHHHHhc-----cccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEec
Confidence 999999999999999999765 34777777889999999999999999 9999999999999765 889999
Q ss_pred ccCCccccCCCccccCCcccceeeecccccccccccccccCCC---CchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVI---TPKLDVFAFGVVVLELLSGREAVTGDQNCEAELL 581 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~---s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~ 581 (669)
|||+|+..+.. ...+..+||+.|.|||++.+..+ ..+.|+||+|||||-+++|..||.+..... .+
T Consensus 322 DFGlAK~~g~~---------sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl 390 (475)
T KOG0615|consen 322 DFGLAKVSGEG---------SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SL 390 (475)
T ss_pred ccchhhccccc---------eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cH
Confidence 99999987643 35677899999999999976543 348899999999999999999998643211 01
Q ss_pred HHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 582 YASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 582 ~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+.+ ..+ + ..+....-.....+..+||.+||..||++|||++|++.+
T Consensus 391 ~eQI---~~G-----~------y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 391 KEQI---LKG-----R------YAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred HHHH---hcC-----c------ccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 0110 000 0 011223345667889999999999999999999999864
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-41 Score=346.16 Aligned_cols=256 Identities=30% Similarity=0.441 Sum_probs=209.4
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecccH--------HHHHHHHHhcC-CCCceeEeeEEEec
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV--------SSEINILKKIN-HSNIIRLSGFCVHE 426 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~~--------~~E~~~l~~l~-H~niv~l~g~~~~~ 426 (669)
.+|..-+ ++|.|.| |+||+|+- .|+.||||+||..| .+|++.|++|+ ||||++|..++.+.
T Consensus 10 ~RY~~i~-klGDGTf-------GsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~ 81 (538)
T KOG0661|consen 10 DRYTVIR-KLGDGTF-------GSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDN 81 (538)
T ss_pred HHHHHHH-HhcCCcc-------eeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhcc
Confidence 3455544 6999999 99999987 48899999998754 47999999999 99999999999988
Q ss_pred C-ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcc
Q 005923 427 G-NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505 (669)
Q Consensus 427 ~-~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 505 (669)
+ .+++|||||+. +|.+.++++ .+.+++..+..|+.||+.||+|+|.+| +.|||+||+|||+..+..+||+|
T Consensus 82 ~~~L~fVfE~Md~-NLYqLmK~R----~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaD 153 (538)
T KOG0661|consen 82 DRILYFVFEFMDC-NLYQLMKDR----NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIAD 153 (538)
T ss_pred CceEeeeHHhhhh-hHHHHHhhc----CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecc
Confidence 8 89999999986 999999865 367999999999999999999999999 99999999999999999999999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE-NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 584 (669)
||+||...+... .+..+.|.+|+|||++. .+.|+.+.|+||+|||++|+.+-+..|.|..+.+ ....
T Consensus 154 FGLARev~SkpP---------YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D---qi~K 221 (538)
T KOG0661|consen 154 FGLAREVRSKPP---------YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID---QIYK 221 (538)
T ss_pred cccccccccCCC---------cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH---HHHH
Confidence 999998865432 34468899999999985 5789999999999999999999999998865422 2345
Q ss_pred HHHHHhhhhHHhh-----hhcccCCc--------cCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 585 ISRVLEESNVREK-----LRGFIDPS--------LRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 585 ~~~~~~~~~~~~~-----l~~~~d~~--------l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+..++..+..... +...+.-. +..-.| ....+..+|+.+|+..||.+|||+.|.+++
T Consensus 222 Ic~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 222 ICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 5666654443221 22222111 111122 256778999999999999999999999976
No 17
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=338.51 Aligned_cols=238 Identities=26% Similarity=0.441 Sum_probs=197.4
Q ss_pred HHHhCCCCcccceeeEEEEEEECCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEe----cCceeE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVH----EGNTYL 431 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~l 431 (669)
.+++|++ |.||+|.++|+.||||.++. .+.+|+++|++++||||++++|++.+ ....++
T Consensus 27 ~i~~g~~-------~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~l 99 (283)
T PHA02988 27 LIKENDQ-------NSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSL 99 (283)
T ss_pred EEeeCCc-------eEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEE
Confidence 3678888 99999999999999999853 24589999999999999999999977 346799
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeeCCCCCCeeecCCCcEEEcccCCcc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKY-TNPPYVHKNLKTSNILLDTNLRAKITNFGLAR 510 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~-~~~~ivHrDik~~NILl~~~~~~kl~DfGla~ 510 (669)
||||+++|+|.++++.. +.++|...++++.|++.||.|||+. + ++||||||+|||+++++.+||+|||+++
T Consensus 100 v~Ey~~~g~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~kl~dfg~~~ 171 (283)
T PHA02988 100 ILEYCTRGYLREVLDKE-----KDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKLKIICHGLEK 171 (283)
T ss_pred EEEeCCCCcHHHHHhhC-----CCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcEEEcccchHh
Confidence 99999999999999754 3589999999999999999999984 6 7899999999999999999999999998
Q ss_pred ccCCCccccCCcccceeeeccccccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN--GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
...... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+....+. ...
T Consensus 172 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~---~~~---- 233 (283)
T PHA02988 172 ILSSPP-----------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI---YDL---- 233 (283)
T ss_pred hhcccc-----------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH---HHH----
Confidence 654321 12357889999999976 7899999999999999999999999986543211 000
Q ss_pred HhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhc
Q 005923 589 LEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWS 648 (669)
Q Consensus 589 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 648 (669)
++....+...+..++..+.+++.+||+.||.+|||++|+++.|+.+++
T Consensus 234 ------------i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 234 ------------IINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred ------------HHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 011111223344566789999999999999999999999999998864
No 18
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=355.12 Aligned_cols=245 Identities=29% Similarity=0.547 Sum_probs=207.8
Q ss_pred HHHhCCCCcccceeeEEEEEEEC---C--Ce-eEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK---G--DD-AAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~---g--~~-vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
++|+|+| |.||+|++. + .. ||||..+. ++.+|+++|++++|||||+++|++..+..+
T Consensus 164 kLGeGaF-------GeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 164 KLGEGAF-------GEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred eeecccc-------cEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 6999999 999999983 2 23 89999874 367899999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++|||++.||+|.++|++.+ +.++..+++.++.++|.||+|||+++ ++||||.++|+|++.++.+||+|||++
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~----~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs 309 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNK----KSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLS 309 (474)
T ss_pred EEEEEecCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccc
Confidence 99999999999999998763 36999999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCccccCCcccceee-ecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTR-HVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~-~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 587 (669)
+..... .... ...-+.+|+|||.+..+.|+.++|||||||++||+++ |..|+.+....+.
T Consensus 310 ~~~~~~---------~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v--------- 371 (474)
T KOG0194|consen 310 RAGSQY---------VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEV--------- 371 (474)
T ss_pred cCCcce---------eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHH---------
Confidence 865411 1111 2245789999999999999999999999999999999 8899988664311
Q ss_pred HHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCCC
Q 005923 588 VLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSSD 652 (669)
Q Consensus 588 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 652 (669)
...++...++...|...+..+..++.+||..||++||+|.++.+.|+.+......
T Consensus 372 ----------~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 372 ----------KAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred ----------HHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 1111123445556667788899999999999999999999999999999876543
No 19
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-40 Score=343.10 Aligned_cols=251 Identities=27% Similarity=0.431 Sum_probs=211.1
Q ss_pred cccccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHhc-CCCCceeEeeE
Q 005923 356 SLTLYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKKI-NHSNIIRLSGF 422 (669)
Q Consensus 356 ~~~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~l-~H~niv~l~g~ 422 (669)
....|+|.++ +|.|.| .+|++++.. +..+|||++..+ +..|-++|.+| +||.|++|+..
T Consensus 71 ~~~DF~Fg~~-lGeGSY-------StV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T 142 (604)
T KOG0592|consen 71 TPNDFKFGKI-LGEGSY-------STVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT 142 (604)
T ss_pred Chhhcchhhe-eccccc-------eeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE
Confidence 4456888886 999999 899999874 789999998543 45789999999 89999999999
Q ss_pred EEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEE
Q 005923 423 CVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAK 502 (669)
Q Consensus 423 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~k 502 (669)
|.++..+|+|+||+++|+|.+++++. +.|++.....++.+|+.||+|||++| ||||||||+|||||+|+++|
T Consensus 143 FQD~~sLYFvLe~A~nGdll~~i~K~-----Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 143 FQDEESLYFVLEYAPNGDLLDLIKKY-----GSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred eecccceEEEEEecCCCcHHHHHHHh-----CcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEE
Confidence 99999999999999999999999865 57999999999999999999999999 99999999999999999999
Q ss_pred EcccCCccccCCCccccCC--ccc-ce--eeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhH
Q 005923 503 ITNFGLARSAESDEHEQGG--YGL-QL--TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577 (669)
Q Consensus 503 l~DfGla~~~~~~~~~~~~--~~~-~~--~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~ 577 (669)
|+|||-|+.+......... ... .. ....+||..|.+||+|..+..++.+|+|+|||+||.|+.|+.||.+.+.
T Consensus 215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-- 292 (604)
T KOG0592|consen 215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-- 292 (604)
T ss_pred EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH--
Confidence 9999999987654322110 000 11 2458999999999999999999999999999999999999999987653
Q ss_pred HHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 578 AELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
.+.++.+.. +.-++|.+.++.+.+|+++.|..||.+|+|..+|.++.
T Consensus 293 -yliFqkI~~------------------l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 293 -YLIFQKIQA------------------LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred -HHHHHHHHH------------------hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 333333221 12355666678899999999999999999999988763
No 20
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=339.70 Aligned_cols=253 Identities=28% Similarity=0.423 Sum_probs=198.4
Q ss_pred HHHhCCCCcccceeeEEEEEEECCCeeEEEEecc----cHHHHHHHHHh--cCCCCceeEeeEEEecC----ceeEEEEe
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG----DVSSEINILKK--INHSNIIRLSGFCVHEG----NTYLVYEF 435 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~----~~~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~lV~e~ 435 (669)
.+|.|+| |.||+|.|.|+.||||++.. .+.+|.++.+. |+|+||+.+++.-..+. .+|||.+|
T Consensus 218 ~IGkGRy-------GEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdY 290 (513)
T KOG2052|consen 218 IIGKGRF-------GEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDY 290 (513)
T ss_pred EecCccc-------cceeeccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeec
Confidence 3899999 99999999999999999953 46677777766 59999999999865443 57999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-----hCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcc
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH-----KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR 510 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH-----~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~ 510 (669)
.++|||.|||.++ .++-...++++..+|.||+||| .+++|.|.|||||+.||||.+++.+.|+|+|||.
T Consensus 291 He~GSL~DyL~r~------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 291 HEHGSLYDYLNRN------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred ccCCcHHHHHhhc------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 9999999999764 5999999999999999999999 4689999999999999999999999999999998
Q ss_pred ccCCCccccCCcccceeeecccccccccccccccCCC------CchhhHHHHHHHHHHHHcCC----------CCCCCCc
Q 005923 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVI------TPKLDVFAFGVVVLELLSGR----------EAVTGDQ 574 (669)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~------s~~sDV~S~Gvvl~elltg~----------~p~~~~~ 574 (669)
....+...- ....+..+||.+|||||++....- =..+||||||.|+||+.... .||.+--
T Consensus 365 ~h~~~t~~i----di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V 440 (513)
T KOG2052|consen 365 RHDSDTDTI----DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV 440 (513)
T ss_pred EecccCCcc----cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence 876553211 233567899999999999975332 12589999999999997633 3333211
Q ss_pred hhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCC-----cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcC
Q 005923 575 NCEAELLYASISRVLEESNVREKLRGFIDPSLRNEY-----PLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSS 649 (669)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~-----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 649 (669)
+ .++..++..+-+...+++... ..++...|.+||+.||..||..|-|+-.|-+.|.++.+.
T Consensus 441 p--------------~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 441 P--------------SDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS 506 (513)
T ss_pred C--------------CCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence 1 011111122222233333332 346677899999999999999999999999999999864
No 21
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-39 Score=335.49 Aligned_cols=252 Identities=28% Similarity=0.399 Sum_probs=201.9
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc---------HHHHHHHHHhcCCCCceeEeeEEEec--CceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD---------VSSEINILKKINHSNIIRLSGFCVHE--GNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~---------~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV 432 (669)
+||+|.| |.||+|+. .|+.||+|+++-+ ..+||.||++|+||||++|.+..++. +.+|||
T Consensus 124 kIGeGTy-------g~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 124 KIGEGTY-------GQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HhcCcch-------hheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 5899999 99999997 5888999998743 35899999999999999999999877 689999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
+|||++ +|.-++... .-.|+..++..++.|++.||+|+|+.+ |+|||||.+|||||.+|.+||+|||||+..
T Consensus 197 FeYMdh-DL~GLl~~p----~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSP----GVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred Eecccc-hhhhhhcCC----CcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeec
Confidence 999998 899988753 245999999999999999999999999 999999999999999999999999999987
Q ss_pred CCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... ...+..+-|.+|+|||.|.+ ..|+.+.|+||.||||.||+.|+..+.|..+.+ ..+.|.++...
T Consensus 269 ~~~~~-------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve---Ql~kIfklcGS 338 (560)
T KOG0600|consen 269 TPSGS-------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE---QLHKIFKLCGS 338 (560)
T ss_pred cCCCC-------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH---HHHHHHHHhCC
Confidence 65442 22344677999999999987 679999999999999999999999999876533 23444444433
Q ss_pred hhHH----hhhhcccCCccCCCCc-------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 592 SNVR----EKLRGFIDPSLRNEYP-------LDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 592 ~~~~----~~l~~~~d~~l~~~~~-------~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+... .++-.+.-......+. ..++....+|+..+|..||.+|.|+.++++.
T Consensus 339 P~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 339 PTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred CChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 2221 1121111111111121 2345567899999999999999999998854
No 22
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=340.34 Aligned_cols=241 Identities=32% Similarity=0.548 Sum_probs=211.5
Q ss_pred HHHhCCCCcccceeeEEEEEEEC----CC--eeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK----GD--DAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~----g~--~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
.+|.|-| |.||+|.+. |+ .||||..|. .|..|..+|++++||||++|+|+|. +...|+
T Consensus 396 ~iG~GqF-------GdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~-e~P~Wi 467 (974)
T KOG4257|consen 396 LIGEGQF-------GDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV-EQPMWI 467 (974)
T ss_pred hhcCCcc-------cceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-ccceeE
Confidence 4899999 999999983 33 478999875 3889999999999999999999995 668899
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
|||.++.|.|..||+.++ ..|+...+..++.||+.||.|||+.. +|||||..+|||+.+.-.+|++|||++|.
T Consensus 468 vmEL~~~GELr~yLq~nk----~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNK----DSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred EEecccchhHHHHHHhcc----ccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhh
Confidence 999999999999998764 56899999999999999999999999 99999999999999999999999999999
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
+..+.+... ....-++.|||||.+..+++|.++|||.|||.|||+++ |..||.+-.+.
T Consensus 541 ~ed~~yYka-------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs-------------- 599 (974)
T KOG4257|consen 541 LEDDAYYKA-------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS-------------- 599 (974)
T ss_pred ccccchhhc-------cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc--------------
Confidence 887664322 12345678999999999999999999999999999988 99999875432
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhc
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWS 648 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 648 (669)
.+...++.+-+.+.|..|+..++.|+.+||..||.+||++.|+...|+.+++
T Consensus 600 ------DVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 600 ------DVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ------ceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 1233455566789999999999999999999999999999999999999886
No 23
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.3e-39 Score=318.42 Aligned_cols=250 Identities=27% Similarity=0.431 Sum_probs=196.8
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
++|+|+| |.||+.+.+ |+.||||++.. -..+|+++|++++|+|+|.|+.+|..+..++||+|
T Consensus 9 kvGEGSY-------GvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 9 KVGEGSY-------GVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred ccccCcc-------eEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 4899999 999999884 88999999853 25689999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|++. ++.+-|... ...++...+.++++|++.|+.|+|+++ ++||||||+|||++.++.+||||||+||.+..
T Consensus 82 ~~dh-TvL~eLe~~----p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 82 YCDH-TVLHELERY----PNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred ecch-HHHHHHHhc----cCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 9998 555555543 245889999999999999999999999 99999999999999999999999999998864
Q ss_pred CccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... ..+..+.|.+|+|||.+.+ ..|....||||.||++.||++|...|.|..+-+. ++ .+...+.+-.
T Consensus 154 pgd--------~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQ--Ly-~I~ktLG~L~ 222 (396)
T KOG0593|consen 154 PGD--------NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQ--LY-LIRKTLGNLI 222 (396)
T ss_pred Ccc--------hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHH--HH-HHHHHHcccC
Confidence 321 2344678999999999988 7899999999999999999999999998765432 22 2222222211
Q ss_pred HH--------hhhhcccCCc------cCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 594 VR--------EKLRGFIDPS------LRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 594 ~~--------~~l~~~~d~~------l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+ ....++.-|. +...+| .....+.++++.||+.||.+|++.++++.+
T Consensus 223 prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 223 PRHQSIFSSNPFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred HHHHHHhccCCceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 11 0111111111 111222 233468899999999999999999998753
No 24
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=9.1e-39 Score=340.84 Aligned_cols=255 Identities=29% Similarity=0.450 Sum_probs=199.2
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE-------CCCeeEEEEecc--------cHHHHHHHHHhc-CCCCceeEeeE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF-------KGDDAAVKVMKG--------DVSSEINILKKI-NHSNIIRLSGF 422 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~-------~g~~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~g~ 422 (669)
.|.+.+ ++|.|+| |.||+|.. .+..||||+++. .+.+|+.++.++ +||||++++++
T Consensus 8 ~~~~~~-~lG~G~f-------g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (338)
T cd05102 8 RLRLGK-VLGHGAF-------GKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGA 79 (338)
T ss_pred Hceeee-EeccCCc-------ceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeE
Confidence 344444 3899999 99999975 245799999853 366899999999 89999999999
Q ss_pred EEecC-ceeEEEEecCCCCHHHHHhcCCCC--------------------------------------------------
Q 005923 423 CVHEG-NTYLVYEFADNGALSDWLHSNRYQ-------------------------------------------------- 451 (669)
Q Consensus 423 ~~~~~-~~~lV~e~~~~gsL~~~l~~~~~~-------------------------------------------------- 451 (669)
|...+ ..++||||+++|+|.+++...+..
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T cd05102 80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP 159 (338)
T ss_pred ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence 87654 579999999999999999753210
Q ss_pred -------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCccc
Q 005923 452 -------TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524 (669)
Q Consensus 452 -------~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 524 (669)
....+++..+++++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....... .
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~------~ 230 (338)
T cd05102 160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD------Y 230 (338)
T ss_pred chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcc------h
Confidence 0135889999999999999999999998 99999999999999999999999999986543221 1
Q ss_pred ceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccC
Q 005923 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFID 603 (669)
Q Consensus 525 ~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 603 (669)
.......++..|+|||.+.+..++.++||||||+++|||++ |..||.+....+. +...+..
T Consensus 231 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~------~~~~~~~------------ 292 (338)
T cd05102 231 VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE------FCQRLKD------------ 292 (338)
T ss_pred hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH------HHHHHhc------------
Confidence 11223456778999999999999999999999999999997 9999876432110 0001100
Q ss_pred CccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcC
Q 005923 604 PSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSS 649 (669)
Q Consensus 604 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 649 (669)
......+..++..+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 293 -~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 293 -GTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred -CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 001122334556789999999999999999999999999998753
No 25
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-39 Score=340.62 Aligned_cols=235 Identities=24% Similarity=0.446 Sum_probs=203.7
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
++|.|.- |.||.+.- .++.||||.|.. -+..|+.+|+..+|+|||+++..+..++++|+|||||
T Consensus 280 kigqgaS-------G~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 280 KIGQGAT-------GGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhccccc-------cceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 6899988 99999987 577899999842 3678999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
++|+|.|.+... .+++.++..|+++++.||+|||.++ |+|||||++|||++.++.+||+|||++..+....
T Consensus 353 ~ggsLTDvVt~~------~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 353 EGGSLTDVVTKT------RMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred CCCchhhhhhcc------cccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 999999999764 4999999999999999999999999 9999999999999999999999999998876543
Q ss_pred cccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHh
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVRE 596 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (669)
. ....++||+.|||||++....|.+|.||||||++++||+-|+.||..+....+..+
T Consensus 424 ~--------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyL--------------- 480 (550)
T KOG0578|consen 424 S--------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL--------------- 480 (550)
T ss_pred C--------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHH---------------
Confidence 2 23458999999999999999999999999999999999999999987554322111
Q ss_pred hhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 597 KLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 597 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+. .........++.+...+.+++.+||+.|+.+||++.|+|++
T Consensus 481 -Ia--~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 481 -IA--TNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred -Hh--hcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 11 11222345667788899999999999999999999999975
No 26
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-39 Score=327.01 Aligned_cols=232 Identities=28% Similarity=0.407 Sum_probs=194.9
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
|++..+ +|.|+| |+||..+- .++.+|+|+|+. ....|..+|.+++||.||+++-.|.+.+
T Consensus 27 F~~lkv-iGkG~f-------GkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~ 98 (357)
T KOG0598|consen 27 FEILKV-IGKGSF-------GKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE 98 (357)
T ss_pred eeeeee-eeccCC-------ceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC
Confidence 444343 899999 99999876 477899999964 2567999999999999999999999999
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
.+|||+||+.||.|..+|.+. +.+++....-++.+|+.||.|||+++ ||||||||+|||+|++|+++|+|||
T Consensus 99 kLylVld~~~GGeLf~hL~~e-----g~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFg 170 (357)
T KOG0598|consen 99 KLYLVLDYLNGGELFYHLQRE-----GRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFG 170 (357)
T ss_pred eEEEEEeccCCccHHHHHHhc-----CCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccc
Confidence 999999999999999999765 46899999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
|++...... ..++..+||+.|||||++.+..|+..+|+||+|+++|||++|..||.+.+... ....
T Consensus 171 L~k~~~~~~--------~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~------~~~~ 236 (357)
T KOG0598|consen 171 LCKEDLKDG--------DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK------MYDK 236 (357)
T ss_pred cchhcccCC--------CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH------HHHH
Confidence 999654332 34566899999999999999999999999999999999999999999765321 1111
Q ss_pred HHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC
Q 005923 588 VLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS 635 (669)
Q Consensus 588 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 635 (669)
++ ... ....|.-...+.++++++.|..||.+|..
T Consensus 237 I~-------------~~k-~~~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 237 IL-------------KGK-LPLPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred Hh-------------cCc-CCCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 11 111 12233345667899999999999999963
No 27
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-39 Score=330.53 Aligned_cols=246 Identities=31% Similarity=0.453 Sum_probs=200.0
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc-------HHHHHHHHHhcCCCCceeEeeEEEecC--c
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD-------VSSEINILKKINHSNIIRLSGFCVHEG--N 428 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~-------~~~E~~~l~~l~H~niv~l~g~~~~~~--~ 428 (669)
+...++ +|.|.| |+||++... |+..|||.+... +.+|+.+|++++|||||+.+|...... .
T Consensus 19 ~~~~~~-lG~Gs~-------G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~ 90 (313)
T KOG0198|consen 19 WSKGKL-LGRGSF-------GSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDE 90 (313)
T ss_pred hhhhcc-ccCccc-------eEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCee
Confidence 333443 899999 999999985 789999998654 789999999999999999999855444 6
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC-CCcEEEcccC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT-NLRAKITNFG 507 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~-~~~~kl~DfG 507 (669)
++++|||+++|+|.+++.+.+ +.|++..+.++..||++||+|||+++ ||||||||+|||++. ++.+||+|||
T Consensus 91 ~~i~mEy~~~GsL~~~~~~~g----~~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG 163 (313)
T KOG0198|consen 91 YNIFMEYAPGGSLSDLIKRYG----GKLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFG 163 (313)
T ss_pred eEeeeeccCCCcHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCc
Confidence 899999999999999998752 26999999999999999999999999 999999999999999 7999999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCC-chhHHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGD-QNCEAELLYASI 585 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~-~~~~~~~~~~~~ 585 (669)
+++....... .........||+.|||||++..+ ....++|||||||++.||+||+.||... ... ..+
T Consensus 164 ~a~~~~~~~~-----~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~------~~~ 232 (313)
T KOG0198|consen 164 LAKKLESKGT-----KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEA------EAL 232 (313)
T ss_pred cccccccccc-----cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchH------HHH
Confidence 9997764111 01224457899999999999964 3445999999999999999999998752 110 001
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
+....+. .....|..++.+..+++.+|+..||++|||++|++.+--
T Consensus 233 ------------~~ig~~~-~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 233 ------------LLIGRED-SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred ------------HHHhccC-CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 1111111 123667778888999999999999999999999998854
No 28
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-39 Score=339.28 Aligned_cols=246 Identities=30% Similarity=0.554 Sum_probs=200.8
Q ss_pred HHHhCCCCcccceeeEEEEEEECCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
+||.|+| |+||||.|.| +||||+++. .|.+|+.++++-+|.||+-+.|||..... .+|..++
T Consensus 399 rIGsGsF-------GtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwC 469 (678)
T KOG0193|consen 399 RIGSGSF-------GTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWC 469 (678)
T ss_pred eeccccc-------cceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhc
Confidence 4799999 9999999976 479999963 48899999999999999999999977766 9999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
+|-+|+.+||-.+ ..|...+.+.||.|||.||.|||.++ |||||||+.|||+.+++++||+||||+..-....
T Consensus 470 eGsSLY~hlHv~e----tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~ 542 (678)
T KOG0193|consen 470 EGSSLYTHLHVQE----TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWS 542 (678)
T ss_pred cCchhhhhccchh----hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceeeeeeec
Confidence 9999999998653 46888999999999999999999999 9999999999999999999999999997654331
Q ss_pred cccCCcccceeeeccccccccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIEN---GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
. .+-.....|...|||||+++. ..|++.+||||||+|+|||++|..||..... + ..++.
T Consensus 543 g------~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~-d-qIifm---------- 604 (678)
T KOG0193|consen 543 G------EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR-D-QIIFM---------- 604 (678)
T ss_pred c------ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh-h-heEEE----------
Confidence 1 122334567889999999964 5789999999999999999999999984332 1 11110
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcC
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSS 649 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 649 (669)
.-++...+.+ .....+++.+|.+|+..||..++++||.+.+|+..|+.+.-+
T Consensus 605 ---VGrG~l~pd~-s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 605 ---VGRGYLMPDL-SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred ---ecccccCccc-hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 0011111111 122346788999999999999999999999999999888763
No 29
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-39 Score=341.48 Aligned_cols=239 Identities=29% Similarity=0.477 Sum_probs=207.2
Q ss_pred HHHhCCCCcccceeeEEEEEEEC---CC--eeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK---GD--DAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~---g~--~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
++|.|+| |.|++|.|+ |+ .||||.++. +|.+|+.+|.+|+|+|+++|+|+..+ ....||
T Consensus 117 ~LG~GsF-------gvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV 188 (1039)
T KOG0199|consen 117 LLGEGSF-------GVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV 188 (1039)
T ss_pred HhcCcce-------eeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence 4999999 999999994 44 579999874 68999999999999999999999976 788999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
||+++.|||.+.|++. ....|-...+-.++.|||.||.||.+++ +|||||.++|+||-..-.+||+||||.|.+
T Consensus 189 ~ELaplGSLldrLrka---~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRKA---KKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRAL 262 (1039)
T ss_pred hhhcccchHHHHHhhc---cccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceecc
Confidence 9999999999999873 3456778888999999999999999999 999999999999999999999999999998
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
...+.. ..+..+..-...|+|||.+..+.|+.++|||+|||++|||+| |++||.|-....
T Consensus 263 g~ned~-----Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q-------------- 323 (1039)
T KOG0199|consen 263 GENEDM-----YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ-------------- 323 (1039)
T ss_pred CCCCcc-----eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH--------------
Confidence 765532 345556667789999999999999999999999999999999 888988755321
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
+-+.+|.+-+.+.|..|++.++++|+.||..+|++|||+..|.+.+
T Consensus 324 ------IL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 324 ------ILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ------HHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 2223445556778889999999999999999999999999998554
No 30
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5e-38 Score=302.74 Aligned_cols=255 Identities=26% Similarity=0.372 Sum_probs=206.3
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCc
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGN 428 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 428 (669)
|...+ ++|+|.| |.||+|.. .|+.||||+++- ...+|++.|+.++|+||+.|+++|-+.+.
T Consensus 4 Y~~~~-~lGEG~~-------gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~ 75 (318)
T KOG0659|consen 4 YEKLE-KLGEGTY-------GVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSN 75 (318)
T ss_pred hhhhh-hhcCcce-------EEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCc
Confidence 44334 5999999 99999998 589999999863 35689999999999999999999999999
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
..||+|||+. +|...+++. ...|+..++..++.++++|++|||++. |+||||||.|+|++++|.+||+|||+
T Consensus 76 l~lVfEfm~t-dLe~vIkd~----~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 76 LSLVFEFMPT-DLEVVIKDK----NIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred eEEEEEeccc-cHHHHhccc----ccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccc
Confidence 9999999986 999999864 357999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
||.+..... ...+.+-|.+|+|||.+.| ..|+...|+||.|||+.||+-|..-|.|+.+-+ ....+.+
T Consensus 148 Ar~f~~p~~--------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDid---QL~~If~ 216 (318)
T KOG0659|consen 148 ARFFGSPNR--------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDID---QLSKIFR 216 (318)
T ss_pred hhccCCCCc--------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHH---HHHHHHH
Confidence 999876542 2234478999999999877 679999999999999999999988888876532 2234445
Q ss_pred HHhhhhHHh--hhhcc---------cCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 588 VLEESNVRE--KLRGF---------IDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 588 ~~~~~~~~~--~l~~~---------~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+..+...+ .+..+ -.+.+..-+ ..+...+.+|+..||..||.+|+|+.|++++
T Consensus 217 ~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf-~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 217 ALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLF-PAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HcCCCCcccCccccccccHHHHhcCCCCcccccc-ccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 554333221 11111 122222222 2344567999999999999999999999876
No 31
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-38 Score=322.06 Aligned_cols=256 Identities=24% Similarity=0.387 Sum_probs=204.1
Q ss_pred ccccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 357 LTLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 357 ~~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
...|++.+. +|.|.- +.||+|.. .++.||||++.- .+.+|+..|+.++||||++++..|..+
T Consensus 25 ~~~YeL~e~-IG~G~s-------a~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 25 AKDYELQEV-IGVGAS-------AVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD 96 (516)
T ss_pred ccceeEEEE-Eeccce-------eEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence 355777664 888877 89999998 578999999852 477899999999999999999999999
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
..+|+||.||.+||+.+.++..- ...+.+..+..|.+++++||.|||.+| .||||||+.||||+++|.+||+||
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~---~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadF 170 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYY---PDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADF 170 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHc---cccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCc
Confidence 99999999999999999998752 234999999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCccccCCccccee-eeccccccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLT-RHVVGTYGYMAPEYIEN--GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~-~~~~gt~~y~aPE~l~~--~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
|.+..+..... +.... .+.+||+.|||||++.. ..|+.|+||||||++..||.+|..||...... +.+.
T Consensus 171 gvsa~l~~~G~-----R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm--kvLl- 242 (516)
T KOG0582|consen 171 GVSASLFDSGD-----RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM--KVLL- 242 (516)
T ss_pred eeeeeecccCc-----eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH--HHHH-
Confidence 99987765431 12222 67899999999999654 67999999999999999999999999864432 1221
Q ss_pred HHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.-++.....- ....+..+........+.+++..||++||.+|||++++++.
T Consensus 243 ---~tLqn~pp~~-----~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 243 ---LTLQNDPPTL-----LTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred ---HHhcCCCCCc-----ccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 1122111000 00011122223444578999999999999999999998864
No 32
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=6.8e-38 Score=322.53 Aligned_cols=246 Identities=27% Similarity=0.436 Sum_probs=199.2
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC-----CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-----GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-----g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
.|++.++ +|+|+| |.||+|.++ +..+|+|.++. .+.+|+.++++++||||++++|++..
T Consensus 6 ~~~~~~~-ig~G~f-------g~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 77 (266)
T cd05064 6 SIKIERI-LGTGRF-------GELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR 77 (266)
T ss_pred HeEEeee-ecccCC-------CeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec
Confidence 3555554 899999 999999863 45789998763 36689999999999999999999999
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcc
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 505 (669)
++..++||||+++|+|.+++... ...++|.+++.++.|++.||+|||+++ ++||||||+|||++.++.+|++|
T Consensus 78 ~~~~~lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~d 150 (266)
T cd05064 78 GNTMMIVTEYMSNGALDSFLRKH----EGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISG 150 (266)
T ss_pred CCCcEEEEEeCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECC
Confidence 99999999999999999999754 246899999999999999999999999 99999999999999999999999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 584 (669)
||.+........ .......++..|+|||.+.+..++.++||||||+++||+++ |+.||.+....+ ...
T Consensus 151 fg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~- 219 (266)
T cd05064 151 FRRLQEDKSEAI-------YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIK- 219 (266)
T ss_pred Ccccccccccch-------hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHH-
Confidence 998765432210 11122345678999999999999999999999999999875 999997654321 000
Q ss_pred HHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
.+. .......+..++..+.+++.+||+.+|.+||+++||.+.|+++
T Consensus 220 ---~~~-------------~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 220 ---AVE-------------DGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ---HHH-------------CCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 011 0111233455667899999999999999999999999999876
No 33
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.1e-37 Score=323.48 Aligned_cols=250 Identities=28% Similarity=0.509 Sum_probs=202.1
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEECC-------CeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKG-------DDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCV 424 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g-------~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~ 424 (669)
|++.+ .+|.|+| |.||+|...+ ..+++|.++. ++.+|++++.+++||||+++++++.
T Consensus 7 ~~~~~-~lg~G~~-------g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~ 78 (283)
T cd05048 7 VRFLE-ELGEGAF-------GKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT 78 (283)
T ss_pred cchhh-cccCccC-------CcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc
Confidence 44444 4899999 9999998743 3589998853 3678999999999999999999999
Q ss_pred ecCceeEEEEecCCCCHHHHHhcCCCCCC-----------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCe
Q 005923 425 HEGNTYLVYEFADNGALSDWLHSNRYQTS-----------DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493 (669)
Q Consensus 425 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~-----------~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NI 493 (669)
..+..+++|||+++|+|.+++........ ..+++..++.++.|++.||+|||+.+ ++||||||+||
T Consensus 79 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Ni 155 (283)
T cd05048 79 KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNC 155 (283)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceE
Confidence 88999999999999999999976421111 46899999999999999999999999 99999999999
Q ss_pred eecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCC
Q 005923 494 LLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTG 572 (669)
Q Consensus 494 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~ 572 (669)
++++++.+||+|||+++....... ........++..|+|||.+.++.++.++|||||||++|||++ |..||.+
T Consensus 156 l~~~~~~~~L~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~ 229 (283)
T cd05048 156 LVGEGLTVKISDFGLSRDIYSADY------YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYG 229 (283)
T ss_pred EEcCCCcEEECCCcceeecccccc------ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999986543321 112233456788999999999999999999999999999998 9999876
Q ss_pred CchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 573 DQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
....+. .. .+. .......+.+++.++.+|+.+||+.||++||++.||++.|+++
T Consensus 230 ~~~~~~---~~-------------~i~----~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 230 FSNQEV---IE-------------MIR----SRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred CCHHHH---HH-------------HHH----cCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 443210 00 010 1111234556678899999999999999999999999999753
No 34
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.2e-38 Score=325.11 Aligned_cols=239 Identities=36% Similarity=0.644 Sum_probs=189.9
Q ss_pred HHHhCCCCcccceeeEEEEEEEC------CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK------GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~------g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
.+|.|.| |.||+|.++ +..|+||.++. ++.+|++.+++++||||++++|+|.+.+..++
T Consensus 6 ~ig~G~f-------g~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 6 QIGEGSF-------GKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEESS-------EEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEE
T ss_pred EEccCCC-------cEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccc
Confidence 3899999 999999997 56799999953 47789999999999999999999998888999
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
||||+++|+|.++|+.. ....+++.++.+|+.||+.||.|||+.+ ++|+||+++|||+++++.+||+|||+++.
T Consensus 79 v~e~~~~g~L~~~L~~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~ 152 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSK---NKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRP 152 (259)
T ss_dssp EEE--TTEBHHHHHHHT---CTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEE
T ss_pred ccccccccccccccccc---cccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 99999999999999875 2356999999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
...... ............|+|||.+....++.++||||||+++|||++ |+.|+......+ ....+ .
T Consensus 153 ~~~~~~------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~------~~~~~-~ 219 (259)
T PF07714_consen 153 ISEKSK------YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE------IIEKL-K 219 (259)
T ss_dssp TTTSSS------EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH------HHHHH-H
T ss_pred cccccc------ccccccccccccccccccccccccccccccccccccccccccccccccccccccc------ccccc-c
Confidence 732221 112223456778999999999999999999999999999999 678876543211 00011 0
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
...+...+..++..+.+++.+||+.||.+||++.|+++.|
T Consensus 220 -------------~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 220 -------------QGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -------------TTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -------------ccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1112234445667789999999999999999999999886
No 35
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.9e-37 Score=371.52 Aligned_cols=254 Identities=31% Similarity=0.497 Sum_probs=202.5
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCCCC
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGA 440 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 440 (669)
.+|.|+| |.||+|.. ++..||||.++. ....|++++++++|||||+++|+|.+++..++||||+++|+
T Consensus 697 ~ig~G~~-------g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~ 769 (968)
T PLN00113 697 VISRGKK-------GASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKN 769 (968)
T ss_pred EEccCCC-------eeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCc
Confidence 3899999 99999996 578999998864 23568999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccC
Q 005923 441 LSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520 (669)
Q Consensus 441 L~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 520 (669)
|.++++. ++|..+.+|+.|++.||+|||+...++++||||||+||+++.++..++. ||........
T Consensus 770 L~~~l~~--------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~----- 835 (968)
T PLN00113 770 LSEVLRN--------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD----- 835 (968)
T ss_pred HHHHHhc--------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC-----
Confidence 9999952 8999999999999999999997655669999999999999999988876 6655433211
Q ss_pred CcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhc
Q 005923 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRG 600 (669)
Q Consensus 521 ~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 600 (669)
....++..|+|||++.+..++.++|||||||++|||++|+.|+....... .....+....... .....
T Consensus 836 -------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~----~~~~~ 903 (968)
T PLN00113 836 -------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVH-GSIVEWARYCYSD----CHLDM 903 (968)
T ss_pred -------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCC-CcHHHHHHHhcCc----cchhh
Confidence 11357889999999999999999999999999999999999986432211 1111222211111 12344
Q ss_pred ccCCccCC--CCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCCC
Q 005923 601 FIDPSLRN--EYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSSD 652 (669)
Q Consensus 601 ~~d~~l~~--~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 652 (669)
++|+.+.. ..+.+...++.+++.+||+.||.+||||+||++.|+++...+.+
T Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~~ 957 (968)
T PLN00113 904 WIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSSS 957 (968)
T ss_pred eeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccccc
Confidence 55655533 33456667789999999999999999999999999999776554
No 36
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3e-37 Score=324.06 Aligned_cols=256 Identities=27% Similarity=0.457 Sum_probs=196.6
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC------------------CCeeEEEEecc--------cHHHHHHHHHhcC
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK------------------GDDAAVKVMKG--------DVSSEINILKKIN 412 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~------------------g~~vavK~~~~--------~~~~E~~~l~~l~ 412 (669)
.|.+.+ ++|.|+| |.||++.++ +..||+|.++. ++.+|++++.+++
T Consensus 6 ~~~~~~-~lg~G~f-------g~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (304)
T cd05096 6 HLLFKE-KLGEGQF-------GEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLK 77 (304)
T ss_pred hCeeee-EecccCC-------eEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcC
Confidence 344545 4899999 999999753 23589999853 4678999999999
Q ss_pred CCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCC--------------CCCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 005923 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRY--------------QTSDNLTWKQRVQIAYDVANALNYLHKY 478 (669)
Q Consensus 413 H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------------~~~~~l~~~~~~~i~~qia~~L~yLH~~ 478 (669)
||||+++++++.+.+..++||||+++|+|.+++..... .....++|..+++++.||+.||.|||+.
T Consensus 78 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~ 157 (304)
T cd05096 78 DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL 157 (304)
T ss_pred CCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999965421 1123578999999999999999999999
Q ss_pred CCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHH
Q 005923 479 TNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGV 558 (669)
Q Consensus 479 ~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gv 558 (669)
+ |+||||||+|||+++++.+||+|||+++....... ........++..|+|||++.++.++.++||||||+
T Consensus 158 ~---ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 228 (304)
T cd05096 158 N---FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY------YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGV 228 (304)
T ss_pred C---ccccCcchhheEEcCCccEEECCCccceecccCce------eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHH
Confidence 9 99999999999999999999999999986643321 11223345678899999999999999999999999
Q ss_pred HHHHHHc--CCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCH
Q 005923 559 VVLELLS--GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636 (669)
Q Consensus 559 vl~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 636 (669)
++|||++ +..|+.+....+ ....+...+.. ... ......+..++..+.+++.+||+.||.+|||+
T Consensus 229 ~l~el~~~~~~~p~~~~~~~~---~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~ 295 (304)
T cd05096 229 TLWEILMLCKEQPYGELTDEQ---VIENAGEFFRD-----QGR-----QVYLFRPPPCPQGLYELMLQCWSRDCRERPSF 295 (304)
T ss_pred HHHHHHHccCCCCCCcCCHHH---HHHHHHHHhhh-----ccc-----cccccCCCCCCHHHHHHHHHHccCCchhCcCH
Confidence 9999987 455665433211 11111111110 000 00111233455678999999999999999999
Q ss_pred HHHHHHHH
Q 005923 637 SEVFVTLS 644 (669)
Q Consensus 637 ~evl~~L~ 644 (669)
.||.+.|+
T Consensus 296 ~~i~~~l~ 303 (304)
T cd05096 296 SDIHAFLT 303 (304)
T ss_pred HHHHHHHh
Confidence 99998886
No 37
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=8.1e-37 Score=327.93 Aligned_cols=233 Identities=26% Similarity=0.422 Sum_probs=185.6
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
++|.|.| |.||++... ++.||||++.. .+.+|++++++++|+||+++++++..++..++||||
T Consensus 81 ~lg~G~~-------g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 81 RIGSGAG-------GTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred hccCCCC-------eEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 4899999 999999984 78999999842 367899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+++|+|.+.. .+.+..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 154 ~~~~~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 154 MDGGSLEGTH---------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred CCCCcccccc---------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 9999986532 2567788899999999999999999 999999999999999999999999999876432
Q ss_pred ccccCCcccceeeeccccccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIEN-----GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
.. ......||..|+|||.+.. ...+.++|||||||++|||++|+.||......+.......
T Consensus 222 ~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~------ 287 (353)
T PLN00034 222 MD--------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCA------ 287 (353)
T ss_pred cc--------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH------
Confidence 11 1233578999999998843 2345689999999999999999999974322111110000
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+. .......+..+..++.+|+.+||+.||.+|||+.|++++
T Consensus 288 -------~~----~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 288 -------IC----MSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred -------Hh----ccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 001122233455678999999999999999999999976
No 38
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.7e-37 Score=335.74 Aligned_cols=252 Identities=27% Similarity=0.448 Sum_probs=198.3
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE-------CCCeeEEEEecc--------cHHHHHHHHHhc-CCCCceeEeeE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF-------KGDDAAVKVMKG--------DVSSEINILKKI-NHSNIIRLSGF 422 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~-------~g~~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~g~ 422 (669)
.|++.+ .+|.|+| |.||++.. .+..||||+++. .+.+|+++|..+ +||||++++++
T Consensus 36 ~~~~~~-~LG~G~f-------G~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~ 107 (375)
T cd05104 36 RLSFGK-TLGAGAF-------GKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGA 107 (375)
T ss_pred Heehhh-eecCCcc-------ceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeee
Confidence 456655 4999999 99999974 244799999863 356899999999 89999999999
Q ss_pred EEecCceeEEEEecCCCCHHHHHhcCCC----------------------------------------------------
Q 005923 423 CVHEGNTYLVYEFADNGALSDWLHSNRY---------------------------------------------------- 450 (669)
Q Consensus 423 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------- 450 (669)
|..++..++||||+++|+|.++++..+.
T Consensus 108 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
T cd05104 108 CTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRR 187 (375)
T ss_pred eccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccc
Confidence 9999999999999999999999975321
Q ss_pred ------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 451 ------------------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 451 ------------------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
.....++|..+++++.||+.||+|||+.+ ++||||||+|||+++++.+||+|||+++..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 264 (375)
T cd05104 188 SVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDI 264 (375)
T ss_pred ccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceec
Confidence 01125889999999999999999999998 999999999999999999999999999876
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... ........++..|+|||.+.+..++.++||||||+++|||++ |..||....... ... ..+.
T Consensus 265 ~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~----~~~~- 331 (375)
T cd05104 265 RNDSN------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFY----KMIK- 331 (375)
T ss_pred cCccc------ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHH----HHHH-
Confidence 43321 011122345678999999999999999999999999999998 888886543211 100 1111
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
...+...+...+.++.+|+.+||+.||.+||++.||++.|++.
T Consensus 332 ------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 332 ------------EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ------------hCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 1111122223356789999999999999999999999999864
No 39
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.8e-37 Score=335.49 Aligned_cols=253 Identities=25% Similarity=0.409 Sum_probs=199.2
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC-------CCeeEEEEecc--------cHHHHHHHHHhc-CCCCceeEeeE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------GDDAAVKVMKG--------DVSSEINILKKI-NHSNIIRLSGF 422 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-------g~~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~g~ 422 (669)
.|.+.+ .+|.|+| |.||++... +..||+|.++. .+.+|+++++++ +|+||++++++
T Consensus 39 ~~~~~~-~LG~G~f-------g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~ 110 (374)
T cd05106 39 NLQFGK-TLGAGAF-------GKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGA 110 (374)
T ss_pred Hceehh-eecCCCc-------ccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeE
Confidence 355554 3899999 999998852 24799999863 356899999999 89999999999
Q ss_pred EEecCceeEEEEecCCCCHHHHHhcCCC----------------------------------------------------
Q 005923 423 CVHEGNTYLVYEFADNGALSDWLHSNRY---------------------------------------------------- 450 (669)
Q Consensus 423 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------- 450 (669)
|...+..++||||+++|+|.++++....
T Consensus 111 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 111 CTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred ecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 9999999999999999999999965310
Q ss_pred -------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCcc
Q 005923 451 -------------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517 (669)
Q Consensus 451 -------------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~ 517 (669)
.....+++.++++|+.||+.||+|||+++ ++||||||+|||+++++.+||+|||+++.......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcc
Confidence 01235889999999999999999999998 99999999999999999999999999986543221
Q ss_pred ccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhhhHHh
Q 005923 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVRE 596 (669)
Q Consensus 518 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (669)
........++..|+|||++.+..++.++||||||+++|||++ |+.||....... .. ....
T Consensus 268 ------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--~~----~~~~------- 328 (374)
T cd05106 268 ------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--KF----YKMV------- 328 (374)
T ss_pred ------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--HH----HHHH-------
Confidence 111222345678999999999999999999999999999997 999987543211 00 0000
Q ss_pred hhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 597 KLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 597 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
........+...+.++.+++.+||+.||.+|||+.||++.|+++.
T Consensus 329 ------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 329 ------KRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ------HcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 011111222233567899999999999999999999999999875
No 40
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=4e-37 Score=309.54 Aligned_cols=246 Identities=24% Similarity=0.398 Sum_probs=206.3
Q ss_pred HHhCCCCcccceeeEEEEEEEC-------CCeeEEEEeccc--------HHHHHHHHHhcCCCCceeEeeEEEecC-cee
Q 005923 367 IATGSFSEENRIQGSVYRGSFK-------GDDAAVKVMKGD--------VSSEINILKKINHSNIIRLSGFCVHEG-NTY 430 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~-------g~~vavK~~~~~--------~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~ 430 (669)
+.+|.| |.||+|.|. .+.|.||.++.. +..|--++..+.|||+..+.|++.++. ..+
T Consensus 292 lqEGtF-------Gri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~ 364 (563)
T KOG1024|consen 292 LQEGTF-------GRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPF 364 (563)
T ss_pred hhcCch-------hheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcce
Confidence 678999 999999763 335778888753 456888888889999999999998764 568
Q ss_pred EEEEecCCCCHHHHHhcCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 431 LVYEFADNGALSDWLHSNRY---QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~---~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
++|.++..|+|+.||...|. ...+.++..+++.++.|++.||+|||.++ +||.||.++|++||+..++||+|-.
T Consensus 365 V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~LqVkltDsa 441 (563)
T KOG1024|consen 365 VLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQLQVKLTDSA 441 (563)
T ss_pred EEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhheeEEeccch
Confidence 89999999999999984332 23356888999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 586 (669)
++|.+...++..-+. .--.+..||+||.+.+..|+..+|||||||+||||+| |+.|+..-++.|.+
T Consensus 442 LSRDLFP~DYhcLGD------nEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~------- 508 (563)
T KOG1024|consen 442 LSRDLFPGDYHCLGD------NENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME------- 508 (563)
T ss_pred hccccCcccccccCC------CCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH-------
Confidence 999987766544332 1234678999999999999999999999999999998 99998866654322
Q ss_pred HHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhc
Q 005923 587 RVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWS 648 (669)
Q Consensus 587 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 648 (669)
..+..+.|...|.+|+.+++.+|.-||..+|++||++++++.-|++...
T Consensus 509 -------------~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 509 -------------HYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred -------------HHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 2333456677888999999999999999999999999999999988753
No 41
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-38 Score=340.71 Aligned_cols=246 Identities=27% Similarity=0.475 Sum_probs=211.5
Q ss_pred HHHHHhCCCCcccceeeEEEEEEE--CCC----eeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 364 DLKIATGSFSEENRIQGSVYRGSF--KGD----DAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 364 ~l~~~~g~f~~~~~~~G~Vy~g~~--~g~----~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
+.++|.|.| |+||+|.| +|+ +||+|++.. ++.+|+.+|.+++|||+++|+|+|.... .
T Consensus 701 ~kvLGsgAf-------GtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ 772 (1177)
T KOG1025|consen 701 DKVLGSGAF-------GTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-L 772 (1177)
T ss_pred hceeccccc-------eeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-H
Confidence 335899999 99999998 443 689998853 4788999999999999999999997655 8
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
.||.+||+.|+|.||++.+| ..+-.+..+.|..|||+||.|||++. +|||||.++||||.+-..+||.|||++
T Consensus 773 qlvtq~mP~G~LlDyvr~hr----~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla 845 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHR----DNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLA 845 (1177)
T ss_pred HHHHHhcccchHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchh
Confidence 99999999999999999875 45888999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
+....+..+.. .....-.+.|||-|.+....|+.++|||||||++||++| |..|+++....
T Consensus 846 ~ll~~d~~ey~------~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~------------ 907 (1177)
T KOG1025|consen 846 KLLAPDEKEYS------APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE------------ 907 (1177)
T ss_pred hccCccccccc------ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH------------
Confidence 99877654332 122334678999999999999999999999999999999 99999875532
Q ss_pred HhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCC
Q 005923 589 LEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSS 650 (669)
Q Consensus 589 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 650 (669)
.+.+++....|...|..+...++.++.+||..|++.||+++|+...+.++....
T Consensus 908 --------eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 908 --------EIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred --------HhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 233344445567788899999999999999999999999999999999887554
No 42
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-37 Score=331.60 Aligned_cols=241 Identities=26% Similarity=0.419 Sum_probs=206.9
Q ss_pred ccccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEE
Q 005923 357 LTLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCV 424 (669)
Q Consensus 357 ~~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~ 424 (669)
+..|++.. .+|+|.- |.|-.|+. .|+.+|||++.. .+.+|+-+|+.+.||||++|+++++
T Consensus 11 iGpwkLgk-TLG~Gst-------g~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe 82 (786)
T KOG0588|consen 11 IGPWKLGK-TLGKGST-------GCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE 82 (786)
T ss_pred ccceeccc-cccCCCC-------ceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec
Confidence 34566655 5899998 99999987 599999999853 3789999999999999999999999
Q ss_pred ecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc
Q 005923 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504 (669)
Q Consensus 425 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 504 (669)
++.++|||.||+++|-|.++|... +.|++....++++||+.|+.|+|..+ |+||||||+|+|||...++||+
T Consensus 83 ~~~~lylvlEyv~gGELFdylv~k-----G~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIA 154 (786)
T KOG0588|consen 83 NKQHLYLVLEYVPGGELFDYLVRK-----GPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIA 154 (786)
T ss_pred cCceEEEEEEecCCchhHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeee
Confidence 999999999999999999999765 57999999999999999999999999 9999999999999999999999
Q ss_pred ccCCccccCCCccccCCcccceeeecccccccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVI-TPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
|||+|.....+ .+...-+|.+.|.|||++.+..| ..++||||.|||||.||+|+.||++++-. .++..
T Consensus 155 DFGMAsLe~~g---------klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir--~LLlK 223 (786)
T KOG0588|consen 155 DFGMASLEVPG---------KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR--VLLLK 223 (786)
T ss_pred ccceeecccCC---------ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH--HHHHH
Confidence 99999876543 34566799999999999999988 57899999999999999999999965421 11111
Q ss_pred HHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
.. +..-+.|...+.+..+|+++|+..||..|.|++||+++-
T Consensus 224 V~-------------------~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 224 VQ-------------------RGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HH-------------------cCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 11 112355677888899999999999999999999999873
No 43
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.3e-36 Score=312.26 Aligned_cols=241 Identities=28% Similarity=0.488 Sum_probs=198.4
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecC
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFAD 437 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~ 437 (669)
++|.|.| |.||+|..+ ++.+++|.++. ++.+|++++++++|+||+++++++..++..++||||++
T Consensus 13 ~ig~g~~-------~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 13 KLGGGQY-------GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred ecCCccc-------ceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 4899999 999999984 77899999864 36689999999999999999999999999999999999
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCcc
Q 005923 438 NGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517 (669)
Q Consensus 438 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~ 517 (669)
+|+|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++.......
T Consensus 86 ~~~L~~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 86 YGNLLDYLRECN---RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred CCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 999999997542 346899999999999999999999998 99999999999999999999999999987654321
Q ss_pred ccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhhhHHh
Q 005923 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVRE 596 (669)
Q Consensus 518 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (669)
. ......++..|+|||.+.+..++.++||||||+++|||++ |..|+.+....+ ....
T Consensus 160 ~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~~~------------ 217 (263)
T cd05052 160 T-------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYEL------------ 217 (263)
T ss_pred e-------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH------------
Confidence 1 1112234568999999999999999999999999999998 888887643211 1000
Q ss_pred hhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 597 KLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 597 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
+. .......+..++..+.+++.+||+.||.+||++.++++.|+.+
T Consensus 218 -~~----~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 218 -LE----KGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -HH----CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11 1112233445567899999999999999999999999999876
No 44
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-37 Score=300.81 Aligned_cols=220 Identities=29% Similarity=0.458 Sum_probs=194.0
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|+|+| |.|...+. +|..+|+|+++. ...+|..+|+.+.||++++|.+.|.+.+..+||||
T Consensus 52 lGtGSF-------GrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme 124 (355)
T KOG0616|consen 52 LGTGSF-------GRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME 124 (355)
T ss_pred eccCcc-------ceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence 799999 99999887 478899999864 24579999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|++||.|..+|++. +++++...+-+|.||+.||+|||+.+ |++|||||+|||+|.+|.+||.|||+|+....
T Consensus 125 yv~GGElFS~Lrk~-----~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 125 YVPGGELFSYLRKS-----GRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred ccCCccHHHHHHhc-----CCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999865 56999999999999999999999999 99999999999999999999999999997753
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.+...+||+.|+|||.+....+..++|.|||||++|||+.|..||..++...
T Consensus 197 -----------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~----------------- 248 (355)
T KOG0616|consen 197 -----------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ----------------- 248 (355)
T ss_pred -----------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH-----------------
Confidence 2567899999999999999999999999999999999999999999766421
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCC
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNAR 633 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R 633 (669)
...+++... -.+|..+...+.+|+...|+.|-.+|
T Consensus 249 --iY~KI~~~~--v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 249 --IYEKILEGK--VKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred --HHHHHHhCc--ccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 111222222 24677777889999999999999998
No 45
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.1e-36 Score=321.61 Aligned_cols=247 Identities=28% Similarity=0.501 Sum_probs=197.9
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCC----eeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGD----DAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~----~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
.+|+|+| |.||+|.+ +++ .||+|.++. ++.+|+.+++.++||||++++|+|.. +..++
T Consensus 14 ~lg~G~~-------g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~-~~~~~ 85 (316)
T cd05108 14 VLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQL 85 (316)
T ss_pred eeecCCC-------ceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC-CCcee
Confidence 3899999 99999987 333 389999752 36679999999999999999999975 46789
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
|+||+++|+|.++++... ..+++..+++++.||+.||+|||+.+ ++||||||+|||+++++.+||+|||+++.
T Consensus 86 v~e~~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeecCCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEcccccccc
Confidence 999999999999998642 45899999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
....... .......++..|+|||.+.+..++.++||||||+++|||++ |+.|+.+....+ +...+.
T Consensus 159 ~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~-------~~~~~~ 225 (316)
T cd05108 159 LGADEKE------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILE 225 (316)
T ss_pred ccCCCcc------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHh
Confidence 6543211 11112234678999999999999999999999999999998 999987643221 111111
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCCCC
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSSDW 653 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 653 (669)
. ......+..+...+.+++.+||+.||.+||++.+++..|.++......|
T Consensus 226 ~-------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~~~ 275 (316)
T cd05108 226 K-------------GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 275 (316)
T ss_pred C-------------CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCchh
Confidence 1 1111222334557899999999999999999999999999998766544
No 46
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.7e-37 Score=323.14 Aligned_cols=237 Identities=27% Similarity=0.465 Sum_probs=202.7
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----c-----HHHHHHHHHhcCCCCceeEeeEEEecCc
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----D-----VSSEINILKKINHSNIIRLSGFCVHEGN 428 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----~-----~~~E~~~l~~l~H~niv~l~g~~~~~~~ 428 (669)
|.+-| .+|.|.| |.||||+.+ .+.||+|.+.+ + +.+|++++++++|||||.++++|+...+
T Consensus 4 yhv~e-~iG~Gsf-------g~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~ 75 (808)
T KOG0597|consen 4 YHVYE-MIGEGSF-------GRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAH 75 (808)
T ss_pred hhHHH-HhcCCcc-------ceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccce
Confidence 44444 4999999 999999875 56799998742 2 7789999999999999999999999999
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
+++|.||+.+ +|..+|... +.|+++++..|+.|+..||.|||+.+ |.|||+||+|||++.++.+|++|||+
T Consensus 76 ~~vVte~a~g-~L~~il~~d-----~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 76 LWVVTEYAVG-DLFTILEQD-----GKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred EEEEehhhhh-hHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhh
Confidence 9999999986 999999765 56999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
||.+.... .+.+.+.||+.|||||.+.++.|+..+|.||+||++||+++|+.||.... ..+.+..+
T Consensus 147 Ar~m~~~t--------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s------i~~Lv~~I 212 (808)
T KOG0597|consen 147 ARAMSTNT--------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS------ITQLVKSI 212 (808)
T ss_pred hhhcccCc--------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH------HHHHHHHH
Confidence 99886543 35567899999999999999999999999999999999999999997532 11111111
Q ss_pred HhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 589 LEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 589 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+.+ + ..+|......+..++...|.+||.+|.|-.+++.+
T Consensus 213 ~~d------------~---v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 213 LKD------------P---VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred hcC------------C---CCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 111 1 23455777889999999999999999999998865
No 47
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2e-36 Score=313.84 Aligned_cols=247 Identities=27% Similarity=0.451 Sum_probs=195.9
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCC----eeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGD----DAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~----~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
.+|.|+| |.||+|.+ +++ .+++|.+.. ++..|+.++++++||||+++++++. +...++
T Consensus 14 ~lg~G~~-------~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 14 LLGSGVF-------GTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred ccCccCC-------cceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 3899999 99999998 344 477787742 3456777889999999999999985 456789
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
++||+++|+|.++++..+ ..++|..+..|+.||+.||+|||+.+ ++||||||+|||+++++.+||+|||+++.
T Consensus 86 i~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR----DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEeCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCcccee
Confidence 999999999999997542 46899999999999999999999998 99999999999999999999999999986
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
...... ........++..|+|||.+.++.++.++||||||+++|||++ |+.||.+...... ...++
T Consensus 159 ~~~~~~------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-------~~~~~ 225 (279)
T cd05111 159 LYPDDK------KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-------PDLLE 225 (279)
T ss_pred ccCCCc------ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-------HHHHH
Confidence 643221 111223456778999999999999999999999999999998 9999876443211 11111
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCCCC
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSSDW 653 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 653 (669)
. ......+..+...+.+++.+||..||.+|||+.|+++.|..+...+..|
T Consensus 226 ~-------------~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~~~ 275 (279)
T cd05111 226 K-------------GERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPPRY 275 (279)
T ss_pred C-------------CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCcce
Confidence 1 0111112233456789999999999999999999999999988766554
No 48
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=324.75 Aligned_cols=243 Identities=27% Similarity=0.445 Sum_probs=201.9
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc------------HHHHHHHHHhcC-CCCceeEeeE
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD------------VSSEINILKKIN-HSNIIRLSGF 422 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~------------~~~E~~~l~~l~-H~niv~l~g~ 422 (669)
..|.+.. .+|.|.| |+|+.|.. .+..||+|++..+ +.+|+.++++++ ||||++++.+
T Consensus 17 g~y~~~~-~lG~Gsf-------gkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev 88 (370)
T KOG0583|consen 17 GKYELGR-TLGSGSF-------GKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEV 88 (370)
T ss_pred Cceeeee-eecCCCC-------eeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEE
Confidence 4555555 4999999 99999987 5889999976432 347999999999 9999999999
Q ss_pred EEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC-CcE
Q 005923 423 CVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN-LRA 501 (669)
Q Consensus 423 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~-~~~ 501 (669)
+......++||||+.+|+|.+++.+. +++.+....+++.|++.|++|||+++ |+||||||+|||+|.+ +++
T Consensus 89 ~~t~~~~~ivmEy~~gGdL~~~i~~~-----g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~ 160 (370)
T KOG0583|consen 89 FATPTKIYIVMEYCSGGDLFDYIVNK-----GRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNL 160 (370)
T ss_pred EecCCeEEEEEEecCCccHHHHHHHc-----CCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCE
Confidence 99999999999999999999999863 56889999999999999999999999 9999999999999999 999
Q ss_pred EEcccCCccccC-CCccccCCcccceeeecccccccccccccccCC-CC-chhhHHHHHHHHHHHHcCCCCCCCCchhHH
Q 005923 502 KITNFGLARSAE-SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV-IT-PKLDVFAFGVVVLELLSGREAVTGDQNCEA 578 (669)
Q Consensus 502 kl~DfGla~~~~-~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~s-~~sDV~S~Gvvl~elltg~~p~~~~~~~~~ 578 (669)
||+|||++.... .+ .......||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||...+...
T Consensus 161 Kl~DFG~s~~~~~~~---------~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~- 230 (370)
T KOG0583|consen 161 KLSDFGLSAISPGED---------GLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN- 230 (370)
T ss_pred EEeccccccccCCCC---------CcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH-
Confidence 999999999874 22 2345679999999999999977 75 78999999999999999999998744211
Q ss_pred HHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHH-HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDL-AFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~-~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
+... +... .-.+|..+ ..++..|+.+|+..||.+|+|+.||+ .-.-+.
T Consensus 231 --l~~k----------------i~~~--~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~ 279 (370)
T KOG0583|consen 231 --LYRK----------------IRKG--EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQ 279 (370)
T ss_pred --HHHH----------------HhcC--CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh-hChhhc
Confidence 1111 1111 12344445 77889999999999999999999999 433333
No 49
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2e-36 Score=315.76 Aligned_cols=256 Identities=25% Similarity=0.428 Sum_probs=203.9
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC-------CCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK-------GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-------g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
|.+.+ .++.|+| |.||++... +..+++|.++. .+.+|++++++++|+||+++++++..
T Consensus 7 ~~~~~-~lg~g~~-------g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (291)
T cd05094 7 IVLKR-ELGEGAF-------GKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGD 78 (291)
T ss_pred eEEee-eecccCC-------CeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc
Confidence 44443 4899999 999999853 34588998863 46789999999999999999999999
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCee
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRY-----------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NIL 494 (669)
.+..++||||+++++|.+++..+.. .....++|..++.++.||+.||+|||+++ ++||||||+|||
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil 155 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCL 155 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEE
Confidence 9999999999999999999976421 12245899999999999999999999999 999999999999
Q ss_pred ecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCC
Q 005923 495 LDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGD 573 (669)
Q Consensus 495 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~ 573 (669)
+++++.+||+|||+++....... ........++..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 156 ~~~~~~~~l~dfg~a~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 229 (291)
T cd05094 156 VGANLLVKIGDFGMSRDVYSTDY------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL 229 (291)
T ss_pred EccCCcEEECCCCcccccCCCce------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999986543321 111223456788999999999999999999999999999999 99998754
Q ss_pred chhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCCC
Q 005923 574 QNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSSD 652 (669)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 652 (669)
...+. .. ... . ......+..++..+.+++.+||+.||.+||++++|++.|+++...+..
T Consensus 230 ~~~~~---~~----~~~------------~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~~~ 288 (291)
T cd05094 230 SNTEV---IE----CIT------------Q-GRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKATPI 288 (291)
T ss_pred CHHHH---HH----HHh------------C-CCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhcCc
Confidence 43210 00 000 0 001112233456789999999999999999999999999999876554
No 50
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.4e-36 Score=310.66 Aligned_cols=238 Identities=23% Similarity=0.470 Sum_probs=193.1
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-CCeeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCC
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADN 438 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 438 (669)
++|.|+| |.||++.++ +..+|+|.++. ++.+|++++++++||||+++++++..++..++||||+++
T Consensus 11 ~lg~G~~-------~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 11 ELGSGQF-------GVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred EecCCcC-------ceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 4899999 999999985 45789998753 467899999999999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccc
Q 005923 439 GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518 (669)
Q Consensus 439 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~ 518 (669)
|+|.++++... ..++|..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++.......
T Consensus 84 ~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~- 155 (256)
T cd05114 84 GCLLNYLRQRQ----GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY- 155 (256)
T ss_pred CcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCce-
Confidence 99999997542 35899999999999999999999999 99999999999999999999999999986543221
Q ss_pred cCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhhhHHhh
Q 005923 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREK 597 (669)
Q Consensus 519 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (669)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+. ... ....
T Consensus 156 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~---~~~---i~~~------ 217 (256)
T cd05114 156 ------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV---VEM---ISRG------ 217 (256)
T ss_pred ------eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH---HHH---HHCC------
Confidence 11122345668999999999899999999999999999999 8889876443211 000 1000
Q ss_pred hhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 598 LRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 598 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
.+...+...+..+.+++.+||+.||.+||++.|+++.|+
T Consensus 218 --------~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 218 --------FRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred --------CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 001112233457899999999999999999999998873
No 51
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.6e-36 Score=314.48 Aligned_cols=257 Identities=26% Similarity=0.441 Sum_probs=203.7
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE-------CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF-------KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~-------~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
|.+.+ .+|.|+| |.||++.. ++..+|+|.++. ++.+|++++++++|+||+++++++..
T Consensus 7 ~~~~~-~lg~G~~-------~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (288)
T cd05093 7 IVLKR-ELGEGAF-------GKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE 78 (288)
T ss_pred eeecc-ccCCcCC-------eeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 44444 3899999 99999975 134588998753 46789999999999999999999999
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCC--------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRY--------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~ 497 (669)
.+..++||||+++|+|.+++..... .....+++.+++.++.|++.||+|||+++ ++||||||+|||+++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~ 155 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGE 155 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEcc
Confidence 9999999999999999999975421 12235999999999999999999999999 999999999999999
Q ss_pred CCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchh
Q 005923 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNC 576 (669)
Q Consensus 498 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~ 576 (669)
++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 156 ~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~ 229 (288)
T cd05093 156 NLLVKIGDFGMSRDVYSTDYY------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN 229 (288)
T ss_pred CCcEEeccCCccccccCCcee------ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999866432211 11123345778999999999999999999999999999998 88888754421
Q ss_pred HHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCCCC
Q 005923 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSSDW 653 (669)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 653 (669)
+ . .. .... ... ...+..++..+.+++.+||+.||.+|||+.|+++.|+++...+..|
T Consensus 230 ~--~-~~---~i~~---------~~~-----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~~~~ 286 (288)
T cd05093 230 E--V-IE---CITQ---------GRV-----LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKASPVY 286 (288)
T ss_pred H--H-HH---HHHc---------CCc-----CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhcccc
Confidence 1 0 00 0000 000 1112234457899999999999999999999999999999876655
No 52
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.4e-36 Score=309.18 Aligned_cols=241 Identities=29% Similarity=0.503 Sum_probs=194.3
Q ss_pred HHHhCCCCcccceeeEEEEEEE----CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF----KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~----~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
++|.|+| |.||+|.+ .+..+|+|+++. ++..|+.++++++|+||+++++++. ++..++|
T Consensus 2 ~lg~G~~-------g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv 73 (257)
T cd05116 2 ELGSGNF-------GTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLV 73 (257)
T ss_pred cCCCcCC-------cceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEE
Confidence 4789999 99999976 367799998853 3677999999999999999999985 5577999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+++ ++||||||+||++++++.+||+|||+++..
T Consensus 74 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~ 145 (257)
T cd05116 74 MELAELGPLNKFLQKN-----KHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 145 (257)
T ss_pred EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCcccccc
Confidence 9999999999999754 35899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
....... .......++..|+|||.+....++.++|+||||+++|||++ |+.||......+ ....
T Consensus 146 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~------- 210 (257)
T cd05116 146 GADENYY-----KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE---VTQM------- 210 (257)
T ss_pred CCCCCee-----eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH-------
Confidence 5432110 11112234578999999988889999999999999999998 999987543321 0000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
++ .....+.|..++.++.+++.+||+.||.+||++++|.+.|++.+
T Consensus 211 ------i~----~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05116 211 ------IE----SGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNYY 256 (257)
T ss_pred ------HH----CCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhccc
Confidence 11 11122334456678899999999999999999999999998653
No 53
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.7e-36 Score=309.04 Aligned_cols=242 Identities=26% Similarity=0.475 Sum_probs=194.2
Q ss_pred HHHhCCCCcccceeeEEEEEEEC----CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK----GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~----g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
++|.|+| |.||+|.+. +..+|+|.++. ++.+|+.++++++|+||+++++++. ....++||
T Consensus 2 ~ig~G~~-------g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~ 73 (257)
T cd05115 2 ELGSGNF-------GCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVM 73 (257)
T ss_pred ccCCCCc-------ccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEE
Confidence 4799999 999999873 34689998853 3668999999999999999999985 55789999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ...+++..+++++.|++.||+|||+++ ++||||||+|||++.++.+||+|||+++...
T Consensus 74 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 146 (257)
T cd05115 74 EMASGGPLNKFLSGK----KDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALG 146 (257)
T ss_pred EeCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCcccccc
Confidence 999999999999753 246899999999999999999999998 9999999999999999999999999998654
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEES 592 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (669)
...... .......++..|+|||.+.+..++.++||||||+++|||++ |..||......+. ...+
T Consensus 147 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-------~~~~--- 211 (257)
T cd05115 147 ADDSYY-----KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV-------MSFI--- 211 (257)
T ss_pred CCccce-----eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH-------HHHH---
Confidence 332110 01111233568999999998899999999999999999996 9999876443211 0000
Q ss_pred hHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 593 NVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 593 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
....+...+..++.++.+++.+||..||++||++.+|.+.|+.++
T Consensus 212 ----------~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 212 ----------EQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred ----------HCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 111122344455678899999999999999999999999998764
No 54
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3e-36 Score=314.23 Aligned_cols=248 Identities=27% Similarity=0.493 Sum_probs=198.6
Q ss_pred HHHhCCCCcccceeeEEEEEEECC-------CeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKG-------DDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g-------~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
.+|.|.| |.||+|.... ..+++|.++. ++.+|+.++++++||||+++++.|..++..+
T Consensus 7 ~lg~g~~-------g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 7 TLGEGEF-------GKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred cccCcCC-------cceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 4899999 9999998632 4588888752 3667999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCC-------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCC
Q 005923 431 LVYEFADNGALSDWLHSNRY-------------------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~ 491 (669)
+|+||+.+|+|.+++...+. .....+++..++.++.|++.||+|||+.+ ++||||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhh
Confidence 99999999999999875321 11235899999999999999999999998 999999999
Q ss_pred CeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCC
Q 005923 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAV 570 (669)
Q Consensus 492 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~ 570 (669)
|||+++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 230 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSY------VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 230 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccch------hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999865432211 01112345678999999999999999999999999999998 99888
Q ss_pred CCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcC
Q 005923 571 TGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSS 649 (669)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 649 (669)
.+....+ +.. . + ....+...+...+..+.+++.+||+.||.+||++.|+++.|+++...
T Consensus 231 ~~~~~~~---~~~----~---------~----~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 231 PGIAPER---LFN----L---------L----KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred CCCCHHH---HHH----H---------H----hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 7644211 111 0 1 11112223344556789999999999999999999999999998764
No 55
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=7.2e-37 Score=324.26 Aligned_cols=232 Identities=25% Similarity=0.380 Sum_probs=193.0
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|.| |.||++.. +|+.+|+|+++. .+.+|++++++++||||+++++++..++..++|||
T Consensus 3 lG~G~~-------g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 75 (323)
T cd05571 3 LGKGTF-------GKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVME 75 (323)
T ss_pred eeeCCC-------eEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEe
Confidence 789999 99999987 478899999863 24568999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++|+|.+++... +.+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 76 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 147 (323)
T cd05571 76 YANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred CCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCccccc
Confidence 99999999999754 46899999999999999999999999 99999999999999999999999999975432
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. .......||..|+|||.+.+..++.++|||||||++|||++|+.||.+..... .... ...
T Consensus 148 ~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---~~~~---~~~---- 209 (323)
T cd05571 148 DG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFEL---ILM---- 209 (323)
T ss_pred CC--------CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH---HHHH---HHc----
Confidence 21 11234579999999999999999999999999999999999999997644211 1000 000
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 642 (669)
. ...+|......+.+++.+||+.||.+|| ++.|++++
T Consensus 210 ---------~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 210 ---------E--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred ---------C--CCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 0 1123444566789999999999999999 79998754
No 56
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.8e-36 Score=329.44 Aligned_cols=254 Identities=27% Similarity=0.444 Sum_probs=200.7
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC-------CCeeEEEEecc--------cHHHHHHHHHhcC-CCCceeEeeE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------GDDAAVKVMKG--------DVSSEINILKKIN-HSNIIRLSGF 422 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-------g~~vavK~~~~--------~~~~E~~~l~~l~-H~niv~l~g~ 422 (669)
.|.+.+ .+|.|+| |.||+|... +..||||+++. .+.+|+++|++++ ||||++++++
T Consensus 38 ~~~~~~-~LG~G~f-------G~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~ 109 (400)
T cd05105 38 GLVLGR-ILGSGAF-------GKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGA 109 (400)
T ss_pred ceehhh-eecCCCC-------ceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEE
Confidence 344555 3899999 999999863 23599999853 3668999999996 9999999999
Q ss_pred EEecCceeEEEEecCCCCHHHHHhcCCCC---------------------------------------------------
Q 005923 423 CVHEGNTYLVYEFADNGALSDWLHSNRYQ--------------------------------------------------- 451 (669)
Q Consensus 423 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 451 (669)
|.+++..+|||||+++|+|.++|+..+..
T Consensus 110 ~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 110 CTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred EccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 99999999999999999999999754210
Q ss_pred ----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCC
Q 005923 452 ----------------------------------------TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491 (669)
Q Consensus 452 ----------------------------------------~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~ 491 (669)
....+++..+++++.|++.||+|||+.+ ++||||||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~ 266 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAAR 266 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChH
Confidence 1135889999999999999999999998 999999999
Q ss_pred CeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCC
Q 005923 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAV 570 (669)
Q Consensus 492 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~ 570 (669)
|||+++++.+||+|||+++....... ........++..|+|||.+.+..++.++||||||+++|||++ |..||
T Consensus 267 Nill~~~~~~kL~DfGla~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~ 340 (400)
T cd05105 267 NVLLAQGKIVKICDFGLARDIMHDSN------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPY 340 (400)
T ss_pred hEEEeCCCEEEEEeCCcceecccccc------ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 99999999999999999986543221 111223456788999999999999999999999999999997 88888
Q ss_pred CCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhc
Q 005923 571 TGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWS 648 (669)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 648 (669)
........ ... .+.. ..+...+..++..+.+++.+||+.||.+||++.+|.+.|+++..
T Consensus 341 ~~~~~~~~--~~~-------------~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 341 PGMIVDST--FYN-------------KIKS----GYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred cccchhHH--HHH-------------HHhc----CCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 75332110 000 0000 11122334556778999999999999999999999999998753
No 57
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.4e-36 Score=310.68 Aligned_cols=246 Identities=32% Similarity=0.533 Sum_probs=199.2
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC-----CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK-----GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-----g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
|++.+ .+|.|+| |.||+|.+. ...+|+|.++. ++.+|+.++++++||||+++++++..+
T Consensus 6 ~~~~~-~lg~g~~-------g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 77 (266)
T cd05033 6 VTIEK-VIGGGEF-------GEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS 77 (266)
T ss_pred ceeee-EecCCcc-------ceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC
Confidence 45444 3899999 999999984 24689998753 366799999999999999999999999
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
+..++||||+++|+|.+++.... ..+++..+++++.|++.||+|||+.+ ++||||||+|||+++++.+||+||
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~df 150 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLREND----GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDF 150 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECcc
Confidence 99999999999999999997642 36899999999999999999999998 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 585 (669)
|+++....... ........++..|+|||.+.+..++.++||||||+++|||++ |..||......+ ....
T Consensus 151 g~~~~~~~~~~------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~---~~~~- 220 (266)
T cd05033 151 GLSRRLEDSEA------TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD---VIKA- 220 (266)
T ss_pred chhhccccccc------ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH---HHHH-
Confidence 99998752211 111222345678999999999999999999999999999998 988886543211 0000
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
+.. ....+.+.+++..+.+++.+||+.+|.+||++.||++.|+++
T Consensus 221 ------------~~~----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 221 ------------VED----GYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------------HHc----CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000 011122344566789999999999999999999999999876
No 58
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.2e-36 Score=313.96 Aligned_cols=249 Identities=25% Similarity=0.461 Sum_probs=198.1
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE------CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF------KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~------~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
|++.+ ++|.|+| |.||+|.+ .+..+++|.++. ++.+|++++++++||||+++++++..
T Consensus 7 ~~~~~-~lg~g~~-------g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 78 (283)
T cd05090 7 VRFME-ELGECAF-------GKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ 78 (283)
T ss_pred ceeee-eccccCC-------cceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec
Confidence 44444 4899999 99999985 346789999863 47789999999999999999999999
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCe
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRY------------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NI 493 (669)
+...++||||+++|+|.+++..... .....+++.+++.++.|++.||+|||+++ ++||||||+||
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~ni 155 (283)
T cd05090 79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNI 155 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceE
Confidence 9999999999999999999964321 01235899999999999999999999999 99999999999
Q ss_pred eecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCC
Q 005923 494 LLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTG 572 (669)
Q Consensus 494 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~ 572 (669)
|+++++.+||+|||+++....... ........++..|+|||.+.+..++.++||||||+++|||++ |..||.+
T Consensus 156 li~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~ 229 (283)
T cd05090 156 LIGEQLHVKISDLGLSREIYSADY------YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYG 229 (283)
T ss_pred EEcCCCcEEeccccccccccCCcc------eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999987643321 111233445778999999998999999999999999999998 8888876
Q ss_pred CchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005923 573 DQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645 (669)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 645 (669)
....+. ..... .......+..++..+.+++.+||+.||.+||++.+|.+.|..
T Consensus 230 ~~~~~~-------~~~~~-------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 230 FSNQEV-------IEMVR-------------KRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CCHHHH-------HHHHH-------------cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 432110 00000 011112334455678999999999999999999999998863
No 59
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=4.8e-36 Score=308.31 Aligned_cols=252 Identities=25% Similarity=0.393 Sum_probs=203.6
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
.|++.+ .++.|.| |.||++.. ++..++||.++. ++.+|+.++++++|+||+++++++..+
T Consensus 3 ~y~~~~-~ig~g~~-------g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~ 74 (267)
T cd08229 3 NFRIEK-KIGRGQF-------SEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED 74 (267)
T ss_pred hhhhhh-hhcccCC-------eEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC
Confidence 455555 4999999 99999996 588999997642 466799999999999999999999999
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
+..+++|||+++++|.+++.... .....+++.+++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+||
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df 150 (267)
T cd08229 75 NELNIVLELADAGDLSRMIKHFK-KQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred CeEEEEEEecCCCCHHHHHHHhh-ccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcc
Confidence 99999999999999999987532 22356899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
|+++....... ......++..|+|||++.+..++.++|+||||+++|||++|..||.+........ .
T Consensus 151 g~~~~~~~~~~--------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~- 217 (267)
T cd08229 151 GLGRFFSSKTT--------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL----C- 217 (267)
T ss_pred hhhhccccCCc--------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHH----h-
Confidence 99886643221 1123467889999999999999999999999999999999999997543211000 0
Q ss_pred HHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 587 RVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 587 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
..+.....+ ...+......+.+++.+||+.||.+||||.+|++.+++++
T Consensus 218 ---------~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 218 ---------KKIEQCDYP---PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ---------hhhhcCCCC---CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 011111111 1112345667999999999999999999999999999875
No 60
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.9e-36 Score=308.95 Aligned_cols=246 Identities=26% Similarity=0.489 Sum_probs=198.3
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC-CCeeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
|++.+ ++|.|+| |.||+|..+ +..+|+|.++. .+.+|+.++++++|+||+++++++..++..+++
T Consensus 8 ~~~~~-~lg~g~~-------g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 8 IKLVK-KLGAGQF-------GEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred eEEee-ecCCcCC-------ceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEE
Confidence 44444 4899999 999999874 56789998753 466799999999999999999999988999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++|+|.++++.. ....+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++..
T Consensus 80 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~ 153 (261)
T cd05072 80 TEYMAKGSLLDFLKSD---EGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVI 153 (261)
T ss_pred EecCCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceec
Confidence 9999999999999764 2346899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... .......++..|+|||++.++.++.++||||||+++|||++ |+.||.+....+. ...
T Consensus 154 ~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~---~~~------- 216 (261)
T cd05072 154 EDNEY-------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDV---MSA------- 216 (261)
T ss_pred CCCce-------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHH---HHH-------
Confidence 43221 11122345678999999999999999999999999999998 8999876443211 000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
+... .+.+....++..+.+++.+||+.+|.+||+++++.+.|+++
T Consensus 217 ------~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 217 ------LQRG----YRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ------HHcC----CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 0000 01112223455789999999999999999999999999864
No 61
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.9e-36 Score=312.13 Aligned_cols=250 Identities=28% Similarity=0.469 Sum_probs=200.5
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC-------CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFC 423 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-------g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~ 423 (669)
.|.+.+ .+|+|+| |.||+|... +..+|+|.++. ++.+|++++++++|+||+++++++
T Consensus 6 ~~~~~~-~lg~g~~-------~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 77 (280)
T cd05049 6 TIVLKR-ELGEGAF-------GKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVC 77 (280)
T ss_pred HhhHHh-hccccCC-------ceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEE
Confidence 455655 4999999 999999863 35799999853 467899999999999999999999
Q ss_pred EecCceeEEEEecCCCCHHHHHhcCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCee
Q 005923 424 VHEGNTYLVYEFADNGALSDWLHSNRY---------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494 (669)
Q Consensus 424 ~~~~~~~lV~e~~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NIL 494 (669)
..+...++||||+++|+|.++++.... .....+++.++..++.|++.|+.|||+++ ++||||||+||+
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nil 154 (280)
T cd05049 78 TEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCL 154 (280)
T ss_pred ecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEE
Confidence 999999999999999999999976421 12346899999999999999999999999 999999999999
Q ss_pred ecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCC
Q 005923 495 LDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGD 573 (669)
Q Consensus 495 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~ 573 (669)
++.++.+||+|||+++....... ........++..|+|||.+.++.++.++||||||+++|||++ |..||.+.
T Consensus 155 i~~~~~~kl~d~g~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~ 228 (280)
T cd05049 155 VGYDLVVKIGDFGMSRDVYTTDY------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGL 228 (280)
T ss_pred EcCCCeEEECCcccceecccCcc------eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999986533221 011123345778999999999999999999999999999998 99998765
Q ss_pred chhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005923 574 QNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645 (669)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 645 (669)
...+. ...+ . .......+...+..+.+++.+||+.||.+||++.||++.|++
T Consensus 229 ~~~~~---~~~~-------------~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 229 SNEEV---IECI-------------T----QGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred CHHHH---HHHH-------------H----cCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 43211 0100 0 001112233455678999999999999999999999999863
No 62
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.1e-37 Score=322.26 Aligned_cols=231 Identities=25% Similarity=0.352 Sum_probs=189.9
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|+| |.||++... +..+|+|.++. .+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 lg~G~~-------g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 73 (312)
T cd05585 1 IGKGSF-------GKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLA 73 (312)
T ss_pred CCcCCC-------eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEc
Confidence 478999 999999984 67899998853 24579999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 74 ~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~ 145 (312)
T cd05585 74 FINGGELFHHLQRE-----GRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMK 145 (312)
T ss_pred CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCcc
Confidence 99999999999754 35899999999999999999999999 99999999999999999999999999986432
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. .......||..|+|||.+.+..++.++|||||||++|||++|+.||.+....+ .......
T Consensus 146 ~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~------~~~~~~~---- 207 (312)
T cd05585 146 DD--------DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE------MYRKILQ---- 207 (312)
T ss_pred CC--------CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH------HHHHHHc----
Confidence 21 11234578999999999999999999999999999999999999998654211 0111110
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC---HHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS---ISEVFV 641 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt---~~evl~ 641 (669)
. ....+......+.+++.+||+.||.+||+ +.|++.
T Consensus 208 ---------~--~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 208 ---------E--PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred ---------C--CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 1 11233445567899999999999999986 455554
No 63
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.2e-36 Score=308.70 Aligned_cols=252 Identities=23% Similarity=0.364 Sum_probs=202.0
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
.|++.+ .++.|.| |.||+|.. ++..+|||.++. ++.+|++++++++||||+++++++...
T Consensus 3 ~~~i~~-~l~~g~~-------~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 74 (267)
T cd08228 3 NFQIEK-KIGRGQF-------SEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED 74 (267)
T ss_pred ceeeee-eeccCCC-------eeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC
Confidence 355555 3899999 99999987 578999997642 367799999999999999999999999
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
+..++|+||+++|+|.+++...+ .....+++..+..++.|++.||+|||+++ ++|+||||+||+++.++.++|+||
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~ 150 (267)
T cd08228 75 NELNIVLELADAGDLSQMIKYFK-KQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred CeEEEEEEecCCCcHHHHHHHhh-hccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECcc
Confidence 99999999999999999986432 12345899999999999999999999998 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
|++........ ......++..|+|||.+.+..++.++|+||||+++|||++|+.|+.......... .
T Consensus 151 g~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~----~- 217 (267)
T cd08228 151 GLGRFFSSKTT--------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSL----C- 217 (267)
T ss_pred ccceeccchhH--------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHH----H-
Confidence 99987643221 1123467889999999999899999999999999999999999987543211100 0
Q ss_pred HHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 587 RVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 587 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
..+.... .....+...+..+.+++.+||+.+|.+||++.||++.|+++.
T Consensus 218 ---------~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 218 ---------QKIEQCD---YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ---------HHHhcCC---CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0111111 111122345567899999999999999999999999999874
No 64
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-37 Score=314.39 Aligned_cols=252 Identities=27% Similarity=0.407 Sum_probs=200.0
Q ss_pred cccccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------------------cHHHHHHHHHhcC
Q 005923 356 SLTLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------------------DVSSEINILKKIN 412 (669)
Q Consensus 356 ~~~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------------------~~~~E~~~l~~l~ 412 (669)
.+..|++.. ++|.|.| |.|-+|.. .++.||||++.. .+.+|+.+|++++
T Consensus 95 ~lNqy~l~~-eiG~G~y-------GkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~ 166 (576)
T KOG0585|consen 95 QLNQYELIK-EIGSGQY-------GKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH 166 (576)
T ss_pred ehhheehhh-hhcCCcc-------ceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC
Confidence 345566655 6999999 99999987 578899999831 3668999999999
Q ss_pred CCCceeEeeEEEe--cCceeEEEEecCCCCHHHHHhcCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCC
Q 005923 413 HSNIIRLSGFCVH--EGNTYLVYEFADNGALSDWLHSNRYQTSDN-LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLK 489 (669)
Q Consensus 413 H~niv~l~g~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~-l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik 489 (669)
|||||+|+.+..+ .+..|||+||+..|.+...= ..+. |++.+.+++++++..||+|||.++ |||||||
T Consensus 167 H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p------~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIK 237 (576)
T KOG0585|consen 167 HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP------PDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIK 237 (576)
T ss_pred CcCeeEEEEeecCcccCceEEEEEeccCCccccCC------CCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccc
Confidence 9999999999864 35789999999998875432 2233 999999999999999999999999 9999999
Q ss_pred CCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCC----CCchhhHHHHHHHHHHHHc
Q 005923 490 TSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV----ITPKLDVFAFGVVVLELLS 565 (669)
Q Consensus 490 ~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~s~~sDV~S~Gvvl~ellt 565 (669)
|+|+||++++++||+|||.+......... +...++.+ .+||+.|+|||...++. .+.+.||||+||+||.|+.
T Consensus 238 PsNLLl~~~g~VKIsDFGVs~~~~~~~~~--~~d~~L~~-tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllf 314 (576)
T KOG0585|consen 238 PSNLLLSSDGTVKISDFGVSNEFPQGSDE--GSDDQLSR-TVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLF 314 (576)
T ss_pred hhheEEcCCCcEEeeccceeeecccCCcc--ccHHHHhh-cCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhh
Confidence 99999999999999999999876443211 12223333 78999999999997743 3568999999999999999
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005923 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645 (669)
Q Consensus 566 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 645 (669)
|+.||.++... +..++++...+.-+...++...+.+|++++|.+||.+|.+..+|..+..-
T Consensus 315 G~~PF~~~~~~-------------------~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 315 GQLPFFDDFEL-------------------ELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred ccCCcccchHH-------------------HHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 99999875421 12233344444333233567789999999999999999999999987653
Q ss_pred h
Q 005923 646 I 646 (669)
Q Consensus 646 i 646 (669)
.
T Consensus 376 t 376 (576)
T KOG0585|consen 376 T 376 (576)
T ss_pred c
Confidence 3
No 65
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.1e-36 Score=307.13 Aligned_cols=239 Identities=27% Similarity=0.454 Sum_probs=193.0
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
++|.|.| |.||+|.. +++.+|+|..+. .+.+|++++++++||||++++++|..++..++||||
T Consensus 2 ~lg~g~~-------g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 74 (252)
T cd05084 2 RIGRGNF-------GEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 74 (252)
T ss_pred ccCcccC-------ccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEee
Confidence 3789999 99999988 578899998643 367899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+++++|.++++.. ...+++..++.++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~~~L~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 75 VQGGDFLTFLRTE----GPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDG 147 (252)
T ss_pred ccCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccc
Confidence 9999999999753 245899999999999999999999998 999999999999999999999999999865432
Q ss_pred ccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
... ........+..|+|||.+.++.++.++||||||+++|||++ |..|+........ .
T Consensus 148 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~-------~-------- 206 (252)
T cd05084 148 VYA------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT-------R-------- 206 (252)
T ss_pred ccc------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH-------H--------
Confidence 110 00111223567999999999999999999999999999998 8777764332110 0
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
..+. .......+...+..+.+++.+||+.||.+|||+.|+++.|+
T Consensus 207 -~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 207 -EAIE----QGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred -HHHH----cCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 0011 11122334445667899999999999999999999999886
No 66
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.3e-36 Score=314.55 Aligned_cols=237 Identities=23% Similarity=0.334 Sum_probs=193.4
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|+| |.||++.. +|+.+|+|.++. .+.+|++++++++|+||+++++++.+++..++|||
T Consensus 8 lg~G~~-------g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 8 LGKGGF-------GEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred EecCCC-------EEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 899999 99999987 488999998742 24579999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++....
T Consensus 81 ~~~~g~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 81 IMNGGDLKFHIYNMG---NPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPE 154 (285)
T ss_pred ecCCCcHHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence 999999999886532 235899999999999999999999999 99999999999999999999999999987543
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. ......||..|+|||++.+..++.++|||||||++|||++|+.||.+....... ..+..
T Consensus 155 ~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~---~~~~~------- 215 (285)
T cd05631 155 GE---------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR---EEVDR------- 215 (285)
T ss_pred CC---------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH---HHHHH-------
Confidence 21 123357899999999999999999999999999999999999999865432110 00000
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS-----ISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~~ 642 (669)
.+. + ....++......+.+|+++||+.||.+||+ ++|+++.
T Consensus 216 --~~~---~--~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 216 --RVK---E--DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred --Hhh---c--ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 000 0 112234445567899999999999999997 7787764
No 67
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.9e-36 Score=309.11 Aligned_cols=246 Identities=28% Similarity=0.485 Sum_probs=198.7
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC-CCeeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
|++.+ .+|.|+| |.||+|..+ +..+|+|.++. ++.+|+.++++++|+||+++++++..++..++|
T Consensus 8 ~~~~~-~lg~g~~-------~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05068 8 IQLLR-KLGAGQF-------GEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIV 79 (261)
T ss_pred eeeEE-EecccCC-------ccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeee
Confidence 44443 4899999 999999984 56799999863 477899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++++|.+++.... ...++|..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++..
T Consensus 80 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 153 (261)
T cd05068 80 TELMKYGSLLEYLQGGA---GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVI 153 (261)
T ss_pred eecccCCcHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEc
Confidence 99999999999997642 346899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
...... .......+..|+|||++.+..++.++||||||+++|||++ |+.||.+..... ....
T Consensus 154 ~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~------- 216 (261)
T cd05068 154 KEDIYE-------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE---VLQQ------- 216 (261)
T ss_pred cCCccc-------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHH-------
Confidence 532110 0111223467999999999999999999999999999999 888887644211 0000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
+ +.......+...+..+.+++.+||+.+|.+||++.++.+.|+.+
T Consensus 217 ------~----~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 217 ------V----DQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ------H----HcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0 01111223334556789999999999999999999999999853
No 68
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=301.08 Aligned_cols=251 Identities=25% Similarity=0.342 Sum_probs=200.0
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc---------HHHHHHHHHhcCCCCceeEeeEEEec--CceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD---------VSSEINILKKINHSNIIRLSGFCVHE--GNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~---------~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV 432 (669)
+|++|.| |.||+|+.+ ++.||+|+++.+ ..+|+.+|.+++|||||.+-.+.... +..|||
T Consensus 83 rI~EGty-------GiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 83 RIEEGTY-------GVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred hcccCcc-------eeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 4899999 999999984 678999999753 46899999999999999998887643 568999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++ +|...+.+.+ .++...++.-+..|+++|++|||... |+|||||++|+|++..|.+||+|||+||..
T Consensus 156 Me~~Eh-DLksl~d~m~----q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK----QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred HHHHHh-hHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhh
Confidence 999997 9999998763 57899999999999999999999999 999999999999999999999999999988
Q ss_pred CCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
.... ...+..+-|.+|+|||.+.+ ..|+...|+||+|||+.||++++..|.|.... .....+...+..
T Consensus 228 gsp~--------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~---dQl~~If~llGt 296 (419)
T KOG0663|consen 228 GSPL--------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI---DQLDKIFKLLGT 296 (419)
T ss_pred cCCc--------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH---HHHHHHHHHhCC
Confidence 7642 22345678999999999987 56899999999999999999999999876532 222344444433
Q ss_pred hhHHh-----hhh--------cccCCccCCCCcHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 592 SNVRE-----KLR--------GFIDPSLRNEYPLD-LAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 592 ~~~~~-----~l~--------~~~d~~l~~~~~~~-~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+.... .+. ...-..++..++.. +...-++|+...+..||.+|.|++|.+++
T Consensus 297 Pte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 297 PSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred CccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 22110 000 00001122223322 45667899999999999999999999875
No 69
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.6e-36 Score=306.84 Aligned_cols=242 Identities=24% Similarity=0.461 Sum_probs=195.4
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC-CCeeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
|.+.+ .+|.|.| |.||++.++ +..+|+|.++. ++.+|++++++++|+||+++++++...+..++|
T Consensus 6 ~~~~~-~lg~G~~-------~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 6 LTFLK-ELGSGQF-------GVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred cchhh-hhccCCC-------ceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 45555 3899999 999999885 44789998753 467899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++++|.++++... ..++|..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++..
T Consensus 78 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~ 150 (256)
T cd05059 78 TEYMANGCLLNYLRERK----GKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYV 150 (256)
T ss_pred EecCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceec
Confidence 99999999999997542 36899999999999999999999999 999999999999999999999999999865
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+. ..
T Consensus 151 ~~~~~-------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~~-------- 212 (256)
T cd05059 151 LDDQY-------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV---VE-------- 212 (256)
T ss_pred ccccc-------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH---HH--------
Confidence 43211 01111233457999999999999999999999999999999 7888875433211 00
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
.+.. ..+...+...+.++.+++.+||..+|.+|||+.|+++.|
T Consensus 213 -----~~~~----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 213 -----SVSA----GYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -----HHHc----CCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0111 111222334566799999999999999999999999886
No 70
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=7.3e-37 Score=325.08 Aligned_cols=237 Identities=25% Similarity=0.383 Sum_probs=195.5
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
..|.+.+ .+|+|+| |.||++... ++.+|+|.++. .+.+|+.++++++||||+++++++.+
T Consensus 18 ~~y~~~~-~lg~G~~-------g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 89 (329)
T PTZ00263 18 SDFEMGE-TLGTGSF-------GRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD 89 (329)
T ss_pred hheEEEE-EEEecCC-------eEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc
Confidence 3455555 3899999 999999984 77899999853 35679999999999999999999999
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcc
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 505 (669)
++..++||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|
T Consensus 90 ~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~D 161 (329)
T PTZ00263 90 ENRVYFLLEFVVGGELFTHLRKA-----GRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTD 161 (329)
T ss_pred CCEEEEEEcCCCCChHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEee
Confidence 99999999999999999999754 35889999999999999999999999 99999999999999999999999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 585 (669)
||+++...... ....||..|+|||.+.+..++.++|||||||++|||++|+.||.+....+. .
T Consensus 162 fg~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------~ 224 (329)
T PTZ00263 162 FGFAKKVPDRT-----------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI------Y 224 (329)
T ss_pred ccCceEcCCCc-----------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH------H
Confidence 99998654321 234689999999999999999999999999999999999999986543211 0
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS-----ISEVFVT 642 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~~ 642 (669)
..+. ... ...|......+.+|+.+||+.||.+||+ ++|++.+
T Consensus 225 ~~i~-------------~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 225 EKIL-------------AGR--LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHHh-------------cCC--cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1111 111 1223334456889999999999999997 6777754
No 71
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.2e-36 Score=317.59 Aligned_cols=230 Identities=29% Similarity=0.416 Sum_probs=192.4
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.+|.|+| |.||++... ++.+|+|.++. .+.+|+.++++++||||+++++++.+++..++||
T Consensus 8 ~lg~G~~-------g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 8 TVGTGTF-------GRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred eeecCCC-------eEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 3899999 999999985 78899999842 2567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... +.+++..+..++.|++.||+|||+++ ++||||||+|||+++++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~ 152 (291)
T cd05612 81 EYVPGGELFSYLRNS-----GRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLR 152 (291)
T ss_pred eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence 999999999999754 35899999999999999999999999 9999999999999999999999999998654
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... ....|+..|+|||.+.+..++.++|||||||++|||++|+.||.+....+. .. .+..
T Consensus 153 ~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~---~~---~i~~--- 212 (291)
T cd05612 153 DRT-----------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI---YE---KILA--- 212 (291)
T ss_pred CCc-----------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HH---HHHh---
Confidence 321 224689999999999999999999999999999999999999986543211 11 1110
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS-----ISEVFVT 642 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~~ 642 (669)
. ...++......+.+++++||+.||.+||+ ++|++++
T Consensus 213 ----------~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 213 ----------G--KLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ----------C--CcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 0 01223334567899999999999999995 8887765
No 72
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.8e-36 Score=317.92 Aligned_cols=250 Identities=21% Similarity=0.330 Sum_probs=194.1
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
++|.|+| |.||++... +..+|+|.++. .+.+|+++|++++||||+++++++..++..++||||
T Consensus 12 ~lg~G~~-------g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 12 ELGAGNG-------GVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred eecCCCC-------EEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 4899999 999999985 67889998753 367899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKY-TNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~-~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
+++|+|.+++... ..+++..+..++.|++.||.|||+. + |+||||||+|||+++++.+||+|||+++....
T Consensus 85 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 85 MDGGSLDQVLKEA-----KRIPEEILGKVSIAVLRGLAYLREKHQ---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred CCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 9999999999764 3589999999999999999999985 5 99999999999999999999999999986543
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhh-h
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEES-N 593 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~ 593 (669)
.. .....|+..|+|||.+.+..++.++|||||||++|||++|+.||......+.. ..+....... .
T Consensus 157 ~~----------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~ 223 (331)
T cd06649 157 SM----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELE---AIFGRPVVDGEE 223 (331)
T ss_pred cc----------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHhccccccccc
Confidence 21 22346899999999999999999999999999999999999999754432111 1110000000 0
Q ss_pred -----------------------------HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 594 -----------------------------VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 594 -----------------------------~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
..+..+.+...............++.+|+.+||+.||++|||++|++++-
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 224 GEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred CCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 00000000000000001113456789999999999999999999999863
No 73
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.2e-36 Score=320.54 Aligned_cols=232 Identities=25% Similarity=0.372 Sum_probs=192.0
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc----------HHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD----------VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~----------~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|+|+| |.||++.. +|..||+|.++.+ +.+|++++++++||||+++++++..++..++|||
T Consensus 3 lG~G~~-------g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E 75 (323)
T cd05595 3 LGKGTF-------GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME 75 (323)
T ss_pred eeeCCC-------EEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEe
Confidence 789999 99999987 4789999998642 3468999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++|+|.+++... ..+++..+..++.||+.||+|||+++ ++||||||+|||+++++.+||+|||+++....
T Consensus 76 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 147 (323)
T cd05595 76 YANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred CCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccC
Confidence 99999999998754 35899999999999999999999999 99999999999999999999999999875432
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. .......||..|+|||.+.+..++.++|||||||++|||++|+.||........ ... .
T Consensus 148 ~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~---~~~---~------ 207 (323)
T cd05595 148 DG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FEL---I------ 207 (323)
T ss_pred CC--------CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH---HHH---H------
Confidence 21 112235689999999999999999999999999999999999999976442110 000 0
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 642 (669)
.... ...|......+.+++.+||+.||.+|| ++.+++++
T Consensus 208 -------~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 208 -------LMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred -------hcCC--CCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 0001 123344566789999999999999998 88888753
No 74
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.2e-36 Score=313.26 Aligned_cols=253 Identities=21% Similarity=0.353 Sum_probs=191.0
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
+|.|.| |.||+++.+ ++.+|+|+++. .+.+|++++++++||||+++++++..++..++||||
T Consensus 9 lg~g~~-------~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 9 VGEGAY-------GVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred ecccCC-------EEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 799999 999999984 67899998853 356899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
++++.|..+... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 82 VEKNMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred CCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 998766655432 245899999999999999999999998 999999999999999999999999999876432
Q ss_pred ccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (669)
.. .......|+..|+|||++.+..++.++|||||||++|||++|+.||.+....+.......+...+......
T Consensus 154 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
T cd07848 154 SN-------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMK 226 (287)
T ss_pred cc-------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHH
Confidence 21 11223568899999999999999999999999999999999999998654322111111100000000000
Q ss_pred h-----hhhcccCCccC------CCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 596 E-----KLRGFIDPSLR------NEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 596 ~-----~l~~~~d~~l~------~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
. .......+... ..+....+..+.+|+.+||+.||.+|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 227 LFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 00000001000 0111124567899999999999999999999885
No 75
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.2e-36 Score=320.21 Aligned_cols=255 Identities=29% Similarity=0.456 Sum_probs=199.8
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC-------CCeeEEEEecc--------cHHHHHHHHHhc-CCCCceeEeeE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------GDDAAVKVMKG--------DVSSEINILKKI-NHSNIIRLSGF 422 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-------g~~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~g~ 422 (669)
.|++.+ .+|.|+| |.||+|... ++.||+|+++. .+.+|++++.++ +|+||++++++
T Consensus 8 ~~~i~~-~lG~G~f-------g~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 8 RLKLGK-PLGRGAF-------GKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred Hhhhhc-ccccCcC-------ceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeee
Confidence 466665 4899999 999999752 35799998753 245799999999 89999999998
Q ss_pred EEec-CceeEEEEecCCCCHHHHHhcCCCC--------------------------------------------------
Q 005923 423 CVHE-GNTYLVYEFADNGALSDWLHSNRYQ-------------------------------------------------- 451 (669)
Q Consensus 423 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~-------------------------------------------------- 451 (669)
|... ...+++|||+++|+|.+++......
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 8754 5678999999999999999653210
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccc
Q 005923 452 ------TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525 (669)
Q Consensus 452 ------~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 525 (669)
....++|..+.+++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....... ..
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~------~~ 230 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD------YV 230 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcc------hh
Confidence 0136899999999999999999999998 99999999999999999999999999987643221 11
Q ss_pred eeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCC
Q 005923 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDP 604 (669)
Q Consensus 526 ~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 604 (669)
......++..|+|||++.+..++.++|||||||++|||++ |..||.+....+. . ...+. .
T Consensus 231 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--~----~~~~~-------------~ 291 (337)
T cd05054 231 RKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--F----CRRLK-------------E 291 (337)
T ss_pred hccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--H----HHHHh-------------c
Confidence 1223456778999999999999999999999999999998 9999875332110 0 00111 0
Q ss_pred ccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcC
Q 005923 605 SLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSS 649 (669)
Q Consensus 605 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 649 (669)
..+...+.....++.+++.+||+.+|++||++.||+++|+++...
T Consensus 292 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 292 GTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred cCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111122333456789999999999999999999999999998763
No 76
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.6e-36 Score=310.83 Aligned_cols=249 Identities=24% Similarity=0.406 Sum_probs=198.1
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC-------CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK-------GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCV 424 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-------g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~ 424 (669)
|.+.+ ++|.|+| |.||+|... +..+|+|+++. .+..|+.++++++||||+++++++.
T Consensus 7 ~~~~~-~lg~G~~-------g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~ 78 (283)
T cd05091 7 VRFME-ELGEDRF-------GKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT 78 (283)
T ss_pred HHHHH-HhCCCCC-------CeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc
Confidence 44444 4899999 999999873 35799999863 3567999999999999999999999
Q ss_pred ecCceeEEEEecCCCCHHHHHhcCC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCe
Q 005923 425 HEGNTYLVYEFADNGALSDWLHSNR-----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493 (669)
Q Consensus 425 ~~~~~~lV~e~~~~gsL~~~l~~~~-----------~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NI 493 (669)
..+..++++||+++++|.+++.... ......+++..+.+++.|++.||+|||+.+ ++||||||+||
T Consensus 79 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Ni 155 (283)
T cd05091 79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNV 155 (283)
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhhe
Confidence 9999999999999999999986321 011235889999999999999999999999 99999999999
Q ss_pred eecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCC
Q 005923 494 LLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTG 572 (669)
Q Consensus 494 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~ 572 (669)
|+++++.+||+|||+++....... ........++..|+|||.+.++.++.++||||||+++|||++ |..|+.+
T Consensus 156 l~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~ 229 (283)
T cd05091 156 LVFDKLNVKISDLGLFREVYAADY------YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 229 (283)
T ss_pred EecCCCceEecccccccccccchh------eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999987643321 111233456778999999999999999999999999999998 7778765
Q ss_pred CchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005923 573 DQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645 (669)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 645 (669)
....+ . .. .+ .+. .....+.+++..+.+++.+||+.+|.+||+++||+..|+.
T Consensus 230 ~~~~~--~----~~----------~i---~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 230 YSNQD--V----IE----------MI---RNR-QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCHHH--H----HH----------HH---HcC-CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 43211 0 00 00 011 1123345667779999999999999999999999998863
No 77
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.7e-36 Score=306.13 Aligned_cols=246 Identities=28% Similarity=0.527 Sum_probs=201.5
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC-CCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
.|++.+ ++|.|+| |.||+|... +..+++|.++. ++..|++++++++|+||+++++++...+..+
T Consensus 7 ~y~~~~-~ig~g~~-------~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 78 (261)
T cd05148 7 EFTLER-KLGSGYF-------GEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVY 78 (261)
T ss_pred HHHHhh-hhccCCC-------ccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeE
Confidence 355555 4899999 999999985 57789998753 4678999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcc
Q 005923 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR 510 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~ 510 (669)
+||||+++|+|.++++.. ....+++.++..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++.
T Consensus 79 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~ 152 (261)
T cd05148 79 IITELMEKGSLLAFLRSP---EGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLAR 152 (261)
T ss_pred EEEeecccCCHHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchh
Confidence 999999999999999764 2356899999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHH
Q 005923 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVL 589 (669)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 589 (669)
....... ......++..|+|||.+.+..++.++||||||++++||++ |+.||.+....+. ...+
T Consensus 153 ~~~~~~~--------~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~---~~~~---- 217 (261)
T cd05148 153 LIKEDVY--------LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEV---YDQI---- 217 (261)
T ss_pred hcCCccc--------cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHH---HHHH----
Confidence 7643221 1112345678999999999999999999999999999998 8888875442111 0000
Q ss_pred hhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 590 EESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 590 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
. ...+...+..++..+.+++.+||+.||.+|||++++++.|+.+
T Consensus 218 ------------~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 218 ------------T-AGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ------------H-hCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0 1112233445567789999999999999999999999999864
No 78
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=7.4e-36 Score=324.59 Aligned_cols=247 Identities=28% Similarity=0.501 Sum_probs=198.2
Q ss_pred HHHhCCCCcccceeeEEEEEEECC-------CeeEEEEecc--------cHHHHHHHHHhcC-CCCceeEeeEEEecCce
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKG-------DDAAVKVMKG--------DVSSEINILKKIN-HSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g-------~~vavK~~~~--------~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~ 429 (669)
++|.|+| |.||+|.+.+ ..||+|+++. .+.+|+++|.++. ||||++++++|...+..
T Consensus 44 ~lG~G~f-------G~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 44 TLGSGAF-------GRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred hccCCCc-------eeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 5999999 9999998743 4799999863 3567999999997 99999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCC-----------------------------------------------------------
Q 005923 430 YLVYEFADNGALSDWLHSNRY----------------------------------------------------------- 450 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 450 (669)
++||||+++|+|.++++..+.
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 999999999999999976421
Q ss_pred ----------------------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeec
Q 005923 451 ----------------------------------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLD 496 (669)
Q Consensus 451 ----------------------------------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~ 496 (669)
.....++|..++.++.|++.||+|||+.+ ++||||||+|||++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl~ 273 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVLIC 273 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEEEe
Confidence 01134788999999999999999999988 99999999999999
Q ss_pred CCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCch
Q 005923 497 TNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQN 575 (669)
Q Consensus 497 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~ 575 (669)
+++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNY------ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred CCCEEEEEecCcceeccccccc------ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 9999999999999865332210 11122356788999999999999999999999999999998 8888865332
Q ss_pred hHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 576 CEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
.+ ..... +....+...+..++.++.+++.+||+.+|.+||+++||+..|+++.
T Consensus 348 ~~--~~~~~-----------------~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 348 NE--QFYNA-----------------IKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred hH--HHHHH-----------------HHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11 10000 1111122334445678999999999999999999999999999875
No 79
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.1e-35 Score=306.52 Aligned_cols=245 Identities=28% Similarity=0.479 Sum_probs=192.0
Q ss_pred HHHhCCCCcccceeeEEEEEEECCC----eeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec------
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKGD----DAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE------ 426 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g~----~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~------ 426 (669)
.+|.|+| |.||+|.++.. .+|+|.++. ++..|++++++++|+||++++++|...
T Consensus 6 ~ig~G~~-------g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 6 TLGEGEF-------GSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred ccCcccC-------ceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCC
Confidence 4899999 99999998532 589998742 366799999999999999999988542
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQ-TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 505 (669)
...+++|||+++|+|.+++...+.. ....+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~D 155 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVAD 155 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECC
Confidence 2468999999999999998543321 2345899999999999999999999998 99999999999999999999999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 584 (669)
||+++........ .......++..|++||.+.+..++.++||||||+++|||++ |+.||.+....+ ...
T Consensus 156 fg~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~- 225 (272)
T cd05075 156 FGLSKKIYNGDYY------RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE---IYD- 225 (272)
T ss_pred CCcccccCcccce------ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH-
Confidence 9999876443211 11122345678999999999999999999999999999999 788886543211 100
Q ss_pred HHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
.+.. ......+..++..+.+++.+||+.||.+|||+.|+++.|+++
T Consensus 226 ---~~~~-------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 226 ---YLRQ-------------GNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ---HHHc-------------CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0110 001112234556789999999999999999999999999875
No 80
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=7.2e-36 Score=305.32 Aligned_cols=242 Identities=28% Similarity=0.492 Sum_probs=196.6
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEECCCeeEEEEeccc-----HHHHHHHHHhcCCCCceeEeeEEEe-cCceeEEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGD-----VSSEINILKKINHSNIIRLSGFCVH-EGNTYLVY 433 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~~-----~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~ 433 (669)
|++.+ .+|.|+| |.||++...|..+++|.++.+ +.+|+.++++++|+|++++++++.. ++..++||
T Consensus 8 ~~~~~-~lg~g~~-------~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 8 LKLLQ-TIGKGEF-------GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred Ceeee-eecccCC-------CeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 44444 3899999 999999999999999998643 6689999999999999999998654 45689999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.++++... ...+++..+++++.|++.||+|||+++ ++||||||+||++++++.+||+|||+++...
T Consensus 80 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 153 (256)
T cd05082 80 EYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 153 (256)
T ss_pred ECCCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceecc
Confidence 9999999999997642 245899999999999999999999999 9999999999999999999999999988653
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEES 592 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (669)
... ....++..|+|||++.+..++.++||||||+++|||++ |+.|+......+ ....
T Consensus 154 ~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~---~~~~-------- 211 (256)
T cd05082 154 STQ-----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPR-------- 211 (256)
T ss_pred ccC-----------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH--------
Confidence 321 11234567999999999999999999999999999997 888887543211 0000
Q ss_pred hHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 593 NVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 593 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
+. .......+..++..+.+++.+||+.||.+|||+.++++.|+++
T Consensus 212 -----~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 212 -----VE----KGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -----Hh----cCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 00 0111223334566789999999999999999999999999764
No 81
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=5.9e-36 Score=306.30 Aligned_cols=243 Identities=26% Similarity=0.473 Sum_probs=194.7
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEECCC-eeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g~-~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
|++.+ ++|.|.| |.||+|.+++. .+|+|.++. ++.+|+.++++++||||+++++++...+..++|
T Consensus 6 ~~~~~-~lg~G~~-------~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 6 LTFLK-ELGTGQF-------GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred eEEee-EecCccc-------ceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEE
Confidence 34444 4899999 99999998654 599998764 367899999999999999999999988899999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+.+|+|.+++.... ..++|.+++.++.|++.||+|||+.+ ++|+||||+|||+++++.+||+|||+++..
T Consensus 78 ~e~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~ 150 (256)
T cd05113 78 TEYMSNGCLLNYLREHG----KRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYV 150 (256)
T ss_pred EEcCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceec
Confidence 99999999999997642 35899999999999999999999999 999999999999999999999999999865
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+. ... ...
T Consensus 151 ~~~~~-------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~---~~~---~~~- 216 (256)
T cd05113 151 LDDEY-------TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET---VEK---VSQ- 216 (256)
T ss_pred CCCce-------eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH---HHH---Hhc-
Confidence 43221 01112245678999999998899999999999999999998 9988875442110 000 000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
..+...+......+.+++.+||+.||.+||++.+++..|+
T Consensus 217 -------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 217 -------------GLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -------------CCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0011112233467899999999999999999999998763
No 82
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-36 Score=323.24 Aligned_cols=235 Identities=26% Similarity=0.427 Sum_probs=198.9
Q ss_pred cccccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHhcC-CCCceeEeeE
Q 005923 356 SLTLYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKKIN-HSNIIRLSGF 422 (669)
Q Consensus 356 ~~~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~l~-H~niv~l~g~ 422 (669)
.+..|.+..+ +|.|+| |+|+++.++ ++.+|||++|++ ...|..|+...+ ||.+++|+..
T Consensus 366 ~l~~F~~l~v-LGkGsF-------GkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~ 437 (694)
T KOG0694|consen 366 TLDDFRLLAV-LGRGSF-------GKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC 437 (694)
T ss_pred cccceEEEEE-eccCcC-------ceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc
Confidence 3445555554 899999 999999995 567899999763 345777777775 9999999999
Q ss_pred EEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEE
Q 005923 423 CVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAK 502 (669)
Q Consensus 423 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~k 502 (669)
|..++++|+||||+.||++..+.+. +.+++....-++.+|+.||.|||+++ |||||||.+|||||.+|.+|
T Consensus 438 fQT~~~l~fvmey~~Ggdm~~~~~~------~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~k 508 (694)
T KOG0694|consen 438 FQTKEHLFFVMEYVAGGDLMHHIHT------DVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVK 508 (694)
T ss_pred cccCCeEEEEEEecCCCcEEEEEec------ccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEE
Confidence 9999999999999999996555443 45999999999999999999999999 99999999999999999999
Q ss_pred EcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHH
Q 005923 503 ITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582 (669)
Q Consensus 503 l~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~ 582 (669)
|+|||+++..-.. ...+....||+.|||||++.++.|+..+|+|||||+|||||.|..||.+++..+ ++
T Consensus 509 iADFGlcKe~m~~--------g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee---~F 577 (694)
T KOG0694|consen 509 IADFGLCKEGMGQ--------GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE---VF 577 (694)
T ss_pred ecccccccccCCC--------CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH---HH
Confidence 9999999865422 235678999999999999999999999999999999999999999999876432 11
Q ss_pred HHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCH
Q 005923 583 ASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636 (669)
Q Consensus 583 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 636 (669)
+. ++.. ...||..++.+...+++++|.+||.+|.-+
T Consensus 578 ds----------------I~~d--~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 578 DS----------------IVND--EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HH----------------HhcC--CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 11 1111 246788899999999999999999999987
No 83
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=317.09 Aligned_cols=256 Identities=24% Similarity=0.367 Sum_probs=199.5
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.||.|+| |.||.++- .|+.+|+|+++. .+..|-++|...++|+||+|+..|.+.+.+||||
T Consensus 148 ~IgkGAf-------GeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiM 220 (550)
T KOG0605|consen 148 VIGKGAF-------GEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIM 220 (550)
T ss_pred eeccccc-------eeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEE
Confidence 3899999 99999986 488999999974 2567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||++||++..+|.+. +.|++.....++.+++.|++-||+.| ||||||||+|+|||..|++||+||||+..+.
T Consensus 221 EylPGGD~mTLL~~~-----~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 221 EYLPGGDMMTLLMRK-----DTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EecCCccHHHHHHhc-----CcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhh
Confidence 999999999999765 57999999999999999999999999 9999999999999999999999999996432
Q ss_pred CCcccc-----------------CCc----------------------ccceeeecccccccccccccccCCCCchhhHH
Q 005923 514 SDEHEQ-----------------GGY----------------------GLQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554 (669)
Q Consensus 514 ~~~~~~-----------------~~~----------------------~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~ 554 (669)
...... ... ........+||+.|||||++.+..|+..+|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 211000 000 01112345899999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC
Q 005923 555 AFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP 634 (669)
Q Consensus 555 S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP 634 (669)
|+||||||||.|-.||.++...+. +..+...- . .+..+....+..+..+||.+|+. ||++|.
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T---~rkI~nwr------~--------~l~fP~~~~~s~eA~DLI~rll~-d~~~RL 434 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQET---YRKIVNWR------E--------TLKFPEEVDLSDEAKDLITRLLC-DPENRL 434 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHh------h--------hccCCCcCcccHHHHHHHHHHhc-CHHHhc
Confidence 999999999999999998775432 12221111 0 11112223344678999999999 999998
Q ss_pred CHHHHHHHHHHhhcCCCCCC
Q 005923 635 SISEVFVTLSKIWSSSSDWD 654 (669)
Q Consensus 635 t~~evl~~L~~i~~~~~~~~ 654 (669)
-..-+-+.=+--+-...+||
T Consensus 435 G~~G~~EIK~HPfF~~v~W~ 454 (550)
T KOG0605|consen 435 GSKGAEEIKKHPFFKGVDWD 454 (550)
T ss_pred CcccHHHHhcCCccccCCcc
Confidence 63333222222344456665
No 84
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=7e-36 Score=310.25 Aligned_cols=258 Identities=28% Similarity=0.456 Sum_probs=194.7
Q ss_pred HHHhCCCCcccceeeEEEEEEE------CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEec--Ccee
Q 005923 366 KIATGSFSEENRIQGSVYRGSF------KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHE--GNTY 430 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~------~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 430 (669)
.+|.|+| |.||++.+ .+..+|+|.++. .+.+|++++++++||||+++++++... ...+
T Consensus 11 ~lg~g~~-------g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 11 QLGKGNF-------GSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred eccCCCC-------ceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 3899999 99999985 367899999853 467899999999999999999987543 4679
Q ss_pred EEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcc
Q 005923 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR 510 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~ 510 (669)
+||||+++|+|.+++.+.+ ..++|..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++
T Consensus 84 lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR----ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred EEEEecCCCCHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccc
Confidence 9999999999999997542 35899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
........ ........++..|+|||.+.+..++.++||||||+++|||++|..++...... ....+.....
T Consensus 157 ~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~----~~~~~~~~~~ 227 (284)
T cd05081 157 VLPQDKEY-----YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE----FMRMMGNDKQ 227 (284)
T ss_pred cccCCCcc-----eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh----hhhhcccccc
Confidence 76443210 01112223445699999999999999999999999999999988765432210 0000000000
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
.......+...+........+..++..+.+++.+||..+|++|||+.||++.|+.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 228 GQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00000011111222222233445566799999999999999999999999999876
No 85
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1e-35 Score=306.54 Aligned_cols=245 Identities=27% Similarity=0.469 Sum_probs=194.8
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-----CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCc---
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-----GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGN--- 428 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-----g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~--- 428 (669)
.+|.|+| |.||+|... +..+|+|.++. .+.+|++++++++|+||+++++++.....
T Consensus 6 ~lg~G~~-------g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 6 ILGEGEF-------GSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred ccCcCCC-------ceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcccc
Confidence 3899999 999999874 25699998863 35679999999999999999999876554
Q ss_pred ---eeEEEEecCCCCHHHHHhcCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc
Q 005923 429 ---TYLVYEFADNGALSDWLHSNRYQ-TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504 (669)
Q Consensus 429 ---~~lV~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 504 (669)
.++||||+++|+|.+++...+.. ....+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEEC
Confidence 69999999999999998654321 2246899999999999999999999998 9999999999999999999999
Q ss_pred ccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 583 (669)
|||+++......... ......++..|+|||.+.+..++.++||||||+++|||++ |..||.+....+ ...
T Consensus 156 dfg~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~---~~~ 226 (273)
T cd05035 156 DFGLSKKIYSGDYYR------QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE---IYD 226 (273)
T ss_pred Cccceeecccccccc------ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH---HHH
Confidence 999998765432110 1112234678999999999999999999999999999999 888886543211 000
Q ss_pred HHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
. +. + ......+..+...+.+++.+||+.||.+||++.|+++.|+++
T Consensus 227 ~-------------~~---~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 227 Y-------------LR---H-GNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred H-------------HH---c-CCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 00 0 011123344566789999999999999999999999999876
No 86
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=7.5e-36 Score=308.96 Aligned_cols=248 Identities=25% Similarity=0.459 Sum_probs=195.5
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC-------CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK-------GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCV 424 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-------g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~ 424 (669)
|++.. ++|.|+| |.||+|... +..+|+|.++. ++.+|+.++++++|+||+++++++.
T Consensus 8 ~~~~~-~ig~G~~-------g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~ 79 (277)
T cd05062 8 ITMSR-ELGQGSF-------GMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred ceeee-eeccccC-------CeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 44444 4899999 999999864 34699998753 3668999999999999999999999
Q ss_pred ecCceeEEEEecCCCCHHHHHhcCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC
Q 005923 425 HEGNTYLVYEFADNGALSDWLHSNRYQ-----TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL 499 (669)
Q Consensus 425 ~~~~~~lV~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~ 499 (669)
.+...++||||+++|+|.+++++.+.. ....++|..+..++.|++.||+|||+.+ ++||||||+||++++++
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~ 156 (277)
T cd05062 80 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDF 156 (277)
T ss_pred CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCC
Confidence 889999999999999999999764211 1235789999999999999999999998 99999999999999999
Q ss_pred cEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHH
Q 005923 500 RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEA 578 (669)
Q Consensus 500 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~ 578 (669)
.+||+|||+++......... ......++..|+|||.+.++.++.++||||||+++|||++ |..||.+....+
T Consensus 157 ~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~- 229 (277)
T cd05062 157 TVKIGDFGMTRDIYETDYYR------KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ- 229 (277)
T ss_pred CEEECCCCCccccCCcceee------cCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-
Confidence 99999999998654332110 1112345778999999999999999999999999999999 677876543211
Q ss_pred HHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
. . ... .+... ...+..++..+.+++.+||+.||.+|||+.|+++.|+
T Consensus 230 -~----~-~~~------------~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 230 -V----L-RFV------------MEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred -H----H-HHH------------HcCCc-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 0 0 000 00000 1223345567899999999999999999999999886
No 87
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.2e-35 Score=303.43 Aligned_cols=243 Identities=28% Similarity=0.500 Sum_probs=200.0
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEECCCeeEEEEeccc------HHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGD------VSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~~------~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
.|++.+ .+|.|.| |.||++...|+.+|+|.++.+ +.+|+.++++++|+||+++++++..++..++|
T Consensus 7 ~~~~~~-~ig~g~~-------g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 78 (256)
T cd05039 7 ELKLGA-TIGKGEF-------GDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIV 78 (256)
T ss_pred hcccee-eeecCCC-------ceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEE
Confidence 344444 3899999 999999999999999998653 56799999999999999999999988899999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++++|.+++... ....++|..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..
T Consensus 79 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~ 152 (256)
T cd05039 79 TEYMAKGSLVDYLRSR---GRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEA 152 (256)
T ss_pred EEecCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccc
Confidence 9999999999999764 2236899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... ....+..|+|||.+..+.++.++||||||+++|||++ |..||......+ +. ....
T Consensus 153 ~~~~~-----------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~----~~~~- 213 (256)
T cd05039 153 SQGQD-----------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VV----PHVE- 213 (256)
T ss_pred ccccc-----------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---HH----HHHh-
Confidence 33211 1234568999999999999999999999999999997 988887543211 00 0000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
...+...+...+..+.+++.+||..+|.+||+++|++++|+++
T Consensus 214 ------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 214 ------------KGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ------------cCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0111222334456789999999999999999999999999764
No 88
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.5e-35 Score=305.64 Aligned_cols=242 Identities=35% Similarity=0.567 Sum_probs=192.4
Q ss_pred HHhCCCCcccceeeEEEEEEECC--C--eeEEEEecc--------cHHHHHHHHHhc-CCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFKG--D--DAAVKVMKG--------DVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g--~--~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|+| |.||+|...+ . .+++|.++. ++.+|++++.++ +||||+++++++..++..++||
T Consensus 3 lg~g~~-------g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 75 (270)
T cd05047 3 IGEGNF-------GQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 75 (270)
T ss_pred CCCCCC-------ceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEE
Confidence 688999 9999999843 2 468888763 356799999999 8999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEE
Q 005923 434 EFADNGALSDWLHSNRY-----------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAK 502 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~k 502 (669)
||+++|+|.++++..+. .....+++.+++.++.|++.||+|||+.+ ++||||||+|||+++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEE
Confidence 99999999999976431 11235899999999999999999999998 99999999999999999999
Q ss_pred EcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHH
Q 005923 503 ITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELL 581 (669)
Q Consensus 503 l~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~ 581 (669)
|+|||+++...... .......+..|+|||++.+..++.++||||||+++|||++ |..||.+....+ .
T Consensus 153 l~dfgl~~~~~~~~---------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~ 220 (270)
T cd05047 153 IADFGLSRGQEVYV---------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---L 220 (270)
T ss_pred ECCCCCccccchhh---------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH---H
Confidence 99999986432111 0111223567999999999999999999999999999997 999987543211 0
Q ss_pred HHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 582 YASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 582 ~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
... + ......+.+..+...+.+++.+||+.||.+|||+.|++..|.+|.
T Consensus 221 ~~~-------------~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 221 YEK-------------L----PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HHH-------------H----hCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 000 0 011111223334557899999999999999999999999999875
No 89
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-35 Score=311.83 Aligned_cols=257 Identities=28% Similarity=0.496 Sum_probs=202.8
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC---------CCeeEEEEecc--------cHHHHHHHHHhc-CCCCceeEe
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK---------GDDAAVKVMKG--------DVSSEINILKKI-NHSNIIRLS 420 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~---------g~~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~ 420 (669)
.|.+.+ .+|.|+| |.||++... +..+|+|.++. ++.+|+.+++.+ +||||++++
T Consensus 16 ~~~~~~-~lg~G~~-------g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 87 (304)
T cd05101 16 KLTLGK-PLGEGCF-------GQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL 87 (304)
T ss_pred Heeecc-eeeccCC-------ceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchhee
Confidence 344444 4899999 999999751 33689998853 356799999999 899999999
Q ss_pred eEEEecCceeEEEEecCCCCHHHHHhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCC
Q 005923 421 GFCVHEGNTYLVYEFADNGALSDWLHSNRYQ-----------TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLK 489 (669)
Q Consensus 421 g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik 489 (669)
+++...+..++||||+++|+|.+++...+.. ....++|.+++.++.||+.||+|||+++ ++|||||
T Consensus 88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlk 164 (304)
T cd05101 88 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLA 164 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccc
Confidence 9999999999999999999999999864311 1246899999999999999999999999 9999999
Q ss_pred CCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCC
Q 005923 490 TSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GRE 568 (669)
Q Consensus 490 ~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~ 568 (669)
|+|||+++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..
T Consensus 165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~ 238 (304)
T cd05101 165 ARNVLVTENNVMKIADFGLARDVNNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 238 (304)
T ss_pred cceEEEcCCCcEEECCCccceeccccccc------ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999876443211 11222345678999999999999999999999999999998 777
Q ss_pred CCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhc
Q 005923 569 AVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWS 648 (669)
Q Consensus 569 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 648 (669)
|+.+....+ ... .+. ...+...+..++..+.+++.+||+.+|.+||++.|+++.|.++..
T Consensus 239 p~~~~~~~~---~~~----~~~-------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 239 PYPGIPVEE---LFK----LLK-------------EGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred CcccCCHHH---HHH----HHH-------------cCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 776543211 000 010 011112234556778999999999999999999999999999987
Q ss_pred CCCC
Q 005923 649 SSSD 652 (669)
Q Consensus 649 ~~~~ 652 (669)
...+
T Consensus 299 ~~~~ 302 (304)
T cd05101 299 LTTN 302 (304)
T ss_pred hhhc
Confidence 6543
No 90
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.2e-35 Score=308.53 Aligned_cols=256 Identities=26% Similarity=0.438 Sum_probs=197.8
Q ss_pred HHHhCCCCcccceeeEEEEEEE------CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEec--Cce
Q 005923 366 KIATGSFSEENRIQGSVYRGSF------KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHE--GNT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~------~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 429 (669)
.+|.|+| |.||++.+ .+..+|+|..+. .+.+|++++++++||||+++++++... ...
T Consensus 11 ~lg~g~~-------g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 11 VLGEGHF-------GKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred ecccCCC-------cEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 3899999 99988764 356799998863 356799999999999999999998754 357
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+++|+|.+++... .+++.++..++.|++.||+|||+++ ++||||||+|||+++++.+||+|||++
T Consensus 84 ~lv~e~~~~~~l~~~~~~~------~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~ 154 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH------KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLA 154 (283)
T ss_pred EEEecCCCCCCHHHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccc
Confidence 8999999999999999753 4899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 589 (669)
+........ ........++..|+|||.+.+..++.++||||||+++|||++|+.|+........... .. .
T Consensus 155 ~~~~~~~~~-----~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~-~~----~ 224 (283)
T cd05080 155 KAVPEGHEY-----YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMI-GP----K 224 (283)
T ss_pred cccCCcchh-----hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhh-cc----c
Confidence 876543211 0111223456679999999999999999999999999999999999864322110000 00 0
Q ss_pred hhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 590 EESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 590 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
........+...++.......+..++.++.+++.+||+.||.+|||++++++.|+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 225 QGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred ccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 0000011122223333333445566778999999999999999999999999999874
No 91
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.3e-36 Score=319.05 Aligned_cols=232 Identities=25% Similarity=0.379 Sum_probs=192.3
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|+| |.||++.. +|..+|+|+++. .+.+|++++++++||||+++.+++..++..++|||
T Consensus 3 lG~G~~-------g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~E 75 (328)
T cd05593 3 LGKGTF-------GKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVME 75 (328)
T ss_pred eeeCCC-------EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEe
Confidence 789999 99999987 478999999864 24568999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++....
T Consensus 76 y~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~ 147 (328)
T cd05593 76 YVNGGELFFHLSRE-----RVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGIT 147 (328)
T ss_pred CCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCC
Confidence 99999999998754 35899999999999999999999999 99999999999999999999999999875432
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. .......||..|+|||.+.+..++.++|||||||++|||++|+.||.+....+. .. ....
T Consensus 148 ~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~---~~---~~~~---- 209 (328)
T cd05593 148 DA--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FE---LILM---- 209 (328)
T ss_pred cc--------cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH---HH---Hhcc----
Confidence 21 112335789999999999999999999999999999999999999976442110 00 0000
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 642 (669)
. ....|......+.+++.+||+.||.+|| ++.|++++
T Consensus 210 ---------~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 210 ---------E--DIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred ---------C--CccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 0 1123344556789999999999999997 89998865
No 92
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.4e-35 Score=307.39 Aligned_cols=253 Identities=26% Similarity=0.422 Sum_probs=200.9
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC------CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK------GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCV 424 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~------g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~ 424 (669)
.|.+.++ +++|.| |.||+|... +..|++|.++. .+.+|+.++++++|+||+++++++.
T Consensus 7 ~~~~~~~-i~~g~~-------g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~ 78 (280)
T cd05043 7 RVTLSDL-LQEGTF-------GRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCI 78 (280)
T ss_pred heEEeee-ecccCC-------ceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 4555554 899999 999999984 46789998864 2667999999999999999999987
Q ss_pred e-cCceeEEEEecCCCCHHHHHhcCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCc
Q 005923 425 H-EGNTYLVYEFADNGALSDWLHSNRYQ---TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLR 500 (669)
Q Consensus 425 ~-~~~~~lV~e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~ 500 (669)
. +...++++||+++|+|.+++...+.. ....+++.+++.++.|++.||+|||+.+ ++||||||+||++++++.
T Consensus 79 ~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~ 155 (280)
T cd05043 79 EDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQ 155 (280)
T ss_pred cCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCc
Confidence 6 46789999999999999999765321 1246999999999999999999999998 999999999999999999
Q ss_pred EEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHH
Q 005923 501 AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAE 579 (669)
Q Consensus 501 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~ 579 (669)
+||+|||+++........ .......++..|+|||++.+..++.++||||||+++||+++ |+.||......+
T Consensus 156 ~kl~d~g~~~~~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-- 227 (280)
T cd05043 156 VKITDNALSRDLFPMDYH------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-- 227 (280)
T ss_pred EEECCCCCcccccCCceE------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH--
Confidence 999999999866433211 01112345678999999999999999999999999999999 999987644321
Q ss_pred HHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhc
Q 005923 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWS 648 (669)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 648 (669)
... .+. . ......+..++..+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus 228 -~~~----~~~---------~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 228 -MAA----YLK---------D----GYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred -HHH----HHH---------c----CCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 000 000 0 11111223345678999999999999999999999999998864
No 93
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.3e-35 Score=310.62 Aligned_cols=252 Identities=35% Similarity=0.553 Sum_probs=199.1
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEECC--C--eeEEEEecc--------cHHHHHHHHHhc-CCCCceeEeeEEEe
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFKG--D--DAAVKVMKG--------DVSSEINILKKI-NHSNIIRLSGFCVH 425 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g--~--~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~g~~~~ 425 (669)
.|++.++ +|.|+| |.||+|..+. . .+++|.++. ++.+|++++.++ +||||+++++++..
T Consensus 3 ~~~~~~~-lg~g~~-------g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 74 (297)
T cd05089 3 DIKFEDV-IGEGNF-------GQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN 74 (297)
T ss_pred cceeeee-ecCCCc-------ceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc
Confidence 3555554 899999 9999998742 2 468888763 467799999999 79999999999999
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCee
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRYQ-----------TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NIL 494 (669)
.+..++||||+++|+|.++++..+.. ....+++..++.++.|++.||+|||+.+ ++||||||+|||
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil 151 (297)
T cd05089 75 RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVL 151 (297)
T ss_pred CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEE
Confidence 89999999999999999999764211 1235899999999999999999999998 999999999999
Q ss_pred ecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCC
Q 005923 495 LDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGD 573 (669)
Q Consensus 495 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~ 573 (669)
+++++.+||+|||++........ ......+..|+|||.+.+..++.++||||||+++|||++ |..||.+.
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~ 222 (297)
T cd05089 152 VGENLASKIADFGLSRGEEVYVK---------KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGM 222 (297)
T ss_pred ECCCCeEEECCcCCCccccceec---------cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999874322110 111223557999999999999999999999999999998 99998764
Q ss_pred chhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCC
Q 005923 574 QNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSS 650 (669)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 650 (669)
...+ ... .+ ........+..++..+.+++.+||+.||.+||+++++++.|.++....
T Consensus 223 ~~~~---~~~-------------~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 223 TCAE---LYE-------------KL----PQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CHHH---HHH-------------HH----hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 4311 000 00 011112233345567899999999999999999999999999887643
No 94
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.6e-35 Score=308.66 Aligned_cols=257 Identities=23% Similarity=0.388 Sum_probs=195.0
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
..|.+.+ ++|.|+| |.||+|..+ +..||+|.++. .+.+|+.++++++||||+++++++..++
T Consensus 5 ~~y~~~~-~lg~G~~-------g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 76 (288)
T cd07871 5 ETYVKLD-KLGEGTY-------ATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTER 76 (288)
T ss_pred ccceEee-EEecCCC-------EEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 3455544 3899999 999999874 77899998752 3568999999999999999999999888
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
..++||||+++ +|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||
T Consensus 77 ~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG 148 (288)
T cd07871 77 CLTLVFEYLDS-DLKQYLDNC----GNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFG 148 (288)
T ss_pred eEEEEEeCCCc-CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCc
Confidence 99999999985 999998754 235789999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
+++....... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.+....+.. ..+.
T Consensus 149 ~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~---~~~~ 217 (288)
T cd07871 149 LARAKSVPTK--------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEEL---HLIF 217 (288)
T ss_pred ceeeccCCCc--------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHH
Confidence 9986543211 1223467889999999875 56899999999999999999999999865533211 1111
Q ss_pred HHHhhhhH--------HhhhhcccCCccCCCC----cHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 587 RVLEESNV--------REKLRGFIDPSLRNEY----PLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 587 ~~~~~~~~--------~~~l~~~~d~~l~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
........ .+.......+...... ......++.+|+.+||+.||.+|||++|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 218 RLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred HHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11111100 0111111111111100 1123456789999999999999999999985
No 95
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1e-35 Score=310.37 Aligned_cols=246 Identities=31% Similarity=0.536 Sum_probs=197.9
Q ss_pred HHHhCCCCcccceeeEEEEEEECC-------CeeEEEEecc--------cHHHHHHHHHhc-CCCCceeEeeEEEecCce
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKG-------DDAAVKVMKG--------DVSSEINILKKI-NHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g-------~~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 429 (669)
.+|.|.| |.||++...+ ..+|+|.++. ++.+|+++++++ +|+||+++++++..++..
T Consensus 19 ~ig~g~~-------g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 91 (293)
T cd05053 19 PLGEGAF-------GQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL 91 (293)
T ss_pred Eeccccc-------ccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence 3799999 9999998742 4689998864 256799999999 799999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC
Q 005923 430 YLVYEFADNGALSDWLHSNRY-----------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~ 498 (669)
+++|||+++|+|.++++..+. .....+++..+++++.|++.||+|||+.+ ++||||||+|||++++
T Consensus 92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLVTED 168 (293)
T ss_pred EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEEcCC
Confidence 999999999999999975320 23457999999999999999999999998 9999999999999999
Q ss_pred CcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhH
Q 005923 499 LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCE 577 (669)
Q Consensus 499 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~ 577 (669)
+.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..|+.+....+
T Consensus 169 ~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 169 HVMKIADFGLARDIHHIDYY------RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred CeEEeCccccccccccccce------eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 99999999999876443211 11112234678999999999999999999999999999998 888887543211
Q ss_pred HHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 578 AELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
. . ..+ ........+..+...+.+|+.+||+.||.+|||+.|+++.|+++.
T Consensus 243 ~---~----~~~-------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 L---F----KLL-------------KEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred H---H----HHH-------------HcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 0 0 000 011112234445667899999999999999999999999999875
No 96
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=5e-36 Score=319.14 Aligned_cols=238 Identities=22% Similarity=0.353 Sum_probs=194.1
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
++|.|+| |.||+|... ++.||+|+++. .+..|++++.+++||||+++++++..++..++||
T Consensus 8 ~ig~G~~-------g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 8 QVGQGGY-------GQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred EEeecCC-------eEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 3899999 999999984 78999999863 2557999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ..+++.++..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++...
T Consensus 81 e~~~g~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~ 152 (333)
T cd05600 81 EYVPGGDFRTLLNNL-----GVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIV 152 (333)
T ss_pred eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence 999999999999754 35899999999999999999999999 9999999999999999999999999998654
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
.. .....||..|+|||.+.+..++.++|||||||++|||++|+.||.+....+.. ..+..
T Consensus 153 ~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~---~~i~~------ 212 (333)
T cd05600 153 TY-----------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW---ENLKY------ 212 (333)
T ss_pred cc-----------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHH---HHHHh------
Confidence 31 22356899999999999999999999999999999999999999865432211 11100
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
....+..............++.+++.+||..+|.+||++.|++++
T Consensus 213 ----~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 213 ----WKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ----ccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 000011000000012345678999999999999999999999975
No 97
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.1e-36 Score=333.03 Aligned_cols=245 Identities=20% Similarity=0.334 Sum_probs=197.1
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC---CCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCc
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK---GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGN 428 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~---g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 428 (669)
.|.+.++ +|.|+| |.||++... +..|++|.+.. .+..|+.+|+.++||||+++++++..++.
T Consensus 68 ~y~~~~~-lg~G~~-------g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~ 139 (478)
T PTZ00267 68 MYVLTTL-VGRNPT-------TAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDK 139 (478)
T ss_pred eEEEEEE-EEeCCC-------cEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCE
Confidence 3555554 899999 999999863 56788887632 35679999999999999999999999999
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
.+|||||+++|+|.++++... .....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 140 ~~lv~E~~~gg~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgl 215 (478)
T PTZ00267 140 LLLIMEYGSGGDLNKQIKQRL-KEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGF 215 (478)
T ss_pred EEEEEECCCCCCHHHHHHHHH-hccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcC
Confidence 999999999999999986532 22346899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
++....... ........||..|+|||++.+..++.++|||||||++|||++|+.||.+....+ .+...
T Consensus 216 a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~------~~~~~ 283 (478)
T PTZ00267 216 SKQYSDSVS------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE------IMQQV 283 (478)
T ss_pred ceecCCccc------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHH
Confidence 987643221 112334578999999999999999999999999999999999999997644211 01111
Q ss_pred HhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 589 LEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 589 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
+. . . ....+..+...+.+++.+||+.||.+||++.+++.
T Consensus 284 ~~---------~----~-~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 284 LY---------G----K-YDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred Hh---------C----C-CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 10 0 0 01223345567899999999999999999999875
No 98
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.1e-35 Score=308.72 Aligned_cols=240 Identities=22% Similarity=0.315 Sum_probs=192.4
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|.| |+||++.. +++.+|+|.+.. .+..|++++++++|+||+++.+++..+...++|||
T Consensus 1 lg~G~~-------g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 73 (280)
T cd05608 1 LGKGGF-------GEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMT 73 (280)
T ss_pred CCCCCc-------eeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEe
Confidence 478999 99999987 478899999853 24569999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++|+|.+++.... .....+++..++.++.||+.||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 74 ~~~~g~L~~~~~~~~-~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 74 IMNGGDLRYHIYNVD-EENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKD 149 (280)
T ss_pred CCCCCCHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence 999999999886432 23356999999999999999999999999 99999999999999999999999999986543
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
... ......||..|+|||.+.+..++.++||||||+++|||++|+.||..........
T Consensus 150 ~~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~-------------- 207 (280)
T cd05608 150 GQS--------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK-------------- 207 (280)
T ss_pred CCc--------cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHH--------------
Confidence 221 1223568999999999999999999999999999999999999997543211000
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 642 (669)
+......... ..++...+..+.+++.+||+.||.+|| +++|++.+
T Consensus 208 -~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 208 -ELKQRILNDS--VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred -HHHHhhcccC--CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 0001111111 123344566789999999999999999 66777754
No 99
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.6e-35 Score=305.31 Aligned_cols=247 Identities=28% Similarity=0.468 Sum_probs=196.2
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCC----eeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGD----DAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~----~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
.+|+|+| |.||+|.+ +|. .||+|.++. ++.+|+.+++.++|+||++++++|.. ...++
T Consensus 14 ~lg~G~~-------g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 14 VLGSGAF-------GTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred ecCCCCC-------ceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 3899999 99999987 344 379998853 35679999999999999999999964 45789
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
++||+++|+|.++++.. ...+++..++.++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++.
T Consensus 86 ~~~~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 86 VTQLMPYGCLLDYVREN----KDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEcCCCCCHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceee
Confidence 99999999999999754 245899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||....... +...+.
T Consensus 159 ~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-------~~~~~~ 225 (279)
T cd05109 159 LDIDETE------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE-------IPDLLE 225 (279)
T ss_pred cccccce------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHH
Confidence 6532210 01112234678999999999999999999999999999998 888886543211 011111
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCCCC
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSSDW 653 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 653 (669)
.......+..++..+.+++.+||+.||++||++.|+++.|.++......|
T Consensus 226 -------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~~~ 275 (279)
T cd05109 226 -------------KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPSRF 275 (279)
T ss_pred -------------CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCcCe
Confidence 01111222344567899999999999999999999999999887765544
No 100
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-37 Score=314.67 Aligned_cols=239 Identities=26% Similarity=0.416 Sum_probs=199.4
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
|+..+ .+|.|.| |.||+|..+ ++.||+|++.- ++.+|+.+|.+++++||.+++|.+..+..+
T Consensus 15 ~~~~~-~IgrGsf-------G~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~L 86 (467)
T KOG0201|consen 15 YTKLE-LIGRGSF-------GEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKL 86 (467)
T ss_pred cccch-hcccccc-------ceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccH
Confidence 44444 4999999 999999985 77899999852 467899999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
+++|||+.+|++.+.|+.. ..+.+..+.-|+++++.||.|||.++ .+|||||+.|||+..+|.+|++|||.+
T Consensus 87 wiiMey~~gGsv~~lL~~~-----~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa 158 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSG-----NILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVA 158 (467)
T ss_pred HHHHHHhcCcchhhhhccC-----CCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEeccee
Confidence 9999999999999999654 34577777789999999999999999 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 589 (669)
....... ......+||+.|||||++....|+.|+||||||++.+||.+|..|+........
T Consensus 159 ~ql~~~~--------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv----------- 219 (467)
T KOG0201|consen 159 GQLTNTV--------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV----------- 219 (467)
T ss_pred eeeechh--------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE-----------
Confidence 8776543 223568999999999999999999999999999999999999999976432100
Q ss_pred hhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 590 EESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 590 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.-.+.+-..|.+. ..+...+++++..||.+||+.||++.+++++
T Consensus 220 -----lflIpk~~PP~L~----~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 220 -----LFLIPKSAPPRLD----GDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred -----EEeccCCCCCccc----cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 0011111223333 2556679999999999999999999998864
No 101
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=8.9e-36 Score=312.94 Aligned_cols=257 Identities=35% Similarity=0.554 Sum_probs=202.0
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC--CC--eeEEEEecc--------cHHHHHHHHHhc-CCCCceeEeeEEEe
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK--GD--DAAVKVMKG--------DVSSEINILKKI-NHSNIIRLSGFCVH 425 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~--~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~g~~~~ 425 (669)
.|++.+. +|.|+| |.||+|..+ +. .+++|.++. .+.+|++++.++ +|+||+++++++..
T Consensus 8 ~~~~~~~-lg~G~~-------g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~ 79 (303)
T cd05088 8 DIKFQDV-IGEGNF-------GQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH 79 (303)
T ss_pred hceeeee-ecCCCC-------ceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC
Confidence 3455543 899999 999999873 43 357777653 356799999999 89999999999999
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCee
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRYQ-----------TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NIL 494 (669)
++..++||||+++|+|.++++..+.. ....+++.+++.++.|++.||+|||+.+ ++||||||+|||
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nil 156 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNIL 156 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEE
Confidence 99999999999999999999764311 1236899999999999999999999999 999999999999
Q ss_pred ecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCC
Q 005923 495 LDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGD 573 (669)
Q Consensus 495 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~ 573 (669)
+++++.+||+|||+++...... ......++..|+|||.+.+..++.++||||||+++|||++ |..||.+.
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 227 (303)
T cd05088 157 VGENYVAKIADFGLSRGQEVYV---------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 227 (303)
T ss_pred ecCCCcEEeCccccCcccchhh---------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccC
Confidence 9999999999999986432111 0111234567999999998889999999999999999998 99998754
Q ss_pred chhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCCCC
Q 005923 574 QNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSSDW 653 (669)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 653 (669)
...+. ... +. .......+...+..+.+++.+||+.+|.+||++.++++.|.++......|
T Consensus 228 ~~~~~---~~~-------------~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~ 287 (303)
T cd05088 228 TCAEL---YEK-------------LP----QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY 287 (303)
T ss_pred ChHHH---HHH-------------Hh----cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhh
Confidence 32110 000 00 01111223334567899999999999999999999999999998777665
Q ss_pred CC
Q 005923 654 DP 655 (669)
Q Consensus 654 ~~ 655 (669)
..
T Consensus 288 ~~ 289 (303)
T cd05088 288 VN 289 (303)
T ss_pred hh
Confidence 54
No 102
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.8e-35 Score=306.31 Aligned_cols=243 Identities=29% Similarity=0.482 Sum_probs=193.5
Q ss_pred HHHhCCCCcccceeeEEEEEEECC-------CeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKG-------DDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g-------~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
.+|.|+| |.||+|.+.+ ..+++|..+. ++..|+.++++++|+||+++++++.+.+..+
T Consensus 13 ~lg~g~~-------g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05036 13 ALGHGAF-------GEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF 85 (277)
T ss_pred ECCCCCC-------CcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence 3899999 9999999853 4688888752 3678999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC---cEEEcc
Q 005923 431 LVYEFADNGALSDWLHSNRYQ--TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL---RAKITN 505 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~---~~kl~D 505 (669)
+||||+++|+|.++++..+.. ....++|.++++++.||+.||+|||+.+ ++||||||+|||++.++ .+||+|
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEecc
Confidence 999999999999999765321 1235899999999999999999999999 99999999999998654 699999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 584 (669)
||+++........ ........+..|+|||++.+..++.++|||||||++|||++ |+.||.+....+. ..
T Consensus 163 fg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~---~~- 232 (277)
T cd05036 163 FGMARDIYRASYY------RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV---ME- 232 (277)
T ss_pred CccccccCCccce------ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HH-
Confidence 9999876432210 01112233568999999999999999999999999999997 9898876443210 00
Q ss_pred HHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
. +....+...+..++..+.+++.+||+.||++||++.||++.|+
T Consensus 233 ---~-------------~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 233 ---F-------------VTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred ---H-------------HHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 0 0011112334455677899999999999999999999999886
No 103
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.6e-36 Score=316.92 Aligned_cols=233 Identities=25% Similarity=0.387 Sum_probs=191.5
Q ss_pred HHHhCCCCcccceeeEEEEEEE-----CCCeeEEEEecc-----------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 366 KIATGSFSEENRIQGSVYRGSF-----KGDDAAVKVMKG-----------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~-----~g~~vavK~~~~-----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
.+|.|+| |.||++.. .++.+|+|+++. .+..|+++|++++||||+++++++..++..
T Consensus 3 ~lg~G~~-------g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~ 75 (323)
T cd05584 3 VLGKGGY-------GKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKL 75 (323)
T ss_pred eeeecCC-------eEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeE
Confidence 3789999 99999875 467899999863 245799999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+++|+|.+++.+. +.+.+..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 76 ~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 76 YLILEYLSGGELFMHLERE-----GIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred EEEEeCCCCchHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 9999999999999999754 35788899999999999999999999 999999999999999999999999998
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 589 (669)
+...... .......||..|+|||.+.+..++.++||||||+++|||++|+.||.+..... .....
T Consensus 148 ~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~------~~~~~- 212 (323)
T cd05584 148 KESIHEG--------TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK------TIDKI- 212 (323)
T ss_pred eecccCC--------CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH------HHHHH-
Confidence 7543221 11233578999999999999999999999999999999999999998654311 01111
Q ss_pred hhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005923 590 EESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVT 642 (669)
Q Consensus 590 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 642 (669)
.... ...+......+.+++.+||+.||.+|| ++.+++..
T Consensus 213 ------------~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 213 ------------LKGK--LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred ------------HcCC--CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 1111 123334456789999999999999999 78888763
No 104
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.3e-35 Score=301.79 Aligned_cols=241 Identities=28% Similarity=0.439 Sum_probs=193.6
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-----CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-----GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-----g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
++|.|.| |.||+|.+. +..+|+|.++. ++.+|++++++++|+||+++++++. .+..++|
T Consensus 2 ~ig~G~~-------g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v 73 (257)
T cd05060 2 ELGHGNF-------GSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLV 73 (257)
T ss_pred ccCccCc-------eeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEE
Confidence 4789999 999999873 25789998763 3567999999999999999999875 5578999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++|+|.+++.+. ..+++..++.++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||+++..
T Consensus 74 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 74 MELAPLGPLLKYLKKR-----REIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred EEeCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEecccccccee
Confidence 9999999999999764 26899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
...... ........++..|+|||.+.+..++.++||||||+++|||++ |..||......+ .... ...
T Consensus 146 ~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~---~~~~----~~~ 213 (257)
T cd05060 146 GAGSDY-----YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE---VIAM----LES 213 (257)
T ss_pred ecCCcc-----cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH---HHHH----HHc
Confidence 443211 011112234567999999999999999999999999999998 899887543211 1111 100
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
......+..++..+.+++.+||..||.+||++.++++.|+++.
T Consensus 214 -------------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 214 -------------GERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred -------------CCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 0111233445567899999999999999999999999999874
No 105
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.3e-36 Score=319.72 Aligned_cols=236 Identities=29% Similarity=0.409 Sum_probs=194.1
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEECC---CeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFKG---DDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g---~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
.|++.+ .+|.|+| |.||+|.+++ ..+|+|.++. .+.+|+.+++.++||||+++++++.+
T Consensus 31 ~y~~~~-~ig~G~~-------g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~ 102 (340)
T PTZ00426 31 DFNFIR-TLGTGSF-------GRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD 102 (340)
T ss_pred hcEEEE-EEeecCC-------eEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe
Confidence 455444 3899999 9999998742 4799998852 25579999999999999999999999
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcc
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 505 (669)
++..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.+||+|
T Consensus 103 ~~~~~lv~Ey~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~D 174 (340)
T PTZ00426 103 ESYLYLVLEFVIGGEFFTFLRRN-----KRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTD 174 (340)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEec
Confidence 99999999999999999999764 35899999999999999999999999 99999999999999999999999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 585 (669)
||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ....
T Consensus 175 FG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~- 239 (340)
T PTZ00426 175 FGFAKVVDTR-----------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL---IYQK- 239 (340)
T ss_pred CCCCeecCCC-----------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH---HHHH-
Confidence 9999865322 123578999999999999999999999999999999999999998654311 1111
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVT 642 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 642 (669)
.. ... ..+|......+.+++++||+.||.+|+ +++|++++
T Consensus 240 --i~-------------~~~--~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 240 --IL-------------EGI--IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred --Hh-------------cCC--CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 11 000 122334455678999999999999995 88888765
No 106
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3.2e-35 Score=299.16 Aligned_cols=237 Identities=29% Similarity=0.485 Sum_probs=193.0
Q ss_pred HHhCCCCcccceeeEEEEEEEC-CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecC
Q 005923 367 IATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFAD 437 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~ 437 (669)
+|.|+| |.||+|..+ +..+|+|..+. .+.+|++++++++||||+++++++...+..++||||++
T Consensus 3 ig~g~~-------g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 75 (250)
T cd05085 3 LGKGNF-------GEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVP 75 (250)
T ss_pred cCCCCC-------ceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCC
Confidence 788999 999999874 66799998753 36679999999999999999999999999999999999
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCcc
Q 005923 438 NGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517 (669)
Q Consensus 438 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~ 517 (669)
+|+|.+++.... ..+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++.......
T Consensus 76 ~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 148 (250)
T cd05085 76 GGDFLSFLRKKK----DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY 148 (250)
T ss_pred CCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceecccccc
Confidence 999999997542 35899999999999999999999998 99999999999999999999999999975433211
Q ss_pred ccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhhhHHh
Q 005923 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVRE 596 (669)
Q Consensus 518 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (669)
.......++..|+|||++.++.++.++||||||+++||+++ |..||.+....... .
T Consensus 149 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~----------------~ 205 (250)
T cd05085 149 -------SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAR----------------E 205 (250)
T ss_pred -------ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHH----------------H
Confidence 11112244568999999999999999999999999999998 89898754321100 0
Q ss_pred hhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 597 KLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 597 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
.+.. ..+...+..++..+.+++.+||+.+|.+||++.|+++.|.
T Consensus 206 ~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 206 QVEK----GYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHc----CCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 0110 1112233445678899999999999999999999999875
No 107
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.4e-35 Score=309.58 Aligned_cols=248 Identities=27% Similarity=0.454 Sum_probs=197.5
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC-------CCeeEEEEecc--------cHHHHHHHHHhc-CCCCceeEeeEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK-------GDDAAVKVMKG--------DVSSEINILKKI-NHSNIIRLSGFC 423 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-------g~~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~g~~ 423 (669)
|.+.+ .+|+|+| |.||++... +..+|+|.++. .+.+|+++++++ +|+||+++++++
T Consensus 37 ~~~~~-~ig~G~~-------g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 37 LSFGK-TLGAGAF-------GKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred eEEcc-eeeccCC-------eeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 44444 4899999 999999751 34689998753 366899999999 799999999999
Q ss_pred EecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEE
Q 005923 424 VHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKI 503 (669)
Q Consensus 424 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl 503 (669)
...+..++||||+++|+|.++++..+ ...+++.++..++.|++.||+|||+++ ++|+||||+|||++.++.+|+
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l 182 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKR---ESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKI 182 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEE
Confidence 99999999999999999999997542 234899999999999999999999998 999999999999999999999
Q ss_pred cccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHH
Q 005923 504 TNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLY 582 (669)
Q Consensus 504 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~ 582 (669)
+|||+++....... ........++..|+|||.+.+..++.++||||||+++|||++ |..||.+....+.
T Consensus 183 ~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~---- 252 (302)
T cd05055 183 CDFGLARDIMNDSN------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK---- 252 (302)
T ss_pred CCCcccccccCCCc------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH----
Confidence 99999986643221 011222345778999999999999999999999999999998 8998875432110
Q ss_pred HHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 583 ASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 583 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
..... +.......+...+..+.+++.+||+.+|.+|||+.|+++.|+++
T Consensus 253 --~~~~~-------------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 253 --FYKLI-------------KEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred --HHHHH-------------HcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00000 11111122223456789999999999999999999999999875
No 108
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-35 Score=310.51 Aligned_cols=255 Identities=28% Similarity=0.480 Sum_probs=201.5
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC---------CCeeEEEEecc--------cHHHHHHHHHhc-CCCCceeEe
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK---------GDDAAVKVMKG--------DVSSEINILKKI-NHSNIIRLS 420 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~---------g~~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~ 420 (669)
.|.+.+ ++|.|+| |.||++... +..+|+|.++. ++..|+.+++++ +|+||++++
T Consensus 19 ~~~i~~-~lg~G~~-------g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~ 90 (307)
T cd05098 19 RLVLGK-PLGEGCF-------GQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL 90 (307)
T ss_pred HeEEee-eeccCCC-------eeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence 455545 4899999 999999863 24589998863 255799999999 799999999
Q ss_pred eEEEecCceeEEEEecCCCCHHHHHhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCC
Q 005923 421 GFCVHEGNTYLVYEFADNGALSDWLHSNRY-----------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLK 489 (669)
Q Consensus 421 g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik 489 (669)
++|..++..++||||+++|+|.+++...+. .....++|.++++++.|++.||+|||+.+ ++|||||
T Consensus 91 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlk 167 (307)
T cd05098 91 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLA 167 (307)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---ccccccc
Confidence 999999999999999999999999976431 12235899999999999999999999998 9999999
Q ss_pred CCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCC
Q 005923 490 TSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GRE 568 (669)
Q Consensus 490 ~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~ 568 (669)
|+|||++.++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..
T Consensus 168 p~Nill~~~~~~kL~dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~ 241 (307)
T cd05098 168 ARNVLVTEDNVMKIADFGLARDIHHIDYY------KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 241 (307)
T ss_pred HHheEEcCCCcEEECCCcccccccccchh------hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999865432210 11112234568999999999999999999999999999998 888
Q ss_pred CCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhc
Q 005923 569 AVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWS 648 (669)
Q Consensus 569 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 648 (669)
||.+....+ +...+. .....+.+..+..++.+++.+||+.+|.+||++.||++.|.++..
T Consensus 242 p~~~~~~~~-------~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 242 PYPGVPVEE-------LFKLLK-------------EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred CCCcCCHHH-------HHHHHH-------------cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 886543211 000111 111123344556688999999999999999999999999999876
Q ss_pred CC
Q 005923 649 SS 650 (669)
Q Consensus 649 ~~ 650 (669)
..
T Consensus 302 ~~ 303 (307)
T cd05098 302 LT 303 (307)
T ss_pred Hh
Confidence 53
No 109
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.2e-35 Score=301.94 Aligned_cols=246 Identities=29% Similarity=0.502 Sum_probs=197.3
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEECC-CeeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKG-DDAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g-~~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
|++.+ +++.|+| |.||+|..++ ..+|+|.++. ++.+|++++++++|+||+++++++. ++..++|
T Consensus 8 ~~~~~-~lg~g~~-------~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv 78 (262)
T cd05071 8 LRLEV-KLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIV 78 (262)
T ss_pred eeEee-ecCCCCC-------CcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEE
Confidence 55555 4899999 9999998854 4789998864 3678999999999999999999874 5668999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++|+|.+++... ....+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++..
T Consensus 79 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~ 152 (262)
T cd05071 79 TEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI 152 (262)
T ss_pred EEcCCCCcHHHHHhhc---cccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeec
Confidence 9999999999999754 2345899999999999999999999998 999999999999999999999999999866
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||.+....+. ...
T Consensus 153 ~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~---~~~------- 215 (262)
T cd05071 153 EDNEY-------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQ------- 215 (262)
T ss_pred ccccc-------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH---HHH-------
Confidence 43321 11122346678999999999999999999999999999999 7778765432210 000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
+. .......+.+++..+.+++.+||+.||.+||++.++++.|+..+
T Consensus 216 ------~~----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 216 ------VE----RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred ------Hh----cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 00 01111223455667899999999999999999999999998764
No 110
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.4e-35 Score=314.00 Aligned_cols=253 Identities=21% Similarity=0.381 Sum_probs=193.2
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
|++.+ ++|.|+| |.||++... +..+|+|.++. .+.+|++++++++|+||++++++|..++..
T Consensus 7 y~~~~-~lg~g~~-------g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (333)
T cd06650 7 FEKIS-ELGAGNG-------GVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 78 (333)
T ss_pred hheec-cccCCCC-------EEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEE
Confidence 44444 4899999 999999984 67789998753 367899999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKY-TNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~-~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. + ++||||||+|||+++++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred EEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChhhEEEcCCCCEEEeeCCc
Confidence 9999999999999999754 3588999999999999999999974 5 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
++...... .....|+..|+|||.+.+..++.++|||||||++|||++|+.||......+..... ...
T Consensus 151 ~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~---~~~ 217 (333)
T cd06650 151 SGQLIDSM----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMF---GCP 217 (333)
T ss_pred chhhhhhc----------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHh---cCc
Confidence 87653221 12346889999999999999999999999999999999999999754321111000 000
Q ss_pred Hhhhh----------------------------HHhhhhcccCCccCCCCc-HHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 005923 589 LEESN----------------------------VREKLRGFIDPSLRNEYP-LDLAFSMAQLAKNCTAHDLNARPSISEV 639 (669)
Q Consensus 589 ~~~~~----------------------------~~~~l~~~~d~~l~~~~~-~~~~~~l~~li~~Cl~~dP~~RPt~~ev 639 (669)
..... .......+.... ....+ .....++.+|+.+||+.||.+|||+.|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~el 296 (333)
T cd06650 218 VEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEP-PPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQL 296 (333)
T ss_pred ccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCC-CccCCCCCcCHHHHHHHHHhccCCcccCcCHHHH
Confidence 00000 000000000000 00001 1234568999999999999999999999
Q ss_pred HHH
Q 005923 640 FVT 642 (669)
Q Consensus 640 l~~ 642 (669)
+++
T Consensus 297 l~h 299 (333)
T cd06650 297 MVH 299 (333)
T ss_pred hhC
Confidence 765
No 111
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.9e-35 Score=301.18 Aligned_cols=251 Identities=24% Similarity=0.382 Sum_probs=202.7
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEec----------ccHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMK----------GDVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~----------~~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
.|++.+. +|.|.| |.||+|... |+.+++|.++ ..+.+|++++++++|+|++++++++..+
T Consensus 3 ~y~~~~~-lg~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~ 74 (267)
T cd08224 3 NFKIEKK-IGKGQF-------SVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN 74 (267)
T ss_pred ceeeeee-eccCCc-------eEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC
Confidence 3555553 899999 999999984 8899999774 1366899999999999999999999999
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
+..++||||+++|+|.+++.+.. .....+++.+++.++.+++.||.|||+.+ ++||||+|+||+++.++.++|+||
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~ 150 (267)
T cd08224 75 NELNIVLELADAGDLSRMIKHFK-KQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred CeEEEEEecCCCCCHHHHHHHhc-ccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEecc
Confidence 99999999999999999997542 22346899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
|+++....... ......++..|+|||.+.+..++.++||||||+++|||++|+.|+........ .
T Consensus 151 ~~~~~~~~~~~--------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~--- 215 (267)
T cd08224 151 GLGRFFSSKTT--------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY----S--- 215 (267)
T ss_pred ceeeeccCCCc--------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH----H---
Confidence 99886543221 11234578899999999999999999999999999999999999865431100 0
Q ss_pred HHHhhhhHHhhhhcccCCccCCCCcH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 587 RVLEESNVREKLRGFIDPSLRNEYPL-DLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 587 ~~~~~~~~~~~l~~~~d~~l~~~~~~-~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
... .+.. ......+. ..+..+.+++.+||..+|.+|||+.+|++.|++++
T Consensus 216 -~~~------~~~~----~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 216 -LCK------KIEK----CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -HHh------hhhc----CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 000 0000 11112222 45567899999999999999999999999999875
No 112
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.7e-36 Score=320.63 Aligned_cols=229 Identities=29% Similarity=0.406 Sum_probs=189.3
Q ss_pred HHHhCCCCcccceeeEEEEEEE-----CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF-----KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~-----~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
.+|.|+| |.||++.. .|+.+|+|+++. .+..|++++++++||||+++++++..++..|+
T Consensus 3 ~lg~G~~-------g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 75 (318)
T cd05582 3 VLGQGSF-------GKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYL 75 (318)
T ss_pred eeeeCCC-------EEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEE
Confidence 3789999 99998865 478899999863 24569999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
||||+++|+|.+++.+. ..+++..+..++.||+.||+|||+++ ++||||||+|||+++++.+||+|||+++.
T Consensus 76 v~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 76 ILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EEcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 99999999999999654 35899999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... .......|+..|+|||.+.+..++.++||||||+++|||++|+.||.+....+. .....
T Consensus 148 ~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~------~~~i~-- 211 (318)
T cd05582 148 SIDHE--------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET------MTMIL-- 211 (318)
T ss_pred cCCCC--------CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH------HHHHH--
Confidence 54321 122345789999999999998999999999999999999999999986543211 00000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISE 638 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 638 (669)
.. ....|...+..+.+++.+||+.||.+||++.+
T Consensus 212 -----------~~--~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 212 -----------KA--KLGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -----------cC--CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 00 11233445567899999999999999999655
No 113
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3e-35 Score=301.43 Aligned_cols=244 Identities=30% Similarity=0.517 Sum_probs=196.3
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC-CCeeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
|.+.+ ++|+|+| |.||++..+ +..+|+|.++. ++.+|+.++++++|+|++++++++. +...+++
T Consensus 8 ~~~~~-~ig~g~~-------~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv 78 (260)
T cd05070 8 LQLIK-KLGNGQF-------GEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIV 78 (260)
T ss_pred hhhhh-eeccccC-------ceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEE
Confidence 44444 4899999 999999875 56789998863 4678999999999999999999884 5678999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++++|.++++.. ....+++.++..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++...
T Consensus 79 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~ 152 (260)
T cd05070 79 TEYMSKGSLLDFLKDG---EGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLI 152 (260)
T ss_pred EEecCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeec
Confidence 9999999999999754 2345899999999999999999999998 999999999999999999999999999875
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... .......++..|+|||.+.+..++.++||||||+++|||++ |..||.+....+. ...
T Consensus 153 ~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~---~~~------- 215 (260)
T cd05070 153 EDNEY-------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV---LEQ------- 215 (260)
T ss_pred cCccc-------ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH---HHH-------
Confidence 43221 01112235668999999999999999999999999999999 8888875442210 000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 645 (669)
+ ......+.+.+.+..+.+++.+||..||.+|||++++.+.|++
T Consensus 216 ------~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 216 ------V----ERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ------H----HcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0 0111223344556679999999999999999999999999875
No 114
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.9e-35 Score=302.30 Aligned_cols=247 Identities=26% Similarity=0.384 Sum_probs=189.2
Q ss_pred HHHhCCCCcccceeeEEEEEEECC----CeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKG----DDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g----~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
++|.|.| |.||+|...+ ..+++|.++. .+.+|+.++++++||||+++++++.+....++||
T Consensus 2 ~lg~G~~-------g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 74 (269)
T cd05087 2 EIGNGWF-------GKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVM 74 (269)
T ss_pred cccccCC-------ceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEE
Confidence 3789999 9999998743 4689998753 3667999999999999999999999888999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.++++..+......+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~ 151 (269)
T cd05087 75 EFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKY 151 (269)
T ss_pred ECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCcccccccc
Confidence 9999999999998653223345778888999999999999999999 9999999999999999999999999997543
Q ss_pred CCccccCCcccceeeecccccccccccccccC-------CCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHH
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-------VITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-------~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 585 (669)
..... .......++..|+|||++.+. .++.++|+||||+++|||++ |+.||......+. ....
T Consensus 152 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~--~~~~- 222 (269)
T cd05087 152 KEDYY------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV--LTYT- 222 (269)
T ss_pred Cccee------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH--HHHH-
Confidence 32210 111224567889999998642 35889999999999999996 9999975432211 0000
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
..+....+.++.+. ......+.+++..|| .+|.+|||++||+..|+
T Consensus 223 --------~~~~~~~~~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 223 --------VREQQLKLPKPRLK----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred --------hhcccCCCCCCccC----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00111112222221 123446788999999 68999999999998875
No 115
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.8e-35 Score=297.45 Aligned_cols=258 Identities=25% Similarity=0.383 Sum_probs=201.9
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc---------HHHHHHHHHhcCCCC-ceeEeeEEEecC------
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD---------VSSEINILKKINHSN-IIRLSGFCVHEG------ 427 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~---------~~~E~~~l~~l~H~n-iv~l~g~~~~~~------ 427 (669)
++|+|.| |+||+|+. .|+.||+|+++-+ ..+|+-+|++++|+| ||+|.+++..+.
T Consensus 18 klGeGty-------g~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 18 KLGEGTY-------GVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HhCCCCc-------eEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 4899999 99999987 5889999998643 368999999999999 999999998776
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
.++|||||++. +|.+++...... ...++...+..+++||+.||+|||+++ |+||||||.||||+++|.+||+|||
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~-~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKK-PQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhcccc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccc
Confidence 78999999986 999999865311 135777899999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
+|+...-.. ....+.++|.+|+|||++.+. .|++..|+||+||++.||++++..|.++.+ ......+.
T Consensus 166 lAra~~ip~--------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se---~~ql~~If 234 (323)
T KOG0594|consen 166 LARAFSIPM--------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE---IDQLFRIF 234 (323)
T ss_pred hHHHhcCCc--------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH---HHHHHHHH
Confidence 999765332 223456789999999999986 799999999999999999999999988764 22334444
Q ss_pred HHHhhhhHH--hhhhcccCCc--cCCCC-cHHHH-------HHHHHHHHHhcccCCCCCCCHHHHHHH--HHHh
Q 005923 587 RVLEESNVR--EKLRGFIDPS--LRNEY-PLDLA-------FSMAQLAKNCTAHDLNARPSISEVFVT--LSKI 646 (669)
Q Consensus 587 ~~~~~~~~~--~~l~~~~d~~--l~~~~-~~~~~-------~~l~~li~~Cl~~dP~~RPt~~evl~~--L~~i 646 (669)
+.+..+... ..+..+.+.. ..... +.... ....+++.+||+.+|.+|.|++.++.+ ++.+
T Consensus 235 ~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 235 RLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred HHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 444443221 1111111111 11111 11111 367899999999999999999999986 4443
No 116
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.1e-35 Score=301.72 Aligned_cols=242 Identities=32% Similarity=0.525 Sum_probs=195.6
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CC---eeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GD---DAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~---~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
.+|.|+| |.||+|... +. .+++|..+. ++..|++++++++|+|++++.+++...+..++|
T Consensus 12 ~lg~g~~-------g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 12 VIGAGEF-------GEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred EecCCCC-------ccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 3899999 999999873 33 589998753 356799999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++++|.++++.. ...+++.++..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++..
T Consensus 85 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 85 TEYMENGALDKYLRDH----DGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceec
Confidence 9999999999999753 246899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
...... .........+..|+|||++.+..++.++||||||+++|||++ |+.||......+ ....
T Consensus 158 ~~~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~---~~~~------- 222 (268)
T cd05063 158 EDDPEG-----TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE---VMKA------- 222 (268)
T ss_pred cccccc-----ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH---HHHH-------
Confidence 433211 011112233457999999999999999999999999999997 999987543211 1111
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
+. .....+.+.+++..+.+++.+||+.+|.+||++.+|++.|.++
T Consensus 223 ------i~----~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 223 ------IN----DGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ------Hh----cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 0112223345567789999999999999999999999999876
No 117
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.4e-35 Score=314.06 Aligned_cols=252 Identities=26% Similarity=0.456 Sum_probs=189.6
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecC-----ce
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEG-----NT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~ 429 (669)
.+|.|+| |.||+|.. +|..||||.++. .+.+|++++++++||||+++++++.... ..
T Consensus 7 ~lg~G~~-------g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 7 VIGKGSY-------GVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred EEeecCC-------eEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 3899999 99999987 478999998753 2567999999999999999999986432 47
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+. ++|.+++... ..+++..+..++.||+.||+|||+++ ++||||||+|||+++++.+||+|||++
T Consensus 80 ~lv~e~~~-~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 80 YVVFELME-SDLHQVIKAN-----DDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred EEEEecCC-CCHHHHHHhc-----ccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccc
Confidence 99999996 6999998754 35899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeeccccccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN--GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
+........ ........||..|+|||++.+ ..++.++|||||||++|||++|+.||.+...... ...+..
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~---~~~~~~ 222 (338)
T cd07859 151 RVAFNDTPT-----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQ---LDLITD 222 (338)
T ss_pred cccccccCc-----cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHH---HHHHHH
Confidence 865332210 111234578999999999876 6789999999999999999999999976543211 111111
Q ss_pred HHhhh-----------hHHhhhhcccC---CccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 588 VLEES-----------NVREKLRGFID---PSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 588 ~~~~~-----------~~~~~l~~~~d---~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
..... ...+.+..+.. ..+...++ .....+.+++.+||+.||.+|||++|+++.
T Consensus 223 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 223 LLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFP-NADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcC-CCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 11100 00011111110 00000111 234567899999999999999999999975
No 118
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-35 Score=320.95 Aligned_cols=260 Identities=21% Similarity=0.293 Sum_probs=195.4
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
.|++.+ ++|.|+| |.||++.. .++.||+|..+. .+.+|+++|++++||||+++++++..+...++|+|+
T Consensus 93 ~y~~~~-~lg~G~~-------g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 93 GFSILE-TFTPGAE-------GFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred CcEEEE-EEcCCCC-------eEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 355544 3899999 99999988 478899998753 578899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+. ++|.+++... ..+++..++.|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 165 ~~-~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 165 YK-TDLYCYLAAK-----RNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred CC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 95 6899988654 35899999999999999999999999 999999999999999999999999999754321
Q ss_pred ccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchh----HHHHHHHHHHHHHhh
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC----EAELLYASISRVLEE 591 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~----~~~~~~~~~~~~~~~ 591 (669)
. ........||..|+|||++.+..++.++|||||||++|||++|+.|+...... ........+......
T Consensus 236 ~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~ 308 (391)
T PHA03212 236 N-------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGT 308 (391)
T ss_pred c-------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcC
Confidence 1 01123357999999999999999999999999999999999999887643211 011111111111100
Q ss_pred h----------hHHhhh----hc-ccCCccCCCC--cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 592 S----------NVREKL----RG-FIDPSLRNEY--PLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 592 ~----------~~~~~l----~~-~~d~~l~~~~--~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. ...+.. .. ...+..+... ....+.++.+|+.+||+.||.+|||+.|+++.
T Consensus 309 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 309 HPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred ChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0 000000 00 0011111100 11345678999999999999999999999864
No 119
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.6e-35 Score=300.52 Aligned_cols=235 Identities=27% Similarity=0.429 Sum_probs=194.9
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
++.|.| |.||++.. +++.+++|.++. ++.+|++++++++|||++++++++.+++..++||||
T Consensus 8 l~~g~~-------~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 8 IGKGSF-------GVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred ecCCCC-------eEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 889999 99999988 478899998742 366799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+++++|.++++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||+++.....
T Consensus 81 ~~~~~L~~~l~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~ 154 (256)
T cd08529 81 AENGDLHKLLKMQ---RGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN 154 (256)
T ss_pred CCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence 9999999999864 2356899999999999999999999998 999999999999999999999999999876543
Q ss_pred ccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (669)
.. ......++..|+|||++.+..++.++|+||||+++|||++|+.||....... . ....
T Consensus 155 ~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~----~~~~------- 213 (256)
T cd08529 155 TN--------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA--L----ILKI------- 213 (256)
T ss_pred cc--------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--H----HHHH-------
Confidence 21 1223467889999999999999999999999999999999999997654211 0 0000
Q ss_pred hhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 596 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
... .....+...+..+.+++.+||+.+|++||++.++++.
T Consensus 214 --~~~-----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 214 --IRG-----VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred --HcC-----CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 111 1122333456678999999999999999999999864
No 120
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.6e-35 Score=312.66 Aligned_cols=254 Identities=29% Similarity=0.499 Sum_probs=200.7
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC---------CCeeEEEEecc--------cHHHHHHHHHhc-CCCCceeEee
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK---------GDDAAVKVMKG--------DVSSEINILKKI-NHSNIIRLSG 421 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~---------g~~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~g 421 (669)
|++.. .+|.|+| |.||++... +..+|+|..+. ++.+|+++++++ +|+||+++++
T Consensus 14 ~~i~~-~ig~G~~-------g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 14 LTLGK-PLGEGCF-------GQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred eeecc-eeccccC-------CcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence 44444 4899999 999999752 22589998763 366799999999 7999999999
Q ss_pred EEEecCceeEEEEecCCCCHHHHHhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCC
Q 005923 422 FCVHEGNTYLVYEFADNGALSDWLHSNRY-----------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490 (669)
Q Consensus 422 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~ 490 (669)
+|..++..+++|||+++|+|.+++...+. .....++|.+++.++.|++.||+|||+.+ ++||||||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp 162 (334)
T cd05100 86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAA 162 (334)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eecccccc
Confidence 99999999999999999999999976421 12345899999999999999999999998 99999999
Q ss_pred CCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCC
Q 005923 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREA 569 (669)
Q Consensus 491 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p 569 (669)
+|||+++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..|
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p 236 (334)
T cd05100 163 RNVLVTEDNVMKIADFGLARDVHNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP 236 (334)
T ss_pred ceEEEcCCCcEEECCcccceeccccccc------ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999876432211 11122334567999999999999999999999999999998 7888
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcC
Q 005923 570 VTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSS 649 (669)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 649 (669)
|.+....+ ... .+. .......+..++..+.+++.+||+.+|.+||++.|+++.|.++...
T Consensus 237 ~~~~~~~~---~~~----~~~-------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 237 YPGIPVEE---LFK----LLK-------------EGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred CCCCCHHH---HHH----HHH-------------cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 86543211 000 000 0111223334556789999999999999999999999999999854
Q ss_pred C
Q 005923 650 S 650 (669)
Q Consensus 650 ~ 650 (669)
+
T Consensus 297 ~ 297 (334)
T cd05100 297 T 297 (334)
T ss_pred c
Confidence 4
No 121
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-36 Score=304.60 Aligned_cols=258 Identities=24% Similarity=0.391 Sum_probs=200.6
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc---HHHHHHHHHhcCCCCceeEeeEEEecC-----ceeEEEEec
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD---VSSEINILKKINHSNIIRLSGFCVHEG-----NTYLVYEFA 436 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~---~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lV~e~~ 436 (669)
+|+|.| |.||+|... ++.||||+.-.+ -.+|+++|+++.|||||+|+.+|.... ...||||||
T Consensus 32 iG~GsF-------g~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 32 IGSGSF-------GVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred Eeeccc-------ceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 899999 999999984 678999998544 347999999999999999999887432 346899999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC-CcEEEcccCCccccCCC
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN-LRAKITNFGLARSAESD 515 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~-~~~kl~DfGla~~~~~~ 515 (669)
+. +|.++++..- .....++...+.-+.+||++||.|||+.+ |+||||||.|+|+|.+ |.+||||||.|+.+..+
T Consensus 105 P~-tL~~~~r~~~-~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 105 PE-TLYRVIRHYT-RANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG 179 (364)
T ss_pred hH-HHHHHHHHHh-hcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence 97 9999997421 12245777778889999999999999999 9999999999999987 99999999999988765
Q ss_pred ccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. ......|..|+|||.+.+ ..|+.+.||||.|||+.||+-|+..|.|+...+ ....+.+++..+..
T Consensus 180 ep---------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~d---QL~eIik~lG~Pt~ 247 (364)
T KOG0658|consen 180 EP---------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVD---QLVEIIKVLGTPTR 247 (364)
T ss_pred CC---------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHH---HHHHHHHHhCCCCH
Confidence 42 233567889999999987 679999999999999999999999999866432 23344445543332
Q ss_pred Hhhhhcc-------cCCccCC-----CCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHhhcC
Q 005923 595 REKLRGF-------IDPSLRN-----EYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT--LSKIWSS 649 (669)
Q Consensus 595 ~~~l~~~-------~d~~l~~-----~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~~i~~~ 649 (669)
+ .+..+ -.+.+.. -.....+.+..+|+.+++..+|.+|.++.|++.+ +..+...
T Consensus 248 e-~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 248 E-DIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred H-HHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 2 11111 1111111 1334556788999999999999999999999865 5555543
No 122
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.3e-35 Score=301.86 Aligned_cols=247 Identities=25% Similarity=0.379 Sum_probs=187.5
Q ss_pred HHHhCCCCcccceeeEEEEEEEC----CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK----GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~----g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
++|.|.| |.||+|... ...+++|.++. .+.+|+.+++.++|+||+++++.|...+..++||
T Consensus 2 ~lg~G~f-------g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~ 74 (269)
T cd05042 2 EIGNGWF-------GKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVL 74 (269)
T ss_pred cCCccCC-------ceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEE
Confidence 4789999 999999763 23578887642 3567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++...+.......++...+.++.||+.||+|||+.+ ++||||||+|||+++++.+||+|||+++...
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 151 (269)
T cd05042 75 EFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQY 151 (269)
T ss_pred EeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccc
Confidence 9999999999998764333345678889999999999999999999 9999999999999999999999999987643
Q ss_pred CCccccCCcccceeeeccccccccccccccc-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHH
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-------GVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 585 (669)
..... .......++..|+|||++.. ..++.++||||||+++|||++ |..||....+.+ . .
T Consensus 152 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~----~ 219 (269)
T cd05042 152 PEDYY------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ--V----L 219 (269)
T ss_pred cchhe------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH--H----H
Confidence 32210 11122345678999998753 456889999999999999999 677776543211 1 1
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
...... ....+.++. .+...+..+.+++..|| .||.+|||++||++.|+
T Consensus 220 ~~~~~~-----~~~~~~~~~----~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 220 KQVVRE-----QDIKLPKPQ----LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred HHHhhc-----cCccCCCCc----ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 111110 011111222 22344556788999999 59999999999999874
No 123
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.6e-36 Score=302.61 Aligned_cols=238 Identities=24% Similarity=0.443 Sum_probs=202.2
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc----------HHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD----------VSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~----------~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
.|++.+ .+|.|.| |+|-++.. .|+.||||.++.+ +.+|++||+.++||||+.++.+|+++
T Consensus 54 RyE~~e-tLGkGTY-------GKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENk 125 (668)
T KOG0611|consen 54 RYEITE-TLGKGTY-------GKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK 125 (668)
T ss_pred HHHHHH-HhcCCcc-------cceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC
Confidence 577766 5999999 99999976 5899999998753 67899999999999999999999999
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
+...+||||..+|.|.||+... +.|++....++++||..|+.|+|.++ ++|||||.+|||+|.++++||+||
T Consensus 126 dKIvivMEYaS~GeLYDYiSer-----~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADF 197 (668)
T KOG0611|consen 126 DKIVIVMEYASGGELYDYISER-----GSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADF 197 (668)
T ss_pred ceEEEEEEecCCccHHHHHHHh-----ccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeecc
Confidence 9999999999999999999865 56999999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVI-TPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 585 (669)
||+-.+... .+....+|.+.|.+||.+.+..| .+..|-||+||+||-|+.|..||+|.+.. .+
T Consensus 198 GLSNly~~~---------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk---~l---- 261 (668)
T KOG0611|consen 198 GLSNLYADK---------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK---RL---- 261 (668)
T ss_pred chhhhhccc---------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH---HH----
Confidence 999876543 34556899999999999999887 58899999999999999999999986531 11
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
++++-...++++ .-+....-||++||..||.+|-|+.+|..+-
T Consensus 262 ------------vrQIs~GaYrEP---~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 262 ------------VRQISRGAYREP---ETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred ------------HHHhhcccccCC---CCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 112222222221 1223467899999999999999999998764
No 124
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=6.6e-36 Score=317.19 Aligned_cols=232 Identities=24% Similarity=0.368 Sum_probs=191.1
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc----------HHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD----------VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~----------~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|+|+| |.||++.. .|..+|+|.++.+ +..|++++++++||||+++.+++..++..++|||
T Consensus 3 lG~G~~-------g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E 75 (325)
T cd05594 3 LGKGTF-------GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME 75 (325)
T ss_pred eeeCCC-------EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEe
Confidence 789999 99999987 5788999998642 3568899999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~-~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ .+ |+||||||+|||+++++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~ 147 (325)
T cd05594 76 YANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGI 147 (325)
T ss_pred CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecC
Confidence 99999999998754 358999999999999999999997 67 9999999999999999999999999987543
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .......||..|+|||.+.+..++.++|||||||++|||++|+.||.+....+. ... .
T Consensus 148 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~---~~~---i----- 208 (325)
T cd05594 148 KDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FEL---I----- 208 (325)
T ss_pred CCC--------cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH---HHH---H-----
Confidence 221 112235689999999999999999999999999999999999999976543110 000 0
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVT 642 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 642 (669)
... ...+|.....++.+++.+||+.||.+|+ ++.+++++
T Consensus 209 --------~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 209 --------LME--EIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred --------hcC--CCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 000 0122334556789999999999999996 89998864
No 125
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.6e-35 Score=302.24 Aligned_cols=248 Identities=31% Similarity=0.517 Sum_probs=197.6
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC--C---CeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK--G---DDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g---~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
.|++.+ .+|.|.| |.||+|... + ..+|+|.++. ++.+|+.++++++||||+++++++..
T Consensus 5 ~~~~~~-~lg~g~~-------g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 76 (267)
T cd05066 5 CIKIEK-VIGAGEF-------GEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 76 (267)
T ss_pred HeEeee-eecccCC-------CceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 344444 4899999 999999872 2 3689998753 46789999999999999999999999
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcc
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 505 (669)
++..++||||+++|+|.+++... ...+++.+++.++.|++.||+|||+.+ ++||||||+|||++.++.+|++|
T Consensus 77 ~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~d 149 (267)
T cd05066 77 SKPVMIVTEYMENGSLDAFLRKH----DGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSD 149 (267)
T ss_pred CCccEEEEEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCC
Confidence 99999999999999999999754 245899999999999999999999999 99999999999999999999999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 584 (669)
||+++........ ........++..|+|||.+.+..++.++||||||+++||+++ |..||......+ ....
T Consensus 150 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~ 221 (267)
T cd05066 150 FGLSRVLEDDPEA-----AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKA 221 (267)
T ss_pred CCcccccccccce-----eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHH
Confidence 9999876543210 011112233568999999999999999999999999999887 999987543211 0011
Q ss_pred HHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
+. . ..+.+.+..++..+.+++.+||+.+|.+||+|.++++.|+++
T Consensus 222 ----~~---------~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 222 ----IE---------E----GYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ----Hh---------C----CCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 00 0 011122334556789999999999999999999999999875
No 126
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4e-35 Score=309.58 Aligned_cols=255 Identities=30% Similarity=0.507 Sum_probs=200.5
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC---------CCeeEEEEecc--------cHHHHHHHHHhc-CCCCceeEe
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK---------GDDAAVKVMKG--------DVSSEINILKKI-NHSNIIRLS 420 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~---------g~~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~ 420 (669)
.|.+.. ++|.|.| |.||++... ...+|+|.++. ++.+|+++++++ +||||++++
T Consensus 13 ~~~~~~-~lg~G~~-------g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 84 (314)
T cd05099 13 RLVLGK-PLGEGCF-------GQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLL 84 (314)
T ss_pred Heeeee-eecCCCc-------ccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEE
Confidence 344444 4999999 999999752 34689998763 356799999999 699999999
Q ss_pred eEEEecCceeEEEEecCCCCHHHHHhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCC
Q 005923 421 GFCVHEGNTYLVYEFADNGALSDWLHSNRY-----------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLK 489 (669)
Q Consensus 421 g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik 489 (669)
++|..++..++||||+++|+|.+++...+. .....++|..+++++.|++.||.|||+++ ++|||||
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlk 161 (314)
T cd05099 85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLA 161 (314)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecccc
Confidence 999988999999999999999999976421 12246899999999999999999999998 9999999
Q ss_pred CCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCC
Q 005923 490 TSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GRE 568 (669)
Q Consensus 490 ~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~ 568 (669)
|+|||+++++.+||+|||+++........ .......++..|+|||.+.++.++.++||||||+++|||++ |..
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~ 235 (314)
T cd05099 162 ARNVLVTEDNVMKIADFGLARGVHDIDYY------KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGS 235 (314)
T ss_pred ceeEEEcCCCcEEEccccccccccccccc------cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCC
Confidence 99999999999999999999876432211 11112234567999999999999999999999999999999 888
Q ss_pred CCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhc
Q 005923 569 AVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWS 648 (669)
Q Consensus 569 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 648 (669)
||.+....+ ... .... ......+..++.++.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 236 p~~~~~~~~---~~~----~~~~-------------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 236 PYPGIPVEE---LFK----LLRE-------------GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred CCCCCCHHH---HHH----HHHc-------------CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 886543211 111 0000 11112234455678899999999999999999999999999976
Q ss_pred CC
Q 005923 649 SS 650 (669)
Q Consensus 649 ~~ 650 (669)
..
T Consensus 296 ~~ 297 (314)
T cd05099 296 AV 297 (314)
T ss_pred Hh
Confidence 43
No 127
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3e-35 Score=301.44 Aligned_cols=244 Identities=28% Similarity=0.503 Sum_probs=197.3
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE-CCCeeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~-~g~~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
|++.+ ++|.|+| |.||+|.. +++.+|+|.++. ++.+|+.++++++|+|++++++++ .++..+++
T Consensus 8 ~~~~~-~ig~G~~-------g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v 78 (260)
T cd05067 8 LKLVK-KLGAGQF-------GEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYII 78 (260)
T ss_pred ceeee-eeccCcc-------ceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEE
Confidence 34433 4899999 99999988 468899998864 477899999999999999999987 45678999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++|+|.+++... ....+++.++..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++...
T Consensus 79 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 152 (260)
T cd05067 79 TEYMENGSLVDFLKTP---EGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLI 152 (260)
T ss_pred EEcCCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeec
Confidence 9999999999999754 2346899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... .......++..|+|||++.+..++.++||||||+++|||++ |+.||.+....+. ..
T Consensus 153 ~~~~~-------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~-------- 214 (260)
T cd05067 153 EDNEY-------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV---IQ-------- 214 (260)
T ss_pred CCCCc-------ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH---HH--------
Confidence 53221 11122345678999999999999999999999999999999 9999976443211 00
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 645 (669)
.+. ...+.+.+...+.++.+++.+||+.+|.+||++++++..|+.
T Consensus 215 -----~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 215 -----NLE----RGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -----HHH----cCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 010 111122333445679999999999999999999999999875
No 128
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5e-35 Score=299.83 Aligned_cols=244 Identities=27% Similarity=0.445 Sum_probs=189.3
Q ss_pred HHhCCCCcccceeeEEEEEEEC-----CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEe-cCceeEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK-----GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVH-EGNTYLV 432 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~-----g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV 432 (669)
+|.|+| |.||+|.+. ...+|+|.+.. .+..|+.+++.++||||+++++++.. ++..++|
T Consensus 3 lg~g~~-------g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 75 (262)
T cd05058 3 IGKGHF-------GCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVV 75 (262)
T ss_pred ccccCC-------ceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEE
Confidence 789999 999999863 23689998742 35579999999999999999998764 5567999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+.+|+|.+++.+.. ..+++..++.++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++..
T Consensus 76 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 76 LPYMKHGDLRNFIRSET----HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred EecCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccc
Confidence 99999999999997542 34788889999999999999999998 999999999999999999999999999865
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCC-CCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRE-AVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
....... ........++..|+|||.+.+..++.++||||||+++|||++|.. |+......+ .. ..+..
T Consensus 149 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~---~~----~~~~~ 217 (262)
T cd05058 149 YDKEYYS----VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD---IT----VYLLQ 217 (262)
T ss_pred cCCccee----ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----HHHhc
Confidence 4321100 011123345678999999999999999999999999999999654 444332211 00 00000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhc
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWS 648 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 648 (669)
......+...+..+.+++.+||+.+|.+||++.||++.|+++..
T Consensus 218 -------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 218 -------------GRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred -------------CCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 00111222345578999999999999999999999999998864
No 129
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.2e-35 Score=298.39 Aligned_cols=245 Identities=24% Similarity=0.335 Sum_probs=200.9
Q ss_pred HHHhCCCCcccceeeEEEEEEECC--CeeEEEEeccc----------HHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKG--DDAAVKVMKGD----------VSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g--~~vavK~~~~~----------~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.+|+|.- |+||++.++| ...|+|+|..+ ++.|.+||+.++||.++.|++.++.+...||||
T Consensus 84 ~LG~Gdi-------G~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 84 RLGCGDI-------GTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HcCCCCc-------eeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 3899999 9999999976 57899999542 456999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||++||+|...++++ +.+.+++..+.-++.+++.||+|||-.| ||+|||||+||||-++|++.|+||.|+....
T Consensus 157 eyCpGGdL~~LrqkQ---p~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~ 230 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQ---PGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCP 230 (459)
T ss_pred ecCCCccHHHHHhhC---CCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCC
Confidence 999999999999874 6778999999999999999999999999 9999999999999999999999999986432
Q ss_pred CCcc------------------------------ccC------------------CcccceeeecccccccccccccccC
Q 005923 514 SDEH------------------------------EQG------------------GYGLQLTRHVVGTYGYMAPEYIENG 545 (669)
Q Consensus 514 ~~~~------------------------------~~~------------------~~~~~~~~~~~gt~~y~aPE~l~~~ 545 (669)
.... ... ..........+||-.|+|||++.+.
T Consensus 231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~ 310 (459)
T KOG0610|consen 231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE 310 (459)
T ss_pred CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC
Confidence 1000 000 0011233457899999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHh
Q 005923 546 VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNC 625 (669)
Q Consensus 546 ~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~C 625 (669)
..+.++|+|+|||++|||+.|..||.|.+..+ .+..++-..+.-+........+.+||++.
T Consensus 311 GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-------------------Tl~NIv~~~l~Fp~~~~vs~~akDLIr~L 371 (459)
T KOG0610|consen 311 GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-------------------TLRNIVGQPLKFPEEPEVSSAAKDLIRKL 371 (459)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-------------------hHHHHhcCCCcCCCCCcchhHHHHHHHHH
Confidence 99999999999999999999999999877542 22222322222222225567789999999
Q ss_pred cccCCCCCCC----HHHHHHH
Q 005923 626 TAHDLNARPS----ISEVFVT 642 (669)
Q Consensus 626 l~~dP~~RPt----~~evl~~ 642 (669)
|.+||.+|.. +.||-++
T Consensus 372 LvKdP~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 372 LVKDPSKRLGSKRGAAEIKRH 392 (459)
T ss_pred hccChhhhhccccchHHhhcC
Confidence 9999999998 7777654
No 130
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.3e-35 Score=303.65 Aligned_cols=239 Identities=21% Similarity=0.296 Sum_probs=190.2
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|+| |.||++..+ |+.+|+|.+.. .+..|++++++++||||+++.+++..+...++|||
T Consensus 1 lg~G~~-------g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e 73 (277)
T cd05607 1 LGKGGF-------GEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMS 73 (277)
T ss_pred CCCCCc-------eEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEe
Confidence 478999 999999874 78999998853 23458999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++|+|.+++... ....+++..+..++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||++.....
T Consensus 74 ~~~g~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~ 147 (277)
T cd05607 74 LMNGGDLKYHIYNV---GERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKD 147 (277)
T ss_pred cCCCCCHHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCC
Confidence 99999999998654 2245899999999999999999999999 99999999999999999999999999986643
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. ......|+..|+|||++.+..++.++|||||||++|||++|+.||......... ......
T Consensus 148 ~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~--~~~~~~------- 209 (277)
T cd05607 148 GK---------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK--EELKRR------- 209 (277)
T ss_pred Cc---------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH--HHHHHH-------
Confidence 21 122346889999999999999999999999999999999999999753321100 001010
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
........ .....+.++.+|+.+||+.||.+||++.|+++.+
T Consensus 210 ------~~~~~~~~-~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 210 ------TLEDEVKF-EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred ------hhcccccc-ccccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 11111100 0113455689999999999999999998776544
No 131
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.4e-35 Score=314.00 Aligned_cols=232 Identities=25% Similarity=0.400 Sum_probs=190.0
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHhc-CCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|+| |.||+|... ++.+|+|+++.+ +..|.+++..+ +||||+++++++..++..++||
T Consensus 3 lG~G~~-------g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~ 75 (321)
T cd05591 3 LGKGSF-------GKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVM 75 (321)
T ss_pred cccCCC-------eEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEE
Confidence 789999 999999985 668999998642 34688888866 7999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 76 E~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~ 147 (321)
T cd05591 76 EYVNGGDLMFQIQRS-----RKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGI 147 (321)
T ss_pred eCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecc
Confidence 999999999999754 35899999999999999999999999 9999999999999999999999999997643
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .......||..|+|||.+.+..++.++||||||+++|||++|+.||.+....+ ... ....
T Consensus 148 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~---~~~---~i~~--- 210 (321)
T cd05591 148 LNG--------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD---LFE---SILH--- 210 (321)
T ss_pred cCC--------ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH---HHH---HHHc---
Confidence 221 11233568999999999999999999999999999999999999998654321 111 1111
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-------CHHHHHHH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-------SISEVFVT 642 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-------t~~evl~~ 642 (669)
.. ...|..+..++.+++.+||+.||.+|| ++.+++++
T Consensus 211 ----------~~--~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 211 ----------DD--VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred ----------CC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 00 112333456789999999999999999 77777754
No 132
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.4e-35 Score=302.63 Aligned_cols=247 Identities=33% Similarity=0.544 Sum_probs=196.3
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--C---CeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--G---DDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g---~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
|++.+ .+|.|.| |.||+|... + ..||||.++. ++..|+.++++++||||+++.+++..+
T Consensus 6 ~~~~~-~lg~g~~-------g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 77 (269)
T cd05065 6 VKIEE-VIGAGEF-------GEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS 77 (269)
T ss_pred eEEEe-EecCCCC-------CeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC
Confidence 34444 3899999 999999974 2 2589999753 466799999999999999999999999
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
+..++||||+++|+|.+++... .+.+++.+++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+||
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~df 150 (269)
T cd05065 78 RPVMIITEFMENGALDSFLRQN----DGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDF 150 (269)
T ss_pred CceEEEEecCCCCcHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCC
Confidence 9999999999999999999754 245899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecc--cccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVV--GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~--gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 583 (669)
|+++......... ....... .+..|+|||.+.+..++.++||||||+++|||++ |..||......+ ...
T Consensus 151 g~~~~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~---~~~ 222 (269)
T cd05065 151 GLSRFLEDDTSDP-----TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD---VIN 222 (269)
T ss_pred ccccccccCcccc-----ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH---HHH
Confidence 9998654322110 0111111 2457999999999999999999999999999886 999987544211 000
Q ss_pred HHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
. +.. ....+.+.+++..+.+++.+||+.+|.+||++++|+..|+++
T Consensus 223 ~-------------i~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 223 A-------------IEQ----DYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred H-------------HHc----CCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 100 011122344566789999999999999999999999999875
No 133
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=7.1e-35 Score=298.81 Aligned_cols=244 Identities=31% Similarity=0.518 Sum_probs=195.4
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEECC-CeeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKG-DDAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g-~~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
|.+.+ ++|.|+| |.||++..++ ..+++|..+. .+.+|++++++++|+|++++++++. ++..++|
T Consensus 8 ~~~~~-~ig~g~~-------~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05069 8 LRLDV-KLGQGCF-------GEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIV 78 (260)
T ss_pred eeeee-eecCcCC-------CeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEE
Confidence 33334 4899999 9999999854 4789998753 4678999999999999999999874 5678999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++|+|.++++.. ....++|..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||+++..
T Consensus 79 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~ 152 (260)
T cd05069 79 TEFMGKGSLLDFLKEG---DGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLI 152 (260)
T ss_pred EEcCCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEc
Confidence 9999999999999764 2345899999999999999999999998 999999999999999999999999999866
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
...... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.+....+. ...
T Consensus 153 ~~~~~~-------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~------- 215 (260)
T cd05069 153 EDNEYT-------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV---LEQ------- 215 (260)
T ss_pred cCCccc-------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHH-------
Confidence 432210 1112345678999999999999999999999999999999 8888876443211 000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 645 (669)
+.. ......+.+.+..+.+++.+||+.||.+||++++|++.|++
T Consensus 216 ------~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 216 ------VER----GYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ------HHc----CCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 000 11112334556779999999999999999999999999875
No 134
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.6e-35 Score=305.03 Aligned_cols=254 Identities=24% Similarity=0.412 Sum_probs=198.2
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC-------CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFC 423 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-------g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~ 423 (669)
.|++.+ .+|+|.| |.||+|..+ +..+|+|.++. ++.+|+.++++++|+||+++++++
T Consensus 7 ~~~i~~-~lg~G~~-------g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 78 (288)
T cd05061 7 KITLLR-ELGQGSF-------GMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 78 (288)
T ss_pred Hceeee-eecCCCC-------cEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 345544 4999999 999999753 34789998752 356789999999999999999999
Q ss_pred EecCceeEEEEecCCCCHHHHHhcCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC
Q 005923 424 VHEGNTYLVYEFADNGALSDWLHSNRYQ-----TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498 (669)
Q Consensus 424 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~ 498 (669)
...+..++||||+++|+|.+++++.+.. ....+++..+.+++.|++.||.|||+++ ++||||||+|||++++
T Consensus 79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~ 155 (288)
T cd05061 79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 155 (288)
T ss_pred cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCC
Confidence 9889999999999999999999754211 1234678899999999999999999998 9999999999999999
Q ss_pred CcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhH
Q 005923 499 LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCE 577 (669)
Q Consensus 499 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~ 577 (669)
+.+||+|||+++......... ......++..|+|||.+.++.++.++||||||+++|||++ |..||.+....+
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~ 229 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYYR------KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 229 (288)
T ss_pred CcEEECcCCcccccccccccc------ccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999998654322110 1112345678999999999999999999999999999998 677776543211
Q ss_pred HHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcC
Q 005923 578 AELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSS 649 (669)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 649 (669)
... .+.+.. ....+..++..+.+++.+||+.||.+|||+.++++.|.+....
T Consensus 230 ---~~~----------------~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 281 (288)
T cd05061 230 ---VLK----------------FVMDGG-YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 281 (288)
T ss_pred ---HHH----------------HHHcCC-CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCC
Confidence 000 001111 1122334456799999999999999999999999999987654
No 135
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.2e-35 Score=303.88 Aligned_cols=243 Identities=28% Similarity=0.467 Sum_probs=195.9
Q ss_pred HHHhCCCCcccceeeEEEEEEECC-------CeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKG-------DDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g-------~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
++|.|+| |.||+|...+ ..+|+|.+.. .+.+|+.++++++|+||+++++++......+
T Consensus 13 ~lg~g~~-------g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 13 ELGQGSF-------GMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred EecCCCC-------ceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 3899999 9999998743 5699999753 3567999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcc
Q 005923 431 LVYEFADNGALSDWLHSNRYQ-----TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 505 (669)
+||||+++|+|.+++...... ....++|..++.++.|++.||.|||+.+ ++||||||+|||+++++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEECC
Confidence 999999999999999754211 1235899999999999999999999998 99999999999999999999999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 584 (669)
||+++........ .......++..|+|||.+.++.++.++||||||+++|||++ |+.||.+....+. ..
T Consensus 163 fg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~---~~- 232 (277)
T cd05032 163 FGMTRDIYETDYY------RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEV---LK- 232 (277)
T ss_pred cccchhhccCccc------ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHH---HH-
Confidence 9999876443211 11223456788999999998999999999999999999998 8888865432110 00
Q ss_pred HHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
. +. + ......+..++..+.+++.+||+.+|.+|||+.|+++.|+
T Consensus 233 ---~---------~~---~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 233 ---F---------VI---D-GGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred ---H---------Hh---c-CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 0 00 0 1112234445678999999999999999999999999886
No 136
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.3e-35 Score=307.34 Aligned_cols=255 Identities=22% Similarity=0.389 Sum_probs=189.8
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE---CCCeeEEEEecc---------cHHHHHHHHHhc---CCCCceeEeeEEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF---KGDDAAVKVMKG---------DVSSEINILKKI---NHSNIIRLSGFCV 424 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~---~g~~vavK~~~~---------~~~~E~~~l~~l---~H~niv~l~g~~~ 424 (669)
|++.+ ++|.|+| |.||++.. ++..+|+|.++. .+.+|+.+++++ +||||++++++|.
T Consensus 3 Y~~~~-~lg~G~~-------g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~ 74 (290)
T cd07862 3 YECVA-EIGEGAY-------GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 74 (290)
T ss_pred cceee-EeccCCC-------eEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEe
Confidence 44433 4899999 99999987 356799998852 245688777766 6999999999986
Q ss_pred e-----cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC
Q 005923 425 H-----EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL 499 (669)
Q Consensus 425 ~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~ 499 (669)
. ....++||||+. ++|.+++... ....+++..+..++.|++.||+|||+.+ ++||||||+|||+++++
T Consensus 75 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~ 147 (290)
T cd07862 75 VSRTDRETKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSG 147 (290)
T ss_pred cccCCCCCcEEEEEccCC-CCHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCC
Confidence 3 346899999997 6999999754 2345899999999999999999999999 99999999999999999
Q ss_pred cEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHH
Q 005923 500 RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579 (669)
Q Consensus 500 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~ 579 (669)
.+||+|||+++...... ......|+..|+|||.+.+..++.++|||||||++|||++|+.||.+..+.+.
T Consensus 148 ~~kl~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~- 217 (290)
T cd07862 148 QIKLADFGLARIYSFQM---------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ- 217 (290)
T ss_pred CEEEccccceEeccCCc---------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHH-
Confidence 99999999998654321 12335689999999999999999999999999999999999999987554321
Q ss_pred HHHHHHHHHHhhhhHHh---hh---hcccCCccCC---CCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 580 LLYASISRVLEESNVRE---KL---RGFIDPSLRN---EYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 580 ~~~~~~~~~~~~~~~~~---~l---~~~~d~~l~~---~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
...+........... .. .....+.... ....+....+.+++.+||+.||++|||+.|+++
T Consensus 218 --~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 218 --LGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred --HHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 111111111000000 00 0000000000 001123456789999999999999999999985
No 137
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.6e-35 Score=311.38 Aligned_cols=231 Identities=24% Similarity=0.389 Sum_probs=187.1
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHh-cCCCCceeEeeEEEecCceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKK-INHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lV 432 (669)
.+|.|+| |.||+|..+ ++.||+|.++.+ +..|..++.. .+||||+++++++..++..++|
T Consensus 2 ~lG~G~~-------g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv 74 (316)
T cd05592 2 VLGKGSF-------GKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFV 74 (316)
T ss_pred eeeeCCC-------eEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEE
Confidence 3789999 999999984 667999998643 2345666654 4899999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 75 ~e~~~gg~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 75 MEYLNGGDLMFHIQSS-----GRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred EcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 9999999999999754 35899999999999999999999998 999999999999999999999999999864
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEES 592 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (669)
.... .......||..|+|||.+.+..++.++|||||||++|||++|+.||.+....+ .... +
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~---~~~~---i---- 208 (316)
T cd05592 147 MNGE--------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE---LFDS---I---- 208 (316)
T ss_pred CCCC--------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH---HHHH---H----
Confidence 3221 11234578999999999999999999999999999999999999998654321 1111 0
Q ss_pred hHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHH-HHH
Q 005923 593 NVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS-EVF 640 (669)
Q Consensus 593 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl 640 (669)
.. ....++..+..++.+++.+||+.||.+||++. +++
T Consensus 209 ------~~-----~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 209 ------LN-----DRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred ------Hc-----CCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 00 01223344556788999999999999999976 454
No 138
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.5e-35 Score=314.04 Aligned_cols=255 Identities=31% Similarity=0.448 Sum_probs=197.3
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE-------CCCeeEEEEecc--------cHHHHHHHHHhc-CCCCceeEeeE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF-------KGDDAAVKVMKG--------DVSSEINILKKI-NHSNIIRLSGF 422 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~-------~g~~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~g~ 422 (669)
.|++.+. +|.|+| |.||+|.. .++.||||.++. .+.+|+.++.++ +|+||++++++
T Consensus 8 ~~~~~~~-lG~G~f-------g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (343)
T cd05103 8 RLKLGKP-LGRGAF-------GQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 79 (343)
T ss_pred Hhccccc-ccCCcc-------ceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcce
Confidence 4566664 999999 99999974 356899999863 256799999999 78999999998
Q ss_pred EEec-CceeEEEEecCCCCHHHHHhcCCCC--------------------------------------------------
Q 005923 423 CVHE-GNTYLVYEFADNGALSDWLHSNRYQ-------------------------------------------------- 451 (669)
Q Consensus 423 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~-------------------------------------------------- 451 (669)
|... ...++||||+++|+|.++++..+..
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 8654 4578999999999999999753210
Q ss_pred ------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCcccc
Q 005923 452 ------------TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519 (669)
Q Consensus 452 ------------~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 519 (669)
....++|.++.+++.|++.||+|||+++ ++||||||+|||+++++.+||+|||+++........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~- 235 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY- 235 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcch-
Confidence 0124789999999999999999999999 999999999999999999999999999875332110
Q ss_pred CCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhh
Q 005923 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKL 598 (669)
Q Consensus 520 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 598 (669)
.......++..|+|||.+.+..++.++||||||+++|||++ |..|+.+....+. +...+..
T Consensus 236 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~------~~~~~~~------- 297 (343)
T cd05103 236 -----VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRRLKE------- 297 (343)
T ss_pred -----hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH------HHHHHhc-------
Confidence 11122345678999999999999999999999999999997 8888865332110 0001100
Q ss_pred hcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcC
Q 005923 599 RGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSS 649 (669)
Q Consensus 599 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 649 (669)
..+...+......+.+++.+||+.||.+|||+.||++.|+++.+.
T Consensus 298 ------~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 298 ------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred ------cCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 011111222345689999999999999999999999999998764
No 139
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2e-35 Score=329.92 Aligned_cols=247 Identities=23% Similarity=0.351 Sum_probs=198.3
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
..|.+.+. +|.|+| |.||++.. +|+.||||.++. .+.+|+.++..++|+|++++.+.+...
T Consensus 32 ~rY~i~~~-LG~G~f-------G~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~ 103 (496)
T PTZ00283 32 KKYWISRV-LGSGAT-------GTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKK 103 (496)
T ss_pred CCEEEEEE-EecCCC-------EEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecc
Confidence 35666664 999999 99999987 588999999853 356799999999999999998877543
Q ss_pred C--------ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC
Q 005923 427 G--------NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498 (669)
Q Consensus 427 ~--------~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~ 498 (669)
+ ..++||||+++|+|.++++... .....+++..+..++.|++.||+|||+.+ |+||||||+|||++.+
T Consensus 104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~-~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~ 179 (496)
T PTZ00283 104 DPRNPENVLMIALVLDYANAGDLRQEIKSRA-KTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSN 179 (496)
T ss_pred cccCcccceEEEEEEeCCCCCcHHHHHHHhh-ccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCC
Confidence 2 3689999999999999997542 23456899999999999999999999998 9999999999999999
Q ss_pred CcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHH
Q 005923 499 LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA 578 (669)
Q Consensus 499 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~ 578 (669)
+.+||+|||+++....... ........||..|+|||.+.+..++.++||||||+++|||++|+.||.+....+
T Consensus 180 ~~vkL~DFGls~~~~~~~~------~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~- 252 (496)
T PTZ00283 180 GLVKLGDFGFSKMYAATVS------DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE- 252 (496)
T ss_pred CCEEEEecccCeecccccc------ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-
Confidence 9999999999987543211 112334679999999999999999999999999999999999999998654211
Q ss_pred HHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+... +... ....+..++.++.+++.+||+.||.+||++.+++.+
T Consensus 253 -----~~~~~---------~~~~-----~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 253 -----VMHKT---------LAGR-----YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred -----HHHHH---------hcCC-----CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 01011 1111 112344556779999999999999999999999864
No 140
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3e-35 Score=311.15 Aligned_cols=232 Identities=26% Similarity=0.419 Sum_probs=190.4
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHhc-CCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|+| |.||++... +..+|+|+++.+ +..|..++..+ +||||+++++++...+..++||
T Consensus 3 lG~G~~-------g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~ 75 (318)
T cd05570 3 LGKGSF-------GKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVM 75 (318)
T ss_pred eeeCCC-------eEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence 789999 999999984 678999998642 34678888887 6999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++.+. ..+++.++..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++...
T Consensus 76 e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 147 (318)
T cd05570 76 EYVNGGDLMFHIQRS-----GRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGI 147 (318)
T ss_pred cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecC
Confidence 999999999998754 35999999999999999999999999 9999999999999999999999999987532
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .......|+..|+|||++.+..++.++|||||||++|||++|+.||.+....+ .... ..
T Consensus 148 ~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~---~~~~---i~---- 209 (318)
T cd05570 148 LGG--------VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE---LFQS---IL---- 209 (318)
T ss_pred cCC--------CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH---HHHH---HH----
Confidence 221 11233568999999999999999999999999999999999999998654321 1010 00
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI-----SEVFVT 642 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~-----~evl~~ 642 (669)
.. ...++...+..+.+++.+||+.||.+||++ .+++..
T Consensus 210 ---------~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 210 ---------ED--EVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred ---------cC--CCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 00 112233455678999999999999999999 777653
No 141
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.8e-35 Score=307.30 Aligned_cols=257 Identities=23% Similarity=0.367 Sum_probs=192.2
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
|.+.+ ++|.|.| |.||+|.. +++.+|+|+++. .+.+|+.++++++||||+++++++..+...
T Consensus 7 y~~~~-~lg~G~~-------g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 78 (303)
T cd07869 7 YEKLE-KLGEGSY-------ATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETL 78 (303)
T ss_pred ceEee-eEEecCC-------EEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeE
Confidence 44433 4899999 99999998 478899999852 356899999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+. ++|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||++
T Consensus 79 ~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~ 150 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKH----PGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLA 150 (303)
T ss_pred EEEEECCC-cCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcc
Confidence 99999996 6898888754 245889999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
+....... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+..+... ....+...
T Consensus 151 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~ 220 (303)
T cd07869 151 RAKSVPSH--------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD--QLERIFLV 220 (303)
T ss_pred eeccCCCc--------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH--HHHHHHHH
Confidence 75432211 1123467899999999865 4588999999999999999999999986543211 11111111
Q ss_pred HhhhhHH-----hhhhcccCCccCCCCcH---------HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 589 LEESNVR-----EKLRGFIDPSLRNEYPL---------DLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 589 ~~~~~~~-----~~l~~~~d~~l~~~~~~---------~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+...... .....+....+....+. .....+.+|+.+||+.||.+|||+.|++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 221 LGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred hCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 1111000 00000000001000010 122457899999999999999999999863
No 142
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.6e-35 Score=309.46 Aligned_cols=232 Identities=26% Similarity=0.388 Sum_probs=188.0
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHhc-CCCCceeEeeEEEecCceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 432 (669)
.+|.|+| |.||+|... ++.+|+|.++.. +..|..+++.. +||||+++++++.+++..++|
T Consensus 2 ~lG~G~~-------g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 74 (316)
T cd05619 2 MLGKGSF-------GKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFV 74 (316)
T ss_pred eeeeCCC-------EEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEE
Confidence 3789999 999999984 678999998643 33577777764 899999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++|+|.+++... ..+++.++..++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++..
T Consensus 75 ~ey~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 75 MEYLNGGDLMFHIQSC-----HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 9999999999999753 35899999999999999999999999 999999999999999999999999998754
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEES 592 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (669)
.... .......||..|+|||.+.+..++.++|||||||++|||++|+.||.+....+ ....+ .
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~~i----~-- 209 (316)
T cd05619 147 MLGD--------AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE---LFQSI----R-- 209 (316)
T ss_pred CCCC--------CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH---HHHHH----H--
Confidence 2211 11234578999999999999999999999999999999999999998654321 11110 0
Q ss_pred hHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 005923 593 NVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS-EVFV 641 (669)
Q Consensus 593 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl~ 641 (669)
. .. ..++......+.+++.+||+.||.+||++. ++..
T Consensus 210 -------~-~~----~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 210 -------M-DN----PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred -------h-CC----CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 0 00 112233445688999999999999999997 5543
No 143
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2e-35 Score=313.37 Aligned_cols=231 Identities=27% Similarity=0.407 Sum_probs=186.5
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHH---HhcCCCCceeEeeEEEecCceeE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINIL---KKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l---~~l~H~niv~l~g~~~~~~~~~l 431 (669)
+|.|+| |.||++..+ ++.+|||+++.. +..|++++ ++++||||+++++++..++..|+
T Consensus 7 lg~G~~-------g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 7 LGRGHF-------GKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred EeecCC-------EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence 799999 999999884 788999998632 33455544 46689999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
||||+++|+|..+++. ..+++..+..++.||+.||+|||+.+ ++||||||+|||+++++.+||+|||+++.
T Consensus 80 v~E~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~ 150 (324)
T cd05589 80 VMEYAAGGDLMMHIHT------DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKE 150 (324)
T ss_pred EEcCCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCcc
Confidence 9999999999998864 35899999999999999999999999 99999999999999999999999999875
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... .......|+..|+|||.+.+..++.++|||||||++|||++|+.||.+....+. .....
T Consensus 151 ~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~------~~~i~-- 214 (324)
T cd05589 151 GMGFG--------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV------FDSIV-- 214 (324)
T ss_pred CCCCC--------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH------HHHHH--
Confidence 43211 112345789999999999999999999999999999999999999986543211 00010
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVT 642 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 642 (669)
.. ...+|..++..+.+++.+||+.||.+|| ++.++++.
T Consensus 215 -----------~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 215 -----------ND--EVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred -----------hC--CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 00 1123344566789999999999999999 56666653
No 144
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.8e-35 Score=299.62 Aligned_cols=241 Identities=28% Similarity=0.470 Sum_probs=195.0
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEECCCeeEEEEecc-----cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG-----DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~-----~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.|++.+ .+|+|+| |.||+|...+..+|+|..+. .+.+|+.++++++|||++++++++..+ ..++||
T Consensus 7 ~~~~~~-~lg~g~~-------g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 7 KLTLGE-IIGEGEF-------GAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred Hceeee-eeccCCC-------CceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence 355544 3899999 99999999999999999864 367899999999999999999998654 579999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 78 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~ 151 (254)
T cd05083 78 ELMSKGNLVNFLRTR---GRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGS 151 (254)
T ss_pred ECCCCCCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecc
Confidence 999999999999764 2345899999999999999999999998 9999999999999999999999999987643
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEES 592 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (669)
... .....+..|+|||.+.++.++.++|+||||+++|||++ |+.||......+ .... .
T Consensus 152 ~~~-----------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~~----~--- 210 (254)
T cd05083 152 MGV-----------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE---VKEC----V--- 210 (254)
T ss_pred ccC-----------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH---HHHH----H---
Confidence 221 11233567999999999999999999999999999998 888887543211 0000 0
Q ss_pred hHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005923 593 NVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645 (669)
Q Consensus 593 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 645 (669)
....+...+...+..+.+++.+||+.+|.+||+++|+++.|++
T Consensus 211 ----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 211 ----------EKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ----------hCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0111122233455678999999999999999999999998863
No 145
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7.6e-35 Score=304.49 Aligned_cols=256 Identities=24% Similarity=0.422 Sum_probs=195.4
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEECC----------------CeeEEEEecc--------cHHHHHHHHHhcCCC
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFKG----------------DDAAVKVMKG--------DVSSEINILKKINHS 414 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g----------------~~vavK~~~~--------~~~~E~~~l~~l~H~ 414 (669)
.|.+.+ ++|.|+| |.||++...+ ..+|+|.++. ++.+|++++++++|+
T Consensus 6 ~~~~~~-~lg~G~~-------g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~ 77 (295)
T cd05097 6 QLRLKE-KLGEGQF-------GEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNP 77 (295)
T ss_pred hCeehh-ccCCCCC-------ceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 455655 4999999 9999987632 2489998864 366799999999999
Q ss_pred CceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeC
Q 005923 415 NIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ-------TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKN 487 (669)
Q Consensus 415 niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-------~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrD 487 (669)
|++++++++..++..++||||+++++|.+++...... ....++|..++.++.|++.||+|||+.+ ++|||
T Consensus 78 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~d 154 (295)
T cd05097 78 NIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRD 154 (295)
T ss_pred CcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccc
Confidence 9999999999999999999999999999999653210 1124789999999999999999999999 99999
Q ss_pred CCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc--
Q 005923 488 LKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-- 565 (669)
Q Consensus 488 ik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-- 565 (669)
|||+||++++++.+||+|||+++....... ........++..|+|||.+.++.++.++||||||++++||++
T Consensus 155 lkp~Nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~ 228 (295)
T cd05097 155 LATRNCLVGNHYTIKIADFGMSRNLYSGDY------YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLC 228 (295)
T ss_pred cChhhEEEcCCCcEEecccccccccccCcc------eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcC
Confidence 999999999999999999999986543221 111223455778999999999999999999999999999998
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 566 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
+..||......+ ........... .. .......+...+..+.+++.+||+.||.+||++++|++.|+
T Consensus 229 ~~~p~~~~~~~~---~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 229 KEQPYSLLSDEQ---VIENTGEFFRN-----QG-----RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CCCCCcccChHH---HHHHHHHhhhh-----cc-----ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 556665433211 11111111100 00 00001112234567999999999999999999999999886
No 146
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.2e-35 Score=312.56 Aligned_cols=226 Identities=26% Similarity=0.418 Sum_probs=185.9
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHhc-CCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|.| |.||++..+ ++.+|+|+++.+ +..|..++..+ +||||+++++++...+..++||
T Consensus 3 lg~G~~-------g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~ 75 (320)
T cd05590 3 LGKGSF-------GKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVM 75 (320)
T ss_pred eeeCCC-------eEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEE
Confidence 789999 999999984 678999998632 34677888776 6999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++...
T Consensus 76 Ey~~~g~L~~~i~~~-----~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~ 147 (320)
T cd05590 76 EFVNGGDLMFHIQKS-----RRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 147 (320)
T ss_pred cCCCCchHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecC
Confidence 999999999999754 35899999999999999999999999 9999999999999999999999999987643
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .......||..|+|||.+.+..++.++|||||||++|||++|+.||.+....+. .. ....
T Consensus 148 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~---~~---~i~~--- 210 (320)
T cd05590 148 FNG--------KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL---FE---AILN--- 210 (320)
T ss_pred cCC--------CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH---HH---HHhc---
Confidence 221 112335789999999999999999999999999999999999999986543211 01 1110
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 636 (669)
.. ...+......+.+++.+||+.||.+||++
T Consensus 211 ----------~~--~~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 211 ----------DE--VVYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred ----------CC--CCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 00 11233345678999999999999999998
No 147
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.4e-35 Score=313.49 Aligned_cols=239 Identities=23% Similarity=0.360 Sum_probs=189.5
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHhc-CCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|+| |.||++..+ +..+|+|+++.+ +..|..++.++ +||||+++++++..++..++||
T Consensus 3 lG~G~~-------g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05588 3 IGRGSY-------AKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred EeeCCC-------eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEE
Confidence 689999 999999984 778999998642 45688888888 7999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... +.+++..+..++.|++.||+|||+++ ++||||||+|||+++++.+||+|||+++...
T Consensus 76 e~~~~g~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 147 (329)
T cd05588 76 EFVSGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGI 147 (329)
T ss_pred eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccc
Confidence 999999999998654 45999999999999999999999999 9999999999999999999999999987532
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhH--HHHHHHHHHHHHhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE--AELLYASISRVLEE 591 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~ 591 (669)
... .......||..|+|||++.+..++.++|||||||++|||++|+.||......+ .......+...
T Consensus 148 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~--- 216 (329)
T cd05588 148 RPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQV--- 216 (329)
T ss_pred cCC--------CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHH---
Confidence 211 11234578999999999999999999999999999999999999996321100 00000011000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS------ISEVFVT 642 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt------~~evl~~ 642 (669)
+.... ...|..+...+.+++.+||+.||.+||+ +.+++++
T Consensus 217 ---------~~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 217 ---------ILEKQ--IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred ---------HHcCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 11111 1233445567899999999999999997 5676643
No 148
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=9e-35 Score=303.63 Aligned_cols=255 Identities=26% Similarity=0.451 Sum_probs=196.7
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEECC------------------CeeEEEEecc--------cHHHHHHHHHhcCC
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKG------------------DDAAVKVMKG--------DVSSEINILKKINH 413 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g------------------~~vavK~~~~--------~~~~E~~~l~~l~H 413 (669)
|.+.+ ++|.|+| |.||++...+ ..+|+|.++. ++.+|++++++++|
T Consensus 7 ~~~~~-~lg~G~~-------g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~ 78 (296)
T cd05051 7 LNFVE-KLGEGQF-------GEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSD 78 (296)
T ss_pred Ccccc-cccCCCC-------ccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCC
Confidence 44444 4899999 9999988642 3479999853 35679999999999
Q ss_pred CCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeC
Q 005923 414 SNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ------TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKN 487 (669)
Q Consensus 414 ~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrD 487 (669)
|||+++++++..++..++||||+++++|.+++...... ....+++..++.++.|++.||+|||+.+ ++|||
T Consensus 79 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~d 155 (296)
T cd05051 79 PNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRD 155 (296)
T ss_pred CCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccc
Confidence 99999999999999999999999999999999765311 1236899999999999999999999999 99999
Q ss_pred CCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc--
Q 005923 488 LKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-- 565 (669)
Q Consensus 488 ik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-- 565 (669)
|||+||++++++.++|+|||+++....... ........++..|+|||.+.++.++.++||||||+++|||++
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 229 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDY------YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLC 229 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcc------eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcC
Confidence 999999999999999999999986543321 112233456788999999999899999999999999999998
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 566 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
+..|+......+ ........+... +.......+..++.++.+++.+||+.||.+|||+.||++.|+
T Consensus 230 ~~~p~~~~~~~~---~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 230 REQPYEHLTDQQ---VIENAGHFFRDD----------GRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCCCCCCcChHH---HHHHHHhccccc----------cccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 566665433211 111111110000 001111122334467999999999999999999999999886
No 149
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=7.3e-35 Score=298.62 Aligned_cols=243 Identities=23% Similarity=0.352 Sum_probs=196.0
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc------------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG------------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~------------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
|+..+ .+|.|.| |.||++.. .+..+++|.++. .+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~~-~lg~g~~-------~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 75 (263)
T cd06625 4 WRRGK-LLGQGAF-------GRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD 75 (263)
T ss_pred ccccc-eecCCCc-------eEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc
Confidence 44444 3899999 99999986 478999998742 35679999999999999999999999
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcc
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 505 (669)
++..++|+||+++++|.+++... ..+++..+.+++.|++.||.|||+.+ ++||||+|+||++++++.++|+|
T Consensus 76 ~~~~~~v~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 76 DETLSIFMEYMPGGSVKDQLKAY-----GALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred CCeEEEEEEECCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEee
Confidence 99999999999999999999754 35889999999999999999999999 99999999999999999999999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 585 (669)
||+++......... .......++..|+|||.+.+..++.++||||||+++|||++|+.||......+. .
T Consensus 148 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~ 216 (263)
T cd06625 148 FGASKRLQTICSSG-----TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA------I 216 (263)
T ss_pred cccceecccccccc-----ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH------H
Confidence 99998654321110 011234577899999999999999999999999999999999999875432110 0
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. ...........+......+.+++.+||..+|.+|||+.|+++.
T Consensus 217 ~-------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 217 F-------------KIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred H-------------HHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 0 0011111223444566678999999999999999999999864
No 150
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=6.5e-35 Score=302.67 Aligned_cols=244 Identities=27% Similarity=0.440 Sum_probs=194.1
Q ss_pred HHHhCCCCcccceeeEEEEEEE-------CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF-------KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~-------~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
++|.|+| |.||++.. .+..+++|..+. ++.+|++++++++|+||+++++++..++..++
T Consensus 12 ~lg~g~~-------g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 12 ELGEGAF-------GKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred ccCCccC-------CeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 5899999 99999964 245788898753 57789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcE
Q 005923 432 VYEFADNGALSDWLHSNRY----------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA 501 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~ 501 (669)
+|||+++|+|.++++..+. .....+++..++.++.|++.||+|||+.+ ++||||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 9999999999999976421 11235899999999999999999999999 9999999999999999999
Q ss_pred EEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHH
Q 005923 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAEL 580 (669)
Q Consensus 502 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 580 (669)
||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.
T Consensus 162 kL~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-- 233 (280)
T cd05092 162 KIGDFGMSRDIYSTDYY------RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA-- 233 (280)
T ss_pred EECCCCceeEcCCCcee------ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH--
Confidence 99999999865432210 11122345678999999999999999999999999999998 8888865432111
Q ss_pred HHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005923 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645 (669)
Q Consensus 581 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 645 (669)
.. .... ......+..++..+.+++.+||+.||.+||++.||.+.|++
T Consensus 234 ----~~----------~~~~----~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 ----IE----------CITQ----GRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred ----HH----------HHHc----CccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 00 0000 00112233445678999999999999999999999998863
No 151
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.4e-35 Score=310.48 Aligned_cols=230 Identities=25% Similarity=0.399 Sum_probs=187.2
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHhc-CCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|+| |.||++... |+.+|+|.++.+ ...|..++... +||||+++++++.+++..++||
T Consensus 3 lg~G~~-------g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 3 LGKGSF-------GKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVM 75 (316)
T ss_pred eeeCCC-------eEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEE
Confidence 789999 999999984 778999998642 33567777654 8999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 76 E~~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~ 147 (316)
T cd05620 76 EFLNGGDLMFHIQDK-----GRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENV 147 (316)
T ss_pred CCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecc
Confidence 999999999999754 35899999999999999999999999 9999999999999999999999999987532
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .......||..|+|||++.+..++.++|||||||++|||++|+.||.+....+ ....+
T Consensus 148 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~---~~~~~-------- 208 (316)
T cd05620 148 FGD--------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE---LFESI-------- 208 (316)
T ss_pred cCC--------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHHHH--------
Confidence 211 12234578999999999999999999999999999999999999998654311 11110
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHH-HHH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS-EVF 640 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl 640 (669)
.. . ....+.....++.+++.+||+.||.+||++. +++
T Consensus 209 -----~~-~----~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 209 -----RV-D----TPHYPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred -----Hh-C----CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 00 0 1122333456789999999999999999985 555
No 152
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-35 Score=335.67 Aligned_cols=249 Identities=32% Similarity=0.523 Sum_probs=206.8
Q ss_pred HHHhCCCCcccceeeEEEEEEEC---------CCeeEEEEecc--------cHHHHHHHHHhc-CCCCceeEeeEEEecC
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK---------GDDAAVKVMKG--------DVSSEINILKKI-NHSNIIRLSGFCVHEG 427 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~---------g~~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 427 (669)
.+|.|.| |.|++|... ...||||.++. ++..|+++|+.+ +|+||+.++|+|..++
T Consensus 303 ~lg~g~f-------G~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 303 YLGEGAF-------GQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred eeecccc-------cceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 6899999 999999863 23689999863 477899999999 6999999999999999
Q ss_pred ceeEEEEecCCCCHHHHHhcCC---------CCCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeec
Q 005923 428 NTYLVYEFADNGALSDWLHSNR---------YQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLD 496 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~--~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~ 496 (669)
..++|+||+.+|+|.+||+..+ ..... .|+...++.++.|||.||+||++.. +|||||.++|||+.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEec
Confidence 9999999999999999999876 11122 3999999999999999999999998 99999999999999
Q ss_pred CCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCch
Q 005923 497 TNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQN 575 (669)
Q Consensus 497 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~ 575 (669)
++..+||+|||++|.......... ...... -+..|||||.+....|+.++|||||||+||||+| |..|+.+-..
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~----~~~~~~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~ 527 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRT----KSSAGT-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP 527 (609)
T ss_pred CCCEEEEccccceeccCCCCceEe----cCCCCc-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc
Confidence 999999999999997665443210 001111 3567999999999999999999999999999999 7888876321
Q ss_pred hHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhc
Q 005923 576 CEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWS 648 (669)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 648 (669)
.+ .+-+.+.++.+.+.|..|..+++++|+.||+.+|.+||++.|+.+.|+.+..
T Consensus 528 ~~-------------------~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 528 TE-------------------ELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HH-------------------HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 11 0111334456677888899999999999999999999999999999999654
No 153
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5.3e-35 Score=298.58 Aligned_cols=238 Identities=26% Similarity=0.486 Sum_probs=193.3
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-CCeeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCC
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADN 438 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 438 (669)
.+|.|.| |.||++.+. +..+|+|.++. ++..|++++++++|||++++++++......++||||+++
T Consensus 11 ~ig~g~~-------g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 11 EIGSGQF-------GLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred eecCccc-------ceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 4899999 999999885 77899998763 477899999999999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccc
Q 005923 439 GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518 (669)
Q Consensus 439 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~ 518 (669)
|+|.+++...+ ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 155 (256)
T cd05112 84 GCLSDYLRAQR----GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY- 155 (256)
T ss_pred CcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcc-
Confidence 99999997542 35899999999999999999999999 99999999999999999999999999986543211
Q ss_pred cCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhhhHHhh
Q 005923 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREK 597 (669)
Q Consensus 519 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (669)
.......++.+|+|||.+.++.++.++||||||+++|||++ |..||......+ ....
T Consensus 156 ------~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~~------------- 213 (256)
T cd05112 156 ------TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE---VVET------------- 213 (256)
T ss_pred ------cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHH-------------
Confidence 11112335678999999999999999999999999999998 888887544211 1010
Q ss_pred hhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 598 LRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 598 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
+.. ..+...+...+..+.+++.+||+.+|.+||++.|+++.|+
T Consensus 214 ~~~----~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 214 INA----GFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HhC----CCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 000 0011112223467899999999999999999999998873
No 154
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.4e-35 Score=313.37 Aligned_cols=239 Identities=23% Similarity=0.371 Sum_probs=188.7
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHhc-CCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|+| |.||++... ++.+|+|+++.. +..|+.++.++ +||||+++++++..++..++||
T Consensus 3 lG~G~~-------g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 3 IGRGSY-------AKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred eeeCCC-------eEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEE
Confidence 789999 999999884 678999998642 44678888776 7999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ..+++..+..++.|++.||+|||+++ ++||||||+|||++.++.+||+|||+++...
T Consensus 76 E~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~ 147 (329)
T cd05618 76 EYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 147 (329)
T ss_pred eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCcccccc
Confidence 999999999998654 45899999999999999999999999 9999999999999999999999999997543
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhH--HHHHHHHHHHHHhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE--AELLYASISRVLEE 591 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~ 591 (669)
... .......||..|+|||++.+..++.++||||||+++|||++|+.||....... .......+...
T Consensus 148 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~--- 216 (329)
T cd05618 148 RPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV--- 216 (329)
T ss_pred CCC--------CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH---
Confidence 221 11234578999999999999999999999999999999999999996211100 00000000000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS------ISEVFVT 642 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt------~~evl~~ 642 (669)
+.... ...|......+.+++.+||+.||.+||+ +.+++.+
T Consensus 217 ---------i~~~~--~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 217 ---------ILEKQ--IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred ---------HhcCC--CCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 11111 1234455667899999999999999998 4566543
No 155
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-35 Score=326.94 Aligned_cols=250 Identities=23% Similarity=0.349 Sum_probs=200.4
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEec-------ccHHHHHHHHHhcC-CCCceeEeeEE-Eec------Cce
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMK-------GDVSSEINILKKIN-HSNIIRLSGFC-VHE------GNT 429 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~-------~~~~~E~~~l~~l~-H~niv~l~g~~-~~~------~~~ 429 (669)
|++|+| +.||.+... |..+|+|++- ..+.+|+++|++|. |+|||.+++.. ... -+.
T Consensus 45 LAEGGF-------a~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 45 LAEGGF-------AQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EccCCc-------EEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 899999 999999984 3799999983 23678999999996 99999999932 211 257
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
+|+||||.+|+|-|++..+. ...|++..+++|+.|+++|+.+||.. .|||||||||-+||||+.++..||||||.+
T Consensus 118 llLmEyC~gg~Lvd~mn~Rl---q~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRL---QTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred EeehhhccCCcHHHHHHHHH---hccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 89999999999999998652 23499999999999999999999998 589999999999999999999999999999
Q ss_pred cccCCCccccCCc-ccceeeeccccccccccccc---ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHH
Q 005923 510 RSAESDEHEQGGY-GLQLTRHVVGTYGYMAPEYI---ENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 510 ~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~l---~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 585 (669)
.-.........+. ...-.-...-|+-|+|||.+ .+..+++|+|||+|||+||-|+....||++...
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---------- 263 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---------- 263 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----------
Confidence 7543222100000 00001123468899999987 467899999999999999999999999986432
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCC
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSS 650 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 650 (669)
-.+++..+.-+-.......|.+||+.||+.||.+||++-+|++.+.+|.+..
T Consensus 264 -------------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 264 -------------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred -------------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 1234444443333467788999999999999999999999999999998664
No 156
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=9e-35 Score=297.77 Aligned_cols=246 Identities=31% Similarity=0.516 Sum_probs=199.1
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC-CCeeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
.|.+.+ ++|.|+| |.||++..+ +..++||.++. ++.+|+.++++++|+||+++++++..+...++
T Consensus 7 ~~~i~~-~ig~g~~-------~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (261)
T cd05034 7 SLKLER-KLGAGQF-------GEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYI 78 (261)
T ss_pred heeeee-eeccCcc-------eEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEE
Confidence 355544 4899999 999999875 46789998864 47789999999999999999999988889999
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
||||+++++|.+++... ....+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||+++.
T Consensus 79 v~e~~~~~~L~~~i~~~---~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~ 152 (261)
T cd05034 79 VTEYMSKGSLLDFLKSG---EGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARL 152 (261)
T ss_pred EEeccCCCCHHHHHhcc---ccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECcccccee
Confidence 99999999999999764 2346899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
...... .......++..|+|||.+.+..++.++|+||||+++|||++ |+.||.+..... ....
T Consensus 153 ~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~~------ 216 (261)
T cd05034 153 IEDDEY-------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE---VLEQ------ 216 (261)
T ss_pred ccchhh-------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH------
Confidence 653211 01112234568999999999999999999999999999998 999987644321 0010
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 645 (669)
+. ...+...+...+..+.+++.+||+.+|.+||+++|+.+.|+.
T Consensus 217 -------~~----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 217 -------VE----RGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -------HH----cCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00 011122233445678999999999999999999999999875
No 157
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-33 Score=310.60 Aligned_cols=261 Identities=21% Similarity=0.298 Sum_probs=192.3
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEec-ccHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMK-GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~-~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
|.+.. .+|.|+| |.||++... ++.||||... ..+.+|+++|++++|+|||++++++..++..++|||++
T Consensus 171 y~i~~-~Lg~G~~-------G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~ 242 (461)
T PHA03211 171 FAIHR-ALTPGSE-------GCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY 242 (461)
T ss_pred eEEEE-EEccCCC-------eEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence 44444 3788899 999999984 6789999754 35778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
. ++|.+++... ...++|.+++.|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 243 ~-~~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 243 R-SDLYTYLGAR----LRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred C-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 5 6999998653 236999999999999999999999999 9999999999999999999999999998654321
Q ss_pred cccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchh-----HHHHHHHHHHHHHh-
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC-----EAELLYASISRVLE- 590 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~- 590 (669)
. ........||..|+|||++.+..++.++|||||||+||||++|..++...... ....+...+...-.
T Consensus 315 ~------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~ 388 (461)
T PHA03211 315 S------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVH 388 (461)
T ss_pred c------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccc
Confidence 1 11122356999999999999999999999999999999999988766532110 00111111111000
Q ss_pred --hh------hHHhhhhcccCCccCCCC-----c--HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 591 --ES------NVREKLRGFIDPSLRNEY-----P--LDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 591 --~~------~~~~~l~~~~d~~l~~~~-----~--~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.. .....+........+... . ......+.+|+.+||+.||.+|||+.|++++
T Consensus 389 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 389 VDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 000000000000000000 0 0223467899999999999999999999875
No 158
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.9e-35 Score=301.09 Aligned_cols=243 Identities=29% Similarity=0.497 Sum_probs=193.8
Q ss_pred HHhCCCCcccceeeEEEEEEECC--------CeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 367 IATGSFSEENRIQGSVYRGSFKG--------DDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g--------~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
+|.|.| |.||+|...+ ..+++|.++. .+.+|++++++++||||+++++++...+..+
T Consensus 3 lg~g~~-------g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 75 (269)
T cd05044 3 LGSGAF-------GEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQY 75 (269)
T ss_pred cccccc-------eeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeE
Confidence 788999 9999998742 4688887642 3668999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC-----cEEE
Q 005923 431 LVYEFADNGALSDWLHSNRYQ--TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL-----RAKI 503 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~-----~~kl 503 (669)
+||||+++|+|.+++++.... ....++|.+++.++.|++.||+|||+.+ ++|+||||+||+++.+. .+|+
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEE
Confidence 999999999999999764211 2345899999999999999999999998 99999999999999877 8999
Q ss_pred cccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHH
Q 005923 504 TNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLY 582 (669)
Q Consensus 504 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~ 582 (669)
+|||+++........ .......++..|+|||.+.++.++.++||||||+++|||++ |+.||......+. .
T Consensus 153 ~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~---~ 223 (269)
T cd05044 153 GDFGLARDIYKSDYY------RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV---L 223 (269)
T ss_pred CCccccccccccccc------ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH---H
Confidence 999999865432211 11122345678999999999999999999999999999998 9999875443210 0
Q ss_pred HHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005923 583 ASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645 (669)
Q Consensus 583 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 645 (669)
.. . +.......+...+..+.+++.+||..+|.+||++++|++.|++
T Consensus 224 ~~----~-------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 224 QH----V-------------TAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred HH----H-------------hcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 00 0 0011112334456778999999999999999999999998863
No 159
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6.2e-35 Score=303.77 Aligned_cols=237 Identities=24% Similarity=0.335 Sum_probs=193.0
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|+| |.||++.. +++.||+|.++. .+.+|+.++++++||||+++++++..++..++|||
T Consensus 8 lg~G~~-------g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 8 LGKGGF-------GEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred EecCCC-------eEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 799999 99999987 478899998853 24569999999999999999999998899999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++|+|.+++... ....+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||+++....
T Consensus 81 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05605 81 LMNGGDLKFHIYNM---GNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPE 154 (285)
T ss_pred ccCCCcHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 99999999998653 2246899999999999999999999999 99999999999999999999999999986543
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. ......|+..|+|||.+.+..++.++||||||+++|||++|+.||.+..... ....+...
T Consensus 155 ~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~---~~~~~~~~------ 216 (285)
T cd05605 155 GE---------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV---KREEVERR------ 216 (285)
T ss_pred CC---------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh---HHHHHHHH------
Confidence 21 1123468999999999999999999999999999999999999998644311 11111100
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 642 (669)
+.. ....++...+..+.+|+.+||+.||.+|| ++++++.+
T Consensus 217 ---~~~-----~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 217 ---VKE-----DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ---hhh-----cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 100 11223344566789999999999999999 77788654
No 160
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=8.5e-35 Score=301.00 Aligned_cols=231 Identities=23% Similarity=0.409 Sum_probs=182.7
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--------------------------CCeeEEEEecc-------cHHHHHHHHHhcC
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--------------------------GDDAAVKVMKG-------DVSSEINILKKIN 412 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--------------------------g~~vavK~~~~-------~~~~E~~~l~~l~ 412 (669)
.+|.|+| |.||+|.+. ...|++|.++. .+.+|+.++++++
T Consensus 2 ~lG~G~~-------~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~ 74 (274)
T cd05076 2 HLGQGTR-------TNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVS 74 (274)
T ss_pred CcCcccc-------cceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCC
Confidence 3799999 999999852 12478888853 3567889999999
Q ss_pred CCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCC
Q 005923 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492 (669)
Q Consensus 413 H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~N 492 (669)
||||++++++|..+...++||||+++|+|.+++... .+.+++..++.++.|++.||+|||+.+ ++||||||+|
T Consensus 75 h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~N 147 (274)
T cd05076 75 HIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE----KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKN 147 (274)
T ss_pred CCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCccc
Confidence 999999999999999999999999999999999753 246899999999999999999999998 9999999999
Q ss_pred eeecCCC-------cEEEcccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHH
Q 005923 493 ILLDTNL-------RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELL 564 (669)
Q Consensus 493 ILl~~~~-------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~ell 564 (669)
||+++++ .+|++|||++....... ...++..|+|||.+.+ ..++.++||||||+++|||+
T Consensus 148 ill~~~~~~~~~~~~~kl~d~g~~~~~~~~~------------~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~ 215 (274)
T cd05076 148 ILLARLGLAEGTSPFIKLSDPGVSFTALSRE------------ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEIC 215 (274)
T ss_pred EEEeccCcccCccceeeecCCcccccccccc------------ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 9997643 48999999986543211 1346778999998876 56899999999999999995
Q ss_pred -cCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 565 -SGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 565 -tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
+|+.|+......+... .... . ...+......+.+++.+||+.+|.+|||+.+|++.|
T Consensus 216 ~~g~~p~~~~~~~~~~~-------~~~~-------------~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 216 FDGEVPLKERTPSEKER-------FYEK-------------K--HRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred hCCCCCccccChHHHHH-------HHHh-------------c--cCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 6888887543321100 0000 0 011112234689999999999999999999999887
Q ss_pred H
Q 005923 644 S 644 (669)
Q Consensus 644 ~ 644 (669)
+
T Consensus 274 ~ 274 (274)
T cd05076 274 T 274 (274)
T ss_pred C
Confidence 3
No 161
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.3e-35 Score=311.55 Aligned_cols=227 Identities=26% Similarity=0.417 Sum_probs=183.9
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc----------HHHHHH-HHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD----------VSSEIN-ILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~----------~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|+| |.||++.. +|+.+|+|++... +..|.. +++.++||||+++++++..++..++||
T Consensus 3 lg~G~~-------g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~ 75 (323)
T cd05575 3 IGKGSF-------GKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVL 75 (323)
T ss_pred eeeCCC-------eEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEE
Confidence 789999 99999998 4788999998532 223433 467789999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 76 e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~ 147 (323)
T cd05575 76 DYVNGGELFFHLQRE-----RSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGI 147 (323)
T ss_pred cCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccc
Confidence 999999999999754 35899999999999999999999999 9999999999999999999999999987542
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .......||..|+|||.+.+..++.++|||||||++|||++|+.||.+....+ . ......
T Consensus 148 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~---~---~~~i~~--- 210 (323)
T cd05575 148 EHS--------KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE---M---YDNILN--- 210 (323)
T ss_pred cCC--------CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH---H---HHHHHc---
Confidence 211 11234578999999999999999999999999999999999999998654211 0 001110
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 637 (669)
... ..+...+..+.+++.+||+.||.+||++.
T Consensus 211 ----------~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 211 ----------KPL--RLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ----------CCC--CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 000 11223356789999999999999999985
No 162
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=7.1e-35 Score=302.91 Aligned_cols=257 Identities=25% Similarity=0.475 Sum_probs=194.7
Q ss_pred HHHhCCCCcccceeeEEEEEEE------CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEec--Cce
Q 005923 366 KIATGSFSEENRIQGSVYRGSF------KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHE--GNT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~------~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 429 (669)
++|+|+| |.||++.+ .+..+|+|.++. ++.+|++++++++|+|++++.+++... ...
T Consensus 11 ~lg~g~~-------g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 11 DLGEGHF-------GKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred ecCCCCc-------eeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3899999 99999975 366799999862 467899999999999999999998775 567
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+++++|.+++... ...++|..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++
T Consensus 84 ~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN----KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred EEEEEccCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccc
Confidence 9999999999999999654 235899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 589 (669)
+........ ........++..|+|||++.+..++.++||||||+++|||++++.+........... .....
T Consensus 157 ~~~~~~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~----~~~~~ 227 (284)
T cd05079 157 KAIETDKEY-----YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKM----IGPTH 227 (284)
T ss_pred cccccCccc-----eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhh----ccccc
Confidence 876433211 112233456778999999999999999999999999999999876643211100000 00000
Q ss_pred hhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 590 EESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 590 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
.+......+. .+....+.+.+..++..+.+++.+||+.||.+||++.++++.|+++
T Consensus 228 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 228 GQMTVTRLVR-VLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ccccHHHHHH-HHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000000000 0111111222334567899999999999999999999999999876
No 163
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.7e-34 Score=296.70 Aligned_cols=230 Identities=26% Similarity=0.412 Sum_probs=182.2
Q ss_pred HHHhCCCCcccceeeEEEEEEECC--------------CeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKG--------------DDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCV 424 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g--------------~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~ 424 (669)
.+|+|.| |.||+|.+.. ..+++|.+.. .+.+|+.++++++||||+++++++.
T Consensus 2 ~lg~G~~-------~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~ 74 (262)
T cd05077 2 HLGRGTR-------TQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCV 74 (262)
T ss_pred ccccCCc-------ceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 3789999 9999998632 2478888753 3567889999999999999999999
Q ss_pred ecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCc----
Q 005923 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLR---- 500 (669)
Q Consensus 425 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~---- 500 (669)
.+...++||||+++|+|..+++.. ...+++..+++++.||+.||+|||+.+ ++||||||+|||++.++.
T Consensus 75 ~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~ 147 (262)
T cd05077 75 RDVENIMVEEFVEFGPLDLFMHRK----SDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGEC 147 (262)
T ss_pred cCCCCEEEEecccCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCC
Confidence 999999999999999999998753 245899999999999999999999998 999999999999987654
Q ss_pred ---EEEcccCCccccCCCccccCCcccceeeecccccccccccccc-cCCCCchhhHHHHHHHHHHHH-cCCCCCCCCch
Q 005923 501 ---AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE-NGVITPKLDVFAFGVVVLELL-SGREAVTGDQN 575 (669)
Q Consensus 501 ---~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~s~~sDV~S~Gvvl~ell-tg~~p~~~~~~ 575 (669)
+|++|||++...... ....++..|+|||.+. +..++.++||||||+++|||+ +|..|+.....
T Consensus 148 ~~~~~l~d~g~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~ 215 (262)
T cd05077 148 GPFIKLSDPGIPITVLSR------------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL 215 (262)
T ss_pred CceeEeCCCCCCccccCc------------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch
Confidence 899999998765322 1235678899999987 567899999999999999998 57777764332
Q ss_pred hHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 576 CEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
.+.. .... .... ........+.+|+.+||+.||.+||++.+|++.|
T Consensus 216 ~~~~-------~~~~-------------~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 216 AEKE-------RFYE-------------GQCM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred hHHH-------HHHh-------------cCcc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 1100 0000 0000 0111235688999999999999999999999876
No 164
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.2e-35 Score=318.14 Aligned_cols=244 Identities=25% Similarity=0.353 Sum_probs=195.0
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.+|.|+| |.||++... |+.+|+|+++. .+..|++++..++|+||+++++++.+++..++||
T Consensus 8 ~lg~G~~-------g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 8 VIGRGAF-------GEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred EEEeCCc-------EEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 3899999 999999985 88999999863 2567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++.+. ..+++..+..++.||+.||+|||+.+ ++||||||+|||++.++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 152 (350)
T cd05573 81 EYMPGGDLMNLLIRK-----DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMN 152 (350)
T ss_pred cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence 999999999999764 46899999999999999999999998 9999999999999999999999999998764
Q ss_pred CCcccc---------------------CCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 005923 514 SDEHEQ---------------------GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572 (669)
Q Consensus 514 ~~~~~~---------------------~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~ 572 (669)
...... ............||..|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 232 (350)
T cd05573 153 KAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYS 232 (350)
T ss_pred ccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCC
Confidence 432000 00000122345789999999999999999999999999999999999999986
Q ss_pred CchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHH
Q 005923 573 DQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS-ISEVFVT 642 (669)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-~~evl~~ 642 (669)
....+. ...+. .+. ..+..+.....+..+.+++.+|+. ||.+||+ ++|++++
T Consensus 233 ~~~~~~------~~~i~----------~~~-~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 233 DTLQET------YNKII----------NWK-ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCHHHH------HHHHh----------ccC-CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 543211 00111 000 011111111245678999999997 9999999 9999875
No 165
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1e-34 Score=302.22 Aligned_cols=244 Identities=28% Similarity=0.450 Sum_probs=193.8
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-------CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-------GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-------g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
++|.|+| |.||++... +..+|+|.++. ++.+|+.++++++||||+++++++..++..+
T Consensus 12 ~lg~g~~-------g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 12 DIGQGAF-------GRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred ccccccc-------ccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence 4899999 999999863 46789998753 3667999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCe
Q 005923 431 LVYEFADNGALSDWLHSNRY-----------------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~-----------------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NI 493 (669)
+||||+++|+|.+++..... .....+++..++.++.|++.||+|||+.+ ++||||||+||
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~ni 161 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRNC 161 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhhe
Confidence 99999999999999975321 11235889999999999999999999998 99999999999
Q ss_pred eecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCC
Q 005923 494 LLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTG 572 (669)
Q Consensus 494 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~ 572 (669)
|+++++.+||+|||+++........ ........+..|+|||.+.+..++.++|||||||++|||++ |..||.+
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADYY------KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred EecCCCceEECccccceecccCccc------cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999998865432210 01112234567999999999999999999999999999998 8788865
Q ss_pred CchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005923 573 DQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645 (669)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 645 (669)
....+ . .. .. .+... ...+..++.++.+++.+||+.||.+|||+.|+++.|++
T Consensus 236 ~~~~~--~----~~-~~------------~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 236 MAHEE--V----IY-YV------------RDGNV-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CCHHH--H----HH-HH------------hcCCC-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 43211 0 00 00 00111 12233455679999999999999999999999999874
No 166
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-35 Score=282.00 Aligned_cols=242 Identities=27% Similarity=0.428 Sum_probs=202.7
Q ss_pred cccccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEE
Q 005923 356 SLTLYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFC 423 (669)
Q Consensus 356 ~~~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~ 423 (669)
++..|++... +|.|.| |.||.|+.+ +--||+|++.. .+.+|+++-+.++||||++++++|
T Consensus 20 ~l~dfeigr~-LgkgkF-------G~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f 91 (281)
T KOG0580|consen 20 TLDDFEIGRP-LGKGKF-------GNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF 91 (281)
T ss_pred chhhcccccc-ccCCcc-------ccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe
Confidence 3344555554 899999 999999985 55789999842 467899999999999999999999
Q ss_pred EecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEE
Q 005923 424 VHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKI 503 (669)
Q Consensus 424 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl 503 (669)
.++...||++||..+|.|...|+..+ ...+++.....++.|+|.||.|+|..+ ++||||||+|+|++.++.+||
T Consensus 92 hd~~riyLilEya~~gel~k~L~~~~---~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lki 165 (281)
T KOG0580|consen 92 HDSKRIYLILEYAPRGELYKDLQEGR---MKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKI 165 (281)
T ss_pred eccceeEEEEEecCCchHHHHHHhcc---cccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeec
Confidence 99999999999999999999998543 356888888899999999999999999 999999999999999999999
Q ss_pred cccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 504 TNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 504 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
+|||-+...... ......||..|.+||..++...+...|+|++|++.+|++.|..||......+ .+.
T Consensus 166 AdfGwsV~~p~~----------kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e---tYk 232 (281)
T KOG0580|consen 166 ADFGWSVHAPSN----------KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE---TYK 232 (281)
T ss_pred cCCCceeecCCC----------CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH---HHH
Confidence 999998765432 2345789999999999999999999999999999999999999998544221 111
Q ss_pred HHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+.+ .+-.+|........++|.+|+..+|.+|.+..|+++.
T Consensus 233 rI~k------------------~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 233 RIRK------------------VDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred HHHH------------------ccccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1111 1223455667788999999999999999999999875
No 167
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.6e-35 Score=313.53 Aligned_cols=238 Identities=25% Similarity=0.367 Sum_probs=189.4
Q ss_pred HHHhCCCCcccceeeEEEEEEE-----CCCeeEEEEecc-----------cHHHHHHHHHhc-CCCCceeEeeEEEecCc
Q 005923 366 KIATGSFSEENRIQGSVYRGSF-----KGDDAAVKVMKG-----------DVSSEINILKKI-NHSNIIRLSGFCVHEGN 428 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~-----~g~~vavK~~~~-----------~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 428 (669)
.+|.|+| |.||++.. .+..+|+|+++. .+..|+++++++ +|+||+++++++..++.
T Consensus 7 ~lg~G~~-------g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~ 79 (332)
T cd05614 7 VLGTGAY-------GKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAK 79 (332)
T ss_pred EEeecCC-------EEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCE
Confidence 3899999 99999875 467899999853 245699999999 59999999999999999
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 80 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~ 151 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQR-----DNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGL 151 (332)
T ss_pred EEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcC
Confidence 99999999999999999754 35899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
++....... .......||..|+|||.+.+. .++.++|||||||++|||++|+.||.......... .+.
T Consensus 152 ~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~---~~~- 220 (332)
T cd05614 152 SKEFLSEEK-------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQS---EVS- 220 (332)
T ss_pred CccccccCC-------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHH---HHH-
Confidence 986543221 112345789999999999865 47889999999999999999999997432211000 000
Q ss_pred HHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005923 588 VLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVT 642 (669)
Q Consensus 588 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 642 (669)
..+.. .+ ...+......+.+++.+||+.||.+|| ++.+++++
T Consensus 221 --------~~~~~-~~----~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 221 --------RRILK-CD----PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred --------HHHhc-CC----CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 00000 11 123334556789999999999999999 67777654
No 168
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.6e-34 Score=294.11 Aligned_cols=239 Identities=31% Similarity=0.524 Sum_probs=194.3
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
++|.|.| |.||++..+ ++.+++|..+. .+.+|++++++++|+||+++++++......++||||+
T Consensus 2 ~lg~g~~-------g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 74 (251)
T cd05041 2 KIGKGNF-------GDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELV 74 (251)
T ss_pred ccccCCC-------ceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcC
Confidence 3788999 999999985 78899998753 3667999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
++++|.+++.+. ...+++..++.++.+++.||+|||+++ ++||||+|+|||++.++.+||+|||+++......
T Consensus 75 ~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 147 (251)
T cd05041 75 PGGSLLTFLRKK----KNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGI 147 (251)
T ss_pred CCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCc
Confidence 999999999754 235889999999999999999999999 9999999999999999999999999998654321
Q ss_pred cccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhhhHH
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVR 595 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (669)
.. ........+..|+|||.+.++.++.++|+||||+++|||++ |..||.........
T Consensus 148 ~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~---------------- 205 (251)
T cd05041 148 YT------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR---------------- 205 (251)
T ss_pred ce------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHH----------------
Confidence 10 00112234567999999999999999999999999999999 77777654321100
Q ss_pred hhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 596 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
..+ ........+...+..+.+++.+||..+|.+|||+.|+++.|.
T Consensus 206 ~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 206 ERI----ESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHH----hcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 001 111122234455678999999999999999999999999885
No 169
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.8e-34 Score=301.73 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=196.3
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC------------------CCeeEEEEecc--------cHHHHHHHHHhcC
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK------------------GDDAAVKVMKG--------DVSSEINILKKIN 412 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~------------------g~~vavK~~~~--------~~~~E~~~l~~l~ 412 (669)
.|++.+ ++|.|+| |.||++... +..+|+|.++. ++.+|++++++++
T Consensus 6 ~~~~~~-~lg~G~~-------g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (296)
T cd05095 6 RLTFKE-KLGEGQF-------GEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLK 77 (296)
T ss_pred hceeee-eccCCCC-------CeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC
Confidence 355555 4999999 999988542 23589998863 3668999999999
Q ss_pred CCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEee
Q 005923 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ------TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHK 486 (669)
Q Consensus 413 H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHr 486 (669)
|+||+++++++..++..++||||+++|+|.+++...... ....+++.++..++.|++.||+|||+.+ ++||
T Consensus 78 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~ 154 (296)
T cd05095 78 DPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHR 154 (296)
T ss_pred CCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecc
Confidence 999999999999999999999999999999999865311 1235889999999999999999999999 9999
Q ss_pred CCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-
Q 005923 487 NLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS- 565 (669)
Q Consensus 487 Dik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt- 565 (669)
||||+|||+++++.+||+|||+++....... ........++..|++||...++.++.++||||||+++|||++
T Consensus 155 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~ 228 (296)
T cd05095 155 DLATRNCLVGKNYTIKIADFGMSRNLYSGDY------YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTL 228 (296)
T ss_pred cCChheEEEcCCCCEEeccCcccccccCCcc------eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHh
Confidence 9999999999999999999999986543221 011122344678999999988999999999999999999998
Q ss_pred -CCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 566 -GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 566 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
|..|+......+. .......... .... ...+.+..++..+.+++.+||+.||.+||++.||.+.|+
T Consensus 229 ~~~~p~~~~~~~~~---~~~~~~~~~~-----~~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 229 CKEQPYSQLSDEQV---IENTGEFFRD-----QGRQ-----VYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred CCCCCccccChHHH---HHHHHHHHhh-----cccc-----ccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 6677764332111 1111110000 0000 001122334567899999999999999999999999986
Q ss_pred H
Q 005923 645 K 645 (669)
Q Consensus 645 ~ 645 (669)
+
T Consensus 296 ~ 296 (296)
T cd05095 296 E 296 (296)
T ss_pred C
Confidence 3
No 170
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.4e-34 Score=295.24 Aligned_cols=243 Identities=33% Similarity=0.568 Sum_probs=199.0
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-----CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-----GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-----g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
.+|.|+| |.||++... +..+++|.++. .+.+|++++++++|+|++++++++..+...++|
T Consensus 2 ~ig~g~~-------g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 74 (262)
T cd00192 2 KLGEGAF-------GEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLV 74 (262)
T ss_pred ccccCCc-------eEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEE
Confidence 3789999 999999985 67899999864 355799999999999999999999998999999
Q ss_pred EEecCCCCHHHHHhcCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 433 YEFADNGALSDWLHSNRYQ----TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
|||+++|+|.+++...... ....+++..+.+++.|++.||+|||+++ ++||||+|+||++++++.+||+|||.
T Consensus 75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~ 151 (262)
T cd00192 75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGL 151 (262)
T ss_pred EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccc
Confidence 9999999999999764210 1356999999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 587 (669)
++....... ........++..|+|||.+....++.++||||||++++||++ |..||......+ ...
T Consensus 152 ~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~---- 218 (262)
T cd00192 152 SRDVYDDDY------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---VLE---- 218 (262)
T ss_pred ccccccccc------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH---HHH----
Confidence 987754321 112234567889999999998899999999999999999999 588887653211 100
Q ss_pred HHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 588 VLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 588 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
.+.. ......+..++.++.+++.+||+.||.+|||+.|++..|+
T Consensus 219 ---------~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 219 ---------YLRK----GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---------HHHc----CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1111 1122334455678999999999999999999999998873
No 171
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.1e-35 Score=311.96 Aligned_cols=230 Identities=27% Similarity=0.388 Sum_probs=184.8
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHH-HHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEI-NILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~-~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|+| |.||++... ++.+|+|+++.. +..|. .+++.++|+||+++++++..++..++||
T Consensus 3 lg~G~f-------g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05602 3 IGKGSF-------GKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVL 75 (325)
T ss_pred eeeCCC-------eEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEE
Confidence 789999 999999884 667999998531 22333 3467789999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ..+.+..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 76 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~ 147 (325)
T cd05602 76 DYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENI 147 (325)
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccc
Confidence 999999999999754 35788889999999999999999999 9999999999999999999999999997543
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .......||..|+|||.+.+..++.++|||||||++|||++|+.||.+....+. .. ....
T Consensus 148 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~---~i~~--- 210 (325)
T cd05602 148 EHN--------GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM---YD---NILN--- 210 (325)
T ss_pred cCC--------CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH---HH---HHHh---
Confidence 221 112345789999999999999999999999999999999999999986543211 01 1110
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 640 (669)
.. ...+......+.+++.+||+.||.+||++.+.+
T Consensus 211 ----------~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 211 ----------KP--LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred ----------CC--cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 00 111223455789999999999999999987544
No 172
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.5e-35 Score=323.05 Aligned_cols=264 Identities=23% Similarity=0.390 Sum_probs=195.2
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc---HHHHHHHHHhcCCCCceeEeeEEEec-------
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD---VSSEINILKKINHSNIIRLSGFCVHE------- 426 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~---~~~E~~~l~~l~H~niv~l~g~~~~~------- 426 (669)
.|++.+. +|.|+| |.||+|.. .++.||||++..+ ..+|+.+|++++||||+++++++...
T Consensus 67 ~y~~~~~-LG~G~f-------g~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 67 SYKLGNI-IGNGSF-------GVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred eEEEeEE-EEeCCC-------EEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 4555553 899999 99999987 4788999988543 45799999999999999999886432
Q ss_pred -CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC-cEEEc
Q 005923 427 -GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL-RAKIT 504 (669)
Q Consensus 427 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~-~~kl~ 504 (669)
...++||||+++ +|.+++.... .....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 139 ~~~l~lvmE~~~~-~l~~~~~~~~-~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 139 NIFLNVVMEFIPQ-TVHKYMKHYA-RNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred ceEEEEEEecCCc-cHHHHHHHHh-hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeee
Confidence 236789999985 7888775431 22356999999999999999999999999 99999999999998664 79999
Q ss_pred ccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
|||+++....... .....||..|+|||++.+ ..++.++|||||||++|||++|..||.+....+. + .
T Consensus 214 DFGla~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~--~-~ 281 (440)
T PTZ00036 214 DFGSAKNLLAGQR---------SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ--L-V 281 (440)
T ss_pred ccccchhccCCCC---------cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--H-H
Confidence 9999987643221 123467899999999876 4689999999999999999999999987654221 1 1
Q ss_pred HHHHHHhhhhHHhhhh-------c-----ccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHhhc
Q 005923 584 SISRVLEESNVREKLR-------G-----FIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT--LSKIWS 648 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~-------~-----~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~~i~~ 648 (669)
.+...+..... +.+. . .....+...+|...+.++.+|+.+||+.||.+|||+.|++.+ +..+..
T Consensus 282 ~i~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 282 RIIQVLGTPTE-DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred HHHHHhCCCCH-HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 11111111110 0000 0 001111122333445678999999999999999999999955 555544
No 173
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=298.00 Aligned_cols=257 Identities=25% Similarity=0.414 Sum_probs=199.2
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEe-----cCce
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVH-----EGNT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~-----~~~~ 429 (669)
.+|.|.| |.|..+.. .|+.||||++.. +..+|+++|+.++|+||+.+.+++.. -...
T Consensus 29 ~iG~GAy-------GvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 29 PIGRGAY-------GVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred cccCcce-------eeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 4899999 99999988 488999999863 34579999999999999999999875 2467
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
|+|+|+|+. +|...++.+ ..|+......+++|+++||.|+|+.+ ++||||||+|+|++.+..+||+|||+|
T Consensus 102 YiV~elMet-DL~~iik~~-----~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 102 YLVFELMET-DLHQIIKSQ-----QDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred EEehhHHhh-HHHHHHHcC-----ccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccce
Confidence 999999964 999999764 35999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
|...... . ....+..+.|.+|.|||.+.. ..||...||||.||++.||++|+..|.|.+..+ ....+..+
T Consensus 173 R~~~~~~-~-----~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~---Ql~lI~~~ 243 (359)
T KOG0660|consen 173 RYLDKFF-E-----DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVH---QLQLILEL 243 (359)
T ss_pred eeccccC-c-----ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHH---HHHHHHHh
Confidence 9886431 1 112344677999999999864 789999999999999999999999999865432 22222222
Q ss_pred Hhhhh-----------HHhhhhcccC---CccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHhhc
Q 005923 589 LEESN-----------VREKLRGFID---PSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT--LSKIWS 648 (669)
Q Consensus 589 ~~~~~-----------~~~~l~~~~d---~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~~i~~ 648 (669)
+..+. .+..++.+.. ..+...+| .......+|+.+||..||.+|+|++|.+++ |+....
T Consensus 244 lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hd 318 (359)
T KOG0660|consen 244 LGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHD 318 (359)
T ss_pred cCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcC
Confidence 22211 1111111110 01111122 345568899999999999999999999987 555544
No 174
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.2e-35 Score=311.28 Aligned_cols=227 Identities=26% Similarity=0.388 Sum_probs=183.3
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc----------HHHHH-HHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD----------VSSEI-NILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~----------~~~E~-~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|+| |.||++.. +++.+|+|+++.. +..|. .+++.++||||+++++++.+.+..++||
T Consensus 3 lg~G~~-------g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 75 (321)
T cd05603 3 IGKGSF-------GKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVL 75 (321)
T ss_pred eeeCCC-------EEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEE
Confidence 789999 99999998 4778999998531 23344 3578899999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 76 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 147 (321)
T cd05603 76 DYVNGGELFFHLQRE-----RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGV 147 (321)
T ss_pred cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCC
Confidence 999999999998653 35888999999999999999999999 9999999999999999999999999987532
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .......||..|+|||.+.+..++.++|||||||++|||++|+.||.+.+... ... ...
T Consensus 148 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~---~i~---- 209 (321)
T cd05603 148 EPE--------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ---MYD---NIL---- 209 (321)
T ss_pred CCC--------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH---HHH---HHh----
Confidence 211 11234578999999999999999999999999999999999999998654211 100 010
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 637 (669)
... ...+......+.+++.+||+.||.+||+..
T Consensus 210 ---------~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 210 ---------HKP--LQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred ---------cCC--CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 000 122333455789999999999999999764
No 175
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.3e-35 Score=317.90 Aligned_cols=243 Identities=23% Similarity=0.360 Sum_probs=190.8
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|+| |.||++.. .|+.||||+++. .+.+|+++|++++||||+++++++.+++..++|||
T Consensus 9 lG~G~~-------g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 9 IGRGAF-------GEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred EEecCC-------EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 899999 99999998 478899999863 24579999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 82 YLPGGDMMTLLMKK-----DTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCcHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999754 35899999999999999999999999 99999999999999999999999999976532
Q ss_pred CccccCCc------------------------------ccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHH
Q 005923 515 DEHEQGGY------------------------------GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELL 564 (669)
Q Consensus 515 ~~~~~~~~------------------------------~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ell 564 (669)
........ .........||+.|+|||++.+..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 21100000 000111246999999999999999999999999999999999
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC---HHHHHH
Q 005923 565 SGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS---ISEVFV 641 (669)
Q Consensus 565 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt---~~evl~ 641 (669)
+|..||.+....+. ...... . ...+..+........+.+++.+|+. +|.+|++ +.|++.
T Consensus 234 ~G~~Pf~~~~~~~~------~~~i~~----------~-~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 234 VGYPPFCSDNPQET------YRKIIN----------W-KETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred cCCCCCCCCCHHHH------HHHHHc----------C-CCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 99999986543211 111110 0 0011111111234568899999996 9999998 888876
Q ss_pred H
Q 005923 642 T 642 (669)
Q Consensus 642 ~ 642 (669)
+
T Consensus 296 h 296 (364)
T cd05599 296 H 296 (364)
T ss_pred C
Confidence 4
No 176
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.6e-35 Score=318.21 Aligned_cols=243 Identities=21% Similarity=0.304 Sum_probs=192.4
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
.|++.+ .+|.|+| |.||++... ++.+|+|.++. .+..|+.+++.++||||+++++++.++
T Consensus 44 ~y~~~~-~lg~G~~-------g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~ 115 (370)
T cd05596 44 DFDVIK-VIGRGAF-------GEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD 115 (370)
T ss_pred HcEEEE-EEeeCCC-------EEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 344444 3899999 999999874 77899999853 255799999999999999999999999
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
+..++||||+++|+|.+++++. .+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~------~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~Df 186 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNY------DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADF 186 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEec
Confidence 9999999999999999999753 3788889999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG----VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~ 582 (669)
|+++....... .......||+.|+|||.+.+. .++.++|||||||++|||++|+.||.+..... .
T Consensus 187 G~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~---~- 255 (370)
T cd05596 187 GTCMKMDANGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG---T- 255 (370)
T ss_pred cceeeccCCCc-------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH---H-
Confidence 99986543221 112235789999999998653 47899999999999999999999998654321 0
Q ss_pred HHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 005923 583 ASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNA--RPSISEVFVT 642 (669)
Q Consensus 583 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~ 642 (669)
...+... . ..+..+.....+..+.+++.+||+.+|.+ ||++.|++.+
T Consensus 256 --~~~i~~~------~-----~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 256 --YSKIMDH------K-----NSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred --HHHHHcC------C-----CcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 1111110 0 00111111134567899999999999987 9999999765
No 177
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-35 Score=311.60 Aligned_cols=242 Identities=24% Similarity=0.399 Sum_probs=205.1
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
.|.+-+ ++|+|.| |.++..+. ++..+++|.+.- ...+|+.++++++|||||.+.+.+.+++
T Consensus 5 ~Ye~~~-~iG~Gaf-------G~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~ 76 (426)
T KOG0589|consen 5 NYEVLR-QVGRGAF-------GSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG 76 (426)
T ss_pred hhhhhh-hcCcccc-------chhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC
Confidence 345545 4999999 87765554 577899998852 4578999999999999999999999999
Q ss_pred c-eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 428 N-TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 428 ~-~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
. .++||+|++||+|.+.+.+.+ ...+.++++..|+.|++.|++|||++. |+|||||+.|||++.+..+||+||
T Consensus 77 ~~l~Ivm~Y~eGg~l~~~i~~~k---~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDf 150 (426)
T KOG0589|consen 77 QLLCIVMEYCEGGDLAQLIKEQK---GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDF 150 (426)
T ss_pred ceEEEEEeecCCCCHHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecch
Confidence 8 899999999999999998764 456899999999999999999999988 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
|+|+.+.... ......+||+.||+||.+.+..|..|+|+|||||++|||++-+.+|.+.+-. .+...
T Consensus 151 GlaK~l~~~~--------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~---~Li~k-- 217 (426)
T KOG0589|consen 151 GLAKILNPED--------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS---ELILK-- 217 (426)
T ss_pred hhhhhcCCch--------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH---HHHHH--
Confidence 9999987653 2345689999999999999999999999999999999999999999865421 11111
Q ss_pred HHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 587 RVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 587 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. .+. ...+.|.....++..|+..|++.+|..||++.+++..
T Consensus 218 -i---------~~~-----~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 218 -I---------NRG-----LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -H---------hhc-----cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1 111 1234566677789999999999999999999999976
No 178
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.3e-34 Score=332.89 Aligned_cols=268 Identities=21% Similarity=0.308 Sum_probs=206.9
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
|.+.+ ++|.|+| |.||+|.. .|+.||+|+++. ++.+|++++++++||||+++++++.+++
T Consensus 4 YeIi~-~LGkGgf-------G~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~ 75 (932)
T PRK13184 4 YDIIR-LIGKGGM-------GEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD 75 (932)
T ss_pred eEEEE-EEecCCC-------EEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC
Confidence 44434 3899999 99999987 478999999853 3668999999999999999999999999
Q ss_pred ceeEEEEecCCCCHHHHHhcCCC------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcE
Q 005923 428 NTYLVYEFADNGALSDWLHSNRY------QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA 501 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~------~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~ 501 (669)
..++||||+++|+|.+++..... .....+++..+++++.||+.||+|||+.+ |+||||||+|||++.++.+
T Consensus 76 ~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~v 152 (932)
T PRK13184 76 PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEV 152 (932)
T ss_pred EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCE
Confidence 99999999999999999975311 11234678889999999999999999998 9999999999999999999
Q ss_pred EEcccCCccccCCCccccCC----------cccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCC
Q 005923 502 KITNFGLARSAESDEHEQGG----------YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571 (669)
Q Consensus 502 kl~DfGla~~~~~~~~~~~~----------~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~ 571 (669)
||+|||+++........... ..........||..|+|||.+.+..++.++|||||||++|||++|+.||.
T Consensus 153 KLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~ 232 (932)
T PRK13184 153 VILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR 232 (932)
T ss_pred EEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 99999999876321110000 00011223579999999999999999999999999999999999999997
Q ss_pred CCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhhcCC
Q 005923 572 GDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-SISEVFVTLSKIWSSS 650 (669)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-t~~evl~~L~~i~~~~ 650 (669)
......... ... ..++.- .....+.+..+.+++.+||+.||.+|| +++++.+.|+...+..
T Consensus 233 ~~~~~ki~~--------------~~~---i~~P~~-~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~ 294 (932)
T PRK13184 233 RKKGRKISY--------------RDV---ILSPIE-VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGS 294 (932)
T ss_pred Ccchhhhhh--------------hhh---ccChhh-ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcC
Confidence 643211000 000 011100 000123456688999999999999995 7888999999998888
Q ss_pred CCCCCC
Q 005923 651 SDWDPS 656 (669)
Q Consensus 651 ~~~~~~ 656 (669)
.+|.+.
T Consensus 295 p~w~~~ 300 (932)
T PRK13184 295 PEWTVK 300 (932)
T ss_pred cccccc
Confidence 888764
No 179
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.3e-34 Score=295.95 Aligned_cols=240 Identities=29% Similarity=0.493 Sum_probs=193.9
Q ss_pred HHhCCCCcccceeeEEEEEEEC---CC--eeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK---GD--DAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~---g~--~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|+| |.||+|.+. +. .+|+|.++. ++.+|+.++++++|+||+++++++.. ...++||
T Consensus 3 ig~g~~-------~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~ 74 (257)
T cd05040 3 LGDGSF-------GVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVT 74 (257)
T ss_pred CCccCc-------ccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEE
Confidence 688999 999999873 22 589999864 35679999999999999999999987 8899999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++.+.. . ..++|..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.+||+|||+++...
T Consensus 75 e~~~~~~L~~~l~~~~--~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~ 148 (257)
T cd05040 75 ELAPLGSLLDRLRKDA--L-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALP 148 (257)
T ss_pred EecCCCcHHHHHHhcc--c-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEecccccccccc
Confidence 9999999999998652 1 46899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEES 592 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (669)
..... ........++..|+|||++.+..++.++||||||+++|||++ |+.|+......+ ....+.
T Consensus 149 ~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~------ 214 (257)
T cd05040 149 QNEDH-----YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ---ILKKID------ 214 (257)
T ss_pred ccccc-----eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH------
Confidence 43211 111223457788999999999999999999999999999999 999987543221 111110
Q ss_pred hHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 593 NVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 593 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
. .......+...+..+.+++.+||+.+|.+||++.|+++.|.
T Consensus 215 -------~---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 215 -------K---EGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -------h---cCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0 00111223345567899999999999999999999999885
No 180
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=6.8e-35 Score=309.67 Aligned_cols=233 Identities=22% Similarity=0.345 Sum_probs=186.1
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc----------HHHHHHHHHhc-CCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD----------VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~----------~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|+| |.||++.. ++..+|+|+++.+ +..|+.++.++ +||||+++++++...+..++||
T Consensus 3 lG~G~~-------g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 3 IGRGSY-------AKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred eeeCCC-------eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEE
Confidence 789999 99999987 4678999999642 45788888888 6999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... +.+++..+..++.||+.||+|||+++ ++||||||+|||+++++.+||+|||+++...
T Consensus 76 e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~ 147 (327)
T cd05617 76 EYVNGGDLMFHMQRQ-----RKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGL 147 (327)
T ss_pred eCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceecc
Confidence 999999999998654 35999999999999999999999999 9999999999999999999999999987532
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .......||..|+|||++.+..++.++|||||||++|||++|+.||..............+...
T Consensus 148 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~----- 214 (327)
T cd05617 148 GPG--------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQV----- 214 (327)
T ss_pred CCC--------CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHH-----
Confidence 211 1123457899999999999999999999999999999999999999642211100000011000
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 636 (669)
+.... ...|...+..+.+++.+||+.||.+|+++
T Consensus 215 -------~~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 215 -------ILEKP--IRIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred -------HHhCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 01111 12344455678999999999999999984
No 181
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.3e-35 Score=309.51 Aligned_cols=226 Identities=26% Similarity=0.412 Sum_probs=185.1
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHhcCCC-CceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKKINHS-NIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lV~ 433 (669)
+|+|+| |.||+|..+ ++.+|+|+++.+ +..|.+++..++|+ +|+++.+++...+..++||
T Consensus 8 lg~G~~-------g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 8 LGKGSF-------GKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred EeeccC-------eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 899999 999999985 568999998632 44688888888765 6888999998889999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05587 81 EYVNGGDLMYHIQQV-----GKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENI 152 (324)
T ss_pred cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecC
Confidence 999999999999754 35899999999999999999999999 9999999999999999999999999987532
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .......||..|+|||++.+..++.++|||||||++|||++|+.||.+....+ .... .
T Consensus 153 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~~---i----- 213 (324)
T cd05587 153 FGG--------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---LFQS---I----- 213 (324)
T ss_pred CCC--------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHHH---H-----
Confidence 211 12334578999999999999999999999999999999999999998654321 1111 0
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 636 (669)
... ...++......+.+++.+||+.||.+|++.
T Consensus 214 --------~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 214 --------MEH--NVSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred --------HcC--CCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 000 122344455678999999999999999986
No 182
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.7e-35 Score=314.65 Aligned_cols=238 Identities=24% Similarity=0.345 Sum_probs=191.8
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.+|.|.| |.||++.. +|+.+|+|+++. .+.+|+.+++.++|+||+++++++.+++..++||
T Consensus 8 ~lg~G~~-------g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 8 LVGRGHF-------GEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred EEEeccC-------EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3899999 99999987 478899999864 2567899999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++.+.+ ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 153 (330)
T cd05601 81 EYQPGGDLLSLLNRYE----DQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLT 153 (330)
T ss_pred CCCCCCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECC
Confidence 9999999999997642 45899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCccccCCcccceeeecccccccccccccc------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIE------NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~------~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
.... .......||..|+|||++. ...++.++|||||||++|||++|+.||........ ...
T Consensus 154 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~------~~~ 220 (330)
T cd05601 154 ANKM-------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT------YNN 220 (330)
T ss_pred CCCc-------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH------HHH
Confidence 3321 1223357899999999987 46678999999999999999999999986543211 111
Q ss_pred HHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 588 VLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 588 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
++.. ... +..+.....+..+.+|+.+||+ ||.+||++.+++.+
T Consensus 221 i~~~-------~~~----~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 221 IMNF-------QRF----LKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred HHcC-------CCc----cCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 1110 000 1111112345668899999998 99999999999864
No 183
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=6.3e-35 Score=316.56 Aligned_cols=245 Identities=22% Similarity=0.351 Sum_probs=189.8
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
++|.|+| |.||+|.. .+..+|+|+++. .+..|++++++++|+||+++++++.+++..++||
T Consensus 8 ~LG~G~~-------g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 8 TLGIGAF-------GEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred EEeecCC-------EEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 3899999 99999988 467899999853 2567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++.+. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~ 152 (381)
T cd05626 81 DYIPGGDMMSLLIRM-----EVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFR 152 (381)
T ss_pred ecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccc
Confidence 999999999999754 35889999999999999999999999 9999999999999999999999999986432
Q ss_pred CCccccC---------------------------------------CcccceeeecccccccccccccccCCCCchhhHH
Q 005923 514 SDEHEQG---------------------------------------GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554 (669)
Q Consensus 514 ~~~~~~~---------------------------------------~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~ 554 (669)
....... ...........||..|+|||.+.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Diw 232 (381)
T cd05626 153 WTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWW 232 (381)
T ss_pred cccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCcccee
Confidence 1100000 0000011235799999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHH--hcccCCCC
Q 005923 555 AFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKN--CTAHDLNA 632 (669)
Q Consensus 555 S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~--Cl~~dP~~ 632 (669)
||||++|||++|+.||......+... .... . ...+..+.......++.+++.+ |+..++..
T Consensus 233 SlG~il~elltG~~Pf~~~~~~~~~~------~i~~----------~-~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~ 295 (381)
T cd05626 233 SVGVILFEMLVGQPPFLAPTPTETQL------KVIN----------W-ENTLHIPPQVKLSPEAVDLITKLCCSAEERLG 295 (381)
T ss_pred ehhhHHHHHHhCCCCCcCCCHHHHHH------HHHc----------c-ccccCCCCCCCCCHHHHHHHHHHccCcccccC
Confidence 99999999999999998654321110 0000 0 0011111112344567888887 55667777
Q ss_pred CCCHHHHHHH
Q 005923 633 RPSISEVFVT 642 (669)
Q Consensus 633 RPt~~evl~~ 642 (669)
||++.|++.+
T Consensus 296 R~~~~~~l~h 305 (381)
T cd05626 296 RNGADDIKAH 305 (381)
T ss_pred CCCHHHHhcC
Confidence 9999999875
No 184
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.7e-34 Score=296.04 Aligned_cols=245 Identities=27% Similarity=0.504 Sum_probs=196.0
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC-CCeeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
|++.+ ++|.|+| |.||++..+ +..+++|.++. .+.+|++++++++|+||+++.+++.+ ...+++
T Consensus 8 ~~~~~-~lg~g~~-------~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05073 8 LKLEK-KLGAGQF-------GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 78 (260)
T ss_pred eeEEe-EecCccc-------eEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEE
Confidence 34444 4899999 999999874 56789998753 46689999999999999999999877 778999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++|+|.+++... ....+++..++.++.|++.||+|||+.+ ++||||+|+||+++.++.+||+|||+++..
T Consensus 79 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 152 (260)
T cd05073 79 TEFMAKGSLLDFLKSD---EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI 152 (260)
T ss_pred EEeCCCCcHHHHHHhC---CccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeec
Confidence 9999999999999764 2346899999999999999999999998 999999999999999999999999999865
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... .......++..|+|||++....++.++|+||||++++|+++ |+.||.+...... ... ..
T Consensus 153 ~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~---~~~----~~- 217 (260)
T cd05073 153 EDNEY-------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV---IRA----LE- 217 (260)
T ss_pred cCCCc-------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH---HHH----Hh-
Confidence 43221 11122345678999999999999999999999999999999 8888876443211 000 00
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
.....+.+...+.++.+++.+||+.+|.+||++.++++.|+.+
T Consensus 218 ------------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 218 ------------RGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred ------------CCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 0111122234456789999999999999999999999999753
No 185
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-36 Score=284.45 Aligned_cols=262 Identities=24% Similarity=0.326 Sum_probs=202.6
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecC-
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEG- 427 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~- 427 (669)
.+|.+.+. +|+|+| ..||.++. +++.+|+|++.- ...+|++..++++||||+++++++..+.
T Consensus 21 ~Ryri~~~-LgeGGf-------sfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~ 92 (302)
T KOG2345|consen 21 KRYRIQRL-LGEGGF-------SFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEK 92 (302)
T ss_pred ceEEEeee-ecCCCc-------eeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhc
Confidence 46777774 999999 88988874 688899998842 3568999999999999999999987544
Q ss_pred ----ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEE
Q 005923 428 ----NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKI 503 (669)
Q Consensus 428 ----~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl 503 (669)
..||+++|...|+|.+.+...+ ..+..+++.++++|+.+|++||++||+.. ||++||||||.|||+.+.+.+++
T Consensus 93 D~~~~~yll~Pyy~~Gsl~d~i~~~k-~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl 170 (302)
T KOG2345|consen 93 DGKHEAYLLLPYYKRGSLLDEIERLK-IKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVL 170 (302)
T ss_pred cCceeEEEEeehhccccHHHHHHHHh-hcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEE
Confidence 4899999999999999998764 34457999999999999999999999986 78999999999999999999999
Q ss_pred cccCCccccCCCccccCC-cccceeeecccccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHH
Q 005923 504 TNFGLARSAESDEHEQGG-YGLQLTRHVVGTYGYMAPEYIE---NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579 (669)
Q Consensus 504 ~DfGla~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~l~---~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~ 579 (669)
.|||.+....-....+.. ...+--.....|.-|+|||.+. +...++++|||||||+||+|+.|..||...-...
T Consensus 171 ~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G-- 248 (302)
T KOG2345|consen 171 MDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG-- 248 (302)
T ss_pred EeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC--
Confidence 999999865432111100 0011112235788999999985 5678999999999999999999999996311000
Q ss_pred HHHHHHHHHHhhhhHHhhhh-cccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 580 LLYASISRVLEESNVREKLR-GFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~l~-~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
+.+. ......+.-+.....+..+.+++++|++.||.+||+..|++..++.+.
T Consensus 249 ----------------gSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 249 ----------------GSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ----------------CeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1111 111222222222235667899999999999999999999999998764
No 186
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=8.6e-35 Score=313.46 Aligned_cols=245 Identities=23% Similarity=0.360 Sum_probs=187.6
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.+|.|.| |.||++.. .++.+|+|+++. .+..|+.++.+++|+||+++++.+.++...++||
T Consensus 8 ~LG~G~~-------g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 8 VIGRGAF-------GEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred EEEeCCC-------EEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 3899999 99999987 478899999863 2557999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++.+. +.+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 81 EFLPGGDMMTLLMKK-----DTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred cCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence 999999999999754 45899999999999999999999999 9999999999999999999999999998653
Q ss_pred CCcccc---C------------------------CcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcC
Q 005923 514 SDEHEQ---G------------------------GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566 (669)
Q Consensus 514 ~~~~~~---~------------------------~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg 566 (669)
...... . ...........||..|+|||.+.+..++.++|||||||++|||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G 232 (363)
T cd05628 153 KAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (363)
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC
Confidence 211000 0 0000111235799999999999999999999999999999999999
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcc--cCCCCCCCHHHHHHH
Q 005923 567 REAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTA--HDLNARPSISEVFVT 642 (669)
Q Consensus 567 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~--~dP~~RPt~~evl~~ 642 (669)
+.||.+....+. ... +... ...+..+ .. .....++.+++.+++. .++..||+++||+++
T Consensus 233 ~~Pf~~~~~~~~---~~~---i~~~------~~~~~~p---~~--~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 233 YPPFCSETPQET---YKK---VMNW------KETLIFP---PE--VPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCCCCHHHH---HHH---HHcC------cCcccCC---Cc--CCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 999986543211 111 1100 0000001 11 1123456777777443 344567999999876
No 187
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.9e-34 Score=297.46 Aligned_cols=250 Identities=28% Similarity=0.487 Sum_probs=197.9
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CC----eeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GD----DAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~----~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
|++.+ .+|.|+| |.||+|... |. .+|+|.++. ++.+|+.++++++|+||++++++|..
T Consensus 9 ~~~~~-~ig~g~~-------g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (279)
T cd05057 9 LEKIK-VLGSGAF-------GTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS 80 (279)
T ss_pred cEEcc-eecCCCC-------ccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 33333 4899999 999999873 32 488998753 35679999999999999999999976
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcc
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 505 (669)
...++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|
T Consensus 81 -~~~~~v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~d 152 (279)
T cd05057 81 -SQVQLITQLMPLGCLLDYVRNHK----DNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITD 152 (279)
T ss_pred -CceEEEEecCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECC
Confidence 78899999999999999997642 35899999999999999999999988 99999999999999999999999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 584 (669)
||+++........ .......++..|+|||.+....++.++|+||||+++||+++ |+.||.+....+
T Consensus 153 fg~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~------- 219 (279)
T cd05057 153 FGLAKLLDVDEKE------YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE------- 219 (279)
T ss_pred CcccccccCcccc------eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH-------
Confidence 9999876532210 00111223568999999998999999999999999999999 999987643211
Q ss_pred HHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCC
Q 005923 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSS 651 (669)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 651 (669)
+...+. .......+..+...+.+++.+||..||.+||++.++++.|.++.....
T Consensus 220 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05057 220 IPDLLE-------------KGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQ 273 (279)
T ss_pred HHHHHh-------------CCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence 000110 011112233344568899999999999999999999999999876543
No 188
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-34 Score=300.67 Aligned_cols=235 Identities=23% Similarity=0.436 Sum_probs=193.1
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
++|.|.| |.||+|.. ++..+++|.+.. .+.+|+.++++++|+||+++++.+..+...++||||+
T Consensus 27 ~lg~g~~-------~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 27 KIGQGAS-------GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred EecCCCC-------eEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 3899999 99999986 578899998853 3667999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
++++|.+++... .+++.++..++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 100 ~~~~L~~~~~~~------~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 100 AGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred CCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 999999999643 4889999999999999999999999 9999999999999999999999999988654322
Q ss_pred cccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHh
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVRE 596 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (669)
. ......++..|+|||.+.+..++.++|||||||++|||++|+.||....... .... .
T Consensus 171 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~--~~~~----~-------- 228 (296)
T cd06654 171 S--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALYL----I-------- 228 (296)
T ss_pred c--------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH--hHHH----H--------
Confidence 1 1123467889999999999999999999999999999999999997654311 0000 0
Q ss_pred hhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 597 KLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 597 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. .........+......+.+++.+||..||.+||++.|++..
T Consensus 229 -~---~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 229 -A---TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred -h---cCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0 00111112234455678999999999999999999999974
No 189
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.3e-34 Score=303.90 Aligned_cols=198 Identities=27% Similarity=0.485 Sum_probs=161.8
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC----CCeeEEEEecc-----cHHHHHHHHHhcCCCCceeEeeEEEe--cCc
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK----GDDAAVKVMKG-----DVSSEINILKKINHSNIIRLSGFCVH--EGN 428 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~----g~~vavK~~~~-----~~~~E~~~l~~l~H~niv~l~g~~~~--~~~ 428 (669)
|+++..++|.|.| |.||+|... +..+|+|.++. .+.+|+.+|++++||||+++++++.. +..
T Consensus 2 ~~~~~~~lG~G~~-------g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 74 (317)
T cd07868 2 FEYEGCKVGRGTY-------GHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRK 74 (317)
T ss_pred ccccccccccCCC-------eEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcE
Confidence 5566668999999 999999863 46799998864 46789999999999999999999864 346
Q ss_pred eeEEEEecCCCCHHHHHhcCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeee----cCCCc
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQ----TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL----DTNLR 500 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl----~~~~~ 500 (669)
.++||||+. ++|.+++...+.. ....+++..+..++.||+.||+|||+++ |+||||||+|||+ +.++.
T Consensus 75 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~ 150 (317)
T cd07868 75 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGR 150 (317)
T ss_pred EEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCc
Confidence 789999996 4898888643211 1235899999999999999999999999 9999999999999 45678
Q ss_pred EEEcccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 005923 501 AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGD 573 (669)
Q Consensus 501 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~ 573 (669)
+||+|||+++........ ........||..|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 151 ~kl~DfG~a~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 151 VKIADMGFARLFNSPLKP-----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred EEEeecCceeccCCCCcc-----ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 999999999876432211 112234578999999999977 45899999999999999999999999743
No 190
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-34 Score=296.25 Aligned_cols=245 Identities=25% Similarity=0.416 Sum_probs=192.9
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
.|++.. ++|.|.| |.||+|.. +++.+|+|+.+. .+.+|+.++++++||||+++++++..++..
T Consensus 10 ~y~~~~-~lg~g~~-------g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~ 81 (267)
T cd06646 10 DYELIQ-RVGSGTY-------GDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKL 81 (267)
T ss_pred hcchhh-eeecCCC-------eEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Confidence 344444 4899999 99999997 577899998853 256799999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+++|+|.++++.. ..+++.++..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++
T Consensus 82 ~iv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~ 153 (267)
T cd06646 82 WICMEYCGGGSLQDIYHVT-----GPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVA 153 (267)
T ss_pred EEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccc
Confidence 9999999999999999753 35899999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE---NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
+....... ......++..|+|||.+. ...++.++||||||+++|||++|+.|+......+...
T Consensus 154 ~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~------ 219 (267)
T cd06646 154 AKITATIA--------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF------ 219 (267)
T ss_pred eeeccccc--------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe------
Confidence 86643211 112346788999999984 4557889999999999999999999986433211000
Q ss_pred HHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 587 RVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 587 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
.. ....+..+... .....+..+.+++.+||+.||.+||+++++++.|
T Consensus 220 -~~-------~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 220 -LM-------SKSNFQPPKLK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -ee-------ecCCCCCCCCc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00 00001111111 1123456789999999999999999999998754
No 191
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.4e-34 Score=295.44 Aligned_cols=236 Identities=24% Similarity=0.366 Sum_probs=193.3
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
++|.|.| |.||++.. .+..+++|.++. ++..|+.++++++|+||+++++.+..++..++||||
T Consensus 7 ~lg~g~~-------g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 7 VVGEGSF-------GRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred EeeccCC-------eEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 3899999 99999987 478899998742 356799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+++|+|.+++...+ ...+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.++++|||+++.....
T Consensus 80 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 80 CDGGDLMQKIKLQR---GKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred CCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 99999999987532 345889999999999999999999999 999999999999999999999999999866432
Q ss_pred ccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (669)
.. ......++..|+|||.+.+..++.++|+||||+++|+|++|+.||........ ......
T Consensus 154 ~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~------~~~~~~----- 214 (255)
T cd08219 154 GA--------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL------ILKVCQ----- 214 (255)
T ss_pred cc--------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH------HHHHhc-----
Confidence 21 12234688899999999999999999999999999999999999976432110 000000
Q ss_pred hhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 596 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
......+...+..+.+++.+||+.||.+||++.|++..
T Consensus 215 ---------~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 215 ---------GSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---------CCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00112233455678999999999999999999999864
No 192
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.9e-34 Score=303.57 Aligned_cols=252 Identities=21% Similarity=0.340 Sum_probs=192.2
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
++|.|+| |.||++... +..+|+|.++. ++.+|++++++++||||++++++|..++..++||||
T Consensus 8 ~lg~G~~-------g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 8 ELGAGNG-------GVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred eccCCCC-------eEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 3899999 999999874 67788888753 366899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~-~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
+++|+|.+++++. ..+++..+..++.|++.||.|||+ .+ ++||||||+|||+++++.+||+|||+++....
T Consensus 81 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (308)
T cd06615 81 MDGGSLDQVLKKA-----GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 152 (308)
T ss_pred cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCcccccc
Confidence 9999999999754 458999999999999999999997 46 99999999999999999999999999876532
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhh--
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEES-- 592 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 592 (669)
.. .....++..|+|||.+.+..++.++||||||+++|||++|+.||......................
T Consensus 153 ~~----------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (308)
T cd06615 153 SM----------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKES 222 (308)
T ss_pred cc----------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCC
Confidence 21 223468899999999998889999999999999999999999987543211110000000000000
Q ss_pred ---------------hHHhhhhcccCCccCCCCc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 593 ---------------NVREKLRGFIDPSLRNEYP-LDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 593 ---------------~~~~~l~~~~d~~l~~~~~-~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
...+..+..+... ....| ......+.+++.+||+.||.+|||+.||+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 223 HRPVSGHPPDSPRPMAIFELLDYIVNEP-PPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred cccccCCCCCccchhhHHHHHHHHhcCC-CccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000000111000 00111 12445689999999999999999999999874
No 193
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1e-34 Score=300.93 Aligned_cols=258 Identities=24% Similarity=0.446 Sum_probs=198.6
Q ss_pred HHHhCCCCcccceeeEEEEEEEC------CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEe--cCce
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK------GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVH--EGNT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~------g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~ 429 (669)
.+|.|.| |.||++.++ +..+|||.++. ++.+|++++++++|+||+++++++.. +...
T Consensus 11 ~ig~g~~-------~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 11 QLGEGHF-------GKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred eeccCCC-------eeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 4899999 999999874 56899998852 36789999999999999999999877 5578
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+++++|.+++...+ ..+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR----DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc----cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccc
Confidence 99999999999999997642 35999999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 589 (669)
......... ........++..|++||.+.+..++.++||||||+++|||++|+.|+............. .
T Consensus 157 ~~~~~~~~~-----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~-----~ 226 (284)
T cd05038 157 KVLPEDKDY-----YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI-----A 226 (284)
T ss_pred cccccCCcc-----eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccc-----c
Confidence 877532210 111122345567999999999999999999999999999999999886432211000000 0
Q ss_pred hhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 590 EESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 590 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
........+...+....+...+..++.++.+++.+||+.+|.+|||+.||+++|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 227 QGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred cccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 0000011111111122222334455578999999999999999999999999999863
No 194
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=8.6e-35 Score=308.33 Aligned_cols=226 Identities=26% Similarity=0.409 Sum_probs=185.3
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHhc-CCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|+| |.||++... +..+|+|.++.+ +..|..++..+ +|++|+++.+++...+..++||
T Consensus 8 lg~G~~-------g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 8 LGKGSF-------GKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred EeeCCC-------eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 899999 999999885 568999998642 34567777776 5899999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~ 152 (323)
T cd05616 81 EYVNGGDLMYQIQQV-----GRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENM 152 (323)
T ss_pred cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence 999999999999754 35899999999999999999999999 9999999999999999999999999997543
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .......||..|+|||++.+..++.++|||||||++|||++|+.||.+....+ .... +
T Consensus 153 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~---~~~~---i----- 213 (323)
T cd05616 153 WDG--------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LFQS---I----- 213 (323)
T ss_pred CCC--------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH---HHHH---H-----
Confidence 221 11234578999999999999999999999999999999999999998654321 1111 1
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 636 (669)
.+.. ..+|.....++.+++.+||+.||.+|++.
T Consensus 214 --------~~~~--~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 214 --------MEHN--VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred --------HhCC--CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1111 12344456678999999999999999985
No 195
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.3e-34 Score=297.90 Aligned_cols=238 Identities=24% Similarity=0.400 Sum_probs=194.2
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
|+..+ .++.|.| |.||+|.. .+..+|+|..+. ++.+|++++++++||||+++++++..+...
T Consensus 6 y~~~~-~l~~g~~-------~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 77 (277)
T cd06642 6 FTKLE-RIGKGSF-------GEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKL 77 (277)
T ss_pred HHHHH-HhcCCCC-------eeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCce
Confidence 44444 3899999 99999987 467899998752 367899999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+++++|.+++.. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++
T Consensus 78 ~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~ 148 (277)
T cd06642 78 WIIMEYLGGGSALDLLKP------GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred EEEEEccCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEcccccc
Confidence 999999999999999864 35899999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 589 (669)
+....... ......++..|+|||.+.+..++.++||||||+++|||++|+.|+......... .
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~------ 211 (277)
T cd06642 149 GQLTDTQI--------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL---F------ 211 (277)
T ss_pred ccccCcch--------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH---h------
Confidence 86643221 112245788999999999999999999999999999999999998643321100 0
Q ss_pred hhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 590 EESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 590 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. +........+...+..+.+++.+||+.+|.+||++.|++.+
T Consensus 212 -------~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 212 -------L----IPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred -------h----hhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0 01111112233455678999999999999999999999984
No 196
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.7e-34 Score=296.15 Aligned_cols=242 Identities=24% Similarity=0.461 Sum_probs=190.7
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc------cHHHHHHHHHhc-CCCCceeEeeEEEec---
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG------DVSSEINILKKI-NHSNIIRLSGFCVHE--- 426 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~------~~~~E~~~l~~l-~H~niv~l~g~~~~~--- 426 (669)
.|++.+ .+|.|.| |.||+|.. .++.+|+|.++. ++..|+.+++++ +|+||+++++++...
T Consensus 7 ~y~~~~-~lg~g~~-------g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 7 IFELVE-LVGNGTY-------GQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred hhhHHH-heeecCC-------eEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 355554 4899999 99999988 467899999853 467899999998 799999999998753
Q ss_pred ---CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEE
Q 005923 427 ---GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKI 503 (669)
Q Consensus 427 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl 503 (669)
...++||||+++|+|.+++...+ ...++|..+..++.|++.||+|||+.+ ++||||||+||++++++.+||
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l 152 (272)
T cd06637 79 GMDDQLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKL 152 (272)
T ss_pred CCCcEEEEEEEcCCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEE
Confidence 35799999999999999997642 346899999999999999999999998 999999999999999999999
Q ss_pred cccCCccccCCCccccCCcccceeeecccccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHH
Q 005923 504 TNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE-----NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA 578 (669)
Q Consensus 504 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~ 578 (669)
+|||+++...... .......|+..|+|||++. +..++.++|||||||++|||++|+.||........
T Consensus 153 ~Dfg~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~ 224 (272)
T cd06637 153 VDFGVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA 224 (272)
T ss_pred ccCCCceeccccc--------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH
Confidence 9999998654321 1123356888999999986 34688899999999999999999999864332111
Q ss_pred HHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.. .. .....+ ...+..++..+.+++.+||..||.+|||+.|+++
T Consensus 225 ~~------~~----------~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 225 LF------LI----------PRNPAP---RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HH------HH----------hcCCCC---CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00 00 000001 1112234457899999999999999999999975
No 197
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-34 Score=313.50 Aligned_cols=259 Identities=24% Similarity=0.341 Sum_probs=196.7
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC----CCeeEEEEecc--cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK----GDDAAVKVMKG--DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~----g~~vavK~~~~--~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
|.+.. .+|.|.| |.||++... +..|++|.+.. ...+|+++|++++||||+++++++..+...++||
T Consensus 94 y~i~~-~Lg~G~~-------g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 94 YNILS-SLTPGSE-------GEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred eEEEE-eecCCCC-------eEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 44444 4899999 999999764 45689998864 4678999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
|++. ++|.+++... ..+++..++.|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 166 e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 166 PKYK-CDLFTYVDRS-----GPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred hhcC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 9996 6899998432 46999999999999999999999999 9999999999999999999999999998664
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
.... ........||..|+|||.+.+..++.++|||||||++|||++|+.||.+............+.+.+....
T Consensus 237 ~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~ 310 (392)
T PHA03207 237 AHPD------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHP 310 (392)
T ss_pred cccc------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCc
Confidence 4321 1122346799999999999999999999999999999999999999986543221111122222111100
Q ss_pred H----------HhhhhcccCCccCCCCc-------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 594 V----------REKLRGFIDPSLRNEYP-------LDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 594 ~----------~~~l~~~~d~~l~~~~~-------~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. ...+..+. ...+..++ ......+.+++++||+.||.+|||+.|++.+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 311 LEFPQNGSTNLCKHFKQYA-IVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cccCCccchhHHHHHHhhc-ccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 00011100 01111111 1234567899999999999999999999876
No 198
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.5e-34 Score=290.22 Aligned_cols=242 Identities=26% Similarity=0.472 Sum_probs=197.5
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc-----cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG-----DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~-----~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
.|++.+ .++.|.| |.||+|... +..+++|.++. ++.+|++++++++|+||+++++++..+...++
T Consensus 4 ~y~~~~-~i~~g~~-------~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l 75 (256)
T cd06612 4 VFDILE-KLGEGSY-------GSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWI 75 (256)
T ss_pred cchhhh-hhcCCCC-------eEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEE
Confidence 455555 4899999 999999985 67899999863 47789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
++||+++++|.+++... ...+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||++..
T Consensus 76 ~~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~ 148 (256)
T cd06612 76 VMEYCGAGSVSDIMKIT----NKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQ 148 (256)
T ss_pred EEecCCCCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchh
Confidence 99999999999999753 246899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
...... ......++..|+|||.+.+..++.++||||||+++|||++|+.|+..........
T Consensus 149 ~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~----------- 209 (256)
T cd06612 149 LTDTMA--------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF----------- 209 (256)
T ss_pred cccCcc--------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh-----------
Confidence 644321 1223457889999999999999999999999999999999999997543211000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.......+. ...+......+.+++.+||+.||.+|||+.||++
T Consensus 210 -----~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 210 -----MIPNKPPPT--LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred -----hhccCCCCC--CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 000000111 1223344567899999999999999999999985
No 199
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=5.7e-35 Score=309.98 Aligned_cols=230 Identities=27% Similarity=0.380 Sum_probs=184.7
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc----------HHHHHH-HHHhcCCCCceeEeeEEEecCceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD----------VSSEIN-ILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~----------~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
.+|.|+| |.||++.. +|+.+|+|+++.. +..|.. +++.++||||+++++++..++..++|
T Consensus 2 ~lG~G~~-------g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv 74 (325)
T cd05604 2 VIGKGSF-------GKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFV 74 (325)
T ss_pred ceeeCCC-------eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEE
Confidence 3789999 99999987 4789999998532 233443 46778999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++|+|.+++.+. ..+++..+..++.||+.||+|||+.+ ++||||||+|||+++++.+||+|||+++..
T Consensus 75 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 75 LDFVNGGELFFHLQRE-----RSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred EcCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 9999999999998754 45899999999999999999999999 999999999999999999999999998754
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEES 592 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (669)
.... .......||..|+|||.+.+..++.++|||||||++|||++|+.||......+. ......
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~------~~~~~~-- 210 (325)
T cd05604 147 IAQS--------DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM------YDNILH-- 210 (325)
T ss_pred CCCC--------CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH------HHHHHc--
Confidence 3211 112345789999999999999999999999999999999999999986543210 011110
Q ss_pred hHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 005923 593 NVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639 (669)
Q Consensus 593 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ev 639 (669)
. .+ ..+......+.+++.+|++.||.+||++.+.
T Consensus 211 -------~----~~--~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~ 244 (325)
T cd05604 211 -------K----PL--VLRPGASLTAWSILEELLEKDRQRRLGAKED 244 (325)
T ss_pred -------C----Cc--cCCCCCCHHHHHHHHHHhccCHHhcCCCCCC
Confidence 0 00 1111234567899999999999999988643
No 200
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.9e-34 Score=296.97 Aligned_cols=252 Identities=24% Similarity=0.386 Sum_probs=190.6
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
.+|.|.| |.||+|.. ++..+|+|.++. .+.+|+.++++++||||+++++++.+++..++|||
T Consensus 7 ~l~~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 7 KIGEGTY-------GVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred EecccCc-------eEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 3789999 99999988 478899998752 36789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|++ ++|.+++.... ....+++..+..++.|++.||+|||+.+ ++||||+|+|||+++++.+||+|||+++....
T Consensus 80 ~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 153 (285)
T cd07861 80 FLS-MDLKKYLDSLP--KGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGI 153 (285)
T ss_pred cCC-CCHHHHHhcCC--CCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCC
Confidence 997 69999987542 2356899999999999999999999998 99999999999999999999999999986543
Q ss_pred CccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH---h
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL---E 590 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~ 590 (669)
.. .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+...... ......... .
T Consensus 154 ~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~--~~~~~~~~~~~~~ 223 (285)
T cd07861 154 PV--------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ--LFRIFRILGTPTE 223 (285)
T ss_pred Cc--------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCCh
Confidence 21 11223456889999998865 4578999999999999999999999986543211 111100000 0
Q ss_pred h--------hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 591 E--------SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 591 ~--------~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
. .........+..... .........++.+++.+||+.||.+|||+.||+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 224 DVWPGVTSLPDYKNTFPKWKKGSL-RSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhhhcchhhHHHHhhccccCcchh-HHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 000000001111111 0111224567789999999999999999999985
No 201
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.1e-34 Score=293.94 Aligned_cols=239 Identities=26% Similarity=0.438 Sum_probs=193.2
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
.++.|.| |.||+|.. .++.+|+|.++. .+.+|++++++++||||+++++++.+++
T Consensus 7 ~ig~g~~-------~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 79 (267)
T cd06628 7 LIGSGSF-------GSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD 79 (267)
T ss_pred eeecCCC-------eEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Confidence 3788999 99999987 467899997742 3567999999999999999999999999
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
..++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg 151 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNY-----GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFG 151 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccC
Confidence 999999999999999999754 35889999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
+++........... ........|+..|+|||.+.+..++.++||||||+++|||++|+.||....... .+.
T Consensus 152 ~~~~~~~~~~~~~~--~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~- 222 (267)
T cd06628 152 ISKKLEANSLSTKT--NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ------AIF- 222 (267)
T ss_pred CCcccccccccCCc--cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH------HHH-
Confidence 99876532211000 011123457889999999999999999999999999999999999997643211 000
Q ss_pred HHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 588 VLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 588 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.+... .....+...+..+.+++.+||+.||.+||++.|+++
T Consensus 223 ---------~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 223 ---------KIGEN----ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ---------HHhcc----CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 00011 112233445667899999999999999999999986
No 202
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.9e-34 Score=300.49 Aligned_cols=244 Identities=28% Similarity=0.486 Sum_probs=193.5
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCC----eeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGD----DAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~----~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
.+|.|+| |.||+|.. .|. .+|+|.++. ++.+|+.++++++||||++++|+|.. ...++
T Consensus 14 ~lg~G~~-------g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~~ 85 (303)
T cd05110 14 VLGSGAF-------GTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQL 85 (303)
T ss_pred ccccCCC-------ccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-CCcee
Confidence 4899999 99999987 344 468887753 35679999999999999999999865 45789
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
++||+++|+|.+++... ...+++..++.++.|++.||+|||+++ ++||||||+|||+++++.+||+|||+++.
T Consensus 86 v~e~~~~g~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 86 VTQLMPHGCLLDYVHEH----KDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eehhcCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEcccccccc
Confidence 99999999999999754 235899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
....... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||.+....+. ...+.
T Consensus 159 ~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-------~~~~~ 225 (303)
T cd05110 159 LEGDEKE------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI-------PDLLE 225 (303)
T ss_pred ccCcccc------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-------HHHHH
Confidence 6432211 11122345678999999999999999999999999999997 8888875432111 11111
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCC
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSS 650 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 650 (669)
. ......+..++..+.+++.+||..+|++||+++|+++.|.++....
T Consensus 226 ~-------------~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 226 K-------------GERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred C-------------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 0 0011112234457899999999999999999999999999986553
No 203
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=7.3e-35 Score=314.52 Aligned_cols=242 Identities=21% Similarity=0.296 Sum_probs=190.2
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
|++.+ .+|.|+| |.||++... ++.+|+|.++. .+.+|+.+++.++||||+++++++..++
T Consensus 45 y~~~~-~lG~G~f-------g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 45 YDVVK-VIGRGAF-------GEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred CeEEE-EEEecCC-------eEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 44433 3899999 999999984 67899998853 2557999999999999999999999999
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
..++||||+++|+|.+++... .+++.++..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~------~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG 187 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNY------DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFG 187 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecc
Confidence 999999999999999999653 3788999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG----VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
+++....... .......||..|+|||.+.+. .++.++|||||||++|||++|+.||.+....+.
T Consensus 188 ~a~~~~~~~~-------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~----- 255 (370)
T cd05621 188 TCMKMDETGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT----- 255 (370)
T ss_pred cceecccCCc-------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH-----
Confidence 9987643221 112345799999999999764 378899999999999999999999986543211
Q ss_pred HHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 005923 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNA--RPSISEVFVT 642 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~ 642 (669)
...+... . ..+..+........+.+++.+|+..++.+ |+++.|++++
T Consensus 256 -~~~i~~~---------~--~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 256 -YSKIMDH---------K--NSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -HHHHHhC---------C--cccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 1111100 0 01111111234567889999999855543 8999999876
No 204
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=7.4e-35 Score=315.59 Aligned_cols=244 Identities=22% Similarity=0.332 Sum_probs=188.1
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
++|.|+| |.||++.. +++.+|||++.. .+.+|++++++++||||+++++++.+++..|+||
T Consensus 8 ~lG~G~~-------g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 8 VIGKGAF-------GEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred EEeecCC-------EEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3899999 99999987 578899998843 2567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~ 152 (377)
T cd05629 81 EFLPGGDLMTMLIKY-----DTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFH 152 (377)
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeecccccccc
Confidence 999999999999754 45889999999999999999999999 9999999999999999999999999997432
Q ss_pred CCcccc-------C-Ccc-------------------------------cceeeecccccccccccccccCCCCchhhHH
Q 005923 514 SDEHEQ-------G-GYG-------------------------------LQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554 (669)
Q Consensus 514 ~~~~~~-------~-~~~-------------------------------~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~ 554 (669)
...... . ... ........||..|+|||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 232 (377)
T cd05629 153 KQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWW 232 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeE
Confidence 110000 0 000 0001124699999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCC-
Q 005923 555 AFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNAR- 633 (669)
Q Consensus 555 S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R- 633 (669)
||||++|||++|+.||.+....+. ...+ .. +. ..+..+.......++.+++.+|+. +|.+|
T Consensus 233 SlGvil~elltG~~Pf~~~~~~~~---~~~i---~~----------~~-~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~ 294 (377)
T cd05629 233 SLGAIMFECLIGWPPFCSENSHET---YRKI---IN----------WR-ETLYFPDDIHLSVEAEDLIRRLIT-NAENRL 294 (377)
T ss_pred ecchhhhhhhcCCCCCCCCCHHHH---HHHH---Hc----------cC-CccCCCCCCCCCHHHHHHHHHHhc-CHhhcC
Confidence 999999999999999986543211 1111 00 00 001101111234568899999997 66665
Q ss_pred --CCHHHHHHH
Q 005923 634 --PSISEVFVT 642 (669)
Q Consensus 634 --Pt~~evl~~ 642 (669)
+++.|++.+
T Consensus 295 ~r~~~~~~l~h 305 (377)
T cd05629 295 GRGGAHEIKSH 305 (377)
T ss_pred CCCCHHHHhcC
Confidence 599998875
No 205
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1e-33 Score=293.11 Aligned_cols=233 Identities=22% Similarity=0.407 Sum_probs=194.4
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
++|.|.| |.||+|.. .+..+|+|..+. ++.+|++++++++|+||+++++++.++...++||||
T Consensus 11 ~lg~g~~-------~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 11 RIGKGSF-------GEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred hcccCCC-------eEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 3899999 99999987 467899998752 366799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+++|+|.+++... .+++.++..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 84 ~~~~~L~~~i~~~------~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 84 LGGGSALDLLRAG------PFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred CCCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 9999999998643 4889999999999999999999998 999999999999999999999999999876432
Q ss_pred ccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (669)
.. ......++..|+|||.+.+..++.++||||||+++|||++|+.|+.........
T Consensus 155 ~~--------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---------------- 210 (277)
T cd06640 155 QI--------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL---------------- 210 (277)
T ss_pred cc--------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh----------------
Confidence 21 122346788999999999999999999999999999999999998754321100
Q ss_pred hhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 596 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. .+........+..++..+.+++.+||+.+|.+||++.+++..
T Consensus 211 ~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 211 F----LIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred h----hhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0 001111223445667789999999999999999999999876
No 206
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.9e-34 Score=305.68 Aligned_cols=258 Identities=24% Similarity=0.361 Sum_probs=190.1
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEec-ccHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMK-GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~-~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
|++.+ .+|.|.| |.||+|... ++.||+|... .....|+.++++++|+||+++++++..++..++|||++
T Consensus 68 y~~~~-~lg~G~~-------g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 68 YTVIK-TLTPGSE-------GRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred cEEEE-EecCCCC-------eEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence 44444 4899999 999999985 5689999864 34678999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
. |+|.+++... ...++|..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 140 ~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 140 S-SDLYTYLTKR----SRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred C-CcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccCc
Confidence 5 6999998653 246899999999999999999999999 9999999999999999999999999997543221
Q ss_pred cccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHH----HHHHHHHhhh
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY----ASISRVLEES 592 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~----~~~~~~~~~~ 592 (669)
......||..|+|||++.+..++.++|||||||++|||+++..++............ ..+...+...
T Consensus 212 ---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~ 282 (357)
T PHA03209 212 ---------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTL 282 (357)
T ss_pred ---------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 112346899999999999999999999999999999999976666432221111100 0111111100
Q ss_pred h----------HHhhhhcccCCc--cCCCCc-------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 593 N----------VREKLRGFIDPS--LRNEYP-------LDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 593 ~----------~~~~l~~~~d~~--l~~~~~-------~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. .......+++.. .+..+. ...+..+.+|+.+||+.||.+|||+.|++.+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 283 KVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred ccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 0 000011111100 000000 1223456679999999999999999999864
No 207
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.9e-34 Score=293.90 Aligned_cols=240 Identities=25% Similarity=0.423 Sum_probs=192.3
Q ss_pred HHhCCCCcccceeeEEEEEEE-CCCeeEEEEecc-------------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF-KGDDAAVKVMKG-------------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~-~g~~vavK~~~~-------------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
+|.|.| |.||+|.. +++.+|+|.++. .+.+|++++++++|+||++++++|.+.+..++|
T Consensus 8 ig~g~~-------~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 8 LGKGAY-------GTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred EeccCC-------eEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 899999 99999987 577899998752 256799999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++++|.+++.+. ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||+++..
T Consensus 81 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 81 MEFVPGGSISSILNRF-----GPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 9999999999999754 35889999999999999999999998 999999999999999999999999999865
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEES 592 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (669)
....... ..........++..|+|||.+.+..++.++||||||+++|||++|+.||.......... ...
T Consensus 153 ~~~~~~~--~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~------~~~--- 221 (265)
T cd06631 153 AWVGLHG--THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF------YIG--- 221 (265)
T ss_pred hhccccc--cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHH------Hhh---
Confidence 3211100 00112234568899999999999999999999999999999999999997543211100 000
Q ss_pred hHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 593 NVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 593 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.... .....+......+.+++.+||+.+|.+||++.|++.
T Consensus 222 ----~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 222 ----AHRG-----LMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ----hccC-----CCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 011223344567899999999999999999999875
No 208
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.6e-34 Score=302.21 Aligned_cols=198 Identities=27% Similarity=0.489 Sum_probs=161.1
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC----CCeeEEEEecc-----cHHHHHHHHHhcCCCCceeEeeEEEe--cCc
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK----GDDAAVKVMKG-----DVSSEINILKKINHSNIIRLSGFCVH--EGN 428 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~----g~~vavK~~~~-----~~~~E~~~l~~l~H~niv~l~g~~~~--~~~ 428 (669)
|.++.-++|.|+| |.||+|... +..+|+|.++. .+.+|++++++++||||+++++++.. +..
T Consensus 2 ~~~~g~~lG~G~~-------g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 74 (317)
T cd07867 2 FEYEGCKVGRGTY-------GHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRK 74 (317)
T ss_pred cceeceEeccCCC-------eeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCe
Confidence 4455557999999 999999873 35789998864 46789999999999999999999864 456
Q ss_pred eeEEEEecCCCCHHHHHhcCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeee----cCCCc
Q 005923 429 TYLVYEFADNGALSDWLHSNRY----QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL----DTNLR 500 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl----~~~~~ 500 (669)
.++||||+.+ +|.+++...+. .....+++..+..++.||+.||.|||+.+ ++||||||+|||+ ++++.
T Consensus 75 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~ 150 (317)
T cd07867 75 VWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGR 150 (317)
T ss_pred EEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCc
Confidence 7999999875 88888754321 12235899999999999999999999999 9999999999999 56689
Q ss_pred EEEcccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 005923 501 AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGD 573 (669)
Q Consensus 501 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~ 573 (669)
+||+|||+++........ ........+|..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 151 ~kl~DfG~a~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 151 VKIADMGFARLFNSPLKP-----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred EEEeeccceeccCCCccc-----ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 999999999876443211 111234568899999999876 45899999999999999999999999743
No 209
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.4e-34 Score=312.80 Aligned_cols=251 Identities=25% Similarity=0.376 Sum_probs=190.7
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecC-----ce
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEG-----NT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~ 429 (669)
.+|.|+| |.||++.. +|+.||+|.+.. .+.+|+++++.++|+||+++++++...+ ..
T Consensus 7 ~lg~G~~-------g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 7 PIGYGAF-------GVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred eeeeCCC-------EEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 4899999 99999986 588999998853 3567999999999999999999998766 78
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+. ++|.+++... ..+++..+..++.||+.||+|||+.+ ++||||||+|||+++++.+||+|||++
T Consensus 80 ~lv~e~~~-~~l~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSP-----QPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEEeeccc-cCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccce
Confidence 99999997 5888888643 46999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
+....... .......++..|+|||.+.+. .++.++|||||||++|||++|+.||.+....+ ....+...
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~ 220 (372)
T cd07853 151 RVEEPDES-------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ---QLDLITDL 220 (372)
T ss_pred eecccCcc-------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH---HHHHHHHH
Confidence 86543221 112234678899999999874 57999999999999999999999998654322 11222211
Q ss_pred HhhhhH----------Hhhh-hcccCCc-cC--CCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 589 LEESNV----------REKL-RGFIDPS-LR--NEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 589 ~~~~~~----------~~~l-~~~~d~~-l~--~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+..... ...+ .....+. .. .........++.+|+.+||+.||.+|||+.|++.+
T Consensus 221 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 221 LGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred cCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 111100 0000 0000000 00 01112234578899999999999999999999875
No 210
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.9e-34 Score=295.43 Aligned_cols=231 Identities=21% Similarity=0.422 Sum_probs=182.9
Q ss_pred HHHhCCCCcccceeeEEEEEEEC---------CCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK---------GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~---------g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
.+|.|+| |.||+|... ...+++|.+.. .+..|+.++++++||||+++++++..++..
T Consensus 2 ~lg~G~~-------~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~ 74 (258)
T cd05078 2 SLGQGTF-------TKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDES 74 (258)
T ss_pred CCCcccc-------hhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCc
Confidence 3789999 999999863 22478887743 356789999999999999999999998999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCc--------E
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLR--------A 501 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~--------~ 501 (669)
++||||+++|+|.++++..+ ..+++..++.++.||+.||+|||+++ ++||||||+|||++.++. +
T Consensus 75 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~ 147 (258)
T cd05078 75 IMVQEYVKFGSLDTYLKKNK----NLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFI 147 (258)
T ss_pred EEEEecCCCCcHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceE
Confidence 99999999999999997642 35899999999999999999999999 999999999999987765 6
Q ss_pred EEcccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHH
Q 005923 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580 (669)
Q Consensus 502 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~ 580 (669)
+++|||++...... ....++..|+|||++.+ ..++.++||||||+++|||++|..++..........
T Consensus 148 ~l~d~g~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~ 215 (258)
T cd05078 148 KLSDPGISITVLPK------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL 215 (258)
T ss_pred EecccccccccCCc------------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH
Confidence 99999998754322 12356788999999987 457999999999999999999964443222111000
Q ss_pred HHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 581 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
.... . +...|.....++.+++.+||+.||.+|||++++++.|
T Consensus 216 ------~~~~-------------~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 216 ------QFYE-------------D--RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ------HHHH-------------c--cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0000 0 1122333345789999999999999999999999886
No 211
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=6.5e-34 Score=293.23 Aligned_cols=242 Identities=29% Similarity=0.461 Sum_probs=194.2
Q ss_pred HHHhCCCCcccceeeEEEEEEECC-----CeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKG-----DDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g-----~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
.+|.|.| |.||+|...+ ..+++|..+. .+.+|+.++++++||||+++++++.. +..++|
T Consensus 13 ~lg~g~~-------g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 13 CIGEGQF-------GDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred eeCCccc-------eeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 4899999 9999998732 3588998753 36679999999999999999999864 567899
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||+++..
T Consensus 85 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 85 MELAPLGELRSYLQVNK----YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEcCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeec
Confidence 99999999999997542 35899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
...... ......++..|+|||.+....++.++||||||+++|||++ |..||.+....+.. ..+ .
T Consensus 158 ~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~---~~~----~- 222 (270)
T cd05056 158 EDESYY-------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI---GRI----E- 222 (270)
T ss_pred ccccce-------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH---HHH----H-
Confidence 443210 1112234567999999998899999999999999999996 99999765432110 000 0
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcC
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSS 649 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 649 (669)
. ..+...+..++..+.+++.+||..+|.+|||+.|+++.|+++...
T Consensus 223 --------~----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 223 --------N----GERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred --------c----CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0 001122344566899999999999999999999999999998654
No 212
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=9.4e-34 Score=300.87 Aligned_cols=261 Identities=19% Similarity=0.331 Sum_probs=189.4
Q ss_pred HHHhC--CCCcccceeeEEEEEEE--CCCeeEEEEeccc---------HHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 366 KIATG--SFSEENRIQGSVYRGSF--KGDDAAVKVMKGD---------VSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 366 ~~~~g--~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~---------~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
.+|.| +| |+||++.. +|+.||+|.++.+ +..|+++++.++||||++++++|..++..++|
T Consensus 5 ~ig~G~~~~-------~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 77 (327)
T cd08227 5 VIGRGFEDL-------MTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 77 (327)
T ss_pred hccccccce-------EEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEE
Confidence 37777 56 89999987 4788999998632 45699999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++|+|.+++..+. ...+++..++.++.|++.||+|||+++ ++||||||+|||++.++.++++||+.....
T Consensus 78 ~e~~~~~~l~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~ 151 (327)
T cd08227 78 TSFMAYGSAKDLICTHF---MDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSM 151 (327)
T ss_pred EeccCCCcHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcc
Confidence 99999999999997542 235899999999999999999999999 999999999999999999999999876544
Q ss_pred CCCccccCCcccceeeeccccccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN--GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
........ ..........++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ...........
T Consensus 152 ~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~ 228 (327)
T cd08227 152 INHGQRLR-VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKLNGTVP 228 (327)
T ss_pred cccccccc-ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH--HHHHHhcCCcc
Confidence 22111000 00011122356778999999976 468999999999999999999999997543211 11111100000
Q ss_pred h----hh-HHhhhh-----cccCC-----------------ccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 591 E----SN-VREKLR-----GFIDP-----------------SLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 591 ~----~~-~~~~l~-----~~~d~-----------------~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. .. ..+.+. ...+. ....+........+.+++.+||+.||.+|||++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 229 CLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred ccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0 00 000000 00000 00011222345678999999999999999999999874
No 213
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.5e-34 Score=297.33 Aligned_cols=250 Identities=21% Similarity=0.319 Sum_probs=189.9
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
++.|.| |.||++.. .|+.+++|.++. .+.+|++++++++|+||+++++++.+....++|+||
T Consensus 8 l~~g~~-------~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 8 IGEGTY-------GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred ecccCC-------eEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 789999 99999998 478899998852 356899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
++ ++|.+++... ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 152 (284)
T cd07839 81 CD-QDLKKYFDSC----NGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIP 152 (284)
T ss_pred CC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence 97 5898888653 245899999999999999999999999 999999999999999999999999999865432
Q ss_pred ccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
. .......++..|+|||.+.+. .++.++||||||+++|||++|+.|+....+.+. ....+...+.....
T Consensus 153 ~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~ 222 (284)
T cd07839 153 V--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTE 222 (284)
T ss_pred C--------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHH--HHHHHHHHhCCCCh
Confidence 1 112234578899999998764 479999999999999999999998764333221 11222221111100
Q ss_pred --HhhhhcccCCccCC---------CCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 595 --REKLRGFIDPSLRN---------EYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 595 --~~~l~~~~d~~l~~---------~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
...+....+..... .....+..++.+++.+||+.||.+|||++|++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 223 ESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00011111110000 111234567889999999999999999999986
No 214
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.9e-34 Score=295.94 Aligned_cols=234 Identities=26% Similarity=0.364 Sum_probs=186.9
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
+|.|.| |.||+|.. .+..+|+|.... ++.+|++++++++||||+++++++..++..++||||+
T Consensus 9 lg~g~~-------~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 9 LGHGNG-------GTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred eccCCC-------eEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 899999 99999987 578899998743 3667999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
++|+|..+. .+++..+..++.|++.||+|||+.+ ++|+||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~ 149 (279)
T cd06619 82 DGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI 149 (279)
T ss_pred CCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceeccccc
Confidence 999997653 3678899999999999999999999 9999999999999999999999999998654321
Q ss_pred cccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHH-HHHHHHHHHhhhhHH
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL-LYASISRVLEESNVR 595 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~ 595 (669)
.....++..|+|||++.+..++.++||||||+++|||++|+.||......+... .....
T Consensus 150 ----------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---------- 209 (279)
T cd06619 150 ----------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLL---------- 209 (279)
T ss_pred ----------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHH----------
Confidence 123468889999999999999999999999999999999999997432211100 00000
Q ss_pred hhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 596 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
..+.....+.+ .......++.+++.+||+.||.+||+++|+++.
T Consensus 210 ~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 210 QCIVDEDPPVL---PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHhccCCCCC---CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00000011111 111234568999999999999999999999875
No 215
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.7e-34 Score=300.64 Aligned_cols=256 Identities=21% Similarity=0.376 Sum_probs=193.1
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
|...+ ++|.|+| |.||+|.. .++.+|+|.++. .+.+|+.++++++||||+++++++..++..
T Consensus 8 y~~~~-~lg~G~~-------g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (309)
T cd07872 8 YIKLE-KLGEGTY-------ATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSL 79 (309)
T ss_pred eEEEE-EecccCC-------EEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeE
Confidence 44433 4899999 99999987 467899998862 356899999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+++ +|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||++
T Consensus 80 ~lv~e~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 80 TLVFEYLDK-DLKQYMDDC----GNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred EEEEeCCCC-CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccc
Confidence 999999985 899988654 245889999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
+....... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+....+.. ..+...
T Consensus 152 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~---~~~~~~ 220 (309)
T cd07872 152 RAKSVPTK--------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDEL---HLIFRL 220 (309)
T ss_pred eecCCCcc--------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHH
Confidence 76533221 1123457889999999865 56899999999999999999999999865432211 111111
Q ss_pred HhhhhHH--h------hhhcccCCccCC----CCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 589 LEESNVR--E------KLRGFIDPSLRN----EYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 589 ~~~~~~~--~------~l~~~~d~~l~~----~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+...... . .....-.+.... .....+..++.+|+.+||+.||.+|||+.|++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 221 LGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 1110000 0 000000011000 0011245568899999999999999999999873
No 216
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.1e-34 Score=295.88 Aligned_cols=249 Identities=23% Similarity=0.336 Sum_probs=195.5
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
|++.+ .+|.|.| |+||++... |..+|+|++.. .+.+|+++++.++||||+++++++...+..
T Consensus 7 ~~~~~-~ig~g~~-------g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 78 (284)
T cd06620 7 LETIS-DLGAGNG-------GSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNI 78 (284)
T ss_pred HHHHH-HcCCCCC-------eEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEE
Confidence 44444 4899999 999999985 78899997642 366899999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~-~~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
++||||+++|+|.+++... +.+++..+..++.+++.||.|||+ .+ ++||||+|+||++++++.++|+|||+
T Consensus 79 ~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl 150 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKG-----GPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGV 150 (284)
T ss_pred EEEEecCCCCCHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCc
Confidence 9999999999999998753 358999999999999999999997 46 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHH-HHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE-LLYASISR 587 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~-~~~~~~~~ 587 (669)
++...... .....|+..|+|||.+.++.++.++|||||||++|||++|+.||......+.. .....+.
T Consensus 151 ~~~~~~~~----------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~- 219 (284)
T cd06620 151 SGELINSI----------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGIL- 219 (284)
T ss_pred ccchhhhc----------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHH-
Confidence 87543211 12346889999999999889999999999999999999999999854321100 0000000
Q ss_pred HHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 588 VLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 588 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
+.+..++...........++..+.+++.+||+.||.+|||+.|++++.
T Consensus 220 --------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 220 --------DLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred --------HHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 111111111111111123556789999999999999999999999864
No 217
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=9e-34 Score=294.20 Aligned_cols=237 Identities=26% Similarity=0.410 Sum_probs=189.6
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
++|.|+| |.||+|..+ +..+++|.+.. .+.+|+++++.++|+|++++++++..++..++||||+
T Consensus 12 ~lg~g~~-------g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 12 ELGDGAF-------GKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred hcccCCC-------eEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence 4899999 999999985 56778888742 3567999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
++|+|.+++.+. ...+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 85 ~~~~l~~~~~~~----~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 85 AGGAVDAVMLEL----ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 157 (282)
T ss_pred CCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc
Confidence 999999988653 246999999999999999999999999 9999999999999999999999999987653321
Q ss_pred cccCCcccceeeecccccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIE-----NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
.......++..|+|||++. +..++.++|||||||++|||++|+.||......+. .......
T Consensus 158 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~------~~~~~~~ 223 (282)
T cd06643 158 --------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV------LLKIAKS 223 (282)
T ss_pred --------cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH------HHHHhhc
Confidence 1122346888999999984 45678899999999999999999999875432110 0000000
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
..+. ...+...+.++.+++.+||+.||.+||++.++++.
T Consensus 224 ----------~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 224 ----------EPPT--LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred ----------CCCC--CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011 11233345678999999999999999999998754
No 218
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.2e-33 Score=291.33 Aligned_cols=246 Identities=21% Similarity=0.373 Sum_probs=184.2
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-CC---eeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-GD---DAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-g~---~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
++|.|.| |.||+|... +. .+++|.++. .+.+|+.+++.++||||+++++.|......++||
T Consensus 2 ~lg~G~~-------g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~ 74 (268)
T cd05086 2 EIGNGWF-------GKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVF 74 (268)
T ss_pred cCCCCcC-------ceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEE
Confidence 3789999 999999763 22 355666542 4677889999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++++.+. ....+.+..+..++.||+.||+|||+.+ ++||||||+|||++.++.+||+|||++....
T Consensus 75 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~ 150 (268)
T cd05086 75 EYCELGDLKSYLSQEQW-HRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRY 150 (268)
T ss_pred ecCCCCcHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccC
Confidence 99999999999986531 2345777888999999999999999998 9999999999999999999999999986532
Q ss_pred CCccccCCcccceeeeccccccccccccccc-------CCCCchhhHHHHHHHHHHHHcC-CCCCCCCchhHHHHHHHHH
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-------GVITPKLDVFAFGVVVLELLSG-REAVTGDQNCEAELLYASI 585 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~s~~sDV~S~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~ 585 (669)
.... ........++..|+|||++.. ..++.++||||||+++|||+++ ..|+......+ .+
T Consensus 151 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~------~~ 218 (268)
T cd05086 151 KEDY------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE------VL 218 (268)
T ss_pred cchh------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH------HH
Confidence 2111 011123467889999999853 3457899999999999999974 56665433211 11
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
...+. +....+.++.+... ....+.+++..|| .+|.+||+++||++.|.
T Consensus 219 ~~~~~-----~~~~~~~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 219 NHVIK-----DQQVKLFKPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHh-----hcccccCCCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 11111 11122233333222 3456788999999 67999999999998874
No 219
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=8e-34 Score=292.26 Aligned_cols=245 Identities=26% Similarity=0.440 Sum_probs=193.2
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC---CCeeEEEEecc-----------------cHHHHHHHHHh-cCCCCcee
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK---GDDAAVKVMKG-----------------DVSSEINILKK-INHSNIIR 418 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~---g~~vavK~~~~-----------------~~~~E~~~l~~-l~H~niv~ 418 (669)
|++.+ .+|.|.| |.||+|..+ ++.+|+|.++. ++..|+.++.+ ++||||++
T Consensus 2 y~~~~-~ig~G~~-------~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~ 73 (269)
T cd08528 2 YAVLE-HLGSGAF-------GCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVR 73 (269)
T ss_pred chhhh-hhcCCCC-------ceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeee
Confidence 34444 4899999 999999985 46789997641 24568887765 79999999
Q ss_pred EeeEEEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeeecC
Q 005923 419 LSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLKTSNILLDT 497 (669)
Q Consensus 419 l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~-~~~~~ivHrDik~~NILl~~ 497 (669)
+++++.+++..++||||+++++|.+++...+ .....+++..+++++.|++.||.|||+ .+ ++|+||+|+|||+++
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~ 149 (269)
T cd08528 74 YYKTFLENDRLYIVMDLIEGAPLGEHFNSLK-EKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGE 149 (269)
T ss_pred EEeeEccCCeEEEEEecCCCCcHHHHHHHHH-hccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECC
Confidence 9999999999999999999999999986432 123468999999999999999999996 56 999999999999999
Q ss_pred CCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhH
Q 005923 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577 (669)
Q Consensus 498 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~ 577 (669)
++.+||+|||++....... ......++..|+|||.+.++.++.++||||||+++|||++|+.||.......
T Consensus 150 ~~~~~l~dfg~~~~~~~~~---------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~ 220 (269)
T cd08528 150 DDKVTITDFGLAKQKQPES---------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS 220 (269)
T ss_pred CCcEEEecccceeeccccc---------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH
Confidence 9999999999998754322 1223567889999999999999999999999999999999999987543211
Q ss_pred HHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 578 AELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
..... .+..............+.+++.+||+.||.+||++.|+..+|+
T Consensus 221 ------~~~~~-------------~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 221 ------LATKI-------------VEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ------HHHHH-------------hhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 00000 0011111111123457899999999999999999999999875
No 220
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4e-34 Score=297.70 Aligned_cols=237 Identities=25% Similarity=0.352 Sum_probs=191.5
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|+| |.||++... ++.+|+|.+.. .+..|+.++++++|+|++.+++.+..++..++|||
T Consensus 8 ig~G~~-------g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 8 LGKGGF-------GEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred eecCCC-------eEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 799999 999999984 67899998743 24579999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++.....
T Consensus 81 ~~~g~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05630 81 LMNGGDLKFHIYHMG---EAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE 154 (285)
T ss_pred ecCCCcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence 999999999996532 245899999999999999999999998 99999999999999999999999999876543
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
... .....|+..|+|||.+.+..++.++||||||+++|||++|+.||......... .........
T Consensus 155 ~~~---------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~---~~~~~~~~~--- 219 (285)
T cd05630 155 GQT---------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR---EEVERLVKE--- 219 (285)
T ss_pred Ccc---------ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH---HHHHhhhhh---
Confidence 211 12346899999999999999999999999999999999999999854321100 000000000
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS-----ISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~~ 642 (669)
....++......+.+|+.+||+.||.+||| +.|++++
T Consensus 220 -----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 220 -----------VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred -----------hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 001123334556899999999999999999 7888863
No 221
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=8.4e-34 Score=295.23 Aligned_cols=237 Identities=24% Similarity=0.341 Sum_probs=191.7
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|+| |+||++... ++.+|+|.++. .+.+|+++|++++|+|++.+.+++..++..++|||
T Consensus 8 lg~G~~-------g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 8 LGKGGF-------GEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred EecCCC-------eEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 899999 999999984 77899998752 24579999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 81 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05632 81 IMNGGDLKFHIYNM---GNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPE 154 (285)
T ss_pred eccCccHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCC
Confidence 99999999998753 2246999999999999999999999999 99999999999999999999999999976543
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. ......|+..|+|||++.+..++.++|+||||+++|||++|+.||.+....... ..+..
T Consensus 155 ~~---------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~---~~~~~------- 215 (285)
T cd05632 155 GE---------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR---EEVDR------- 215 (285)
T ss_pred CC---------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHH-------
Confidence 21 112346899999999999999999999999999999999999999864432110 11100
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS-----ISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~~ 642 (669)
.+... ...++......+.+|+.+||+.||.+||+ ++|++..
T Consensus 216 --~~~~~-----~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 216 --RVLET-----EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred --hhhcc-----ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 01000 01223344556889999999999999999 6666654
No 222
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=9.2e-34 Score=292.31 Aligned_cols=245 Identities=26% Similarity=0.428 Sum_probs=191.4
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-----CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecC----
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-----GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEG---- 427 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-----g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~---- 427 (669)
.+|.|+| |.||+|.+. +..+|||.++. ++.+|++++++++||||+++++++....
T Consensus 6 ~ig~g~~-------g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 6 MLGKGEF-------GSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred cccCCCC-------CCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCc
Confidence 3899999 999999863 56799998864 2567999999999999999999987542
Q ss_pred --ceeEEEEecCCCCHHHHHhcCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc
Q 005923 428 --NTYLVYEFADNGALSDWLHSNRYQ-TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504 (669)
Q Consensus 428 --~~~lV~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 504 (669)
..++++||+++|+|.+++...+.. ....+++..+++++.|++.||+|||+.+ ++||||||+||++++++.+||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEEC
Confidence 237899999999999998643211 2235899999999999999999999998 9999999999999999999999
Q ss_pred ccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 583 (669)
|||+++........ .......++..|++||.+....++.++||||||+++|||++ |+.|+.+....+ ...
T Consensus 156 dfg~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~---~~~ 226 (273)
T cd05074 156 DFGLSKKIYSGDYY------RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE---IYN 226 (273)
T ss_pred cccccccccCCcce------ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH---HHH
Confidence 99999876433211 01112334568999999999999999999999999999999 888876543211 100
Q ss_pred HHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005923 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 646 (669)
. ... .. ....+......+.+++.+||+.+|.+||++.|+++.|+++
T Consensus 227 ~----~~~---------~~----~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 227 Y----LIK---------GN----RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred H----HHc---------CC----cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 000 00 0111223456789999999999999999999999999876
No 223
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.8e-34 Score=311.68 Aligned_cols=244 Identities=22% Similarity=0.327 Sum_probs=188.4
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.+|.|.| |.||+|.. .++.+|+|.++. .+.+|++++++++|+||+++++.+.+++..++||
T Consensus 8 ~LG~G~~-------g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 8 TLGIGAF-------GEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred EEEeCCC-------EEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 3899999 99999987 477899999853 3567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++.+. +.+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~ 152 (382)
T cd05625 81 DYIPGGDMMSLLIRM-----GIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 152 (382)
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccc
Confidence 999999999999754 35889999999999999999999999 9999999999999999999999999986432
Q ss_pred CCcccc---C------------------------------------CcccceeeecccccccccccccccCCCCchhhHH
Q 005923 514 SDEHEQ---G------------------------------------GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554 (669)
Q Consensus 514 ~~~~~~---~------------------------------------~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~ 554 (669)
...... . ...........||..|+|||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Diw 232 (382)
T cd05625 153 WTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWW 232 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEE
Confidence 110000 0 0000011235799999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC
Q 005923 555 AFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP 634 (669)
Q Consensus 555 S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP 634 (669)
||||++|||++|+.||.+....+... ... .. ...+..+.......++.+++.+|+ .+|.+|+
T Consensus 233 SlGvil~elltG~~Pf~~~~~~~~~~------~i~----------~~-~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~ 294 (382)
T cd05625 233 SVGVILYEMLVGQPPFLAQTPLETQM------KVI----------NW-QTSLHIPPQAKLSPEASDLIIKLC-RGPEDRL 294 (382)
T ss_pred echHHHHHHHhCCCCCCCCCHHHHHH------HHH----------cc-CCCcCCCCcccCCHHHHHHHHHHc-cCHhHcC
Confidence 99999999999999998654322110 000 00 011111111233456778888876 5999999
Q ss_pred C---HHHHHHH
Q 005923 635 S---ISEVFVT 642 (669)
Q Consensus 635 t---~~evl~~ 642 (669)
+ +.|++.+
T Consensus 295 ~~~~~~ei~~h 305 (382)
T cd05625 295 GKNGADEIKAH 305 (382)
T ss_pred CCCCHHHHhcC
Confidence 7 8877653
No 224
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=9.6e-34 Score=291.42 Aligned_cols=241 Identities=23% Similarity=0.364 Sum_probs=189.1
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc------------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG------------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~------------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
|+..+ .+|+|.| |.||++.. .+..+++|.++. .+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~~-~lg~g~~-------g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 75 (266)
T cd06651 4 WRRGK-LLGQGAF-------GRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD 75 (266)
T ss_pred ccccc-eecCCCC-------EEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc
Confidence 34444 3899999 99999987 477899998742 25679999999999999999999875
Q ss_pred c--CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEE
Q 005923 426 E--GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKI 503 (669)
Q Consensus 426 ~--~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl 503 (669)
. ...++++||+++++|.+++.+. ..+++..++.++.|++.||+|||+.+ ++||||+|+||++++++.+||
T Consensus 76 ~~~~~~~l~~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l 147 (266)
T cd06651 76 RAEKTLTIFMEYMPGGSVKDQLKAY-----GALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKL 147 (266)
T ss_pred CCCCEEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEE
Confidence 3 5678999999999999999754 34899999999999999999999998 999999999999999999999
Q ss_pred cccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 504 TNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 504 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
+|||+++......... .......++..|+|||.+.+..++.++||||||+++|||++|+.||......+
T Consensus 148 ~dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~------ 216 (266)
T cd06651 148 GDFGASKRLQTICMSG-----TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA------ 216 (266)
T ss_pred ccCCCccccccccccC-----CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH------
Confidence 9999998654321110 11123457889999999999999999999999999999999999997533211
Q ss_pred HHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.+. ...........+......+.+++ +||..+|.+||+++||+.
T Consensus 217 ~~~-------------~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 217 AIF-------------KIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHH-------------HHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 000 00001111233444555677777 788899999999999975
No 225
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-33 Score=296.28 Aligned_cols=240 Identities=23% Similarity=0.421 Sum_probs=195.2
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
|.+.+ +++.|.| |.||+|.. +++.+++|.+.. .+.+|+.++++++|+|++++++++..++..+
T Consensus 21 y~~~~-~lg~g~~-------g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (296)
T cd06655 21 YTRYE-KIGQGAS-------GTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELF 92 (296)
T ss_pred EEEEE-EEecCCC-------eEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEE
Confidence 44333 3899999 99999986 578999998743 3567999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcc
Q 005923 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR 510 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~ 510 (669)
+|+||+++++|.+++... .+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.
T Consensus 93 lv~e~~~~~~L~~~~~~~------~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 93 VVMEYLAGGSLTDVVTET------CMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred EEEEecCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccch
Confidence 999999999999998643 4899999999999999999999999 9999999999999999999999999988
Q ss_pred ccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
....... ......++..|+|||.+.+..++.++|||||||++|||++|+.||.+........ ....
T Consensus 164 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~------~~~~ 229 (296)
T cd06655 164 QITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIAT 229 (296)
T ss_pred hcccccc--------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHHh
Confidence 6543321 1123467889999999999999999999999999999999999998654321100 0000
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
........+...+..+.+++.+||..||.+||++.+++..
T Consensus 230 ------------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 230 ------------NGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred ------------cCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000112233455678899999999999999999999864
No 226
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4e-34 Score=303.24 Aligned_cols=226 Identities=26% Similarity=0.419 Sum_probs=184.9
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc----------HHHHHHHHHhcC-CCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD----------VSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~----------~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|.| |.||++.. +|+.||+|+++.+ +..|..++..+. |++|+++.+++..++..++||
T Consensus 8 lg~G~~-------g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 8 LGKGSF-------GKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred EEecCC-------eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 899999 99999987 4778999998642 445788888875 577888999998888999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... ..+++.+++.++.|++.||+|||+++ ++||||||+|||+++++.+||+|||+++...
T Consensus 81 Ey~~~g~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~ 152 (323)
T cd05615 81 EYVNGGDLMYHIQQV-----GKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHM 152 (323)
T ss_pred cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccC
Confidence 999999999999754 35999999999999999999999999 9999999999999999999999999998643
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .......||..|+|||++.+..++.++|||||||++|||++|+.||.+..... .. .....
T Consensus 153 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~---~~i~~--- 215 (323)
T cd05615 153 VDG--------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE---LF---QSIME--- 215 (323)
T ss_pred CCC--------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH---HH---HHHHh---
Confidence 221 11234568999999999999999999999999999999999999998654311 11 11111
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 636 (669)
. ...+|......+.+++.+||+.||.+|++.
T Consensus 216 ----------~--~~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 216 ----------H--NVSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ----------C--CCCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 0 112334455678999999999999999985
No 227
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.4e-33 Score=290.14 Aligned_cols=243 Identities=26% Similarity=0.427 Sum_probs=193.0
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
.|++.+ ++|.|.| |.||++.. +++.+|+|.++. .+.+|+.+++.++||||+++++++..++..
T Consensus 10 ~~~~~~-~lg~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~ 81 (267)
T cd06645 10 DFELIQ-RIGSGTY-------GDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKL 81 (267)
T ss_pred HHHHHH-HhCCCCC-------eEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Confidence 466655 4899999 99999987 478899999863 256799999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+++++|.+++... +.+++.+++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++
T Consensus 82 ~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd06645 82 WICMEFCGGGSLQDIYHVT-----GPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVS 153 (267)
T ss_pred EEEEeccCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceee
Confidence 9999999999999998754 35899999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCccccCCcccceeeecccccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE---NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
....... .......|+..|+|||.+. .+.++.++|||||||++|||++|+.|+.......... .
T Consensus 154 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~--~--- 220 (267)
T cd06645 154 AQITATI--------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--L--- 220 (267)
T ss_pred eEccCcc--------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH--h---
Confidence 7654321 1122346889999999985 4568899999999999999999999987543211100 0
Q ss_pred HHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 587 RVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 587 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.. ...+..+.... ....+..+.+++.+||+.||++||++++|++
T Consensus 221 -~~--------~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 221 -MT--------KSNFQPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred -hh--------ccCCCCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00 00111111111 1123456889999999999999999999875
No 228
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9.5e-34 Score=296.70 Aligned_cols=241 Identities=24% Similarity=0.412 Sum_probs=195.7
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
.|.+.+ ++|.|.| |.||++.. .++.+|+|.+.. .+.+|+.++++++|+||+++++++..++..
T Consensus 20 ~y~~~~-~lg~g~~-------g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~ 91 (297)
T cd06656 20 KYTRFE-KIGQGAS-------GTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 91 (297)
T ss_pred hceeee-eeccCCC-------eEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEE
Confidence 444444 3899999 99999986 588999998853 356799999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+++++|.+++.+. .+++.++..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++
T Consensus 92 ~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~ 162 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTET------CMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC 162 (297)
T ss_pred EEeecccCCCCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccc
Confidence 9999999999999999643 4889999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 589 (669)
........ ......++..|+|||.+.+..++.++|+||||+++|||++|+.||.+...... .
T Consensus 163 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~-~--------- 224 (297)
T cd06656 163 AQITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-L--------- 224 (297)
T ss_pred eEccCCcc--------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh-e---------
Confidence 86543321 11234678899999999999999999999999999999999999975432110 0
Q ss_pred hhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 590 EESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 590 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.............+...+..+.+++.+||+.||.+||++.|+++.
T Consensus 225 --------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 225 --------YLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred --------eeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000011112334455678999999999999999999999973
No 229
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.4e-33 Score=292.72 Aligned_cols=253 Identities=25% Similarity=0.397 Sum_probs=190.7
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
.++.|.| |.||+|... |+.+|+|++.. .+.+|++++++++|+|++++++++..+...++|||
T Consensus 8 ~l~~g~~-------~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 8 KIGEGSY-------GVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred eecccCC-------eEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 3799999 999999984 78899998742 25689999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|++++.|..++... ..++|..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 81 YCDHTVLNELEKNP-----RGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred ccCccHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 99998888877543 35899999999999999999999998 99999999999999999999999999987654
Q ss_pred CccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH-HHHhhh
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS-RVLEES 592 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~-~~~~~~ 592 (669)
... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+....+......... ......
T Consensus 153 ~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 224 (286)
T cd07847 153 PGD--------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRH 224 (286)
T ss_pred Ccc--------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHH
Confidence 321 1122456788999999876 557899999999999999999999998655432211111000 000000
Q ss_pred hH----HhhhhcccCCccCCCCc-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 593 NV----REKLRGFIDPSLRNEYP-----LDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 593 ~~----~~~l~~~~d~~l~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.. ......+..+......+ ...+..+.+++.+||+.||.+||++.|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 225 QQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred hhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00 00000111111111111 123466889999999999999999999875
No 230
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.9e-34 Score=307.11 Aligned_cols=254 Identities=26% Similarity=0.373 Sum_probs=190.7
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
..|.+.+ .+|.|+| |.||++.. .|..+|+|.++. .+.+|+.+++.++||||+++++++...
T Consensus 21 ~~y~~~~-~lg~G~~-------g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 92 (359)
T cd07876 21 KRYQQLK-PIGSGAQ-------GIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQ 92 (359)
T ss_pred hceEEEE-EeecCCC-------EEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccC
Confidence 4555555 4999999 99999987 478899999853 356799999999999999999998654
Q ss_pred C------ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCc
Q 005923 427 G------NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLR 500 (669)
Q Consensus 427 ~------~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~ 500 (669)
+ ..++||||+++ +|.+.++. .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.
T Consensus 93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~ 161 (359)
T cd07876 93 KSLEEFQDVYLVMELMDA-NLCQVIHM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCT 161 (359)
T ss_pred CCccccceeEEEEeCCCc-CHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCC
Confidence 3 46999999975 67777643 3788999999999999999999999 999999999999999999
Q ss_pred EEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHH
Q 005923 501 AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580 (669)
Q Consensus 501 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~ 580 (669)
+||+|||+++...... ......||..|+|||.+.+..++.++||||||+++|||++|+.||.+.+..+.
T Consensus 162 ~kl~Dfg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~-- 230 (359)
T cd07876 162 LKILDFGLARTACTNF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ-- 230 (359)
T ss_pred EEEecCCCccccccCc---------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH--
Confidence 9999999998643321 12335688999999999999999999999999999999999999986543211
Q ss_pred HHHHHHHHHhhhh------HHhhhhcccC--CccC----------------CCCcHHHHHHHHHHHHHhcccCCCCCCCH
Q 005923 581 LYASISRVLEESN------VREKLRGFID--PSLR----------------NEYPLDLAFSMAQLAKNCTAHDLNARPSI 636 (669)
Q Consensus 581 ~~~~~~~~~~~~~------~~~~l~~~~d--~~l~----------------~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 636 (669)
+..+...+.... ....+..+.. +... ..........+.+|+.+||+.||.+|||+
T Consensus 231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~ 309 (359)
T cd07876 231 -WNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISV 309 (359)
T ss_pred -HHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCH
Confidence 111111110000 0000000000 0000 00111224568999999999999999999
Q ss_pred HHHHHH
Q 005923 637 SEVFVT 642 (669)
Q Consensus 637 ~evl~~ 642 (669)
.|++.+
T Consensus 310 ~e~l~h 315 (359)
T cd07876 310 DEALRH 315 (359)
T ss_pred HHHhcC
Confidence 999985
No 231
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.3e-34 Score=303.52 Aligned_cols=240 Identities=23% Similarity=0.341 Sum_probs=188.1
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
++|.|+| |.||++..+ ++.+|+|.+.. .+..|+.++..++|+||+++++++.+++..++||
T Consensus 8 ~lG~G~f-------g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 8 VIGRGAF-------GEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred EEEeCCC-------eEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 3899999 999999985 56789999853 2567899999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++++. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 ey~~~g~L~~~l~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~ 153 (332)
T cd05623 81 DYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLM 153 (332)
T ss_pred eccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecc
Confidence 999999999999763 235899999999999999999999999 9999999999999999999999999997653
Q ss_pred CCccccCCcccceeeecccccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIE-----NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
.... .......||..|+|||++. ...++.++|||||||++|||++|+.||......+. ....
T Consensus 154 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~------~~~i 220 (332)
T cd05623 154 EDGT-------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKI 220 (332)
T ss_pred cCCc-------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH------HHHH
Confidence 3221 1122357899999999986 35688999999999999999999999986543211 1111
Q ss_pred HhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCC--CCCCCHHHHHHH
Q 005923 589 LEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDL--NARPSISEVFVT 642 (669)
Q Consensus 589 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP--~~RPt~~evl~~ 642 (669)
.... ..+ .+ ......+...+.+|+++|+..++ ..|+++.|++++
T Consensus 221 ~~~~------~~~---~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 221 MNHK------ERF---QF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred hCCC------ccc---cC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 1100 000 00 11122345678899999885544 447899999877
No 232
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.2e-33 Score=288.85 Aligned_cols=229 Identities=26% Similarity=0.484 Sum_probs=182.8
Q ss_pred HHHhCCCCcccceeeEEEEEEECCC------------eeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKGD------------DAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g~------------~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
.+|.|+| |.||+|...+. .+++|.++. .+.+|+.++++++||||+++++++.. +
T Consensus 2 ~lg~G~~-------~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 73 (259)
T cd05037 2 HLGQGTF-------TNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-D 73 (259)
T ss_pred ccccccc-------ceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-C
Confidence 3789999 99999998533 377887643 36689999999999999999999988 7
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC-------c
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL-------R 500 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~-------~ 500 (669)
..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+++ ++||||||+|||++.++ .
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~ 146 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREK----NNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPF 146 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCcee
Confidence 8899999999999999998642 26899999999999999999999998 99999999999999887 7
Q ss_pred EEEcccCCccccCCCccccCCcccceeeecccccccccccccccC--CCCchhhHHHHHHHHHHHHcC-CCCCCCCchhH
Q 005923 501 AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG--VITPKLDVFAFGVVVLELLSG-REAVTGDQNCE 577 (669)
Q Consensus 501 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~s~~sDV~S~Gvvl~elltg-~~p~~~~~~~~ 577 (669)
+||+|||+++..... ....++..|+|||++.+. .++.++||||||+++|||++| ..|+......+
T Consensus 147 ~kl~Dfg~a~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~ 214 (259)
T cd05037 147 IKLSDPGIPITVLSR------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE 214 (259)
T ss_pred EEeCCCCcccccccc------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh
Confidence 999999999865431 123456789999999876 789999999999999999994 66665432111
Q ss_pred HHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 578 AELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
... ... ... ..+......+.+++.+||..+|.+|||+.||++.|
T Consensus 215 ~~~-------~~~------------~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 215 KER-------FYQ------------DQH---RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred HHH-------HHh------------cCC---CCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 000 000 000 00111115789999999999999999999999877
No 233
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.9e-34 Score=312.27 Aligned_cols=244 Identities=23% Similarity=0.333 Sum_probs=189.5
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
++|.|+| |.||++... ++.+|||.++. .+.+|+++|++++|+||+++++.+.+++..++||
T Consensus 8 ~lG~G~~-------g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 8 TIGIGAF-------GEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred EEEeCCC-------eEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 4899999 999999874 78899999853 2567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++.+. +.+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 81 E~~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~ 152 (376)
T cd05598 81 DYIPGGDMMSLLIRL-----GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 152 (376)
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCcccc
Confidence 999999999999754 35888999999999999999999999 9999999999999999999999999985332
Q ss_pred CCcccc-------------------C----------------CcccceeeecccccccccccccccCCCCchhhHHHHHH
Q 005923 514 SDEHEQ-------------------G----------------GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGV 558 (669)
Q Consensus 514 ~~~~~~-------------------~----------------~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gv 558 (669)
...... . ...........||..|+|||++.+..++.++|||||||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 232 (376)
T cd05598 153 WTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 232 (376)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccc
Confidence 100000 0 00000112357999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC---C
Q 005923 559 VVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP---S 635 (669)
Q Consensus 559 vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP---t 635 (669)
++|||++|+.||.+....+... .... . ...+.......+...+.+++.+|+ .+|.+|+ +
T Consensus 233 ilyell~G~~Pf~~~~~~~~~~------~i~~----------~-~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t 294 (376)
T cd05598 233 ILYEMLVGQPPFLADTPAETQL------KVIN----------W-ETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNG 294 (376)
T ss_pred eeeehhhCCCCCCCCCHHHHHH------HHhc----------c-CccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCC
Confidence 9999999999998655322110 0000 0 001111111234456788888876 5999999 8
Q ss_pred HHHHHHH
Q 005923 636 ISEVFVT 642 (669)
Q Consensus 636 ~~evl~~ 642 (669)
+.|++.+
T Consensus 295 ~~ell~h 301 (376)
T cd05598 295 ADEIKAH 301 (376)
T ss_pred HHHHhCC
Confidence 8998866
No 234
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.6e-33 Score=290.93 Aligned_cols=239 Identities=25% Similarity=0.414 Sum_probs=194.0
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
|++.. .++.|.| |.||+|.. +++.+++|.+.. .+.+|++++++++|+|++++.+++.++...
T Consensus 3 y~~~~-~lg~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 74 (274)
T cd06609 3 FTLLE-CIGKGSF-------GEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKL 74 (274)
T ss_pred hhhhh-hhcCCCC-------eEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeE
Confidence 33333 4899999 99999998 477899998753 356899999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++|+||+++++|.+++... .+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++
T Consensus 75 ~~v~e~~~~~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 75 WIIMEYCGGGSCLDLLKPG------KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred EEEEEeeCCCcHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccc
Confidence 9999999999999999753 5899999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 589 (669)
+....... ......++..|+|||.+.+..++.++||||||+++|||++|+.||....... . ..
T Consensus 146 ~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--~----~~--- 208 (274)
T cd06609 146 GQLTSTMS--------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--V----LF--- 208 (274)
T ss_pred eeeccccc--------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--H----HH---
Confidence 87754321 1123467888999999999899999999999999999999999997543211 0 00
Q ss_pred hhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 590 EESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 590 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+.....+.+... ..+..+.+++.+||..||.+|||+++++..
T Consensus 209 -------~~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 209 -------LIPKNNPPSLEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred -------HhhhcCCCCCccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 0001111111111 144568899999999999999999999864
No 235
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.1e-34 Score=308.86 Aligned_cols=255 Identities=25% Similarity=0.405 Sum_probs=199.1
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc------HHHHHHHHHhcC-C-----CCceeEeeEEE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD------VSSEINILKKIN-H-----SNIIRLSGFCV 424 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~------~~~E~~~l~~l~-H-----~niv~l~g~~~ 424 (669)
.|.+.|+ +|.|.| |.|-++.. .++.||||++|.+ ...|+.+|..|+ | -|+|+++++|.
T Consensus 187 rY~V~e~-LGkGtF-------GQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~ 258 (586)
T KOG0667|consen 187 RYEVLEV-LGKGSF-------GQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFY 258 (586)
T ss_pred EEEEEEE-eccccc-------ceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccc
Confidence 4555665 999999 99999988 4789999999864 346999999997 4 48999999999
Q ss_pred ecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC--CcEE
Q 005923 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN--LRAK 502 (669)
Q Consensus 425 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~--~~~k 502 (669)
..+++|||+|.+.. +|.++|+.++. ..|+...+..|+.||+.||.+||+.+ |||+||||+||||.+- ..+|
T Consensus 259 fr~HlciVfELL~~-NLYellK~n~f---~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vK 331 (586)
T KOG0667|consen 259 FRNHLCIVFELLST-NLYELLKNNKF---RGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIK 331 (586)
T ss_pred cccceeeeehhhhh-hHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCcee
Confidence 99999999999975 99999998753 35999999999999999999999999 9999999999999653 4799
Q ss_pred EcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHH
Q 005923 503 ITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582 (669)
Q Consensus 503 l~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~ 582 (669)
|+|||.|....... .....+..|+|||++.+..|+.+.|+||||||+.||++|...|.|++..+. .
T Consensus 332 VIDFGSSc~~~q~v-----------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQ---l 397 (586)
T KOG0667|consen 332 VIDFGSSCFESQRV-----------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQ---L 397 (586)
T ss_pred EEecccccccCCcc-----------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHH---H
Confidence 99999998764322 245678899999999999999999999999999999999888888764322 2
Q ss_pred HHHHHHHhhhhH-----HhhhhcccCC-----------------------------ccCCCCc-----------HHHHHH
Q 005923 583 ASISRVLEESNV-----REKLRGFIDP-----------------------------SLRNEYP-----------LDLAFS 617 (669)
Q Consensus 583 ~~~~~~~~~~~~-----~~~l~~~~d~-----------------------------~l~~~~~-----------~~~~~~ 617 (669)
..+.+++.-+.. ..+...+++. ......| ......
T Consensus 398 ~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~ 477 (586)
T KOG0667|consen 398 ARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKL 477 (586)
T ss_pred HHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHH
Confidence 223322221110 0011111111 0000011 123345
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 618 MAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 618 l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+.+++++||..||.+|+|..|.+.+
T Consensus 478 F~dflk~~L~~dP~~R~tp~qal~H 502 (586)
T KOG0667|consen 478 FIDFLKRCLEWDPAERITPAQALNH 502 (586)
T ss_pred HHHHHHHHhccCchhcCCHHHHhcC
Confidence 8999999999999999999999876
No 236
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=9.2e-34 Score=297.19 Aligned_cols=257 Identities=25% Similarity=0.397 Sum_probs=194.6
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
..|.+.+ ++|.|+| |.||+|... +..||+|.++. .+.+|+.++++++|+||+++++++..++
T Consensus 6 ~~y~~~~-~lg~g~~-------g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~ 77 (301)
T cd07873 6 ETYIKLD-KLGEGTY-------ATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK 77 (301)
T ss_pred cceEEee-EeccCcC-------EEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCC
Confidence 3455544 4899999 999999874 77899998752 3568999999999999999999999999
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
..++||||++ ++|.+++... ...+++..+..++.|++.||+|||+.+ ++|+||||+|||+++++.+||+|||
T Consensus 78 ~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg 149 (301)
T cd07873 78 SLTLVFEYLD-KDLKQYLDDC----GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFG 149 (301)
T ss_pred eEEEEEeccc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCc
Confidence 9999999997 5999998754 245889999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
+++....... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+....+ ....+.
T Consensus 150 ~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~---~~~~~~ 218 (301)
T cd07873 150 LARAKSIPTK--------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE---QLHFIF 218 (301)
T ss_pred chhccCCCCC--------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHH
Confidence 9976533211 1122356889999999865 457899999999999999999999998654321 112222
Q ss_pred HHHhhhhHHhhhhccc---------CCccCCC----CcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 587 RVLEESNVREKLRGFI---------DPSLRNE----YPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 587 ~~~~~~~~~~~l~~~~---------d~~l~~~----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
..+..... .....++ .+..... ....+...+.+|+.+||+.||.+|||+.|++++
T Consensus 219 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 219 RILGTPTE-ETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred HHcCCCCh-hhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 22111100 0011110 0111111 112345568899999999999999999999863
No 237
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.6e-33 Score=289.94 Aligned_cols=237 Identities=24% Similarity=0.395 Sum_probs=188.7
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
.+|.|.| |.||+|... +..+++|.... .+.+|+.++++++|+||+++++++..++..++|+||+
T Consensus 15 ~lg~g~~-------g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 87 (268)
T cd06624 15 VLGKGTY-------GIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQV 87 (268)
T ss_pred EEecCCc-------eEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecC
Confidence 4899999 999999874 56799998753 3678999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC-CCcEEEcccCCccccC
Q 005923 437 DNGALSDWLHSNRYQTSDNL--TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT-NLRAKITNFGLARSAE 513 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l--~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~-~~~~kl~DfGla~~~~ 513 (669)
++++|.++++... ..+ ++..+..++.|++.||+|||+.+ ++||||||+||+++. ++.+||+|||++....
T Consensus 88 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 88 PGGSLSALLRSKW----GPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred CCCCHHHHHHHhc----ccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 9999999997642 234 78889999999999999999998 999999999999986 6799999999997654
Q ss_pred CCccccCCcccceeeecccccccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV--ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
.... ......++..|+|||++.+.. ++.++||||||+++|||++|+.|+.......... .. .
T Consensus 161 ~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~-~~--~----- 224 (268)
T cd06624 161 GINP--------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM-FK--V----- 224 (268)
T ss_pred cCCC--------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH-hh--h-----
Confidence 3211 112235788999999987644 7899999999999999999999987433211100 00 0
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.. .......+.....++.+++.+||+.+|.+|||+.|++..
T Consensus 225 --------~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 225 --------GM--FKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred --------hh--hccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 00 011123344556678999999999999999999999863
No 238
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.5e-33 Score=290.74 Aligned_cols=241 Identities=25% Similarity=0.433 Sum_probs=191.3
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-----------------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-----------------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-----------------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
.+|.|+| |.||+|.. +|+.+|+|.++. .+.+|+.++++++|+|++++++++...
T Consensus 8 ~lg~g~~-------~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 80 (272)
T cd06629 8 LIGKGTY-------GRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE 80 (272)
T ss_pred eecccCc-------eEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC
Confidence 3899999 99999986 578899998742 256799999999999999999999999
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
+..++||||+++|+|.+++++. ..+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+||
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~ 152 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDF 152 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeec
Confidence 9999999999999999999754 46899999999999999999999998 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV--ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 584 (669)
|+++....... ........++..|+|||.+.... ++.++|+||||+++||+++|..|+......+.
T Consensus 153 ~~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~------ 220 (272)
T cd06629 153 GISKKSDDIYD------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA------ 220 (272)
T ss_pred ccccccccccc------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH------
Confidence 99986543211 11123456788999999987754 89999999999999999999999864332110
Q ss_pred HHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
...... ......+.+ .....++..+.+++.+||+.||.+||++++|+++
T Consensus 221 ~~~~~~-----~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 221 MFKLGN-----KRSAPPIPP----DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred HHHhhc-----cccCCcCCc----cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 000000 001111111 1112345678999999999999999999999864
No 239
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.2e-33 Score=288.59 Aligned_cols=235 Identities=27% Similarity=0.422 Sum_probs=190.1
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec-CceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE-GNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lV~e 434 (669)
++.|.| |.||++.. +++.+++|.+.. .+..|++++++++|+|++++.+.+... ...++|||
T Consensus 8 lg~g~~-------~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 8 VGKGSY-------GEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred ecCCCC-------eEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 788999 99999987 467899998742 356799999999999999999987644 45789999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++++|.+++...+ ...+++.++..++.|++.|++|||+.+ ++||||+|+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~l~~~l~~~~---~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~ 154 (257)
T cd08223 81 FCEGGDLYHKLKEQK---GKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN 154 (257)
T ss_pred ccCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecc
Confidence 999999999997642 345899999999999999999999999 99999999999999999999999999986643
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
... ......++..|+|||.+.+..++.++||||||++++||++|+.||....... . .....
T Consensus 155 ~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~--~----~~~~~----- 215 (257)
T cd08223 155 QCD--------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS--L----VYRII----- 215 (257)
T ss_pred cCC--------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH--H----HHHHH-----
Confidence 221 1223467889999999999999999999999999999999999987543211 0 00000
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
... ....+......+.+++.+||+.||.+||++.|++++
T Consensus 216 ----~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 216 ----EGK-----LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ----hcC-----CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 011 112233455678999999999999999999999864
No 240
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.6e-34 Score=307.15 Aligned_cols=232 Identities=26% Similarity=0.349 Sum_probs=182.8
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHhc---CCCCceeEeeEEEecCceeE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKKI---NHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~l---~H~niv~l~g~~~~~~~~~l 431 (669)
+|.|+| |.||+|... +..+|+|++... +..|..++.+. +||||+++++++..+...++
T Consensus 1 lG~G~~-------g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~l 73 (330)
T cd05586 1 IGKGTF-------GQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYL 73 (330)
T ss_pred CCCCCc-------eEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEE
Confidence 478999 999999874 789999998531 23456666655 69999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
||||+++|+|.+++.+. ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++.
T Consensus 74 v~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~ 145 (330)
T cd05586 74 VTDYMSGGELFWHLQKE-----GRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKA 145 (330)
T ss_pred EEcCCCCChHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcC
Confidence 99999999999999754 45899999999999999999999999 99999999999999999999999999976
Q ss_pred cCCCccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
..... .......||..|+|||.+.+. .++.++|||||||++|||++|+.||.+....+. ... ...
T Consensus 146 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~---~~~---i~~ 211 (330)
T cd05586 146 NLTDN--------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM---YRN---IAF 211 (330)
T ss_pred CCCCC--------CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH---HHH---HHc
Confidence 43221 112345789999999998764 479999999999999999999999986543210 000 000
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC----CHHHHHH
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP----SISEVFV 641 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP----t~~evl~ 641 (669)
. +..+. .......+.+++.+||+.||.+|| ++.|+++
T Consensus 212 -----~------~~~~~---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 212 -----G------KVRFP---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred -----C------CCCCC---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0 00110 012345678999999999999998 5666655
No 241
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.1e-33 Score=289.08 Aligned_cols=238 Identities=30% Similarity=0.524 Sum_probs=190.8
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc---------HHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD---------VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~---------~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
+|.|+| |+||++... ++.+|+|.+... ..+|+.++++++||||+++++++.++...++||||
T Consensus 7 lg~G~~-------g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 7 LGSGGF-------GTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEESS-------EEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred EEeCCC-------EEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccc
Confidence 899999 999999995 457999998642 23489999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||.+......
T Consensus 80 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~ 151 (260)
T PF00069_consen 80 CPGGSLQDYLQKN-----KPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSEN 151 (260)
T ss_dssp ETTEBHHHHHHHH-----SSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTST
T ss_pred ccccccccccccc-----cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 9999999999833 45899999999999999999999999 999999999999999999999999999864111
Q ss_pred ccccCCcccceeeecccccccccccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIE-NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
........++..|+|||.+. +..++.++||||+|+++|+|++|..|+........... +.........
T Consensus 152 --------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~---~~~~~~~~~~ 220 (260)
T PF00069_consen 152 --------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEI---IEKILKRPLP 220 (260)
T ss_dssp --------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHH---HHHHHHTHHH
T ss_pred --------ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhh---hhhccccccc
Confidence 12234467889999999998 88999999999999999999999999986522111111 1111110000
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.. . .........+.+++.+||+.||.+||++.++++
T Consensus 221 ~~-~----------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 221 SS-S----------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HH-T----------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cc-c----------cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 0 000111267999999999999999999999985
No 242
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8e-34 Score=295.26 Aligned_cols=250 Identities=24% Similarity=0.390 Sum_probs=187.1
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhc---CCCCceeEeeEEEec-----
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKI---NHSNIIRLSGFCVHE----- 426 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l---~H~niv~l~g~~~~~----- 426 (669)
++|.|+| |.||++.. +++.+|+|.++. .+.+|+.+++++ +||||+++++++...
T Consensus 7 ~lg~g~~-------g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 7 EIGVGAY-------GTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred EEeecCC-------eEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 4899999 99999988 477899998853 245688877766 699999999998642
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
...++||||+.+ +|.+++... ....+++..+..++.|++.||+|||+.+ ++||||||+|||+++++.+||+||
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKV---PPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcc
Confidence 357999999984 899998754 2245899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
|+++...... ......++..|+|||.+.+..++.++|||||||++|||++|+.+|.+....+ ....+.
T Consensus 153 g~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~---~~~~~~ 220 (288)
T cd07863 153 GLARIYSCQM---------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIF 220 (288)
T ss_pred CccccccCcc---------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH---HHHHHH
Confidence 9998764321 1123467889999999999999999999999999999999999987654321 111111
Q ss_pred HHHhhhhHHhh---h---hcccCCccC---CCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 587 RVLEESNVREK---L---RGFIDPSLR---NEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 587 ~~~~~~~~~~~---l---~~~~d~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
........... . .....+... .....+....+.+++.+||+.||.+|||+.|++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 221 DLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred HHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11111000000 0 000000000 0011234556889999999999999999999985
No 243
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=278.78 Aligned_cols=233 Identities=30% Similarity=0.449 Sum_probs=188.7
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------------cHHHHHHHHHhc-CCCCceeEeeEEEecCc
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------------DVSSEINILKKI-NHSNIIRLSGFCVHEGN 428 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------------~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 428 (669)
+|.|.- ..|-+... .|++.|+|++.. .-.+|+.+|+++ .||+|+.+.++++.+..
T Consensus 25 lgrgvs-------s~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF 97 (411)
T KOG0599|consen 25 LGRGVS-------SVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF 97 (411)
T ss_pred hcccch-------hhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence 555554 33444433 367788887731 245799999998 59999999999999999
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
.++|+|.|+.|.|.|+|... -.++++...+|+.|+++|++|||..+ ||||||||+|||+|++.++||+|||+
T Consensus 98 ~FlVFdl~prGELFDyLts~-----VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 98 VFLVFDLMPRGELFDYLTSK-----VTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred hhhhhhhcccchHHHHhhhh-----eeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEeccce
Confidence 99999999999999999754 46999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeeccccccccccccccc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN------GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~------~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~ 582 (669)
+..+..+. ..+..+||++|+|||.+.. ..|+...|.|+.||+||-|+.|+.||..... +
T Consensus 170 a~~l~~Ge---------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ----m-- 234 (411)
T KOG0599|consen 170 ACQLEPGE---------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ----M-- 234 (411)
T ss_pred eeccCCch---------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH----H--
Confidence 99887654 2456899999999999853 4578899999999999999999999975321 1
Q ss_pred HHHHHHHhhhhHHhhhhcccCCcc--CCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 583 ASISRVLEESNVREKLRGFIDPSL--RNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 583 ~~~~~~~~~~~~~~~l~~~~d~~l--~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
-.++-++...+ +.+.-.+......+|+.+||+.||.+|.|++|++.+
T Consensus 235 -------------lMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 235 -------------LMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred -------------HHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 11122222222 222224666778999999999999999999999875
No 244
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.4e-33 Score=291.40 Aligned_cols=243 Identities=25% Similarity=0.463 Sum_probs=192.8
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-------CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-------GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-------g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
.+|.|+| |.||+|..+ ...+++|.+.. ++.+|++++++++|+||+++++++.+.+..+
T Consensus 12 ~lg~g~~-------g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 12 TLGRGEF-------GEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred eecccce-------eEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 3899999 999999863 35689998742 4678999999999999999999999888999
Q ss_pred EEEEecCCCCHHHHHhcCCCCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 431 LVYEFADNGALSDWLHSNRYQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~~----~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
+||||+++|+|.++++..+... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997653111 126899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 585 (669)
|+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||....... . ...
T Consensus 162 ~~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--~-~~~- 230 (275)
T cd05046 162 SLSKDVYNSEY-------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--V-LNR- 230 (275)
T ss_pred ccccccCcccc-------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--H-HHH-
Confidence 99875533221 11223356778999999998889999999999999999999 777876433211 0 000
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
. . ...+....+..++..+.+++.+||+.||.+||++.|++..|+
T Consensus 231 --~-~------------~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 231 --L-Q------------AGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred --H-H------------cCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 0 0 001111122344567899999999999999999999999886
No 245
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.1e-34 Score=308.88 Aligned_cols=245 Identities=22% Similarity=0.290 Sum_probs=190.9
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
..|++.+ .+|.|+| |.||++..+ ++.+|+|+++. .+.+|+.+++.++||||+++++++..
T Consensus 43 ~~y~i~~-~lG~G~f-------g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 43 EDYEVVK-VIGRGAF-------GEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred hhcEEEE-EEeecCC-------eEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3455444 3899999 999999984 67899999852 24578999999999999999999999
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcc
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 505 (669)
++..++||||+++|+|.++++.. .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~D 185 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLAD 185 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEe
Confidence 99999999999999999999753 3788899999999999999999999 99999999999999999999999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG----VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELL 581 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~ 581 (669)
||+++....... .......||..|+|||++.+. .++.++|||||||++|||++|+.||.+......
T Consensus 186 fG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~--- 255 (371)
T cd05622 186 FGTCMKMNKEGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT--- 255 (371)
T ss_pred CCceeEcCcCCc-------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH---
Confidence 999987643221 112345799999999999754 378999999999999999999999986543211
Q ss_pred HHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHH
Q 005923 582 YASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNA--RPSISEVFVTL 643 (669)
Q Consensus 582 ~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~L 643 (669)
...++.. . ..+..+........+.+++.+|+..++.+ ||++.|++++.
T Consensus 256 ---~~~i~~~----------~-~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 256 ---YSKIMNH----------K-NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred ---HHHHHcC----------C-CcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 1111110 0 00111112234567889999999844433 78899888764
No 246
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.9e-33 Score=288.94 Aligned_cols=242 Identities=24% Similarity=0.347 Sum_probs=190.6
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc------------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG------------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~------------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
|++.++ ++.|.| |.||+|.. .+..|++|.++. .+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~~~-l~~g~~-------g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 75 (265)
T cd06652 4 WRLGKL-LGQGAF-------GRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRD 75 (265)
T ss_pred ceEeeE-EecCCc-------eEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEecc
Confidence 444443 889999 99999987 478899998741 25579999999999999999998866
Q ss_pred c--CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEE
Q 005923 426 E--GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKI 503 (669)
Q Consensus 426 ~--~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl 503 (669)
. ...++||||+++|+|.+++... ..+++...++++.|++.||+|||+.+ ++|+||||+||+++.++.+||
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l 147 (265)
T cd06652 76 PMERTLSIFMEHMPGGSIKDQLKSY-----GALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKL 147 (265)
T ss_pred CCCceEEEEEEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEE
Confidence 4 4578999999999999999754 34889999999999999999999999 999999999999999999999
Q ss_pred cccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 504 TNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 504 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
+|||+++........ ........++..|+|||.+.+..++.++||||||+++|||++|+.||.......
T Consensus 148 ~Dfg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------ 216 (265)
T cd06652 148 GDFGASKRLQTICLS-----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA------ 216 (265)
T ss_pred CcCcccccccccccc-----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH------
Confidence 999999865432110 011233468889999999999899999999999999999999999987532211
Q ss_pred HHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+... .........|......+.+++.+||. +|.+||+++||++.
T Consensus 217 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 217 AIFKI-------------ATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred HHHHH-------------hcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 00000 00011223455566678899999995 99999999999853
No 247
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.3e-33 Score=314.48 Aligned_cols=253 Identities=21% Similarity=0.338 Sum_probs=185.9
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc------cHHHHHHHHHhcCC------CCceeEeeEEE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG------DVSSEINILKKINH------SNIIRLSGFCV 424 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~------~~~~E~~~l~~l~H------~niv~l~g~~~ 424 (669)
.|++.+ ++|.|+| |+||++.. .++.||||+++. ++..|++++++++| .+++++++++.
T Consensus 130 ~y~i~~-~lG~G~f-------g~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 130 RFKILS-LLGEGTF-------GKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred cEEEEE-EEEeccC-------EEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 455555 3899999 99999987 467899999863 34568888888765 45888999887
Q ss_pred ec-CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeeecCCC---
Q 005923 425 HE-GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLKTSNILLDTNL--- 499 (669)
Q Consensus 425 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~-~~~~~ivHrDik~~NILl~~~~--- 499 (669)
.+ ++.++|||++ +++|.+++.+. +.+++..+..|+.||+.||+|||+ .+ |+||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKH-----GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVV 272 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCccc
Confidence 54 4678999988 67999998754 359999999999999999999998 48 99999999999998765
Q ss_pred -------------cEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcC
Q 005923 500 -------------RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566 (669)
Q Consensus 500 -------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg 566 (669)
.+||+|||++...... .....||..|+|||++.+..++.++|||||||++|||++|
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~~~-----------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG 341 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDERHS-----------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTG 341 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCccc-----------cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhC
Confidence 4999999987643221 2235789999999999999999999999999999999999
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhh---hH----Hhhhhccc------CCccCC-----------CCcHHHHHHHHHHH
Q 005923 567 REAVTGDQNCEAELLYASISRVLEES---NV----REKLRGFI------DPSLRN-----------EYPLDLAFSMAQLA 622 (669)
Q Consensus 567 ~~p~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~l~~~~------d~~l~~-----------~~~~~~~~~l~~li 622 (669)
+.||.+....+.... +...+... .. ....+.+. ++.... .........+.+|+
T Consensus 342 ~~pf~~~~~~~~~~~---i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli 418 (467)
T PTZ00284 342 KLLYDTHDNLEHLHL---MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLI 418 (467)
T ss_pred CCCCCCCChHHHHHH---HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHH
Confidence 999987554322111 11111100 00 00000000 000000 00001134578999
Q ss_pred HHhcccCCCCCCCHHHHHHH
Q 005923 623 KNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 623 ~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+||+.||.+|||++|++++
T Consensus 419 ~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 419 YGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred HHhCCcChhhCCCHHHHhcC
Confidence 99999999999999999974
No 248
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.9e-33 Score=287.07 Aligned_cols=236 Identities=23% Similarity=0.343 Sum_probs=192.6
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
+|.|.| |.||.+.. +++.+++|.+.. ++.+|++++++++|+||+++++++.+++..+++|||
T Consensus 8 ig~g~~-------g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 8 LGKGAF-------GEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred ecccCC-------ceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 799999 87776665 578899998642 367899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+++|+|.+++...+ ...+++.++..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~ 154 (256)
T cd08221 81 ANGGTLYDKIVRQK---GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE 154 (256)
T ss_pred cCCCcHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence 99999999997642 346899999999999999999999998 999999999999999999999999999876443
Q ss_pred ccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (669)
.. ......++..|+|||.+.+..++.++||||||+++|||++|..||......+ ......
T Consensus 155 ~~--------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~~~~~------ 214 (256)
T cd08221 155 YS--------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN------LVVKIV------ 214 (256)
T ss_pred cc--------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHH------
Confidence 21 1223568899999999998889999999999999999999999987543211 000010
Q ss_pred hhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 596 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
...+ ...+...+.++.+++.+||+.+|.+||++.|+++.+
T Consensus 215 -------~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 215 -------QGNY-TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred -------cCCC-CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 0011 112234456789999999999999999999998753
No 249
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.7e-33 Score=290.21 Aligned_cols=243 Identities=27% Similarity=0.438 Sum_probs=194.6
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
.|.+.+ +++.|.| |.||++..+ +..+|+|..+. ++..|++++++++|+||+++++++..++..
T Consensus 6 ~~~i~~-~l~~g~~-------~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 77 (280)
T cd06611 6 IWEIIG-ELGDGAF-------GKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKL 77 (280)
T ss_pred HHHHHH-HhcCCCC-------ceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Confidence 355555 4899999 999999984 77899998853 366799999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+++++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++
T Consensus 78 ~lv~e~~~~~~L~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 78 WILIEFCDGGALDSIMLEL----ERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred EEEeeccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccc
Confidence 9999999999999998754 245999999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCccccCCcccceeeecccccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE-----NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 584 (669)
....... .......++..|+|||.+. ...++.++||||||+++|||++|+.||....... .
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~------~ 216 (280)
T cd06611 151 AKNKSTL--------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR------V 216 (280)
T ss_pred hhhcccc--------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH------H
Confidence 7654321 1122346888999999985 3457789999999999999999999997543211 0
Q ss_pred HHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+... .....+. ...+......+.+++.+||+.||.+||++.++++.
T Consensus 217 ~~~~----------~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 217 LLKI----------LKSEPPT--LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHH----------hcCCCCC--cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0000 0000011 11233445678999999999999999999999865
No 250
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.4e-33 Score=285.93 Aligned_cols=243 Identities=25% Similarity=0.427 Sum_probs=194.6
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
|++.+ .++.|.| |.||++... ++.+++|.++. .+.+|++++++++||||+++++++..++..+
T Consensus 5 ~~~~~-~l~~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~ 76 (262)
T cd06613 5 YELIQ-RIGSGTY-------GDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLW 76 (262)
T ss_pred eEEEE-EecCCCc-------eEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEE
Confidence 44444 3899999 999999873 67899998753 3678999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcc
Q 005923 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR 510 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~ 510 (669)
++|||+++++|.+++...+ ..+++.++..++.|++.||.|||+++ ++|+||+|+||++++++.+||+|||++.
T Consensus 77 l~~e~~~~~~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 149 (262)
T cd06613 77 IVMEYCGGGSLQDIYQVTR----GPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSA 149 (262)
T ss_pred EEEeCCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccch
Confidence 9999999999999987542 45899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCccccCCcccceeeecccccccccccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG---VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
...... .......++..|+|||.+.+. .++.++||||||+++|||++|+.|+.......... .
T Consensus 150 ~~~~~~--------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~--~---- 215 (262)
T cd06613 150 QLTATI--------AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF--L---- 215 (262)
T ss_pred hhhhhh--------hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH--H----
Confidence 654321 112234678899999999877 88999999999999999999999997644321100 0
Q ss_pred HHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 588 VLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 588 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
. ....+..+.+ ..+...+.++.+++.+||..||.+|||+.+|+.
T Consensus 216 ~--------~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 216 I--------SKSNFPPPKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred H--------HhccCCCccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 0000111111 123344567899999999999999999999975
No 251
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.9e-33 Score=290.29 Aligned_cols=243 Identities=25% Similarity=0.410 Sum_probs=192.0
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
.|++.+ ++|.|.| |.||+|..+ +..+++|.++. ++.+|+.++++++|+||+++++++..++..
T Consensus 13 ~y~i~~-~lg~g~~-------g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (292)
T cd06644 13 VWEIIG-ELGDGAF-------GKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKL 84 (292)
T ss_pred hhhhhh-eecCCCC-------eEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeE
Confidence 455544 4899999 999999984 67899999853 356799999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+++++|..++.+. ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++
T Consensus 85 ~lv~e~~~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~ 157 (292)
T cd06644 85 WIMIEFCPGGAVDAIMLEL----DRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVS 157 (292)
T ss_pred EEEEecCCCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccc
Confidence 9999999999999888643 245899999999999999999999998 999999999999999999999999998
Q ss_pred cccCCCccccCCcccceeeecccccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE-----NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 584 (669)
....... .......++..|+|||.+. ...++.++|||||||++|||++|+.|+....... .
T Consensus 158 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------~ 223 (292)
T cd06644 158 AKNVKTL--------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------V 223 (292)
T ss_pred eeccccc--------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH------H
Confidence 7643221 1112345788999999985 3457889999999999999999999987543211 0
Q ss_pred HHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.... .....+. ...+.....++.+++.+||+.||.+||++.|+++.
T Consensus 224 ~~~~----------~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 224 LLKI----------AKSEPPT--LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred HHHH----------hcCCCcc--CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000 0001111 11233445578999999999999999999999763
No 252
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-33 Score=303.82 Aligned_cols=254 Identities=24% Similarity=0.343 Sum_probs=190.8
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
..|++.+ .+|.|+| |.||++.. .++.+|||+++. ++.+|+.+++.++||||+++++++...
T Consensus 24 ~~y~~~~-~lg~G~~-------g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~ 95 (364)
T cd07875 24 KRYQNLK-PIGSGAQ-------GIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQ 95 (364)
T ss_pred cceeEEE-EeecCCC-------eEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccc
Confidence 4555555 3899999 99999987 477899999853 355799999999999999999987643
Q ss_pred ------CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCc
Q 005923 427 ------GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLR 500 (669)
Q Consensus 427 ------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~ 500 (669)
...++||||+++ +|.+++.. .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.
T Consensus 96 ~~~~~~~~~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~ 164 (364)
T cd07875 96 KSLEEFQDVYIVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCT 164 (364)
T ss_pred ccccccCeEEEEEeCCCC-CHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCc
Confidence 356999999975 78888753 3889999999999999999999999 999999999999999999
Q ss_pred EEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHH
Q 005923 501 AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580 (669)
Q Consensus 501 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~ 580 (669)
+||+|||+++...... ......+|..|+|||.+.+..++.++|||||||++|||++|+.||.+....+..
T Consensus 165 ~kL~DfG~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~- 234 (364)
T cd07875 165 LKILDFGLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW- 234 (364)
T ss_pred EEEEeCCCccccCCCC---------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHH-
Confidence 9999999998654321 123356899999999999999999999999999999999999999865532211
Q ss_pred HHHHHHHHHhhhh--H----HhhhhcccC--C------------cc----CCCCcHHHHHHHHHHHHHhcccCCCCCCCH
Q 005923 581 LYASISRVLEESN--V----REKLRGFID--P------------SL----RNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636 (669)
Q Consensus 581 ~~~~~~~~~~~~~--~----~~~l~~~~d--~------------~l----~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 636 (669)
..+...+.... . ...+...+. + .. ...........+.+|+.+||+.||.+|||+
T Consensus 235 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~ 312 (364)
T cd07875 235 --NKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312 (364)
T ss_pred --HHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCH
Confidence 11111100000 0 000000000 0 00 001111123467899999999999999999
Q ss_pred HHHHHH
Q 005923 637 SEVFVT 642 (669)
Q Consensus 637 ~evl~~ 642 (669)
.|++++
T Consensus 313 ~e~L~h 318 (364)
T cd07875 313 DEALQH 318 (364)
T ss_pred HHHhcC
Confidence 999885
No 253
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.3e-33 Score=288.42 Aligned_cols=236 Identities=25% Similarity=0.417 Sum_probs=194.2
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
.+|.|.| |.+|++.. +|..+++|.++. ++.+|+.++++++|+||+++++++..++..++|||
T Consensus 7 ~lg~g~~-------g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 7 KIGEGSF-------GKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred EeccCCc-------eEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 3899999 99999887 578899998742 46789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++++|.+++.... ...+++.++++++.|++.||.|||+.+ ++|+||+|+|||++.++.++|+|||++.....
T Consensus 80 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 80 YCEGGDLYKKINAQR---GVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS 153 (256)
T ss_pred cCCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence 999999999997542 235889999999999999999999998 99999999999999999999999999986643
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
... ......|+..|+|||.+.++.++.++|+||||++++||++|+.|+......+ . ...
T Consensus 154 ~~~--------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~--~----~~~------- 212 (256)
T cd08218 154 TVE--------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN--L----VLK------- 212 (256)
T ss_pred chh--------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH--H----HHH-------
Confidence 221 1223457889999999999999999999999999999999999987543211 0 000
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+... ....+......+.+++.+||+.+|.+||++.||+++
T Consensus 213 --~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 213 --IIRGS-----YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred --HhcCC-----CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 01111 112334556678999999999999999999999874
No 254
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.6e-34 Score=308.30 Aligned_cols=243 Identities=23% Similarity=0.357 Sum_probs=187.3
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|+| |.||++.. .++.+|+|+++. .+..|+.++.+++|+||+++++.+.+++..++|||
T Consensus 9 lG~G~~-------g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 9 IGRGAF-------GEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred EeeCCC-------EEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 899999 99999988 478899999853 25579999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++|+|.+++.+. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 82 FLPGGDMMTLLMKK-----DTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred CCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999999754 35899999999999999999999999 99999999999999999999999999875532
Q ss_pred CccccC---------------------------CcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCC
Q 005923 515 DEHEQG---------------------------GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567 (669)
Q Consensus 515 ~~~~~~---------------------------~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~ 567 (669)
...... ...........||..|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 110000 00001122357999999999999999999999999999999999999
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 005923 568 EAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS---ISEVFVT 642 (669)
Q Consensus 568 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt---~~evl~~ 642 (669)
.||.+....+. .. .+.. . ...+..+.......++.+++.+|+. ||.+|++ +.|++++
T Consensus 234 ~Pf~~~~~~~~---~~---~i~~----------~-~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 234 PPFCSETPQET---YR---KVMN----------W-KETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCCCHHHH---HH---HHHc----------C-CCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 99986543211 00 0100 0 0000000011234567888888774 9999996 5565544
No 255
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=7.3e-34 Score=305.25 Aligned_cols=254 Identities=24% Similarity=0.338 Sum_probs=190.8
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
..|.+.+ .+|.|+| |.||++.. .++.+|||.++. .+.+|+.+++.++||||+++++++...
T Consensus 17 ~~y~~~~-~lg~G~~-------g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 88 (355)
T cd07874 17 KRYQNLK-PIGSGAQ-------GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 88 (355)
T ss_pred hceeEEE-EeeecCC-------EEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecc
Confidence 4455544 3899999 99999986 478899998853 345799999999999999999998644
Q ss_pred C------ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCc
Q 005923 427 G------NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLR 500 (669)
Q Consensus 427 ~------~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~ 500 (669)
. ..++||||+++ +|.+++.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.
T Consensus 89 ~~~~~~~~~~lv~e~~~~-~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~ 157 (355)
T cd07874 89 KSLEEFQDVYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCT 157 (355)
T ss_pred ccccccceeEEEhhhhcc-cHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCC
Confidence 2 46999999975 78777753 3889999999999999999999999 999999999999999999
Q ss_pred EEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHH
Q 005923 501 AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580 (669)
Q Consensus 501 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~ 580 (669)
+||+|||+++...... ......||..|+|||.+.+..++.++|||||||++|||++|+.||.+....+..
T Consensus 158 ~kl~Dfg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~- 227 (355)
T cd07874 158 LKILDFGLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW- 227 (355)
T ss_pred EEEeeCcccccCCCcc---------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-
Confidence 9999999998654321 122356899999999999999999999999999999999999999865432211
Q ss_pred HHHHHHHHHhhhh------HHhhhhcccC----------Cc-----c---CCCCcHHHHHHHHHHHHHhcccCCCCCCCH
Q 005923 581 LYASISRVLEESN------VREKLRGFID----------PS-----L---RNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636 (669)
Q Consensus 581 ~~~~~~~~~~~~~------~~~~l~~~~d----------~~-----l---~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 636 (669)
..+...+.... ....+..+++ +. + ....+......+.+|+.+||+.||.+|||+
T Consensus 228 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~ 305 (355)
T cd07874 228 --NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305 (355)
T ss_pred --HHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCH
Confidence 11111100000 0000000000 00 0 001112234568999999999999999999
Q ss_pred HHHHHH
Q 005923 637 SEVFVT 642 (669)
Q Consensus 637 ~evl~~ 642 (669)
.|++++
T Consensus 306 ~ell~h 311 (355)
T cd07874 306 DEALQH 311 (355)
T ss_pred HHHhcC
Confidence 999986
No 256
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.5e-33 Score=291.28 Aligned_cols=247 Identities=25% Similarity=0.441 Sum_probs=191.4
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc------cHHHHHHHHHhc-CCCCceeEeeEEEe----
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG------DVSSEINILKKI-NHSNIIRLSGFCVH---- 425 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~------~~~~E~~~l~~l-~H~niv~l~g~~~~---- 425 (669)
.|++.+ .+++|+| |.||++.. .++.+|+|..+. ++..|+.+++++ +|+||+++++++..
T Consensus 19 ~~~~~~-~lg~g~~-------~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 19 TWEIIE-TIGKGTY-------GKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred ceeeee-eeccCCC-------cEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 455555 4899999 99999987 477899998753 466799999999 69999999999853
Q ss_pred -cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc
Q 005923 426 -EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504 (669)
Q Consensus 426 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 504 (669)
++..++||||+++|+|.++++... .....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFL-KRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhh-ccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEEc
Confidence 346899999999999999986432 22356899999999999999999999998 9999999999999999999999
Q ss_pred ccCCccccCCCccccCCcccceeeeccccccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-----GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~ 579 (669)
|||+++....... ......|+..|+|||.+.. ..++.++|||||||++|||++|+.|+........
T Consensus 167 dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~- 237 (286)
T cd06638 167 DFGVSAQLTSTRL--------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA- 237 (286)
T ss_pred cCCceeecccCCC--------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-
Confidence 9999986643211 1123468899999999853 4578899999999999999999999875432110
Q ss_pred HHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
+. .......+.+ ..+......+.+++.+||+.||.+|||+.|+++.+
T Consensus 238 -----~~----------~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 238 -----LF----------KIPRNPPPTL--HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred -----Hh----------hccccCCCcc--cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 00 0000000111 11222345689999999999999999999998753
No 257
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2e-33 Score=287.49 Aligned_cols=238 Identities=26% Similarity=0.411 Sum_probs=192.5
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEe--cCceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVH--EGNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV 432 (669)
.++.|+| |.||++.. .+..+++|.++. .+..|++++++++|+||+++++++.. +...+++
T Consensus 7 ~lg~g~~-------~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 7 TIGKGSF-------GTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred eeccCCC-------eEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 3789999 99999987 467899998752 35679999999999999999998764 3457999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-----hCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH-----KYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH-----~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
|||+++++|.+++...+ .....+++..++.++.|++.||+||| +.+ ++|+||+|+||++++++.+||+|||
T Consensus 80 ~e~~~~~~L~~~l~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g 155 (265)
T cd08217 80 MEYCEGGDLAQLIQKCK-KERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFG 155 (265)
T ss_pred ehhccCCCHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEeccc
Confidence 99999999999997642 23457999999999999999999999 666 9999999999999999999999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
++........ ......++..|+|||.+.+..++.++||||||+++|+|++|+.|+......+ ...
T Consensus 156 ~~~~~~~~~~--------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~---- 220 (265)
T cd08217 156 LAKILGHDSS--------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ---LAS---- 220 (265)
T ss_pred ccccccCCcc--------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH---HHH----
Confidence 9987654321 1233468899999999999999999999999999999999999998644211 100
Q ss_pred HHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 588 VLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 588 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+.. ......+...+..+.+++.+||+.+|.+||++.+|+++
T Consensus 221 ---------~~~~----~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 221 ---------KIKE----GKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ---------HHhc----CCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0111 11122344456678999999999999999999999864
No 258
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.9e-33 Score=293.68 Aligned_cols=235 Identities=24% Similarity=0.431 Sum_probs=192.2
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
++|.|+| |.||++.. ++..+|||.++. .+.+|+.++++++|+||+++++.+..++..++||||+
T Consensus 29 ~lg~g~~-------g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 29 KIGEGST-------GIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred cccCCCC-------eEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 5899999 99999987 478899998753 3668999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
++++|.+++... .+++..+..++.||+.||+|||+.+ ++||||||+||++++++.+||+|||++.......
T Consensus 102 ~~~~L~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~ 172 (292)
T cd06658 102 EGGALTDIVTHT------RMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV 172 (292)
T ss_pred CCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccc
Confidence 999999998543 4889999999999999999999998 9999999999999999999999999987653322
Q ss_pred cccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHh
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVRE 596 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (669)
. ......++..|+|||.+.+..++.++||||||+++|||++|+.||........ +.
T Consensus 173 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~------~~---------- 228 (292)
T cd06658 173 P--------KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA------MR---------- 228 (292)
T ss_pred c--------cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HH----------
Confidence 1 12234688999999999998999999999999999999999999986443211 00
Q ss_pred hhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 597 KLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 597 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+...+.+.... .......+.+++.+||..||.+|||+.|+++.
T Consensus 229 ~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 229 RIRDNLPPRVKD--SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHhcCCCcccc--ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 011111111111 11234568899999999999999999999975
No 259
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.4e-33 Score=288.21 Aligned_cols=241 Identities=22% Similarity=0.401 Sum_probs=194.0
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------------cHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------------DVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
.+|+|.| |.||++.. +++.+|+|.++. ++..|++++++++|+||+++++++.+.+..+
T Consensus 7 ~lg~g~~-------~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 7 QLGTGAF-------SSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFN 79 (268)
T ss_pred eecCcCc-------eEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEE
Confidence 3899999 99999986 578899998852 3667999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC-cEEEcccCCc
Q 005923 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL-RAKITNFGLA 509 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~-~~kl~DfGla 509 (669)
+||||+++++|.+++.+. ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++ .+||+|||++
T Consensus 80 ~v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~ 151 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKY-----GAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAA 151 (268)
T ss_pred EEEeccCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccc
Confidence 999999999999999754 35899999999999999999999999 99999999999998775 6999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 589 (669)
.......... ........++..|+|||.+.+..++.++||||+|++++||++|+.||.......... .+
T Consensus 152 ~~~~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~---~~---- 220 (268)
T cd06630 152 ARLAAKGTGA----GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA---LI---- 220 (268)
T ss_pred cccccccccC----CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH---HH----
Confidence 8765432110 111233568889999999998899999999999999999999999987433211000 00
Q ss_pred hhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 590 EESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 590 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
............+......+.+++.+||+.+|.+||++.|++.
T Consensus 221 ---------~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 221 ---------FKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ---------HHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0000011123345556678999999999999999999999985
No 260
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.9e-33 Score=289.91 Aligned_cols=238 Identities=24% Similarity=0.462 Sum_probs=191.5
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
.+|.|+| |.||++..+ +..+|+|.++. .+.+|++++++++|+||+++++.+..++..++||||
T Consensus 8 ~ig~g~~-------g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 8 ELGKGNY-------GSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred hhcccCC-------eEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 4899999 999999985 78899998753 366799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~-~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
+++++|.++++... ....+++..+..++.|++.||.|||+ .+ ++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 155 (286)
T cd06622 81 MDAGSLDKLYAGGV--ATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA 155 (286)
T ss_pred cCCCCHHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccC
Confidence 99999999987541 23468999999999999999999997 46 99999999999999999999999999976532
Q ss_pred CccccCCcccceeeecccccccccccccccCC------CCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV------ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~------~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
.. .....++..|+|||.+.+.. ++.++|+|||||++|||++|+.||....... ....
T Consensus 156 ~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~---- 218 (286)
T cd06622 156 SL----------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN---IFAQ---- 218 (286)
T ss_pred Cc----------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh---HHHH----
Confidence 21 22345788999999986543 4889999999999999999999997533211 0011
Q ss_pred HhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 589 LEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 589 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+..+.+. .....+.++...+.+++.+||+.+|.+||++.+++..
T Consensus 219 ---------~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 219 ---------LSAIVDG-DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred ---------HHHHhhc-CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1111111 1122344566778999999999999999999999874
No 261
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=278.52 Aligned_cols=241 Identities=25% Similarity=0.391 Sum_probs=191.4
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEec---------ccHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMK---------GDVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~---------~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
.|.+.|. +|.|.| ..|++... .|+.+|+|++. +++.+|+.|.+.++|||||+|.....+++
T Consensus 12 ~y~l~e~-igkG~F-------SvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~ 83 (355)
T KOG0033|consen 12 NYDVKEE-LGKGAF-------SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES 83 (355)
T ss_pred hhhHHHH-HccCch-------HHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccc
Confidence 5666674 999999 55555544 46777777653 35778999999999999999999999999
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC---CCcEEEc
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT---NLRAKIT 504 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~---~~~~kl~ 504 (669)
..|||+|+|.||+|..-+-.+ ...++...-+.+.||+++|.|+|.++ |||||+||+|+|+.+ .--+|++
T Consensus 84 ~~ylvFe~m~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~ 155 (355)
T KOG0033|consen 84 FHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLA 155 (355)
T ss_pred eeEEEEecccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeec
Confidence 999999999999997766433 34778888999999999999999999 999999999999954 3458999
Q ss_pred ccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 584 (669)
|||+|..+..+. .-....||++|||||++...+|+..+|||+.||+||-|+.|..||.++... .+++.
T Consensus 156 ~FGvAi~l~~g~---------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~---rlye~ 223 (355)
T KOG0033|consen 156 DFGLAIEVNDGE---------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYEQ 223 (355)
T ss_pred ccceEEEeCCcc---------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH---HHHHH
Confidence 999999887332 223468999999999999999999999999999999999999999985432 22222
Q ss_pred HHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
+. ..-.| +..++-....++..+|+++||..||.+|.|+.|.+.
T Consensus 224 I~------------~g~yd--~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 224 IK------------AGAYD--YPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred Hh------------ccccC--CCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 21 11111 112222345567899999999999999999998764
No 262
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.7e-33 Score=290.93 Aligned_cols=246 Identities=26% Similarity=0.451 Sum_probs=191.4
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc------cHHHHHHHHHhc-CCCCceeEeeEEEec---
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG------DVSSEINILKKI-NHSNIIRLSGFCVHE--- 426 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~------~~~~E~~~l~~l-~H~niv~l~g~~~~~--- 426 (669)
.|.+.+ .++.|.| |.||++.. .++.+|+|.+.. .+.+|+.++.++ +|||++++++++...
T Consensus 23 ~y~~~~-~l~~g~~-------~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 23 TWEIIE-TIGKGTY-------GKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CeEEEE-EeecCCC-------eEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence 455555 4899999 99999988 477899998853 356799999999 899999999998754
Q ss_pred --CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc
Q 005923 427 --GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504 (669)
Q Consensus 427 --~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 504 (669)
+..++||||+++|+|.++++... .....+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~kl~ 170 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGLL-ICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVKLV 170 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHhh-hcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEe
Confidence 35799999999999999987532 22356899999999999999999999998 9999999999999999999999
Q ss_pred ccCCccccCCCccccCCcccceeeecccccccccccccccC-----CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-----VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~ 579 (669)
|||+++....... ......++..|+|||.+... .++.++|||||||++|||++|+.|+......+.
T Consensus 171 dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~- 241 (291)
T cd06639 171 DFGVSAQLTSTRL--------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT- 241 (291)
T ss_pred ecccchhcccccc--------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-
Confidence 9999987643221 11224578899999998653 368899999999999999999999975432111
Q ss_pred HHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+.... ....+.+ ..+......+.+++.+||+.||.+||++.|++++
T Consensus 242 -----~~~~~----------~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 242 -----LFKIP----------RNPPPTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred -----HHHHh----------cCCCCCC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00000 0000111 1223344578999999999999999999999864
No 263
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.3e-33 Score=284.91 Aligned_cols=238 Identities=33% Similarity=0.593 Sum_probs=192.5
Q ss_pred HHHhCCCCcccceeeEEEEEEECC------CeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKG------DDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g------~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
.+|.|+| |.||++.... ..+|+|.++. .+..|+.++++++|+||+++++++.+.+..++
T Consensus 6 ~lg~g~~-------g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 6 KLGEGAF-------GEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred eeccCCC-------cceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 4899999 9999999864 7799999863 35679999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
+|||+++++|.+++.... ...+++.++..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||+++.
T Consensus 79 i~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~ 152 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNR---PKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRD 152 (258)
T ss_pred EEeccCCCCHHHHHHhhh---hccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCcee
Confidence 999999999999997642 122899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
........ .....++..|+|||.+.+..++.++||||+|++++||++ |..|+....... ....
T Consensus 153 ~~~~~~~~-------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~---~~~~------ 216 (258)
T smart00219 153 LYDDDYYK-------KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE---VLEY------ 216 (258)
T ss_pred cccccccc-------cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH------
Confidence 65432111 112336789999999988899999999999999999998 777776533211 0000
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
+.. ......+...+.++.+++.+||..||.+|||+.|+++.|
T Consensus 217 -------~~~----~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 217 -------LKK----GYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -------Hhc----CCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 000 001122233566789999999999999999999998764
No 264
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.2e-33 Score=300.63 Aligned_cols=240 Identities=23% Similarity=0.327 Sum_probs=187.3
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
++|.|+| |.||+++.. ++.+|+|.++. .+..|..++..++|+||+++++++.+++..|+||
T Consensus 8 ~lG~G~f-------g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 8 VIGRGAF-------GEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred EEeeCCC-------eEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4899999 999999874 67899998853 2567889999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.++++.. ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 Ey~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 153 (331)
T cd05624 81 DYYVGGDLLTLLSKF----EDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMN 153 (331)
T ss_pred eCCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence 999999999999763 245899999999999999999999999 9999999999999999999999999998664
Q ss_pred CCccccCCcccceeeeccccccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-----GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
.... .......||..|+|||++.+ +.++.++||||||+++|||++|+.||......+. ....
T Consensus 154 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~------~~~i 220 (331)
T cd05624 154 QDGT-------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKI 220 (331)
T ss_pred CCCc-------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH------HHHH
Confidence 3321 11223568999999999875 5688999999999999999999999986543211 1111
Q ss_pred HhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 005923 589 LEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNA--RPSISEVFVT 642 (669)
Q Consensus 589 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~ 642 (669)
.... . .+ .+ .....+.+..+.+++.+|+..++.+ |+++++++++
T Consensus 221 ~~~~-----~-~~---~~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 221 MNHE-----E-RF---QF-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred HcCC-----C-cc---cC-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 1000 0 00 00 0111234567889999999865544 4688888764
No 265
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2e-33 Score=286.53 Aligned_cols=234 Identities=25% Similarity=0.371 Sum_probs=190.9
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
+|.|.| |.||++.. .++.+++|.+.. .+.+|++++++++|||++++++.+..++..++||||
T Consensus 8 lg~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 8 VGRGAF-------GIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred ecccCc-------eEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 789999 99999887 477899998742 367899999999999999999999988999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC-CcEEEcccCCccccCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN-LRAKITNFGLARSAES 514 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~-~~~kl~DfGla~~~~~ 514 (669)
+++++|.+++.... ...+++..+.+++.+++.||+|||+++ ++|+||+|+||+++++ +.+||+|||++.....
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 81 APGGTLAEYIQKRC---NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSS 154 (256)
T ss_pred CCCCCHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence 99999999997642 345899999999999999999999999 9999999999999865 5689999999987643
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
... .....++..|+|||.+.+..++.++||||||+++|||++|+.||....... . .....
T Consensus 155 ~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--~----~~~~~----- 214 (256)
T cd08220 155 KSK---------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--L----VLKIM----- 214 (256)
T ss_pred Ccc---------ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--H----HHHHH-----
Confidence 321 122467889999999999999999999999999999999999987543211 0 00000
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. ......+......+.+++.+||+.||.+|||++|++..
T Consensus 215 ----~-----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 215 ----S-----GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ----h-----cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0 00112233455678999999999999999999999863
No 266
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.1e-34 Score=303.69 Aligned_cols=241 Identities=27% Similarity=0.443 Sum_probs=191.7
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEE---EE---ec-----ccHHHHHHHHHhcCCCCceeEeeEEE
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAV---KV---MK-----GDVSSEINILKKINHSNIIRLSGFCV 424 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vav---K~---~~-----~~~~~E~~~l~~l~H~niv~l~g~~~ 424 (669)
+..+|.+ .+|.|.| -+||||... |-+||- |. .+ ..|..|+.+|+.|+|+||++++.++.
T Consensus 40 Ry~k~~e-vLGrGaf-------KtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~ 111 (632)
T KOG0584|consen 40 RYLKFDE-VLGRGAF-------KTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWV 111 (632)
T ss_pred ceeehhh-hcccccc-------eeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeehee
Confidence 4456666 4999999 899999985 555552 21 11 35778999999999999999999998
Q ss_pred ecCc--eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC-CcE
Q 005923 425 HEGN--TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN-LRA 501 (669)
Q Consensus 425 ~~~~--~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~-~~~ 501 (669)
+... .-+|.|.+..|+|+.|+++.+ .++.+.+..|++||++||.|||++ .|||+|||||..||||+.+ |.+
T Consensus 112 d~~n~~in~iTEL~TSGtLr~Y~kk~~-----~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~V 185 (632)
T KOG0584|consen 112 DTDNKTINFITELFTSGTLREYRKKHR-----RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEV 185 (632)
T ss_pred cCCCceeeeeeecccCCcHHHHHHHhc-----cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCce
Confidence 7655 788999999999999998873 588899999999999999999998 5999999999999999765 899
Q ss_pred EEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHH
Q 005923 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELL 581 (669)
Q Consensus 502 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~ 581 (669)
||+|+|||....... ..++.||+.|||||..+ ..|....||||||+.|+||.|+..||..-.+. +
T Consensus 186 KIGDLGLAtl~r~s~----------aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~-A--- 250 (632)
T KOG0584|consen 186 KIGDLGLATLLRKSH----------AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP-A--- 250 (632)
T ss_pred eecchhHHHHhhccc----------cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH-H---
Confidence 999999999876543 24589999999999998 78999999999999999999999999732221 1
Q ss_pred HHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 582 YASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 582 ~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+...++..+. ..+.+..+- ..+++++|.+|+.. ..+|||+.|++..
T Consensus 251 -QIYKKV~SGi-KP~sl~kV~------------dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 251 -QIYKKVTSGI-KPAALSKVK------------DPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred -HHHHHHHcCC-CHHHhhccC------------CHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 1111121111 011122221 23689999999999 9999999999864
No 267
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.4e-33 Score=300.21 Aligned_cols=240 Identities=23% Similarity=0.339 Sum_probs=186.5
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.+|.|+| |.||++... ++.+|+|+++. .+.+|+.++..++|+||+++++++.+++..++||
T Consensus 8 ~lG~G~~-------g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 8 VIGRGAF-------GEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred EEEecCC-------eEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 3899999 999999974 77899999853 2567899999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++.+. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 81 DYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred ecCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 999999999999753 245899999999999999999999999 9999999999999999999999999997654
Q ss_pred CCccccCCcccceeeeccccccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-----GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
.... .......||..|+|||++.. ..++.++|||||||++|||++|+.||.+....+. ....
T Consensus 154 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~------~~~i 220 (331)
T cd05597 154 ADGT-------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKI 220 (331)
T ss_pred CCCC-------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH------HHHH
Confidence 3221 11122468999999999863 4578899999999999999999999976442111 1111
Q ss_pred HhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhccc--CCCCCCCHHHHHHH
Q 005923 589 LEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAH--DLNARPSISEVFVT 642 (669)
Q Consensus 589 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~--dP~~RPt~~evl~~ 642 (669)
.... ... .+ .......+..+.+++++|+.. ++..||++.+++.+
T Consensus 221 ~~~~-------~~~--~~-~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 221 MNHK-------EHF--QF-PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HcCC-------Ccc--cC-CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 1100 000 00 011112455678888887754 33448899999877
No 268
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.8e-33 Score=288.85 Aligned_cols=233 Identities=23% Similarity=0.418 Sum_probs=191.7
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
++|.|.| |.||+|.. ++..+|+|.... ++.+|++++++++||||+++++++..+...++||||
T Consensus 11 ~ig~G~~-------~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 11 KIGKGSF-------GEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred eEeecCC-------eEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 3899999 99999987 467899998752 466899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+++++|.+++... .+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 84 ~~~~~l~~~i~~~------~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06641 84 LGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 154 (277)
T ss_pred CCCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccc
Confidence 9999999998643 4899999999999999999999998 999999999999999999999999998765432
Q ss_pred ccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (669)
.. ......++..|+|||.+.+..++.++|+||||+++|||++|..|+....... ....
T Consensus 155 ~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---~~~~----------- 212 (277)
T cd06641 155 QI--------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK---VLFL----------- 212 (277)
T ss_pred hh--------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH---HHHH-----------
Confidence 11 1122457889999999999899999999999999999999999987533211 0000
Q ss_pred hhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 596 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+.. ......+...+..+.+++.+||+.+|.+||++.+++.+
T Consensus 213 --~~~----~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 213 --IPK----NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred --Hhc----CCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000 00112233445678999999999999999999999985
No 269
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4.3e-33 Score=285.69 Aligned_cols=244 Identities=27% Similarity=0.388 Sum_probs=196.2
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|.| |.||++..+ +..+++|.+.. .+.+|+.++++++||||+++++++.++...++|||
T Consensus 1 lg~g~~-------~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 73 (262)
T cd05572 1 LGVGGF-------GRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLME 73 (262)
T ss_pred CCCCCc-------eEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEe
Confidence 467888 999999996 78999998752 36679999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++++|.+++.+. ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||+++....
T Consensus 74 ~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~ 145 (262)
T cd05572 74 YCLGGELWTILRDR-----GLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS 145 (262)
T ss_pred cCCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence 99999999999764 34899999999999999999999998 99999999999999999999999999987654
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. ......++..|++||.+.+..++.++|+||||+++|||++|..|+..........
T Consensus 146 ~~---------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------------- 202 (262)
T cd05572 146 GQ---------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEI-------------- 202 (262)
T ss_pred cc---------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHH--------------
Confidence 32 1123467889999999998889999999999999999999999998654211110
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHhhcCCCCCC
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS-----ISEVFVTLSKIWSSSSDWD 654 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~~L~~i~~~~~~~~ 654 (669)
...+.+......+|...+..+.+++.+||+.||.+||+ +.|+++. -+-...+|+
T Consensus 203 ---~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~---~~~~~~~~~ 261 (262)
T cd05572 203 ---YNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH---KWFNGFDWE 261 (262)
T ss_pred ---HHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC---hhhhCCCCC
Confidence 11111111123344445678999999999999999999 5665542 222345665
No 270
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.2e-33 Score=292.74 Aligned_cols=236 Identities=25% Similarity=0.407 Sum_probs=192.3
Q ss_pred HHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 365 LKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 365 l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
.++|.|+| |.||++.. .+..+|+|.++. .+.+|+.+++.++||||+++++++..++..++||||
T Consensus 27 ~~ig~g~~-------g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 27 IKIGEGST-------GIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred hhcCCCCc-------eeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence 36899999 99999987 478899999742 366899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+++++|.+++.. ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~ 170 (297)
T cd06659 100 LQGGALTDIVSQ------TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD 170 (297)
T ss_pred CCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhcccc
Confidence 999999998854 24899999999999999999999999 999999999999999999999999998765432
Q ss_pred ccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (669)
.. ......++..|+|||.+.+..++.++||||||+++|||++|+.||......+.. . .+.
T Consensus 171 ~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~------~-~~~----- 230 (297)
T cd06659 171 VP--------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM------K-RLR----- 230 (297)
T ss_pred cc--------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------H-HHh-----
Confidence 21 122356889999999999989999999999999999999999999854432110 0 000
Q ss_pred hhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 596 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
....+.. .........+.+++.+||+.+|.+||++.|+++.
T Consensus 231 ----~~~~~~~--~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 231 ----DSPPPKL--KNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ----ccCCCCc--cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000111 1112234568899999999999999999999984
No 271
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.2e-33 Score=287.26 Aligned_cols=251 Identities=26% Similarity=0.410 Sum_probs=197.0
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
++.|+| |.||++... |+.+++|.++. .+.+|++++++++|+||+++++.+..+...++|||
T Consensus 1 lg~g~~-------~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 73 (265)
T cd05579 1 ISKGAY-------GRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVME 73 (265)
T ss_pred CCCCCc-------eEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEe
Confidence 367888 999999985 88999998853 35678999999999999999999998999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++++|.+++++. ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++.....
T Consensus 74 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~ 145 (265)
T cd05579 74 YLPGGDLASLLENV-----GSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLV 145 (265)
T ss_pred cCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhccc
Confidence 99999999999764 25899999999999999999999999 99999999999999999999999999886543
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.................++..|++||.+.....+.++||||||+++|||++|+.||......+. ... .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~---~~~---~------ 213 (265)
T cd05579 146 RRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI---FQN---I------ 213 (265)
T ss_pred CcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHH---H------
Confidence 2110000001122335678899999999988899999999999999999999999975442210 000 0
Q ss_pred HhhhhcccCCccCCCCcHH--HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCCCC
Q 005923 595 REKLRGFIDPSLRNEYPLD--LAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSSDW 653 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~--~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 653 (669)
..... ..+.. .+..+.+++.+||+.+|.+|||+.++.+.|+.-+-...+|
T Consensus 214 -------~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 214 -------LNGKI--EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred -------hcCCc--CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCCC
Confidence 00000 11222 2567899999999999999999977777776554445555
No 272
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.7e-33 Score=289.20 Aligned_cols=250 Identities=26% Similarity=0.435 Sum_probs=191.4
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
+|+|.| |.||+|..+ ++.|++|.++. .+.+|++++++++|+||+++++++..++..++||||
T Consensus 9 i~~g~~-------~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 9 VGEGAY-------GVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ecccCC-------eeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 799999 999999884 67899998752 467899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
++++.|..+.... ..+++.++..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 82 VERTLLELLEASP-----GGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred CCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 9987776655432 35899999999999999999999998 999999999999999999999999999876543
Q ss_pred ccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. .......++..|+|||++.+. .++.++||||||+++|||++|+.||.+....+.... +...+.....
T Consensus 154 ~~-------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~---~~~~~~~~~~ 223 (288)
T cd07833 154 PA-------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYL---IQKCLGPLPP 223 (288)
T ss_pred cc-------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHhCCCCH
Confidence 21 012234678889999999888 889999999999999999999999876543221111 1111110000
Q ss_pred H-hh-------hh--cccCC----ccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 595 R-EK-------LR--GFIDP----SLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 595 ~-~~-------l~--~~~d~----~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
. .. .. .+.+. .+...++..++.++.+++++||..+|.+||+++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 224 SHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0 00 00 00000 0001123334678999999999999999999999875
No 273
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.7e-33 Score=284.05 Aligned_cols=232 Identities=28% Similarity=0.432 Sum_probs=190.6
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc------------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG------------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~------------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
+|.|+| |.||+|.. +++.+++|.+.. .+.+|++++++++|+||+++++++..+...++|
T Consensus 8 ig~g~~-------~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 8 LGSGSF-------GSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred eeecCC-------ceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 899999 99999998 478899998642 256799999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++++|.+++.+. ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.+||+|||++...
T Consensus 81 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~ 152 (258)
T cd06632 81 LELVPGGSLAKLLKKY-----GSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQV 152 (258)
T ss_pred EEecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceec
Confidence 9999999999999754 35889999999999999999999999 999999999999999999999999998875
Q ss_pred CCCccccCCcccceeeecccccccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
.... ......++..|++||.+.... ++.++|+||||+++|||++|+.||....... ... ..
T Consensus 153 ~~~~---------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~--~~~----~~--- 214 (258)
T cd06632 153 VEFS---------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA--AVF----KI--- 214 (258)
T ss_pred cccc---------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH--HHH----HH---
Confidence 4322 123346788999999998776 8999999999999999999999987543211 100 00
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
... ......+......+.+++.+||+.+|.+||++.+++.
T Consensus 215 -------~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 215 -------GRS---KELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -------Hhc---ccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 000 0011223345567899999999999999999999985
No 274
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.3e-33 Score=292.81 Aligned_cols=244 Identities=24% Similarity=0.314 Sum_probs=192.6
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.+|.|+| |.||++... ++.+|+|.+.. .+..|++++++++|+||+++++.+..+...++||
T Consensus 8 ~ig~g~~-------g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 8 LLGKGDV-------GRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred eecCCcc-------EEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 3899999 999999984 68899998853 2567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+.+++|.+++... ....+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++....
T Consensus 81 e~~~~~~L~~~~~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 81 DYCPGGELFRLLQRQ---PGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSD 154 (316)
T ss_pred EecCCCCHHHHHHhC---CCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence 999999999999754 2356899999999999999999999998 9999999999999999999999999987653
Q ss_pred CCccccC---------------------CcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 005923 514 SDEHEQG---------------------GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572 (669)
Q Consensus 514 ~~~~~~~---------------------~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~ 572 (669)
....... ...........|+..|+|||.+.+..++.++||||||+++|||++|+.||.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 234 (316)
T cd05574 155 VEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKG 234 (316)
T ss_pred ccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCC
Confidence 3211000 0000112235788999999999999999999999999999999999999976
Q ss_pred CchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC----HHHHHH
Q 005923 573 DQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS----ISEVFV 641 (669)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt----~~evl~ 641 (669)
...... .. .+.+...........+..+.+++.+||+.||.+||+ +.|++.
T Consensus 235 ~~~~~~------~~-------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 235 SNRDET------FS-------------NILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CchHHH------HH-------------HHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 543211 00 011111111111125667999999999999999999 666665
No 275
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4e-33 Score=291.60 Aligned_cols=251 Identities=25% Similarity=0.312 Sum_probs=191.2
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc------------HHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD------------VSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~------------~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
.+|.|.| |.||+|.. +|+.+++|.++.. +..|++++++++|+||+++++++.+++..++
T Consensus 7 ~lg~g~~-------~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 7 KLGEGTY-------AVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred eeeeccc-------cEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEE
Confidence 3899999 99999997 4789999998532 3469999999999999999999999889999
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
||||+ +|+|.+++.... ..+++..++.++.||++||.|||+++ ++|+||+|+|||++.++.+||+|||+++.
T Consensus 80 v~e~~-~~~L~~~i~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~ 151 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKS----IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARS 151 (298)
T ss_pred EEccc-CCCHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeee
Confidence 99999 899999997542 36999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
...... ......++..|+|||.+.+ ..++.++||||||+++|||++|..+|.+..+.+ . ...+...+.
T Consensus 152 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~--~-~~~~~~~~~ 220 (298)
T cd07841 152 FGSPNR--------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID--Q-LGKIFEALG 220 (298)
T ss_pred ccCCCc--------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH--H-HHHHHHHcC
Confidence 654321 1122345778999999865 467899999999999999999977776544321 1 111111111
Q ss_pred hhhH-----HhhhhcccCCccCCCC-----cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 591 ESNV-----REKLRGFIDPSLRNEY-----PLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 591 ~~~~-----~~~l~~~~d~~l~~~~-----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.... ...+............ .......+.+++.+||+.||.+|||+.|++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 221 TPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred CCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 1000 0011111111111111 12335678999999999999999999999974
No 276
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=9.3e-33 Score=290.49 Aligned_cols=236 Identities=28% Similarity=0.424 Sum_probs=189.8
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
|...+ .++.|.| |.||+|.. +++.||+|.+.. ++.+|++++++++||||+++.++|..++
T Consensus 17 y~~~~-~lg~g~~-------g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~ 88 (307)
T cd06607 17 FTDLR-EIGHGSF-------GAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH 88 (307)
T ss_pred hhhhe-eecCCCC-------eEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC
Confidence 44444 4899999 99999987 478899998742 3668999999999999999999999999
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
..++||||+. |+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||
T Consensus 89 ~~~lv~e~~~-g~l~~~~~~~~----~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 89 TAWLVMEYCL-GSASDILEVHK----KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred eEEEEHHhhC-CCHHHHHHHcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecC
Confidence 9999999997 58888876432 35899999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE---NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 584 (669)
++...... ....++..|+|||.+. .+.++.++||||||+++|||++|+.|+.+...... ..
T Consensus 161 ~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~--~~-- 224 (307)
T cd06607 161 SASLVSPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LY-- 224 (307)
T ss_pred cceecCCC------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH--HH--
Confidence 98765322 1235678899999884 46688999999999999999999999876443211 00
Q ss_pred HHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
... ....+. ..+...+..+.+++.+||+.||.+||++.+|+..
T Consensus 225 --~~~----------~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 225 --HIA----------QNDSPT---LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred --HHh----------cCCCCC---CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 000011 1122355678999999999999999999999875
No 277
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=5.8e-33 Score=284.86 Aligned_cols=243 Identities=24% Similarity=0.439 Sum_probs=194.8
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
|++.+ .+|.|.| |.||++..+ ++.+++|.+.. ++.+|++++++++||||+++++++..++..
T Consensus 3 ~~~~~-~ig~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 74 (265)
T cd06605 3 LEYLG-ELGAGNS-------GVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDI 74 (265)
T ss_pred chHHH-HhcCCCC-------eEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEE
Confidence 34444 4899999 999999985 78899998753 366799999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~-~~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
++++||+++++|.+++...+ ..+++..+.+++.|++.||+|||+ .+ ++|+||+|+||++++++.+||+|||.
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~ 147 (265)
T cd06605 75 SICMEYMDGGSLDKILKEVQ----GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGV 147 (265)
T ss_pred EEEEEecCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999997642 468999999999999999999999 88 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
+....... .....++..|+|||.+.+..++.++||||||+++|||++|+.|+....... ......+...
T Consensus 148 ~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~ 216 (265)
T cd06605 148 SGQLVNSL----------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYI 216 (265)
T ss_pred chhhHHHH----------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHH
Confidence 87653321 111567889999999999999999999999999999999999997542110 0111111111
Q ss_pred HhhhhHHhhhhcccCCccCCCCcHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 589 LEESNVREKLRGFIDPSLRNEYPLD-LAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 589 ~~~~~~~~~l~~~~d~~l~~~~~~~-~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+... ....+.. ....+.+++.+||..||.+|||+.|++..
T Consensus 217 -------------~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 217 -------------VNEP-PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred -------------hcCC-CCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 1110 1111222 55678999999999999999999999854
No 278
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1e-32 Score=294.19 Aligned_cols=242 Identities=29% Similarity=0.462 Sum_probs=203.9
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcC-CCCceeEeeEEE
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKIN-HSNIIRLSGFCV 424 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~-H~niv~l~g~~~ 424 (669)
..|++.+ ++|.|.| |.||+++.+ |+.+|+|.++. ++.+|+.+|+++. |||||.+.++++
T Consensus 35 ~~Y~l~~-~lG~G~F-------g~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e 106 (382)
T KOG0032|consen 35 EKYELGR-ELGRGQF-------GVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFE 106 (382)
T ss_pred ccEEehh-hhCCCCc-------eEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 3466665 5999999 999999883 88999999842 4678999999998 999999999999
Q ss_pred ecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC----Cc
Q 005923 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN----LR 500 (669)
Q Consensus 425 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~----~~ 500 (669)
.....++|||++.||.|.+.+... .+++.....++.|++.+++|||+.+ ++||||||+|+|+... +.
T Consensus 107 ~~~~~~lvmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 107 DPDSVYLVMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred cCCeEEEEEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCc
Confidence 999999999999999999999754 2999999999999999999999999 9999999999999543 57
Q ss_pred EEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHH
Q 005923 501 AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580 (669)
Q Consensus 501 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~ 580 (669)
+|++|||++...... ......+||+.|+|||++....|+...||||+||++|.|++|..||.+....+...
T Consensus 178 ik~~DFGla~~~~~~---------~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~ 248 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKPG---------ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL 248 (382)
T ss_pred EEEeeCCCceEccCC---------ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH
Confidence 999999999987652 23556899999999999999999999999999999999999999999876432211
Q ss_pred HHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 581 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+... +..+..+.-.+....+.++++.|+..||..|+|+.+++++
T Consensus 249 ------~i~~~-----------~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 249 ------AILRG-----------DFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ------HHHcC-----------CCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11111 1122223334556778999999999999999999999985
No 279
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=290.09 Aligned_cols=239 Identities=24% Similarity=0.444 Sum_probs=205.2
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEE--ECCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGS--FKGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~--~~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
..|.+++ .+|.|-| ..|-.++ +.|+.||||++.. .+.+|++.|+.++|||||+|+.+....
T Consensus 18 GLYDLek-TlG~GHF-------AVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ 89 (864)
T KOG4717|consen 18 GLYDLEK-TLGRGHF-------AVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ 89 (864)
T ss_pred eeehhhh-hhcCCce-------ehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc
Confidence 4677766 4999999 6666664 5899999999853 467899999999999999999999888
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeec-CCCcEEEcc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLD-TNLRAKITN 505 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~-~~~~~kl~D 505 (669)
..+|||+|.-++|+|.||+.++. ..|.+....+++.||..|+.|+|+.+ +|||||||+||.+- +-|-+|+.|
T Consensus 90 TKlyLiLELGD~GDl~DyImKHe----~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTD 162 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKHE----EGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTD 162 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhhh----ccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeee
Confidence 89999999999999999998763 45999999999999999999999999 99999999999875 458899999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT-PKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s-~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 584 (669)
||++-.+..+. .....+|...|-|||.+.+..|. ++.||||+||+||-|++|+.||...++.
T Consensus 163 FGFSNkf~PG~---------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS-------- 225 (864)
T KOG4717|consen 163 FGFSNKFQPGK---------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS-------- 225 (864)
T ss_pred ccccccCCCcc---------hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch--------
Confidence 99998876543 23457899999999999998885 6799999999999999999999865543
Q ss_pred HHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
+.+..++|..+ ..|..+..+..+||..||..||.+|-+.+||+.
T Consensus 226 -----------ETLTmImDCKY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 226 -----------ETLTMIMDCKY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred -----------hhhhhhhcccc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 33555666654 467778888999999999999999999999874
No 280
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=8e-33 Score=287.14 Aligned_cols=250 Identities=24% Similarity=0.401 Sum_probs=189.3
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
++.|.| |.||+|.. +|..++||.++. .+.+|++++++++||||+++++++.+++..++||||
T Consensus 8 l~~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 8 IGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred ecCCCc-------eEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 788999 99999987 478899998752 367899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+. ++|.+++... ....+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||+++.....
T Consensus 81 ~~-~~l~~~~~~~---~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~ 153 (284)
T cd07860 81 LH-QDLKKFMDAS---PLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 153 (284)
T ss_pred cc-cCHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 96 6899998754 2356899999999999999999999998 999999999999999999999999998865432
Q ss_pred ccccCCcccceeeecccccccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh-
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN- 593 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 593 (669)
.. ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||.+....+ ...... ..+....
T Consensus 154 ~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~-~~~~~~~~ 222 (284)
T cd07860 154 VR--------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIF-RTLGTPDE 222 (284)
T ss_pred cc--------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHH-HHhCCCCh
Confidence 11 112235678899999887644 5889999999999999999999998654321 111111 1110000
Q ss_pred -----------HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 594 -----------VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 594 -----------~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
............+. .........+.+++.+||+.||.+|||++|++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 223 VVWPGVTSLPDYKPSFPKWARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred hhhhhhhHHHHHHhhcccccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00000000000000 0011234567899999999999999999999853
No 281
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.8e-33 Score=292.37 Aligned_cols=257 Identities=24% Similarity=0.319 Sum_probs=198.3
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.++.|.| |.||++... ++.|++|.++. .+.+|+++++.++||||+++++.+..++..++||
T Consensus 8 ~l~~g~~-------~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 8 LISNGAY-------GAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred EeecCCC-------eeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 3789999 999999884 67899998753 2457999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.+++... +.+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++...
T Consensus 81 e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~ 152 (305)
T cd05609 81 EYVEGGDCATLLKNI-----GALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGL 152 (305)
T ss_pred ecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccC
Confidence 999999999999754 35899999999999999999999998 9999999999999999999999999987422
Q ss_pred CCcccc-------CCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 514 SDEHEQ-------GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 514 ~~~~~~-------~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
...... ............++..|+|||.+.+..++.++|+||||+++|||++|+.||.+....+ .. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~--~~----~ 226 (305)
T cd05609 153 MSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE--LF----G 226 (305)
T ss_pred cCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HH----H
Confidence 111000 0000011122457889999999999999999999999999999999999998654321 10 0
Q ss_pred HHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCCCCCC
Q 005923 587 RVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSSDWDP 655 (669)
Q Consensus 587 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~ 655 (669)
.... .....+.. +...+..+.+++.+||+.||.+||++.++.+.|+.-+-...+|..
T Consensus 227 ~~~~--------~~~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~ 283 (305)
T cd05609 227 QVIS--------DDIEWPEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNG 283 (305)
T ss_pred HHHh--------cccCCCCc----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHHH
Confidence 0000 00111111 113445689999999999999999988888877776555566654
No 282
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-34 Score=305.04 Aligned_cols=238 Identities=26% Similarity=0.411 Sum_probs=200.5
Q ss_pred HHHHhCCCCcccceeeEEEEEEECCC--eeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 365 LKIATGSFSEENRIQGSVYRGSFKGD--DAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 365 l~~~~g~f~~~~~~~G~Vy~g~~~g~--~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
+.+|.|.| |+||.|+.... .+|||-+.. -+..|+.+-++++|.|||+++|.|-+++..-+.||-
T Consensus 581 vVLGKGTY-------G~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEq 653 (1226)
T KOG4279|consen 581 VVLGKGTY-------GTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQ 653 (1226)
T ss_pred EEeecCce-------eEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeec
Confidence 45899999 99999998544 568998743 266899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC-CCcEEEcccCCcccc
Q 005923 436 ADNGALSDWLHSNRYQTSDNL--TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT-NLRAKITNFGLARSA 512 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l--~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~-~~~~kl~DfGla~~~ 512 (669)
++||||.+.|+.. .++| .+..+-.+..||++||.|||++. |||||||-.|||++. .|.+||+|||-++.+
T Consensus 654 VPGGSLSsLLrsk----WGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRL 726 (1226)
T KOG4279|consen 654 VPGGSLSSLLRSK----WGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRL 726 (1226)
T ss_pred CCCCcHHHHHHhc----cCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhh
Confidence 9999999999753 5667 78888899999999999999999 999999999999965 789999999999877
Q ss_pred CCCccccCCcccceeeecccccccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG--VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
..- ...+....||.-|||||++..+ .|..++|||||||++.||.||+.||.......+.+ .++
T Consensus 727 Agi--------nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM-----FkV-- 791 (1226)
T KOG4279|consen 727 AGI--------NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM-----FKV-- 791 (1226)
T ss_pred ccC--------CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh-----hhh--
Confidence 542 2456778999999999999874 58899999999999999999999998543322111 000
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
++ -..+.+.|+++..+...++.+|+..||.+||++.++++-
T Consensus 792 ---------Gm--yKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 792 ---------GM--YKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred ---------cc--eecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 01 133578899999999999999999999999999999863
No 283
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.9e-33 Score=290.61 Aligned_cols=251 Identities=26% Similarity=0.413 Sum_probs=190.9
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
++|.|.| |.||++..+ ++.+|+|.+.. .+.+|++++++++||||+++++++..++..++|||
T Consensus 8 ~lg~g~~-------~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 8 LVGEGSY-------GMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred eeccCCC-------eEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 4899999 999999984 78899998642 35689999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++++|.++.... ..++|.+++.++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 81 FVDHTVLDDLEKYP-----NGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred cCCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 99999998877543 34899999999999999999999998 99999999999999999999999999987543
Q ss_pred CccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... ......++..|+|||++.+ ..++.++||||||+++|||++|+.+|......+ ....+........
T Consensus 153 ~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~ 221 (286)
T cd07846 153 PGE--------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID---QLYHIIKCLGNLI 221 (286)
T ss_pred Ccc--------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH---HHHHHHHHhCCCc
Confidence 321 1223457889999999875 457889999999999999999998887544321 1111111111100
Q ss_pred HH--h------hhhcccCCccCCC-----CcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 594 VR--E------KLRGFIDPSLRNE-----YPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 594 ~~--~------~l~~~~d~~l~~~-----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.. + .......+..... .....+..+.+++.+||+.||.+||++.|+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 222 PRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00 0 0000001111000 012345678999999999999999999998863
No 284
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.3e-32 Score=284.49 Aligned_cols=239 Identities=24% Similarity=0.451 Sum_probs=191.5
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcC---CCCceeEeeEEEec
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKIN---HSNIIRLSGFCVHE 426 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~---H~niv~l~g~~~~~ 426 (669)
|+..+ .++.|.| |.||+|.. .+..+++|.++. ++.+|+.++++++ |||++++++++..+
T Consensus 3 y~~~~-~l~~g~~-------g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~ 74 (277)
T cd06917 3 YQRLE-LIGRGAY-------GAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG 74 (277)
T ss_pred hhhhh-heeccCC-------ceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC
Confidence 44444 4899999 99999997 478899998742 3667999999997 99999999999999
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
...++||||+++++|.++++.. .+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.++|+||
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~------~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~df 145 (277)
T cd06917 75 PRLWIIMEYAEGGSVRTLMKAG------PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDF 145 (277)
T ss_pred CEEEEEEecCCCCcHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccC
Confidence 9999999999999999998643 5899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 585 (669)
|++........ ......|+..|+|||.+.++ .++.++||||||+++|||++|+.||.+...... .
T Consensus 146 g~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~------~ 211 (277)
T cd06917 146 GVAALLNQNSS--------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA------M 211 (277)
T ss_pred CceeecCCCcc--------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh------h
Confidence 99987654321 11234688899999998754 468999999999999999999999975432110 0
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
..+.....+.+.. ...+.++.+++.+||+.||.+||++.|++..
T Consensus 212 ----------~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 212 ----------MLIPKSKPPRLED---NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred ----------hccccCCCCCCCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 0010111111111 1144578999999999999999999999863
No 285
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=6.7e-33 Score=287.52 Aligned_cols=243 Identities=24% Similarity=0.452 Sum_probs=190.1
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc------cHHHHHHHHHhc-CCCCceeEeeEEEe---
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG------DVSSEINILKKI-NHSNIIRLSGFCVH--- 425 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~------~~~~E~~~l~~l-~H~niv~l~g~~~~--- 425 (669)
..|++.+ .+|+|.| |.||+|.. .++.+|+|.+.. ++..|+.+++++ +|+||+++++++..
T Consensus 16 ~~~~~~~-~lg~g~~-------~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 87 (282)
T cd06636 16 GIFELVE-VVGNGTY-------GQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSP 87 (282)
T ss_pred hhhhhhe-eeccCCC-------eEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccc
Confidence 3555555 4899999 99999998 467899998742 456788999998 79999999999863
Q ss_pred ---cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEE
Q 005923 426 ---EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAK 502 (669)
Q Consensus 426 ---~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~k 502 (669)
....+++|||+++|+|.+++...+ ...+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++
T Consensus 88 ~~~~~~~~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 88 PGHDDQLWLVMEFCGAGSVTDLVKNTK---GNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred cCCCCEEEEEEEeCCCCcHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEE
Confidence 356799999999999999997643 345889999999999999999999999 99999999999999999999
Q ss_pred EcccCCccccCCCccccCCcccceeeecccccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhH
Q 005923 503 ITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE-----NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577 (669)
Q Consensus 503 l~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~ 577 (669)
|+|||+++....... ......|+..|+|||.+. ...++.++||||||+++|||++|+.||.......
T Consensus 162 l~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~ 233 (282)
T cd06636 162 LVDFGVSAQLDRTVG--------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR 233 (282)
T ss_pred EeeCcchhhhhcccc--------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh
Confidence 999999886532211 112346888999999986 3567889999999999999999999997543211
Q ss_pred HHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 578 AELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.. .. +.....+.. .....+..+.+++.+||+.||.+||++.|+++
T Consensus 234 ~~------~~----------~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 234 AL------FL----------IPRNPPPKL---KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hh------hh----------HhhCCCCCC---cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00 00 000011111 11234567899999999999999999999975
No 286
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.1e-32 Score=292.77 Aligned_cols=267 Identities=18% Similarity=0.303 Sum_probs=193.7
Q ss_pred HHHhC--CCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEE
Q 005923 366 KIATG--SFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 366 ~~~~g--~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 432 (669)
++|.| +| |+||++.. .|+.||+|.++. .+.+|+.+++.++||||++++++|..++..++|
T Consensus 5 ~ig~g~~~~-------~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v 77 (328)
T cd08226 5 EIGRGFCNL-------TSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVI 77 (328)
T ss_pred HhCCcccCc-------eeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEE
Confidence 46666 77 89999987 589999999752 256788999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+.+|+|.+++.+.. ...+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.+|++||+.+...
T Consensus 78 ~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 78 SPFMAYGSANSLLKTYF---PEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSL 151 (328)
T ss_pred EecccCCCHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence 99999999999997642 235899999999999999999999998 999999999999999999999999866543
Q ss_pred CCCccccCCcccceeeecccccccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH--
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG--VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV-- 588 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-- 588 (669)
........ ..........++..|+|||++.+. .++.++||||||+++|||++|+.||......... ...+...
T Consensus 152 ~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~--~~~~~~~~~ 228 (328)
T cd08226 152 VRNGQKAK-VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQML--LQKLKGPPY 228 (328)
T ss_pred hccCcccc-ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHH--HHHhcCCCC
Confidence 22111000 000011112356679999999763 4789999999999999999999999754322111 0000000
Q ss_pred --------------Hhhh--hH-----Hhh-----hhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 589 --------------LEES--NV-----REK-----LRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 589 --------------~~~~--~~-----~~~-----l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.... .. ... .....+..++...+..+...+.+|+++||+.||.+|||++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 229 SPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred CCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0000 00 000 001111222333345567789999999999999999999999754
Q ss_pred --HHHhhc
Q 005923 643 --LSKIWS 648 (669)
Q Consensus 643 --L~~i~~ 648 (669)
+..+..
T Consensus 309 ~~~~~~~~ 316 (328)
T cd08226 309 AFFKQVKE 316 (328)
T ss_pred HHHHHHHH
Confidence 455544
No 287
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.2e-32 Score=282.60 Aligned_cols=244 Identities=24% Similarity=0.392 Sum_probs=194.8
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
+|+|+| |.||+|.. ++..+++|++.. ++.+|+++++.++|+|++++++.+..++..++|||++
T Consensus 9 lg~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 9 IGVGAT-------AVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred ecCCCC-------eEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 899999 99999987 567899998752 3678999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
++++|.++++... ....+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 82 SGGSLLDIMKSSY--PRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred CCCcHHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 9999999997642 2246899999999999999999999999 9999999999999999999999999998765432
Q ss_pred cccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHH
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (669)
... ........|+..|+|||.+... .++.++|+||||+++|||++|+.||....... ........
T Consensus 157 ~~~----~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~~~~~~~~---- 222 (267)
T cd06610 157 DRT----RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK------VLMLTLQN---- 222 (267)
T ss_pred ccc----ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh------hHHHHhcC----
Confidence 210 0122334688899999999877 78999999999999999999999997543211 01111110
Q ss_pred hhhhcccCCccCCCC-cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 596 EKLRGFIDPSLRNEY-PLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 596 ~~l~~~~d~~l~~~~-~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
..+.+.... ....+..+.+++.+||+.||.+||++.|+++.
T Consensus 223 ------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 223 ------DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred ------CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111111111 12445678999999999999999999999863
No 288
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.5e-33 Score=298.52 Aligned_cols=257 Identities=24% Similarity=0.383 Sum_probs=189.9
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
..|...+ .+|.|+| |.||++.. .+..||||.++. .+.+|++++++++||||+++++++...
T Consensus 15 ~~y~~~~-~lg~G~~-------g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 86 (343)
T cd07878 15 ERYQNLT-PVGSGAY-------GSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPA 86 (343)
T ss_pred hhhhhhe-ecccCCC-------eEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccc
Confidence 3455544 4899999 99999987 467899999853 245799999999999999999987543
Q ss_pred ------CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCc
Q 005923 427 ------GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLR 500 (669)
Q Consensus 427 ------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~ 500 (669)
...++++|++ +++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.
T Consensus 87 ~~~~~~~~~~~~~~~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~ 156 (343)
T cd07878 87 TSIENFNEVYLVTNLM-GADLNNIVKC------QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCE 156 (343)
T ss_pred ccccccCcEEEEeecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCC
Confidence 3468999988 6799988854 24899999999999999999999999 999999999999999999
Q ss_pred EEEcccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHH
Q 005923 501 AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579 (669)
Q Consensus 501 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~ 579 (669)
+||+|||+++...... ....||..|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.
T Consensus 157 ~kl~Dfg~~~~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~- 224 (343)
T cd07878 157 LRILDFGLARQADDEM-----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ- 224 (343)
T ss_pred EEEcCCccceecCCCc-----------CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH-
Confidence 9999999998654321 22468899999999877 5689999999999999999999999976443211
Q ss_pred HHHHHHHHHHhhhhH-------HhhhhcccCC--ccCC----CCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HH
Q 005923 580 LLYASISRVLEESNV-------REKLRGFIDP--SLRN----EYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT--LS 644 (669)
Q Consensus 580 ~~~~~~~~~~~~~~~-------~~~l~~~~d~--~l~~----~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~ 644 (669)
...+......... .+..+.++.. .... .........+.+|+.+||+.||.+|||+.|++.+ +.
T Consensus 225 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~ 302 (343)
T cd07878 225 --LKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFS 302 (343)
T ss_pred --HHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchh
Confidence 1111111110000 0000000000 0000 0001123457899999999999999999999965 44
Q ss_pred Hh
Q 005923 645 KI 646 (669)
Q Consensus 645 ~i 646 (669)
+.
T Consensus 303 ~~ 304 (343)
T cd07878 303 QY 304 (343)
T ss_pred cc
Confidence 43
No 289
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.5e-32 Score=286.74 Aligned_cols=257 Identities=26% Similarity=0.378 Sum_probs=193.9
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
..|++.+ .+|.|.| |.||+|..+ +..+++|.++. .+.+|++++++++||||+++++++..+
T Consensus 5 ~~y~~~~-~lg~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 76 (293)
T cd07843 5 DEYEKLN-RIEEGTY-------GVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS 76 (293)
T ss_pred hhhhhhh-hhcCCCC-------eEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec
Confidence 3455544 4899999 999999985 67899998852 245799999999999999999999877
Q ss_pred --CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc
Q 005923 427 --GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504 (669)
Q Consensus 427 --~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 504 (669)
+..++||||++ ++|.+++.... ..+++..++.++.|++.||+|||+.+ ++|+||||+|||+++++.+||+
T Consensus 77 ~~~~~~lv~e~~~-~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~ 148 (293)
T cd07843 77 NLDKIYMVMEYVE-HDLKSLMETMK----QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKIC 148 (293)
T ss_pred CCCcEEEEehhcC-cCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEe
Confidence 78999999997 49999987642 35899999999999999999999999 9999999999999999999999
Q ss_pred ccCCccccCCCccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
|||+++....... ......++..|+|||.+.+. .++.++|+||||+++|||++|+.||......+. ..
T Consensus 149 d~g~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~---~~ 217 (293)
T cd07843 149 DFGLAREYGSPLK--------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ---LN 217 (293)
T ss_pred ecCceeeccCCcc--------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH---HH
Confidence 9999987654321 11223567889999998764 468999999999999999999999986543211 11
Q ss_pred HHHHHHhhhhH--H-----------hhhhcccCCccCCCCcHH-HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 584 SISRVLEESNV--R-----------EKLRGFIDPSLRNEYPLD-LAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 584 ~~~~~~~~~~~--~-----------~~l~~~~d~~l~~~~~~~-~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.+...+..... . ..........+...++.. ....+.+++.+||+.||++|||+.|++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 218 KIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 11111110000 0 000000111112222222 4567889999999999999999999985
No 290
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=8.9e-33 Score=287.98 Aligned_cols=257 Identities=25% Similarity=0.387 Sum_probs=190.0
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCc
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGN 428 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 428 (669)
.|.+.+ .+|.|.| |.||+|.. +++.+|+|.++. .+.+|++++++++|+||+++++++..++.
T Consensus 6 ~y~~~~-~lg~g~~-------~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 77 (291)
T cd07844 6 TYKKLD-KLGEGSY-------ATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKT 77 (291)
T ss_pred ceeEEE-EEeecCC-------eEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCe
Confidence 344444 3899999 99999987 478899998853 24679999999999999999999999999
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
.++||||+.+ +|.+++.+.. ..+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+
T Consensus 78 ~~lv~e~~~~-~L~~~~~~~~----~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~ 149 (291)
T cd07844 78 LTLVFEYLDT-DLKQYMDDCG----GGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGL 149 (291)
T ss_pred EEEEEecCCC-CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECcccc
Confidence 9999999985 9999987542 36899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
++....... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+....... ...+..
T Consensus 150 ~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~--~~~~~~ 219 (291)
T cd07844 150 ARAKSVPSK--------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQ--LHKIFR 219 (291)
T ss_pred ccccCCCCc--------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHH--HHHHHH
Confidence 876432211 1112346788999999875 55899999999999999999999999754421111 111111
Q ss_pred HHhhhhHHh-----hhhcccC--------CccCCCC-cHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 588 VLEESNVRE-----KLRGFID--------PSLRNEY-PLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 588 ~~~~~~~~~-----~l~~~~d--------~~l~~~~-~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.+....... ....... ..+.... .......+.+++.+||+.||.+|||+.|++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 220 VLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 111100000 0000000 0000000 0111256789999999999999999999875
No 291
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.6e-33 Score=321.27 Aligned_cols=245 Identities=27% Similarity=0.414 Sum_probs=189.4
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec-
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE- 426 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~- 426 (669)
.|.+.+ ++|.|.| |.||++... +..+|+|.++. .+..|+.+|++++|||||+++++|...
T Consensus 14 ~YeIl~-kLG~GgF-------GtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 14 EYEVIK-KIGNGRF-------GEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA 85 (1021)
T ss_pred CEEEEE-EEecCCC-------eEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence 455555 3899999 999999984 66789998752 366899999999999999999988654
Q ss_pred -CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC----CCeEeeCCCCCCeeecCC---
Q 005923 427 -GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN----PPYVHKNLKTSNILLDTN--- 498 (669)
Q Consensus 427 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~----~~ivHrDik~~NILl~~~--- 498 (669)
...||||||+++|+|.++|.... .....+++..++.|+.||+.||.|||+.+. .+||||||||+||||+.+
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~-~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCY-KMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 46899999999999999997532 223469999999999999999999998542 349999999999999642
Q ss_pred --------------CcEEEcccCCccccCCCccccCCcccceeeeccccccccccccccc--CCCCchhhHHHHHHHHHH
Q 005923 499 --------------LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN--GVITPKLDVFAFGVVVLE 562 (669)
Q Consensus 499 --------------~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~s~~sDV~S~Gvvl~e 562 (669)
..+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||+|||
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYE 235 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIES---------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYE 235 (1021)
T ss_pred cccccccccccCCCCceEEccCCccccccccc---------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHH
Confidence 358999999998664321 1233578999999999864 458999999999999999
Q ss_pred HHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 563 LLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 563 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
|++|+.||........ . + .. +... +.+. ....+..+.+||..||+.+|.+||++.|++.
T Consensus 236 LLTGk~PF~~~~~~~q--l---i-~~---------lk~~--p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 236 LCSGKTPFHKANNFSQ--L---I-SE---------LKRG--PDLP---IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHCCCCCCcCCcHHH--H---H-HH---------HhcC--CCCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 9999999975443211 0 0 00 1000 0110 0123456899999999999999999999984
No 292
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1e-32 Score=286.39 Aligned_cols=252 Identities=27% Similarity=0.372 Sum_probs=192.4
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
.+|.|.| |.||+|.. +|+.+++|+++. ++.+|+.++++++|+||+++++++..+...++|||
T Consensus 7 ~l~~g~~-------~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 7 RIGEGAH-------GIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred ecccCCC-------cEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 3899999 99999997 478899999852 36689999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+ +++|.+++.... ..+++.+++.++.||+.||+|||+.+ ++|+||||+||++++++.++|+|||++.....
T Consensus 80 ~~-~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 80 YM-PSDLSEVLRDEE----RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSE 151 (286)
T ss_pred cc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccC
Confidence 99 999999997542 56999999999999999999999999 99999999999999999999999999987654
Q ss_pred CccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .......++..|+|||.+.+. .++.++||||+|++++||++|..+|.+..+.+. ...+...+....
T Consensus 152 ~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~ 221 (286)
T cd07832 152 EEP-------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ---LAIVFRTLGTPN 221 (286)
T ss_pred CCC-------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH---HHHHHHHcCCCC
Confidence 321 112335688899999998654 468999999999999999999877765443211 111111111100
Q ss_pred H--Hhhhh------cccCCccC----CCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 594 V--REKLR------GFIDPSLR----NEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 594 ~--~~~l~------~~~d~~l~----~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. ...+. ....+... .....+....+.+++.+||+.||.+||++++++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 222 EETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 00000 00000000 00111334778999999999999999999999864
No 293
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.3e-32 Score=288.88 Aligned_cols=237 Identities=27% Similarity=0.424 Sum_probs=190.3
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.++.|+| |.||++.. ++..+|+|.+.. ++.+|++++++++|+|++++++++.++...++||
T Consensus 32 ~lg~G~~-------~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 32 EIGHGSF-------GAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred eeccCCC-------eEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 4899999 99999987 477899998752 3667999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+. |+|.+++... ...++|.++..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||++....
T Consensus 105 e~~~-g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (317)
T cd06635 105 EYCL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIAS 176 (317)
T ss_pred eCCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccC
Confidence 9997 5888888653 245899999999999999999999999 9999999999999999999999999987543
Q ss_pred CCccccCCcccceeeecccccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIE---NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
.. ....++..|+|||.+. .+.++.++||||||+++|||++|+.||........ ... ...
T Consensus 177 ~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~----~~~ 238 (317)
T cd06635 177 PA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYH----IAQ 238 (317)
T ss_pred Cc------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH--HHH----HHh
Confidence 22 1235788899999974 46789999999999999999999999876432111 000 000
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhc
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWS 648 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 648 (669)
.......+......+.+++.+||+.+|.+||++.+++..+-.+..
T Consensus 239 -------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 239 -------------NESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred -------------ccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 000011122344568999999999999999999999987654443
No 294
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-34 Score=298.51 Aligned_cols=234 Identities=29% Similarity=0.458 Sum_probs=195.4
Q ss_pred hhHH-HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEec----------ccHHHHHHHHHhcCCCCceeEeeEEEecCc
Q 005923 362 FQDL-KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMK----------GDVSSEINILKKINHSNIIRLSGFCVHEGN 428 (669)
Q Consensus 362 ~~~l-~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~----------~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 428 (669)
|.++ +||.|+| |.||.+.. +.+.||||+|. .|+.+|+..|.+++|||.+.+-|+|..+..
T Consensus 28 f~dLrEIGHGSF-------GAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~T 100 (948)
T KOG0577|consen 28 FSDLREIGHGSF-------GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHT 100 (948)
T ss_pred HHHHHHhcCCcc-------ceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccch
Confidence 3344 5999999 99999987 57789999994 368899999999999999999999999999
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
.|||||||- ||-.|.|.-++ ++|.+..+..|+.+.+.||+|||+++ .||||||+.|||+.+.|.+|++|||.
T Consensus 101 aWLVMEYCl-GSAsDlleVhk----KplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGS 172 (948)
T KOG0577|consen 101 AWLVMEYCL-GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGS 172 (948)
T ss_pred HHHHHHHHh-ccHHHHHHHHh----ccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccc
Confidence 999999996 58888886543 56999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeecccccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE---NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 585 (669)
|...... +.++||+.|||||++. .+.|+-++||||+|++..||.-.+.|++..+... .++..
T Consensus 173 Asi~~PA------------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS--ALYHI- 237 (948)
T KOG0577|consen 173 ASIMAPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYHI- 237 (948)
T ss_pred hhhcCch------------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH--HHHHH-
Confidence 9876543 3478999999999985 5889999999999999999999999998765421 11111
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
...-.|.+. ..+-...++.++..||++-|.+|||.++++.
T Consensus 238 -------------AQNesPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 238 -------------AQNESPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred -------------HhcCCCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 111122222 2244567899999999999999999998765
No 295
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=9.8e-33 Score=284.23 Aligned_cols=245 Identities=26% Similarity=0.486 Sum_probs=191.5
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc------cHHHHHHHHHhc-CCCCceeEeeEEEecC--
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG------DVSSEINILKKI-NHSNIIRLSGFCVHEG-- 427 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~------~~~~E~~~l~~l-~H~niv~l~g~~~~~~-- 427 (669)
.|++.+ .++.|.| |.||+|..+ ++.+++|.++. ++.+|+.+++++ +|+||+++++++....
T Consensus 7 ~y~~~~-~l~~g~~-------~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 7 IFELVE-VIGEGTY-------GKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP 78 (275)
T ss_pred heehee-eecCCCC-------eEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence 355544 3899999 999999984 67899998753 477899999999 7999999999997654
Q ss_pred ----ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEE
Q 005923 428 ----NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKI 503 (669)
Q Consensus 428 ----~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl 503 (669)
..++||||+++++|.+++...+ .....+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l 154 (275)
T cd06608 79 GNDDQLWLVMELCGGGSVTDLVKGLR-KKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKL 154 (275)
T ss_pred CcceEEEEEEEcCCCCcHHHHHHHHh-hcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEE
Confidence 4799999999999999987532 12356899999999999999999999999 999999999999999999999
Q ss_pred cccCCccccCCCccccCCcccceeeeccccccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHH
Q 005923 504 TNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-----GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA 578 (669)
Q Consensus 504 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~ 578 (669)
+|||++........ ......++..|+|||.+.. ..++.++||||||++++||++|+.||.......
T Consensus 155 ~d~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~- 225 (275)
T cd06608 155 VDFGVSAQLDSTLG--------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR- 225 (275)
T ss_pred CCCccceecccchh--------hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-
Confidence 99999976543221 1123467889999998853 346789999999999999999999997533211
Q ss_pred HHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.. ... ... ..+. ...+......+.+++.+||..||.+|||+.|+++
T Consensus 226 -~~----~~~---------~~~-~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 226 -AL----FKI---------PRN-PPPT--LKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred -HH----HHh---------hcc-CCCC--CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 10 000 000 0011 1222335567899999999999999999999986
No 296
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.3e-32 Score=281.97 Aligned_cols=240 Identities=28% Similarity=0.483 Sum_probs=191.1
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
.+++|.| |.||+|.. ++..+++|.++. .+.+|++++++++|+||+++++++...+..++|+|
T Consensus 7 ~lg~G~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 7 KIGGGTF-------GKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred EeecCCC-------cEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 3899999 99999987 477899999753 35679999999999999999999998999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~ 151 (264)
T cd06626 80 YCSGGTLEELLEHG-----RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKN 151 (264)
T ss_pred cCCCCcHHHHHhhc-----CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCC
Confidence 99999999999754 34889999999999999999999999 99999999999999999999999999987654
Q ss_pred CccccCCcccceeeecccccccccccccccCC---CCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV---ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
...... .......++..|+|||.+.+.. ++.++||||||+++|||++|+.||....... ..... .
T Consensus 152 ~~~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-~~~~~----~--- 219 (264)
T cd06626 152 NTTTMG----EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIMFH----V--- 219 (264)
T ss_pred CCCccc----ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-HHHHH----H---
Confidence 332110 1122346788999999998766 8999999999999999999999997543211 11000 0
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.....+.+ +........+.+++.+||+.||.+||++.|++.
T Consensus 220 -------~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 220 -------GAGHKPPI--PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -------hcCCCCCC--CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00001111 111123567889999999999999999999874
No 297
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.4e-32 Score=285.11 Aligned_cols=233 Identities=23% Similarity=0.333 Sum_probs=183.6
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc----------HHHHHHHHHh---cCCCCceeEeeEEEecCceeE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD----------VSSEINILKK---INHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~----------~~~E~~~l~~---l~H~niv~l~g~~~~~~~~~l 431 (669)
+|.|+| |.||++.. ++..+|+|.++.. +..|..+++. .+|+|++.+++++..++..++
T Consensus 2 lg~G~~-------g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l 74 (279)
T cd05633 2 IGRGGF-------GEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCF 74 (279)
T ss_pred cccCCC-------eEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEE
Confidence 688999 99999987 4788999987531 2234333333 479999999999998899999
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
||||+++|+|.+++..+ +.+++..+..++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++.
T Consensus 75 v~e~~~~~~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 75 ILDLMNGGDLHYHLSQH-----GVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 99999999999999754 35999999999999999999999999 99999999999999999999999999875
Q ss_pred cCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
..... .....|+..|+|||.+.+ ..++.++||||||++++||++|..||........... ...
T Consensus 147 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~----~~~-- 210 (279)
T cd05633 147 FSKKK----------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DRM-- 210 (279)
T ss_pred ccccC----------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHH----HHH--
Confidence 53221 122468999999999864 5689999999999999999999999975432111110 000
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVT 642 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 642 (669)
.. ......+...+.++.+++.+||+.||.+|| ++.|++++
T Consensus 211 --------~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 211 --------TL----TVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred --------hh----cCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 00 111223444566789999999999999999 59988875
No 298
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.3e-32 Score=285.31 Aligned_cols=250 Identities=26% Similarity=0.410 Sum_probs=190.1
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
+|.|.+ |.||+|.. +|..+++|+++. .+.+|++++++++|+|++++++++.+++..+++|||
T Consensus 7 l~~g~~-------~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 7 IGEGTY-------GVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred ecCCCC-------eEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 788999 99999987 588999998752 366899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
++ ++|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||+|+||++++++.++|+|||+++.....
T Consensus 80 ~~-~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~ 152 (283)
T cd07835 80 LD-LDLKKYMDSSP---LTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVP 152 (283)
T ss_pred cC-cCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCC
Confidence 95 69999997642 246899999999999999999999998 999999999999999999999999999765332
Q ss_pred ccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhh--
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEES-- 592 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 592 (669)
.. ...+..++..|+|||++.+. .++.++||||||+++|||++|+.||.+...... ... +.......
T Consensus 153 ~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~-~~~~~~~~~~ 221 (283)
T cd07835 153 VR--------TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ--LFR-IFRTLGTPDE 221 (283)
T ss_pred cc--------ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHH-HHHHhCCCCh
Confidence 11 11223567899999988764 578999999999999999999999986543221 111 11110000
Q ss_pred ----------hHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 593 ----------NVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 593 ----------~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.............. ..........+.+++.+||+.||.+|||++|+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 222 DVWPGVTSLPDYKPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred HHhhhhhhchhhhhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000111110111 11122334578899999999999999999999853
No 299
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.3e-32 Score=287.59 Aligned_cols=241 Identities=24% Similarity=0.416 Sum_probs=194.7
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCce
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 429 (669)
.|++.+ .+|.|.| |.||++.. +++.+++|.+.. .+.+|+.++++++||||+++++++..++..
T Consensus 20 ~~~~~~-~lg~g~~-------g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~ 91 (293)
T cd06647 20 KYTRFE-KIGQGAS-------GTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDEL 91 (293)
T ss_pred hceeee-EecCCCC-------eEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcE
Confidence 344443 3899999 99999986 577899998753 356799999999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++|+||+++++|.+++.+. .+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||++
T Consensus 92 ~lv~e~~~~~~L~~~~~~~------~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~ 162 (293)
T cd06647 92 WVVMEYLAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC 162 (293)
T ss_pred EEEEecCCCCcHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcce
Confidence 9999999999999999753 4789999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 589 (669)
........ ......++..|+|||.+.+..++.++||||||+++||+++|+.||......+... .
T Consensus 163 ~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~------~-- 226 (293)
T cd06647 163 AQITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------L-- 226 (293)
T ss_pred eccccccc--------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee------e--
Confidence 76543221 1123467889999999999899999999999999999999999997543211000 0
Q ss_pred hhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 590 EESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 590 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+ ...+......+......+.+++.+||+.+|.+||++++++.+
T Consensus 227 --------~--~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 227 --------I--ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred --------h--hcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000111111233445678999999999999999999999976
No 300
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1e-32 Score=287.75 Aligned_cols=235 Identities=29% Similarity=0.457 Sum_probs=192.8
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
|.+.+ .++.|+| |.||++.. .++.+|+|.++. .+.+|++++++++||||+++++++.+++
T Consensus 3 y~~~~-~ig~g~~-------~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 74 (290)
T cd05580 3 FEFIK-TLGTGSF-------GRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS 74 (290)
T ss_pred eEEEE-EeecCCC-------eEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC
Confidence 33433 3899999 99999998 478899998853 2567999999999999999999999999
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||+|+|||+++++.+||+|||
T Consensus 75 ~~~~v~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 75 NLYLVMEYVPGGELFSHLRKS-----GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred eEEEEEecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCC
Confidence 999999999999999999754 46899999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
+++..... .....++..|+|||.+.+...+.++||||||+++|||++|+.||....... ....
T Consensus 147 ~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~--- 209 (290)
T cd05580 147 FAKRVKGR-----------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ---IYEK--- 209 (290)
T ss_pred CccccCCC-----------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH---HHHH---
Confidence 99876432 123467889999999998889999999999999999999999997544211 0000
Q ss_pred HHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005923 588 VLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVT 642 (669)
Q Consensus 588 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 642 (669)
. ... ....+......+.+++.+||..||.+|+ +++|++..
T Consensus 210 ~-------------~~~--~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 210 I-------------LEG--KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred H-------------hcC--CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 0 000 1123334456789999999999999999 77777643
No 301
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=9e-33 Score=291.15 Aligned_cols=260 Identities=24% Similarity=0.356 Sum_probs=190.8
Q ss_pred HHhCCCCcccceeeEEEEEEE----CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEec--Ccee
Q 005923 367 IATGSFSEENRIQGSVYRGSF----KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHE--GNTY 430 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~----~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 430 (669)
+|.|.| |.||+|.. .+..+|+|.++. .+.+|+.++++++||||+++++++... +..+
T Consensus 8 ig~g~~-------g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 8 IGRGTY-------GRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred eccCCc-------EEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 889999 99999998 457899999865 356799999999999999999999987 7899
Q ss_pred EEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC----CCcEEEccc
Q 005923 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT----NLRAKITNF 506 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~----~~~~kl~Df 506 (669)
+||||+++ +|.+++..........+++..++.++.|++.||+|||+.+ ++||||||+|||++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 7888876543333347899999999999999999999999 999999999999999 999999999
Q ss_pred CCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhH------HH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE------AE 579 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~------~~ 579 (669)
|+++........ ........++..|+|||.+.+ ..++.++||||||++++||++|+.||.+..... ..
T Consensus 157 g~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 231 (316)
T cd07842 157 GLARLFNAPLKP-----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQR 231 (316)
T ss_pred ccccccCCCccc-----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHH
Confidence 999876433210 111223467889999998876 457999999999999999999999997543321 00
Q ss_pred HHHHHHHHHHhhhhHH--h------hhhcccCCccCCCCc---------H--HHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005923 580 LLYASISRVLEESNVR--E------KLRGFIDPSLRNEYP---------L--DLAFSMAQLAKNCTAHDLNARPSISEVF 640 (669)
Q Consensus 580 ~~~~~~~~~~~~~~~~--~------~l~~~~d~~l~~~~~---------~--~~~~~l~~li~~Cl~~dP~~RPt~~evl 640 (669)
.....+...+...... . ......+......++ . .....+.+++.+||+.||.+|||+.|++
T Consensus 232 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil 311 (316)
T cd07842 232 DQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEAL 311 (316)
T ss_pred HHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 0111111111100000 0 000000000001111 1 2345688999999999999999999998
Q ss_pred HH
Q 005923 641 VT 642 (669)
Q Consensus 641 ~~ 642 (669)
.+
T Consensus 312 ~~ 313 (316)
T cd07842 312 EH 313 (316)
T ss_pred cC
Confidence 53
No 302
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.6e-32 Score=281.02 Aligned_cols=244 Identities=25% Similarity=0.352 Sum_probs=191.8
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc----------HHHHHHHH-HhcCCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD----------VSSEINIL-KKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~----------~~~E~~~l-~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
++.|.| |.||+|.. .|+.+|+|.++.. +..|..++ ...+|+|++++++++..++..++|+
T Consensus 4 l~~g~~-------~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 76 (260)
T cd05611 4 ISKGAF-------GSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVM 76 (260)
T ss_pred CCcCCC-------eeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEE
Confidence 788999 99999988 4789999998531 22343333 3458999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++++|.++++.. ..+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||+++...
T Consensus 77 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 148 (260)
T cd05611 77 EYLNGGDCASLIKTL-----GGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGL 148 (260)
T ss_pred eccCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceecc
Confidence 999999999999754 35899999999999999999999998 9999999999999999999999999987643
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
.. ....++..|+|||.+.+..++.++||||||+++|||++|..||........ ... ...
T Consensus 149 ~~------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~---~~~--- 207 (260)
T cd05611 149 EN------------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV---FDN---ILS--- 207 (260)
T ss_pred cc------------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH---HHH---HHh---
Confidence 21 123577889999999988899999999999999999999999976543211 100 000
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCCCCC
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSSDWD 654 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~ 654 (669)
.. . .........++..+.+++.+||+.||.+||++.++.+.|+.-+-...+||
T Consensus 208 --~~----~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 208 --RR----I--NWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINWD 260 (260)
T ss_pred --cc----c--CCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCCC
Confidence 00 0 01111222345678999999999999999988777766665555666665
No 303
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=6.9e-33 Score=282.80 Aligned_cols=235 Identities=24% Similarity=0.428 Sum_probs=190.4
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
++.|+| |.||+|..+ |..+|+|.+.. .+.+|++++++++|+||+++++.+..++..++|+||
T Consensus 8 l~~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 8 IGEGSF-------GKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred ecCCCc-------ceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 788999 999999984 67899998742 356899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC-cEEEcccCCccccCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL-RAKITNFGLARSAES 514 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~-~~kl~DfGla~~~~~ 514 (669)
+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++ .+||+|||.+.....
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 81 CDGGDLMKRINRQR---GVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred CCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 99999999997542 235899999999999999999999999 99999999999998885 569999999987643
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. .......|+..|+|||.+.+..++.++|+||||+++|||++|+.|+......+ .+...
T Consensus 155 ~~--------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~------ 214 (257)
T cd08225 155 SM--------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ------LVLKI------ 214 (257)
T ss_pred Cc--------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH------HHHHH------
Confidence 22 11223468889999999998899999999999999999999999987543211 11111
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
...... ..+...+..+.+++.+||+.+|.+|||+.|++..
T Consensus 215 ---~~~~~~-----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 215 ---CQGYFA-----PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ---hcccCC-----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 111111 1112334568999999999999999999999864
No 304
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.9e-32 Score=283.43 Aligned_cols=243 Identities=28% Similarity=0.466 Sum_probs=196.7
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc------cHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG------DVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
.|+... .+++|.| |.||+|..+ +..+++|+++. .+.+|++++++++|+|++++++++..++..+
T Consensus 20 ~~~~~~-~l~~g~~-------~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 20 LYKNLE-KIGEGAS-------GEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELW 91 (286)
T ss_pred cchHhH-hccCCCC-------eEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEE
Confidence 355554 4899999 999999985 78899999863 4678999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcc
Q 005923 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR 510 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~ 510 (669)
+|+||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~ 164 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNF----VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAA 164 (286)
T ss_pred EEEeccCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhh
Confidence 9999999999999998652 36999999999999999999999998 9999999999999999999999999987
Q ss_pred ccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
....... ......++..|++||.+.+..++.++||||||+++|||++|+.|+.......... ....
T Consensus 165 ~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~------~~~~ 230 (286)
T cd06614 165 QLTKEKS--------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALF------LITT 230 (286)
T ss_pred hhccchh--------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHHh
Confidence 6543221 1122457789999999999899999999999999999999999987544321100 0000
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
... + ....+..++..+.+++.+||+.+|.+||++.++++.
T Consensus 231 ---------~~~-~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 231 ---------KGI-P--PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred ---------cCC-C--CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 000 0 011122245678999999999999999999999863
No 305
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.2e-32 Score=285.09 Aligned_cols=257 Identities=24% Similarity=0.347 Sum_probs=189.6
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCc
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGN 428 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 428 (669)
.|.+.+ ++|.|.| |.||+|.. ++..+++|.++. .+.+|++++++++|+||+++.+++..++.
T Consensus 6 ~y~~~~-~ig~g~~-------~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 77 (291)
T cd07870 6 SYLNLE-KLGEGSY-------ATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKET 77 (291)
T ss_pred eeEEEE-EEEecCC-------EEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCe
Confidence 344444 3899999 99999987 478999998853 35689999999999999999999998889
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
.++||||+. ++|.+++... ...+.+.++..++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||+
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~ 149 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQH----PGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGL 149 (291)
T ss_pred EEEEEeccc-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEecccc
Confidence 999999996 6888887643 235788999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
++....... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||.+..+.. +.+ ..+..
T Consensus 150 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~-~~~-~~~~~ 219 (291)
T cd07870 150 ARAKSIPSQ--------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF-EQL-EKIWT 219 (291)
T ss_pred ccccCCCCC--------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH-HHH-HHHHH
Confidence 986533211 11223568899999998764 57899999999999999999999997544321 111 11111
Q ss_pred HHhhhh--H---HhhhhcccCCccCCCCc---------HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 588 VLEESN--V---REKLRGFIDPSLRNEYP---------LDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 588 ~~~~~~--~---~~~l~~~~d~~l~~~~~---------~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.+.... . ...+............+ ......+.+++.+|++.||.+|||+.|++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 220 VLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred HcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 110000 0 00000000000000000 012356789999999999999999999875
No 306
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.5e-32 Score=286.76 Aligned_cols=253 Identities=25% Similarity=0.358 Sum_probs=188.1
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcC-CCCceeEeeEEEecCc-----e
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKIN-HSNIIRLSGFCVHEGN-----T 429 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~-H~niv~l~g~~~~~~~-----~ 429 (669)
+|.|.| |.||+|.. +++.||+|..+. .+.+|+.++++++ |+||+++++++...+. .
T Consensus 9 lg~g~~-------g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 9 IGEGTY-------GKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred ecccCC-------eEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 899999 99999998 478899998752 3567999999995 6999999999987665 7
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC-CCcEEEcccCC
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT-NLRAKITNFGL 508 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~-~~~~kl~DfGl 508 (669)
++||||+++ +|.+++..........+++..++.++.||+.||.|||+.+ ++||||+|+||+++. ++.+||+|||+
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeeccc
Confidence 999999985 8999987653222456899999999999999999999998 999999999999998 89999999999
Q ss_pred ccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
++....... ......++..|+|||.+.+ ..++.++||||||+++|||++|..||.+....+. .. .+..
T Consensus 158 ~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~--~~-~~~~ 226 (295)
T cd07837 158 GRAFSIPVK--------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ--LL-HIFK 226 (295)
T ss_pred ceecCCCcc--------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH--HH-HHHH
Confidence 986533211 1122356788999998865 4579999999999999999999999986543221 11 1111
Q ss_pred HHhhhhHH-----hhhhcccC-CccCC----CCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 588 VLEESNVR-----EKLRGFID-PSLRN----EYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 588 ~~~~~~~~-----~~l~~~~d-~~l~~----~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.+...... ..+..... +.... ........++.+++.+||+.||.+||+++|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 227 LLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 11100000 00000000 00000 001134567899999999999999999999985
No 307
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=6.7e-34 Score=279.00 Aligned_cols=272 Identities=25% Similarity=0.356 Sum_probs=201.7
Q ss_pred cccccccchhHHHHHhCCCCcccceeeEEEEEEEC------CCeeEEEEeccc---------HHHHHHHHHhcCCCCcee
Q 005923 354 VESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFK------GDDAAVKVMKGD---------VSSEINILKKINHSNIIR 418 (669)
Q Consensus 354 ~~~~~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~------g~~vavK~~~~~---------~~~E~~~l~~l~H~niv~ 418 (669)
++.+..|+.-. ++|.|.| |.||+++-. ...+|+|.++.+ ..+|+.+++.++||||+.
T Consensus 20 ve~l~~ye~ig-~Ig~GTY-------G~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~ 91 (438)
T KOG0666|consen 20 VEDLFEYEGIG-KIGRGTY-------GKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVIS 91 (438)
T ss_pred HHHHHHhhccc-eeccccc-------ceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchh
Confidence 44444443322 3899999 999999652 236899998754 568999999999999999
Q ss_pred EeeEEEe-cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC
Q 005923 419 LSGFCVH-EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497 (669)
Q Consensus 419 l~g~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~ 497 (669)
|..++.. +...+|++||+++ +|...++.++....+.++...+..|++||++|+.|||++- |+||||||.|||+..
T Consensus 92 Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmg 167 (438)
T KOG0666|consen 92 LVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMG 167 (438)
T ss_pred HHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEec
Confidence 9999987 7789999999998 9999998887666678999999999999999999999998 999999999999987
Q ss_pred C----CcEEEcccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 005923 498 N----LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTG 572 (669)
Q Consensus 498 ~----~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~ 572 (669)
+ |++||+|||++|.+...-.. ......++-|.+|+|||.+.+ ..||++.|||+.||++.||++-+..|.+
T Consensus 168 dgperG~VKIaDlGlaR~~~~plkp-----l~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 168 DGPERGRVKIADLGLARLFNNPLKP-----LASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred cCCccCeeEeecccHHHHhhccccc-----cccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 7 99999999999987654321 112344678999999999988 5699999999999999999999888876
Q ss_pred CchhH------HHHHHHHHHHHHhhhhHH--hhhhcccCC---------ccCCCCc--------HHHHHHHHHHHHHhcc
Q 005923 573 DQNCE------AELLYASISRVLEESNVR--EKLRGFIDP---------SLRNEYP--------LDLAFSMAQLAKNCTA 627 (669)
Q Consensus 573 ~~~~~------~~~~~~~~~~~~~~~~~~--~~l~~~~d~---------~l~~~~~--------~~~~~~l~~li~~Cl~ 627 (669)
....- .......+..++..+... ..++.+-+- ....... ..-....++|+.++|.
T Consensus 243 ~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~ 322 (438)
T KOG0666|consen 243 REEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLT 322 (438)
T ss_pred hhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhc
Confidence 43210 011223333333322211 111111110 0000000 0001226799999999
Q ss_pred cCCCCCCCHHHHHHH
Q 005923 628 HDLNARPSISEVFVT 642 (669)
Q Consensus 628 ~dP~~RPt~~evl~~ 642 (669)
.||.+|.|+++.++.
T Consensus 323 yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 323 YDPIKRITAEQALEH 337 (438)
T ss_pred cCchhhccHHHHhcc
Confidence 999999999998865
No 308
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.8e-32 Score=283.77 Aligned_cols=234 Identities=25% Similarity=0.432 Sum_probs=191.0
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
.+|.|.| |.||++.. .+..+++|.++. .+.+|+.++++++|+||+++++++...+..++|+||+
T Consensus 26 ~lg~g~~-------g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 26 KIGEGST-------GIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred EeccCCC-------eEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence 4899999 99999986 467899998742 3567999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
++++|.+++... .+++..+..++.|++.||+|||+.+ ++||||+|+||+++.++.++|+|||++.......
T Consensus 99 ~~~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 99 EGGALTDIVTHT------RMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred CCCCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 999999999752 4899999999999999999999999 9999999999999999999999999987654322
Q ss_pred cccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHh
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVRE 596 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (669)
. ......|+..|+|||.+.+..++.++||||||+++|||++|+.||......+. ...
T Consensus 170 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~------~~~--------- 226 (285)
T cd06648 170 P--------RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA------MKR--------- 226 (285)
T ss_pred c--------ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH------HHH---------
Confidence 1 11234678899999999988899999999999999999999999876442111 100
Q ss_pred hhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 597 KLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 597 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
+.....+.+. .+...+..+.+++.+||+.+|.+||++.|+++
T Consensus 227 -~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 227 -IRDNLPPKLK--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred -HHhcCCCCCc--ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 1111111111 11224467899999999999999999999986
No 309
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.8e-32 Score=285.16 Aligned_cols=242 Identities=24% Similarity=0.379 Sum_probs=187.2
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcC-CCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e 434 (669)
++|.|+| |.||++.. .+..+|+|.++. .+.+|+.++.++. |+||+++++++..++..+++||
T Consensus 11 ~lg~G~~-------g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 11 EIGRGAF-------GTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HhCCCCc-------eEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 4899999 99999998 478899998853 3567999999996 9999999999998889999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKY-TNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~-~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
|+.. +|.++...........+++..+.+++.|++.||+|||+. + ++||||||+||++++++.+||+|||+++...
T Consensus 84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 9864 665544221001235699999999999999999999974 7 9999999999999999999999999997654
Q ss_pred CCccccCCcccceeeecccccccccccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG---VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
.... .....|+..|+|||.+.+. .++.++||||||+++|||++|+.||..... ....+....
T Consensus 160 ~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~- 224 (288)
T cd06616 160 DSIA---------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-----VFDQLTQVV- 224 (288)
T ss_pred cCCc---------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-----HHHHHhhhc-
Confidence 3211 1223578899999999876 689999999999999999999999874321 001111110
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
....+.+....+...+.++.+|+.+||+.||.+|||++||+..
T Consensus 225 ---------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 225 ---------KGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred ---------CCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111222222233456679999999999999999999999875
No 310
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.5e-32 Score=282.42 Aligned_cols=245 Identities=23% Similarity=0.359 Sum_probs=190.2
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEec--CceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHE--GNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~ 433 (669)
++|.|.| |.||++.. .++.+|+|.+.. ++.+|++++++++||||++++++|... +..++||
T Consensus 8 ~lg~g~~-------~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 8 RLGEGAG-------GSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred EeccCCc-------eEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 3789999 99999998 467899998753 367899999999999999999998654 3689999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++++|.+++.... .....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++....
T Consensus 81 e~~~~~~L~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 81 EYCEGGSLDSIYKKVK-KRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EecCCCCHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 9999999999886532 23356899999999999999999999999 9999999999999999999999999987653
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .....++..|+|||.+.+..++.++||||||+++|||++|+.|+....... ....+......
T Consensus 157 ~~~----------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~---- 221 (287)
T cd06621 157 NSL----------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP-LGPIELLSYIV---- 221 (287)
T ss_pred ccc----------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC-CChHHHHHHHh----
Confidence 321 112356788999999999999999999999999999999999997542100 00001110000
Q ss_pred HHhhhhcccCCccCCCCc--HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 594 VREKLRGFIDPSLRNEYP--LDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~--~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
..-.+.+....+ ......+.+++.+||+.||.+|||+.|+++.
T Consensus 222 ------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 222 ------NMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred ------cCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 000011111111 2345678999999999999999999999973
No 311
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.7e-32 Score=282.04 Aligned_cols=250 Identities=22% Similarity=0.388 Sum_probs=190.0
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
+++.|.| |.||+|.. +|..+|+|.++. .+.+|++++++++|+||+++++++...+..++||||
T Consensus 7 ~l~~g~~-------~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 7 KLGEGTY-------ATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred eeccCCc-------eEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 4789999 99999998 478899998753 345799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+++ +|.+++.... ....+++.++..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||+++.....
T Consensus 80 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 80 MDK-DLKKYMDTHG--VRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIP 153 (284)
T ss_pred CCc-cHHHHHHhcC--CCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCC
Confidence 985 8999987542 2346899999999999999999999998 999999999999999999999999999865432
Q ss_pred ccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh-
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN- 593 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 593 (669)
.. ......++..|++||.+.+ ..++.++||||||+++|||++|+.||.+....+. ...+........
T Consensus 154 ~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~ 222 (284)
T cd07836 154 VN--------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ---LLKIFRIMGTPTE 222 (284)
T ss_pred cc--------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHHHhCCCCh
Confidence 11 1122456888999999866 4578999999999999999999999986543221 111111110000
Q ss_pred -HHhhhhcccCCccCCC-----------CcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 594 -VREKLRGFIDPSLRNE-----------YPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 594 -~~~~l~~~~d~~l~~~-----------~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
..+.+... +.+... .....+..+.+++.+||+.||.+||++.|+++
T Consensus 223 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 223 STWPGISQL--PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hhHHHHhcC--chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00111100 000011 11123456889999999999999999999985
No 312
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.9e-32 Score=284.05 Aligned_cols=238 Identities=22% Similarity=0.390 Sum_probs=184.2
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc--------HHHHHHH-HHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD--------VSSEINI-LKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~--------~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
.+|.|+| |.||++... |+.||+|.++.. +..|+.+ ++.++||||+++++++..++..++|||
T Consensus 8 ~ig~g~~-------g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 8 ELGRGAY-------GVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred EecccCC-------eEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 3899999 999999984 789999988642 3345554 556789999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKY-TNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~-~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
|++ |+|.+++.... .....+++..++.++.|++.||+|||++ + ++||||||+|||++.++.+||+|||+++...
T Consensus 81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 81 VMD-TSLDKFYKKVY-DKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhc-ccHHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 997 68998887542 2235699999999999999999999986 7 9999999999999999999999999998653
Q ss_pred CCccccCCcccceeeeccccccccccccccc----CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN----GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 589 (669)
... ......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||....... .......
T Consensus 156 ~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~ 221 (283)
T cd06617 156 DSV---------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF-----QQLKQVV 221 (283)
T ss_pred ccc---------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH-----HHHHHHH
Confidence 321 1122467889999999865 456889999999999999999999986422111 0011111
Q ss_pred hhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 590 EESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 590 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. ...+.+. ....+..+.+++.+||..+|.+||++.++++.
T Consensus 222 ~----------~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 222 E----------EPSPQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred h----------cCCCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0011110 11234578999999999999999999999873
No 313
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.1e-32 Score=286.86 Aligned_cols=250 Identities=24% Similarity=0.376 Sum_probs=200.7
Q ss_pred HHhCCCCcccceeeEEEEEEE-----CCCeeEEEEecc-----------cHHHHHHHHHhc-CCCCceeEeeEEEecCce
Q 005923 367 IATGSFSEENRIQGSVYRGSF-----KGDDAAVKVMKG-----------DVSSEINILKKI-NHSNIIRLSGFCVHEGNT 429 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~-----~g~~vavK~~~~-----------~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 429 (669)
+|.|+| |.||++.. +++.+|||.++. .+..|++++.++ +|+||+++++.+..+...
T Consensus 8 ig~G~~-------~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 8 LGTGAY-------GKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred eccCCC-------ceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 899999 99999875 356799998853 255799999999 599999999999988899
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++
T Consensus 81 ~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~ 152 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR-----EHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLS 152 (288)
T ss_pred EEEEecCCCCcHHHHHhhc-----CCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccc
Confidence 9999999999999999753 35899999999999999999999998 999999999999999999999999998
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV--ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
+....... .......|+..|+|||.+.+.. .+.++||||||+++|||++|..||....... .. ..+..
T Consensus 153 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~-~~~~~ 222 (288)
T cd05583 153 KEFLAEEE-------ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQ-SEISR 222 (288)
T ss_pred cccccccc-------cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hH-HHHHH
Confidence 87543321 1122346788999999987765 7889999999999999999999986432110 00 00000
Q ss_pred HHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCCCCCC
Q 005923 588 VLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSSDWDP 655 (669)
Q Consensus 588 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~ 655 (669)
. .... ....+..+...+.+++.+||+.||.+|||+.++.+.|...+-...+|+.
T Consensus 223 ~--------~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~~ 276 (288)
T cd05583 223 R--------ILKS------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDD 276 (288)
T ss_pred H--------HHcc------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHHH
Confidence 0 0000 1123334556789999999999999999999999999999888889975
No 314
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-32 Score=305.92 Aligned_cols=266 Identities=23% Similarity=0.382 Sum_probs=185.1
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEECC---CeeEE------------------EEec------ccHHHHHHHHHh
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFKG---DDAAV------------------KVMK------GDVSSEINILKK 410 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g---~~vav------------------K~~~------~~~~~E~~~l~~ 410 (669)
..|++.+ ++|.|+| |+||++..+. ...++ |.++ ..+.+|+++|++
T Consensus 148 ~~Y~ii~-~LG~G~f-------G~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~ 219 (501)
T PHA03210 148 AHFRVID-DLPAGAF-------GKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGR 219 (501)
T ss_pred hccEEEe-EecCCCC-------cceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHh
Confidence 3455555 4899999 9999987531 11111 1111 236789999999
Q ss_pred cCCCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCC
Q 005923 411 INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490 (669)
Q Consensus 411 l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~ 490 (669)
++|+||+++++++...+..++|+|++. ++|.+++..............++..|+.||+.||+|||+++ |+||||||
T Consensus 220 l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP 295 (501)
T PHA03210 220 LNHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKL 295 (501)
T ss_pred CCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCH
Confidence 999999999999999999999999995 58888876543222233456678899999999999999999 99999999
Q ss_pred CCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCC
Q 005923 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAV 570 (669)
Q Consensus 491 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~ 570 (669)
+|||++.++.+||+|||+++....... .......||..|+|||++.+..++.++|||||||++|||++|..++
T Consensus 296 ~NILl~~~~~vkL~DFGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 296 ENIFLNCDGKIVLGDFGTAMPFEKERE-------AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred HHEEECCCCCEEEEeCCCceecCcccc-------cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999987643321 1123357899999999999999999999999999999999988654
Q ss_pred CC-CchhHHHHHHHHHHHHH--hhh--hHHhhhhcccCCc-c---CCCCc-----HHHHHHHHHHHHHhcccCCCCCCCH
Q 005923 571 TG-DQNCEAELLYASISRVL--EES--NVREKLRGFIDPS-L---RNEYP-----LDLAFSMAQLAKNCTAHDLNARPSI 636 (669)
Q Consensus 571 ~~-~~~~~~~~~~~~~~~~~--~~~--~~~~~l~~~~d~~-l---~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPt~ 636 (669)
.+ ........+...+.... ... .....+..+++.. + ....+ ...+..+.+++.+||+.||.+|||+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa 448 (501)
T PHA03210 369 IGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGA 448 (501)
T ss_pred ccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCH
Confidence 42 22211122212111110 000 0000111111100 0 00000 1123456788999999999999999
Q ss_pred HHHHHH
Q 005923 637 SEVFVT 642 (669)
Q Consensus 637 ~evl~~ 642 (669)
.|++.+
T Consensus 449 ~elL~h 454 (501)
T PHA03210 449 AELLAL 454 (501)
T ss_pred HHHhhC
Confidence 999864
No 315
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.3e-32 Score=286.98 Aligned_cols=254 Identities=20% Similarity=0.314 Sum_probs=187.9
Q ss_pred eEEEEEEECCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCC
Q 005923 380 GSVYRGSFKGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRY 450 (669)
Q Consensus 380 G~Vy~g~~~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~ 450 (669)
+.||++..+++.+|||+++. .+.+|++++++++|+||+++++++..++..+++|||+++|+|.+++....
T Consensus 16 v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~- 94 (314)
T cd08216 16 VHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHF- 94 (314)
T ss_pred EEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhc-
Confidence 56677777899999999753 36689999999999999999999999999999999999999999998642
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeec
Q 005923 451 QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHV 530 (669)
Q Consensus 451 ~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~ 530 (669)
...+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.+........... .........
T Consensus 95 --~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~-~~~~~~~~~ 168 (314)
T cd08216 95 --PEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR-VVHDFPKSS 168 (314)
T ss_pred --ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeecccccccc-ccccccccc
Confidence 235889999999999999999999999 99999999999999999999999999876543221100 001122345
Q ss_pred cccccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH----hhhhH---Hhhhh--
Q 005923 531 VGTYGYMAPEYIEN--GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL----EESNV---REKLR-- 599 (669)
Q Consensus 531 ~gt~~y~aPE~l~~--~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~l~-- 599 (669)
.++..|+|||.+.. ..++.++|+||||+++|||++|+.||....... ...+...... ..... .....
T Consensus 169 ~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
T cd08216 169 VKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKSTYPLYEDSMSQS 246 (314)
T ss_pred cccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCchhhhcCCcCcc
Confidence 67788999999876 458899999999999999999999998543221 1111111000 00000 00000
Q ss_pred --cccCCc----cCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 600 --GFIDPS----LRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 600 --~~~d~~----l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
...++. ...........++.+++.+||+.||.+|||+++++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 011111 1112233445678999999999999999999999975
No 316
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.5e-32 Score=277.79 Aligned_cols=237 Identities=24% Similarity=0.400 Sum_probs=194.0
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
.++.|+| |.||++... ++.+++|.++. .+.+|+..+.+++|+|++++++++..++..++||||
T Consensus 8 ~i~~g~~-------~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 8 VLGQGSS-------GVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred eeeecCC-------eEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 3889999 999999984 78899998753 366899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~-~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
+++++|.+++... ..+++..++.++.|++.||+|||+ .+ ++||||+|+||+++.++.++|+|||++.....
T Consensus 81 ~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 81 MDGGSLADLLKKV-----GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred cCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 9999999999754 468999999999999999999999 88 99999999999999999999999999987654
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
... ......++..|+|||.+.+..++.++|+||||+++|||++|+.|+........... ..
T Consensus 153 ~~~--------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~---~~-------- 213 (264)
T cd06623 153 TLD--------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFEL---MQ-------- 213 (264)
T ss_pred CCC--------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHH---HH--------
Confidence 321 11234578899999999999999999999999999999999999975432110010 00
Q ss_pred HhhhhcccCCccCCCCcHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLD-LAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~-~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+..... ...+.. .+..+.+++.+||+.+|.+||++.|+++.
T Consensus 214 --~~~~~~~----~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 214 --AICDGPP----PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --HHhcCCC----CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0111111 112223 55678999999999999999999999875
No 317
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=7.4e-32 Score=279.29 Aligned_cols=249 Identities=27% Similarity=0.392 Sum_probs=187.3
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc--------HHHHHHHHHhcC-CCCceeEeeEEEec--CceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD--------VSSEINILKKIN-HSNIIRLSGFCVHE--GNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~--------~~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lV 432 (669)
++|.|.| |.||+|.. ++..+|+|.++.. ..+|+.++.++. |+|++++++++.++ +..++|
T Consensus 6 ~lg~g~~-------~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 6 KIGEGTF-------SEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred ecccccc-------ceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 3789999 99999987 4788999988642 236888899885 99999999999887 889999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||++ |+|.+++...+ ..++|..+..++.|++.||+|||+.+ ++||||+|+||++++ +.+||+|||+++..
T Consensus 79 ~e~~~-~~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~ 149 (282)
T cd07831 79 FELMD-MNLYELIKGRK----RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGI 149 (282)
T ss_pred EecCC-ccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEeccccccc
Confidence 99997 58988887542 46899999999999999999999999 999999999999999 99999999999876
Q ss_pred CCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... .....++..|+|||.+.. +.++.++|||||||++|||++|+.||.+.+..+. ...+......
T Consensus 150 ~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~---~~~~~~~~~~ 217 (282)
T cd07831 150 YSKPP---------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ---IAKIHDVLGT 217 (282)
T ss_pred ccCCC---------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH---HHHHHHHcCC
Confidence 43221 112357889999997654 5678999999999999999999999986543221 1122111111
Q ss_pred hhH--Hhhh-----hcccCCccCC----CCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 592 SNV--REKL-----RGFIDPSLRN----EYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 592 ~~~--~~~l-----~~~~d~~l~~----~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
... .... ..+..+.... ......+..+.+++.+||+.||.+||+++|+++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 218 PDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred CCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 000 0000 0000000000 0012346789999999999999999999999863
No 318
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.8e-32 Score=279.31 Aligned_cols=236 Identities=23% Similarity=0.346 Sum_probs=194.2
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+++.|.| |.||++.. +++.+++|.++. ++.+|++++++++|+||+++.+++..+...++|||
T Consensus 7 ~i~~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 7 KLGKGSY-------GSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred eecCCCc-------eeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 3788999 99999987 467899998753 35679999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++++|.+++.+.. .....+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+|++|||+++....
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 80 YAPFGDLSKAISKRK-KKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hcCCCCHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 999999999997632 22356899999999999999999999999 99999999999999999999999999987654
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. .....++..|++||.+.+..++.++|+||||+++|||++|+.||......+. ..
T Consensus 156 ~~----------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~---~~----------- 211 (256)
T cd08530 156 NM----------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL---RY----------- 211 (256)
T ss_pred CC----------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HH-----------
Confidence 31 1224578899999999999999999999999999999999999976542110 00
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.. ........+......+.+++.+||+.+|++||++.|+++.
T Consensus 212 --~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 212 --KV----QRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred --HH----hcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 0011122334556779999999999999999999999863
No 319
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=5.2e-32 Score=278.18 Aligned_cols=241 Identities=22% Similarity=0.327 Sum_probs=191.5
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc------------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG------------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~------------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
|.+.+ .++.|.| |.||+|.. ++..+++|.+.. .+.+|++++++++|+||+++++++.+
T Consensus 4 ~~~~~-~lg~g~~-------g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 75 (264)
T cd06653 4 WRLGK-LLGRGAF-------GEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRD 75 (264)
T ss_pred eeeee-eEccCCC-------eEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEc
Confidence 44444 3899999 99999987 478899998631 35679999999999999999999876
Q ss_pred c--CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEE
Q 005923 426 E--GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKI 503 (669)
Q Consensus 426 ~--~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl 503 (669)
. ...++|+||+++++|.+++... ..+++..+++++.|++.||.|||+.+ ++|+||||+||+++.++.++|
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l 147 (264)
T cd06653 76 PEEKKLSIFVEYMPGGSIKDQLKAY-----GALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKL 147 (264)
T ss_pred CCCCEEEEEEEeCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEE
Confidence 4 4578999999999999999753 34889999999999999999999999 999999999999999999999
Q ss_pred cccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 504 TNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 504 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
+|||+++........ ........++..|+|||.+.+..++.++|+||||+++|||++|+.||......+
T Consensus 148 ~dfg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------ 216 (264)
T cd06653 148 GDFGASKRIQTICMS-----GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA------ 216 (264)
T ss_pred Ccccccccccccccc-----CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH------
Confidence 999999875432110 011223568899999999999889999999999999999999999997533211
Q ss_pred HHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.+. ...........|......+.+++.+||. +|..||+..+++.
T Consensus 217 ~~~-------------~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 217 AIF-------------KIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHH-------------HHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 000 1111112233455666789999999999 5799999998875
No 320
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=6.5e-32 Score=282.17 Aligned_cols=236 Identities=25% Similarity=0.420 Sum_probs=191.6
Q ss_pred HHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 365 LKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 365 l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
.++|.|.| |.||++.. +++.+|+|.+.. .+.+|+.++++++|+|++++++++..++..++||||
T Consensus 26 ~~lg~g~~-------g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 26 IKIGEGST-------GIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred HHcCCCCC-------eEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 36899999 99999988 478899998742 366799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+++++|.+++... .+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 99 ~~~~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~ 169 (292)
T cd06657 99 LEGGALTDIVTHT------RMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 169 (292)
T ss_pred CCCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceecccc
Confidence 9999999988543 4899999999999999999999998 999999999999999999999999998765432
Q ss_pred ccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (669)
.. ......++..|+|||.+.+..++.++|+||||+++|||++|..||.+....+. ...
T Consensus 170 ~~--------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~---~~~----------- 227 (292)
T cd06657 170 VP--------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA---MKM----------- 227 (292)
T ss_pred cc--------cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHH-----------
Confidence 21 11234678899999999888899999999999999999999999976443211 000
Q ss_pred hhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 596 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+.....+.+. .....+..+.+++.+||+.||.+||++.+++..
T Consensus 228 --~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 228 --IRDNLPPKLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred --HHhhCCcccC--CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 0111111111 111234567899999999999999999999873
No 321
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.2e-32 Score=276.34 Aligned_cols=237 Identities=30% Similarity=0.474 Sum_probs=195.6
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
++.|+| |.||++... +..+++|.+.. .+.+|++++++++|+|++++.+.+..++..++|+||
T Consensus 8 l~~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 8 IGKGSF-------GKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred eccCCC-------eEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 789999 999999985 78899999853 266799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+++++|.+++.... .....+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 81 ADGGDLSQKIKKQK-KEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred cCCCcHHHHHHHhh-ccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 99999999998642 12367999999999999999999999998 999999999999999999999999999876443
Q ss_pred ccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (669)
. .......++..|+|||.+.+..++.++|+||||+++++|++|+.|+......+ .....
T Consensus 157 ~--------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~------~~~~~------- 215 (258)
T cd08215 157 V--------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE------LALKI------- 215 (258)
T ss_pred c--------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH------HHHHH-------
Confidence 2 12233467889999999999999999999999999999999999987543211 00000
Q ss_pred hhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 596 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
... . ....+......+.+++.+||..+|.+|||+.|+++.
T Consensus 216 --~~~----~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 216 --LKG----Q-YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred --hcC----C-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 0 122333455678999999999999999999999863
No 322
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.1e-32 Score=282.52 Aligned_cols=252 Identities=26% Similarity=0.395 Sum_probs=190.3
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc---------HHHHHHHHHhcCCCCceeEeeEEEec--CceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD---------VSSEINILKKINHSNIIRLSGFCVHE--GNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~---------~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV 432 (669)
++|.|.| |.||+|... ++.+++|.++.. +.+|++++++++|+|++++++++..+ +..++|
T Consensus 6 ~l~~g~~-------~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 6 QIGEGTY-------GQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred EeccCCC-------eEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEE
Confidence 3788999 999999984 688999998643 66799999999999999999999888 789999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++ +|.+++... ...+++..++.++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++...
T Consensus 79 ~e~~~~-~l~~~~~~~----~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~ 150 (287)
T cd07840 79 FEYMDH-DLTGLLDSP----EVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPY 150 (287)
T ss_pred eccccc-cHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeec
Confidence 999985 899998654 146899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... ....+......
T Consensus 151 ~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~---~~~~~~~~~~~ 220 (287)
T cd07840 151 TKRNS-------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE---QLEKIFELCGS 220 (287)
T ss_pred cCCCc-------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCC
Confidence 54321 11223456788999998765 467999999999999999999999997654321 11111111111
Q ss_pred hhHH--hhhhc-----------ccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 592 SNVR--EKLRG-----------FIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 592 ~~~~--~~l~~-----------~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.... ..... .....+.......++..+.+++++||+.||.+||+++++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 221 PTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred CchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000 00000 000000011111125678999999999999999999999853
No 323
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=4e-32 Score=281.20 Aligned_cols=236 Identities=24% Similarity=0.358 Sum_probs=188.2
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|+| |+||++.. +|+.+++|.+.. .+..|++++++++||||+++++++...+..++|||
T Consensus 1 lg~g~~-------g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 73 (277)
T cd05577 1 LGKGGF-------GEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMT 73 (277)
T ss_pred CCCCCc-------eeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEe
Confidence 467889 99999987 478899998742 24579999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++++|.+++.+.. ...+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||+++....
T Consensus 74 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~ 147 (277)
T cd05577 74 LMNGGDLKYHIYNVG---EPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKG 147 (277)
T ss_pred cCCCCcHHHHHHHcC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhcc
Confidence 999999999997642 246899999999999999999999999 99999999999999999999999999886543
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
... .....++..|+|||.+.++.++.++||||||++++||++|+.||......... ..+ .
T Consensus 148 ~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~----~---- 207 (277)
T cd05577 148 GKK---------IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK---EEL----K---- 207 (277)
T ss_pred CCc---------cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH---HHH----H----
Confidence 211 12245778899999999888999999999999999999999999754321000 000 0
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFV 641 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 641 (669)
.. ... .....+......+.+++.+||+.||.+|| ++.+++.
T Consensus 208 -~~---~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 208 -RR---TLE--MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred -hc---ccc--ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 00 000 11223334466789999999999999999 5555553
No 324
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-32 Score=289.06 Aligned_cols=243 Identities=28% Similarity=0.397 Sum_probs=194.6
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEECC-CeeEEEEecc---------cHHHHHHHHHhcC-CCCceeEeeEEEecC
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFKG-DDAAVKVMKG---------DVSSEINILKKIN-HSNIIRLSGFCVHEG 427 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g-~~vavK~~~~---------~~~~E~~~l~~l~-H~niv~l~g~~~~~~ 427 (669)
.|++.+ ++|.|+- .+||++...+ +.+|+|+... -+..|+..|.+|+ |.+||+|++|-..++
T Consensus 362 ~Yeilk-~iG~GGS-------SkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~ 433 (677)
T KOG0596|consen 362 EYEILK-QIGSGGS-------SKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG 433 (677)
T ss_pred hhhHHH-hhcCCCc-------ceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc
Confidence 455544 5899998 7899999854 4567776532 3778999999995 899999999999999
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
.+||||||-+. +|..+|++.. .....| .++.+..|++.++.++|+++ |||.||||.|+|+- +|++||+|||
T Consensus 434 ~lYmvmE~Gd~-DL~kiL~k~~---~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlV-kG~LKLIDFG 504 (677)
T KOG0596|consen 434 YLYMVMECGDI-DLNKILKKKK---SIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLV-KGRLKLIDFG 504 (677)
T ss_pred eEEEEeecccc-cHHHHHHhcc---CCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEE-eeeEEeeeec
Confidence 99999999865 9999998753 122335 78889999999999999999 99999999999986 5799999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccC-----------CCCchhhHHHHHHHHHHHHcCCCCCCCCchh
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-----------VITPKLDVFAFGVVVLELLSGREAVTGDQNC 576 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----------~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~ 576 (669)
+|..+..+.. .......+||..||+||.+... +.+.++||||+||+||+|+.|+.||..-.+
T Consensus 505 IA~aI~~DTT------sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n- 577 (677)
T KOG0596|consen 505 IANAIQPDTT------SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN- 577 (677)
T ss_pred hhcccCcccc------ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-
Confidence 9998876543 2334567999999999999532 256789999999999999999999863221
Q ss_pred HHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHH-HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDL-AFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~-~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
...++..++||...-+||.-- ..++.++|+.||+.||.+||+..|+++.
T Consensus 578 -----------------~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 578 -----------------QIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred -----------------HHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 124566778886544555322 2238999999999999999999999874
No 325
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=7.1e-32 Score=274.53 Aligned_cols=237 Identities=29% Similarity=0.402 Sum_probs=196.0
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec--CceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE--GNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~ 433 (669)
++.|+| |.||+|... +..+++|.++. .+.+|++++++++|+||+++++.+... ...++|+
T Consensus 8 i~~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 8 LGRGSF-------GSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred eeecCc-------eEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 788999 999999985 78899998753 356899999999999999999999888 7899999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||.+....
T Consensus 81 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 152 (260)
T cd06606 81 EYVSGGSLSSLLKKF-----GKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLG 152 (260)
T ss_pred EecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence 999999999999764 26999999999999999999999998 9999999999999999999999999998775
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
..... .......++..|+|||.+.+...+.++||||||++++||++|+.||....+.. ..
T Consensus 153 ~~~~~------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~------------- 212 (260)
T cd06606 153 DIETG------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM-AA------------- 212 (260)
T ss_pred ccccc------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-HH-------------
Confidence 54310 01233567889999999999889999999999999999999999998644211 00
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+............+...+..+.+++.+||+.||.+||++.|++..
T Consensus 213 ----~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 213 ----LYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred ----HHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 001111112233445557789999999999999999999999863
No 326
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=6.1e-32 Score=290.12 Aligned_cols=254 Identities=24% Similarity=0.329 Sum_probs=191.1
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
..|+..+ .+|.|.| |.||++.. .++.+|+|.++. .+.+|+.++++++|+||+++++++...
T Consensus 16 ~~y~~~~-~lg~g~~-------g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 87 (353)
T cd07850 16 KRYQNLK-PIGSGAQ-------GIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQ 87 (353)
T ss_pred cceEEEE-EeccCCC-------EEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccC
Confidence 3455444 4899999 99999987 578999999853 345799999999999999999998643
Q ss_pred ------CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCc
Q 005923 427 ------GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLR 500 (669)
Q Consensus 427 ------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~ 500 (669)
...++||||+. ++|.+++... +++..+..++.|++.||+|||+.+ ++||||||+||++++++.
T Consensus 88 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~-------l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~ 156 (353)
T cd07850 88 KSLEEFQDVYLVMELMD-ANLCQVIQMD-------LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCT 156 (353)
T ss_pred CCccccCcEEEEEeccC-CCHHHHHhhc-------CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCC
Confidence 34699999996 5898888532 889999999999999999999999 999999999999999999
Q ss_pred EEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHH
Q 005923 501 AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580 (669)
Q Consensus 501 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~ 580 (669)
+||+|||+++....... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||...+....
T Consensus 157 ~kL~Dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~-- 225 (353)
T cd07850 157 LKILDFGLARTAGTSFM---------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ-- 225 (353)
T ss_pred EEEccCccceeCCCCCC---------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHH--
Confidence 99999999986543211 1234578899999999999999999999999999999999999986543211
Q ss_pred HHHHHHHHHhhhhH--H----hhhh---------------cccCC----ccCCCCcHHHHHHHHHHHHHhcccCCCCCCC
Q 005923 581 LYASISRVLEESNV--R----EKLR---------------GFIDP----SLRNEYPLDLAFSMAQLAKNCTAHDLNARPS 635 (669)
Q Consensus 581 ~~~~~~~~~~~~~~--~----~~l~---------------~~~d~----~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 635 (669)
+..+...+..... . ..+. ..... ......+...+..+.+++.+||+.||.+|||
T Consensus 226 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 304 (353)
T cd07850 226 -WNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRIS 304 (353)
T ss_pred -HHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcC
Confidence 1111111110000 0 0000 00000 0001112234567889999999999999999
Q ss_pred HHHHHHH
Q 005923 636 ISEVFVT 642 (669)
Q Consensus 636 ~~evl~~ 642 (669)
+.|++..
T Consensus 305 ~~eiL~~ 311 (353)
T cd07850 305 VDDALQH 311 (353)
T ss_pred HHHHhcC
Confidence 9999965
No 327
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=9.4e-32 Score=286.72 Aligned_cols=263 Identities=26% Similarity=0.396 Sum_probs=194.5
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhc-CCCCceeEeeEEEec
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKI-NHSNIIRLSGFCVHE 426 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l-~H~niv~l~g~~~~~ 426 (669)
.|++.+ .+|.|.| |.||+|.. .++.+|+|++.. .+.+|+.+++++ +|+||++++++|...
T Consensus 8 ~y~~~~-~lg~g~~-------~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~ 79 (337)
T cd07852 8 KYEILQ-KLGKGAY-------GIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE 79 (337)
T ss_pred HHHHhH-hhcCCCC-------eeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC
Confidence 456655 4899999 99999987 477899998742 255799999999 999999999998654
Q ss_pred --CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc
Q 005923 427 --GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504 (669)
Q Consensus 427 --~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 504 (669)
...++||||++ ++|.+++... .++|..+..++.||+.||+|||+.+ ++||||||+|||+++++.+||+
T Consensus 80 ~~~~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~ 149 (337)
T cd07852 80 NDKDIYLVFEYME-TDLHAVIRAN------ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLA 149 (337)
T ss_pred CCceEEEEecccc-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEe
Confidence 35799999997 5999998642 5889999999999999999999998 9999999999999999999999
Q ss_pred ccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
|||+++.......... ........|+..|+|||.+.+ ..++.++||||||+++|||++|+.||.+....+.. .
T Consensus 150 d~g~~~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~---~ 223 (337)
T cd07852 150 DFGLARSLSELEENPE---NPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQL---E 223 (337)
T ss_pred eccchhcccccccccc---CcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHH---H
Confidence 9999987654321100 112234568899999998865 56789999999999999999999999764432211 1
Q ss_pred HHHHHHh-----------hhhHHhhhhcccCC---ccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHh
Q 005923 584 SISRVLE-----------ESNVREKLRGFIDP---SLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT--LSKI 646 (669)
Q Consensus 584 ~~~~~~~-----------~~~~~~~l~~~~d~---~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~~i 646 (669)
.+..... .......+...... ......+ ..+.++.+++.+||+.||.+|||+.+++.. ++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 224 KIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLP-KASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred HHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhcc-CCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 1111100 00000111111110 0001111 245678999999999999999999999976 5554
No 328
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=6.1e-32 Score=278.55 Aligned_cols=232 Identities=23% Similarity=0.351 Sum_probs=184.2
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecccHH--HHHHHHHhc-CCCCceeEeeEEEecCceeEEEEecCCCC
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDVS--SEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGA 440 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~~~--~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gs 440 (669)
++|.|.| |.||++.. .+..+|+|..+.... .|+.....+ +|+|++++++++..++..++||||+++|+
T Consensus 23 ~lg~g~~-------g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~ 95 (267)
T PHA03390 23 KLIDGKF-------GKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGD 95 (267)
T ss_pred eecCCCc-------eEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCc
Confidence 4799999 99999987 477889999865322 244333333 79999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC-cEEEcccCCccccCCCcccc
Q 005923 441 LSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL-RAKITNFGLARSAESDEHEQ 519 (669)
Q Consensus 441 L~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~-~~kl~DfGla~~~~~~~~~~ 519 (669)
|.++++.. ..++|..+..++.|++.||.|||+.+ ++||||||+||+++.++ .++|+|||+++......
T Consensus 96 L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~--- 164 (267)
T PHA03390 96 LFDLLKKE-----GKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS--- 164 (267)
T ss_pred HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc---
Confidence 99999764 26999999999999999999999999 99999999999999988 99999999987654321
Q ss_pred CCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhh
Q 005923 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLR 599 (669)
Q Consensus 520 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 599 (669)
...++..|+|||++.+..++.++||||||+++|||++|+.||......+... .... ..
T Consensus 165 ---------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~--~~~~---------~~-- 222 (267)
T PHA03390 165 ---------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL--ESLL---------KR-- 222 (267)
T ss_pred ---------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH--HHHH---------Hh--
Confidence 1357889999999999999999999999999999999999998543221000 0000 00
Q ss_pred cccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC-HHHHHH
Q 005923 600 GFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS-ISEVFV 641 (669)
Q Consensus 600 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-~~evl~ 641 (669)
... ....+......+.+++.+||+.||.+||+ ++|+++
T Consensus 223 --~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 223 --QQK--KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred --hcc--cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 000 11222345567899999999999999996 688874
No 329
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.8e-32 Score=284.65 Aligned_cols=266 Identities=21% Similarity=0.348 Sum_probs=189.8
Q ss_pred ccccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 357 LTLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 357 ~~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
+..|+... ++|.|.| |.||++.. +++.+|||.+.. .+.+|++++++++||||++++++|..
T Consensus 11 ~~~y~~~~-~lg~g~~-------~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 82 (310)
T cd07865 11 VSKYEKLA-KIGQGTF-------GEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 82 (310)
T ss_pred hhheEEEE-EeecCCC-------EEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEec
Confidence 34455544 4899999 99999997 478899998742 23579999999999999999999876
Q ss_pred cC--------ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC
Q 005923 426 EG--------NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497 (669)
Q Consensus 426 ~~--------~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~ 497 (669)
.+ ..++||||+.+ +|.+++... ...+++..++.++.|++.||+|||+++ ++|+||||+||+++.
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~ 154 (310)
T cd07865 83 KATPYNRYKGSFYLVFEFCEH-DLAGLLSNK----NVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITK 154 (310)
T ss_pred ccccccCCCceEEEEEcCCCc-CHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECC
Confidence 54 34999999974 898888653 235899999999999999999999998 999999999999999
Q ss_pred CCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchh
Q 005923 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNC 576 (669)
Q Consensus 498 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~ 576 (669)
++.+||+|||++.......... ........++..|+|||.+.+. .++.++||||||+++|||++|+.|+.+....
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~ 230 (310)
T cd07865 155 DGILKLADFGLARAFSLSKNSK----PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ 230 (310)
T ss_pred CCcEEECcCCCcccccCCcccC----CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999999999998764332110 0112334678899999998764 4788999999999999999999998765432
Q ss_pred HHHHHHHHHHHHHhhhh-----HHhhhhcccCCc-cCCCC-----cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 577 EAELLYASISRVLEESN-----VREKLRGFIDPS-LRNEY-----PLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 577 ~~~~~~~~~~~~~~~~~-----~~~~l~~~~d~~-l~~~~-----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
........+........ .......+..+. ..... +......+.+++.+||+.||.+|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 231 HQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred HHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 21111111110000000 000000000000 00000 00112356799999999999999999999853
No 330
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.9e-32 Score=280.24 Aligned_cols=233 Identities=27% Similarity=0.346 Sum_probs=191.9
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.++.|+| |.||++..+ +..+|+|.+.. .+.+|++++++++||||+++++++.++...++|+
T Consensus 7 ~i~~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 7 VIGKGAF-------GKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred EeccCCC-------ceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence 3789999 999999985 78999998852 3567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+.+++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++....
T Consensus 80 e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~ 151 (258)
T cd05578 80 DLLLGGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVT 151 (258)
T ss_pred eCCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccC
Confidence 999999999999754 36899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
.... .....|+..|+|||.+.+..++.++|+||||+++|+|++|+.|+............
T Consensus 152 ~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----------- 211 (258)
T cd05578 152 PDTL---------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIR----------- 211 (258)
T ss_pred CCcc---------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHH-----------
Confidence 4321 12345788999999999888999999999999999999999999865431111110
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCH--HHHH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI--SEVF 640 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~--~evl 640 (669)
..... .....+...+..+.+++.+||+.||.+||++ +|++
T Consensus 212 --~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 212 --AKQET-----ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred --HHhcc-----ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 00000 1123344455788999999999999999999 5554
No 331
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.1e-31 Score=278.39 Aligned_cols=243 Identities=23% Similarity=0.345 Sum_probs=187.7
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc----------HHHHHH---HHHhcCCCCceeEeeEEEecCceeE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD----------VSSEIN---ILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~----------~~~E~~---~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
+|.|+| |.||++.. .++.||+|.+... +..|.. .++..+||||+++.+++..++..++
T Consensus 2 ig~g~~-------g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 74 (278)
T cd05606 2 IGRGGF-------GEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF 74 (278)
T ss_pred cccCCC-------eEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEE
Confidence 688999 99999987 4788999987431 223333 3444579999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
||||+++|+|.+++... +.+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++.
T Consensus 75 v~e~~~g~~L~~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 75 ILDLMNGGDLHYHLSQH-----GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 99999999999998653 46999999999999999999999998 99999999999999999999999999876
Q ss_pred cCCCccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
..... .....|+..|+|||.+.++ .++.++||||||+++|||++|+.||...........
T Consensus 147 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~--------- 207 (278)
T cd05606 147 FSKKK----------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI--------- 207 (278)
T ss_pred cCccC----------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH---------
Confidence 53321 1224688999999999754 689999999999999999999999975432111000
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHhhcCCCCCCC
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVTLSKIWSSSSDWDP 655 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~L~~i~~~~~~~~~ 655 (669)
...... .....+...+..+.+++.+||..||.+|| ++.|+++. -+-...+|+.
T Consensus 208 -----~~~~~~----~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~---~~~~~~~~~~ 265 (278)
T cd05606 208 -----DRMTLT----MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH---PFFRSLDWQM 265 (278)
T ss_pred -----HHHhhc----cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC---ccccCCCchH
Confidence 000000 11223334456789999999999999999 88888753 2233455554
No 332
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.2e-31 Score=282.30 Aligned_cols=258 Identities=26% Similarity=0.356 Sum_probs=191.3
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
..|++.+ .+|.|.| |.||+|.. .|+.||+|.++. .+.+|+.++++++|+||+++++++...
T Consensus 7 ~~y~~~~-~ig~g~~-------~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 78 (309)
T cd07845 7 TEFEKLN-RIGEGTY-------GIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK 78 (309)
T ss_pred cceeEee-eeeecCC-------EEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC
Confidence 3455444 3899999 99999998 478999999852 245799999999999999999998755
Q ss_pred --CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc
Q 005923 427 --GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504 (669)
Q Consensus 427 --~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 504 (669)
+..++||||+.+ +|.+++...+ ..+++.++..++.|++.||+|||+.+ ++||||||+||++++++.+||+
T Consensus 79 ~~~~~~lv~e~~~~-~l~~~l~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~ 150 (309)
T cd07845 79 HLDSIFLVMEYCEQ-DLASLLDNMP----TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIA 150 (309)
T ss_pred CCCeEEEEEecCCC-CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEC
Confidence 467999999974 8999987542 46999999999999999999999999 9999999999999999999999
Q ss_pred ccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
|||+++....... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+....+. ..
T Consensus 151 dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~---~~ 219 (309)
T cd07845 151 DFGLARTYGLPAK--------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQ---LD 219 (309)
T ss_pred ccceeeecCCccC--------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HH
Confidence 9999987653221 1112345778999999875 5578999999999999999999999986554221 11
Q ss_pred HHHHHHhhhhH--Hhhhh------cccCCccCCC----CcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 584 SISRVLEESNV--REKLR------GFIDPSLRNE----YPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 584 ~~~~~~~~~~~--~~~l~------~~~d~~l~~~----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+...+..... ...++ .+.-+.-... ........+.+++.+||+.||.+|||+.|++.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 220 LIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred HHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 11111111000 00000 0000000000 001134567899999999999999999999864
No 333
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.98 E-value=8e-32 Score=281.32 Aligned_cols=256 Identities=25% Similarity=0.399 Sum_probs=188.3
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCc
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGN 428 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 428 (669)
|++.+ +++.|.| |.||+|..+ |+.+++|.++. .+.+|++++++++|+||+++++++..+..
T Consensus 4 y~~~~-~l~~g~~-------~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 75 (294)
T PLN00009 4 YEKVE-KIGEGTY-------GVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKR 75 (294)
T ss_pred eEEEE-EecCCCC-------EEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCe
Confidence 33333 4789999 999999974 77899998742 36689999999999999999999999999
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC-CCcEEEcccC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT-NLRAKITNFG 507 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~-~~~~kl~DfG 507 (669)
.++||||++ ++|.+++... ....+++..+..++.||+.||+|||+++ ++||||+|+||++++ ++.+||+|||
T Consensus 76 ~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 76 LYLVFEYLD-LDLKKHMDSS---PDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred EEEEEeccc-ccHHHHHHhC---CCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccc
Confidence 999999996 5888888653 2234688899999999999999999998 999999999999985 5679999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
+++....... ......++..|+|||++.+. .++.++||||||+++|||++|+.||......+. ... +.
T Consensus 149 ~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~--~~~-~~ 217 (294)
T PLN00009 149 LARAFGIPVR--------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE--LFK-IF 217 (294)
T ss_pred cccccCCCcc--------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHH-HH
Confidence 9976543211 11234568899999998764 578999999999999999999999976543211 111 11
Q ss_pred HHHhhhhHHhhhh------cccC--CccCC----CCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 587 RVLEESNVREKLR------GFID--PSLRN----EYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 587 ~~~~~~~~~~~l~------~~~d--~~l~~----~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
....... ..... .... +.... ........++.+++.+|++.||.+||++.++++.
T Consensus 218 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 218 RILGTPN-EETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred HHhCCCC-hhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1110000 00000 0000 00000 0011234568899999999999999999999863
No 334
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-33 Score=274.79 Aligned_cols=243 Identities=23% Similarity=0.399 Sum_probs=203.3
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-----cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-----DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-----~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
+|.+-+ ++|+|+| |+||++.. .|+.+|||.+.- ++.+|+.+|++...+++|+++|.+.....+|+
T Consensus 34 VFDi~~-KLGEGSY-------GSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWI 105 (502)
T KOG0574|consen 34 VFDIVG-KLGEGSY-------GSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWI 105 (502)
T ss_pred HHHHHH-HhcCCcc-------hHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEe
Confidence 455544 6999999 99999987 488999999853 46789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
||||+-.|+..|.++-+ .++|++..+..++.+-+.||+|||... -+|||||+.|||++.+|.+|++|||.|..
T Consensus 106 VMEYCGAGSiSDI~R~R----~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQ 178 (502)
T KOG0574|consen 106 VMEYCGAGSISDIMRAR----RKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQ 178 (502)
T ss_pred ehhhcCCCcHHHHHHHh----cCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccch
Confidence 99999999999999865 367999999999999999999999988 89999999999999999999999999987
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
+...- ...+.+.||+.|||||++..-.|..++||||+|+...||..|+.|+.+.....
T Consensus 179 LTDTM--------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR-------------- 236 (502)
T KOG0574|consen 179 LTDTM--------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR-------------- 236 (502)
T ss_pred hhhhH--------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc--------------
Confidence 64321 22456899999999999999999999999999999999999999997533210
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
....--..|.--...|+.-..++-++++.||-++|++|-|+.+++++
T Consensus 237 ----AIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 237 ----AIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ----eeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 00000011111224566777889999999999999999999988764
No 335
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.98 E-value=6.5e-32 Score=280.01 Aligned_cols=251 Identities=26% Similarity=0.408 Sum_probs=189.4
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc--------HHHHHHHHHhcC-CCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD--------VSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~--------~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e 434 (669)
.+|.|.| |.||+|.. .++.+++|.++.. ..+|+..+++++ |+|++++++++..++..++|||
T Consensus 6 ~ig~g~~-------g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 6 QLGDGTF-------GSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred eeccCCc-------eEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 3899999 99999998 4678999987542 346889999999 9999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+ +|+|.+++.... ...+++.++..++.|++.+|.|||+++ ++|+||+|+||++++++.++|+|||++.....
T Consensus 79 ~~-~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~ 151 (283)
T cd07830 79 YM-EGNLYQLMKDRK---GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRS 151 (283)
T ss_pred cC-CCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence 99 789999997642 246899999999999999999999999 99999999999999999999999999986543
Q ss_pred CccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... .....++..|+|||.+.. ..++.++|+||||+++|||++|+.||......+.. ..+...+....
T Consensus 152 ~~~---------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~---~~~~~~~~~~~ 219 (283)
T cd07830 152 RPP---------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQL---YKICSVLGTPT 219 (283)
T ss_pred CCC---------cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHH---HHHHHhcCCCC
Confidence 221 122457889999998854 55799999999999999999999998765432211 11111111100
Q ss_pred H-----HhhhhcccCCccC-------CCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 594 V-----REKLRGFIDPSLR-------NEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 594 ~-----~~~l~~~~d~~l~-------~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. ...+...++..+. ..........+.+++++||+.||.+|||++|++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 220 KQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred hhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0 0000001110000 00001114568999999999999999999999753
No 336
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.98 E-value=1.1e-31 Score=271.91 Aligned_cols=236 Identities=30% Similarity=0.514 Sum_probs=192.9
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
.++.|.| |.||++... +..+++|+.+. ++.+|++++++++|+|++++++++..+...++++||+
T Consensus 7 ~l~~g~~-------~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 7 KIGKGGF-------GEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred eeccCCc-------eEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence 3788999 999999985 78899998853 3668999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
++++|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||.+.......
T Consensus 80 ~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 80 SGGSLKDLLKSTN----QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred CCCcHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 9999999997642 46899999999999999999999988 9999999999999999999999999998765432
Q ss_pred cccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHh
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVRE 596 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (669)
. .....++..|+|||.+.+..++.++||||||++++||++|+.|+.......... .
T Consensus 153 ~---------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~------------ 208 (253)
T cd05122 153 A---------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF---K------------ 208 (253)
T ss_pred c---------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH---H------------
Confidence 1 233567889999999998889999999999999999999999987543211100 0
Q ss_pred hhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 597 KLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 597 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.....-+.+ ..+...+..+.+++.+||+.||.+|||+.|++++
T Consensus 209 -~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 209 -IATNGPPGL--RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred -HHhcCCCCc--CcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000000011 1111224578999999999999999999999863
No 337
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.98 E-value=2.1e-31 Score=281.09 Aligned_cols=231 Identities=28% Similarity=0.451 Sum_probs=185.8
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
++|.|+| |.||+|.. .++.+++|.+.. ++.+|++++++++|+|++++++++.++...++||
T Consensus 28 ~lg~g~~-------g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 100 (313)
T cd06633 28 EIGHGSF-------GAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVM 100 (313)
T ss_pred eeccCCC-------eEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEE
Confidence 4899999 99999987 578899998752 3567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+. |+|.+++... ...+++.+++.++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++....
T Consensus 101 e~~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~ 172 (313)
T cd06633 101 EYCL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSS 172 (313)
T ss_pred ecCC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccC
Confidence 9996 5888888653 245899999999999999999999999 9999999999999999999999999986432
Q ss_pred CCccccCCcccceeeecccccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIE---NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
.. ....|+..|+|||.+. .+.++.++||||||+++|||++|..|+.......... ....
T Consensus 173 ~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~------~~~~ 234 (313)
T cd06633 173 PA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY------HIAQ 234 (313)
T ss_pred CC------------CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH------HHHh
Confidence 21 1246788999999984 4668899999999999999999999987654321100 0000
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.. .+.. .....+..+.+++.+||+.+|.+||++.+++..
T Consensus 235 -----~~-----~~~~---~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 235 -----ND-----SPTL---QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -----cC-----CCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0111 111233468899999999999999999999864
No 338
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.98 E-value=5.7e-32 Score=276.97 Aligned_cols=242 Identities=23% Similarity=0.393 Sum_probs=190.3
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc------------cHHHHHHHHHhcCCCCceeEeeEEEe
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG------------DVSSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~------------~~~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
|.+.+ ++|.|+| |.||++... +..+++|.++. ++..|+.++++++||||+++++++.+
T Consensus 2 y~i~~-~ig~g~~-------g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 73 (260)
T cd08222 2 YILQQ-RLGKGSF-------GTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE 73 (260)
T ss_pred ceeee-eecCCCC-------ceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc
Confidence 34444 4899999 999999874 34456666542 24568899999999999999999998
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcc
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 505 (669)
....++||||+++++|.+++...+ .....+++..++.++.|++.||.|||+.+ ++|+||+|+||++++ +.+||+|
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d 148 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELK-HTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGD 148 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHh-hcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecc
Confidence 889999999999999999987532 23357999999999999999999999998 999999999999975 5699999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 585 (669)
||+++....... ......++..|+|||.+.+..++.++|+||||+++|+|++|..|+....... ..
T Consensus 149 ~g~~~~~~~~~~--------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~------~~ 214 (260)
T cd08222 149 FGVSRLLMGSCD--------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS------VV 214 (260)
T ss_pred cCceeecCCCcc--------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH------HH
Confidence 999987643221 1223457889999999988889999999999999999999999986533211 11
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.... . ......+...+.++.+++.+||+.||.+||++.|+++.
T Consensus 215 ~~~~----------~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 215 LRIV----------E----GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred HHHH----------c----CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 1110 0 01122344556688999999999999999999999863
No 339
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.98 E-value=4.5e-32 Score=289.09 Aligned_cols=261 Identities=26% Similarity=0.410 Sum_probs=192.5
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecC--
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEG-- 427 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~-- 427 (669)
|++.+ .+|.|+| |.||+|.. .|+.||+|.++. .+.+|+.++++++|+||+++++++....
T Consensus 7 y~i~~-~lg~G~~-------g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 78 (336)
T cd07849 7 YQNLS-YIGEGAY-------GMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFE 78 (336)
T ss_pred eEEEE-EEEecCC-------eEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccccc
Confidence 44444 3899999 99999987 478899998752 2567999999999999999999876443
Q ss_pred ---ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc
Q 005923 428 ---NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504 (669)
Q Consensus 428 ---~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 504 (669)
..++|+||+.+ +|.+++.. ..+++..+..++.|++.||+|||+.+ ++||||||+|||+++++.+||+
T Consensus 79 ~~~~~~lv~e~~~~-~l~~~~~~------~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~ 148 (336)
T cd07849 79 SFNDVYIVQELMET-DLYKLIKT------QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKIC 148 (336)
T ss_pred ccceEEEEehhccc-CHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEC
Confidence 47999999974 88888754 35899999999999999999999999 9999999999999999999999
Q ss_pred ccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
|||+++......... .......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||.+..... ...
T Consensus 149 dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~---~~~ 220 (336)
T cd07849 149 DFGLARIADPEHDHT-----GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH---QLN 220 (336)
T ss_pred cccceeecccccccc-----CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHH
Confidence 999998754322111 11233568899999998754 568999999999999999999999997644211 111
Q ss_pred HHHHHHhhhhHHhhhhcccCCcc---------CCCCc-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHhh
Q 005923 584 SISRVLEESNVREKLRGFIDPSL---------RNEYP-----LDLAFSMAQLAKNCTAHDLNARPSISEVFVT--LSKIW 647 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~d~~l---------~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~~i~ 647 (669)
.+...+..... +.+..+.+... ....+ .....++.+++.+||+.||.+|||+.|+++. |+...
T Consensus 221 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 221 LILGVLGTPSQ-EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HHHHHcCCCCH-HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 11111111110 11111111000 00000 1224568899999999999999999999987 65544
No 340
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.98 E-value=1e-31 Score=279.95 Aligned_cols=238 Identities=24% Similarity=0.367 Sum_probs=187.6
Q ss_pred HHHhCCCCcccceeeEEEEEEE-----CCCeeEEEEecc-----------cHHHHHHHHHhc-CCCCceeEeeEEEecCc
Q 005923 366 KIATGSFSEENRIQGSVYRGSF-----KGDDAAVKVMKG-----------DVSSEINILKKI-NHSNIIRLSGFCVHEGN 428 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~-----~g~~vavK~~~~-----------~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 428 (669)
.+|.|+| |.||++.. +|..+|+|+++. .+.+|+++++++ +|+||+++++++..+..
T Consensus 7 ~lg~G~~-------g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~ 79 (290)
T cd05613 7 VLGTGAY-------GKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTK 79 (290)
T ss_pred eeccCCc-------ceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCe
Confidence 3899999 99999886 578899998853 245799999999 59999999999998889
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+|||+++++.+||+|||+
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~ 151 (290)
T cd05613 80 LHLILDYINGGELFTHLSQR-----ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGL 151 (290)
T ss_pred EEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcc
Confidence 99999999999999999754 35889999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeecccccccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG--VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
++....... .......|+..|+|||.+.+. .++.++||||||+++|||++|+.|+.......... ....
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~--~~~~ 222 (290)
T cd05613 152 SKEFHEDEV-------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQA--EISR 222 (290)
T ss_pred ceecccccc-------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHH--HHHH
Confidence 987543221 112235688899999998753 46889999999999999999999986432211000 0000
Q ss_pred HHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005923 587 RVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP-----SISEVFVT 642 (669)
Q Consensus 587 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 642 (669)
.+.. ...+++......+.+++.+||+.||.+|| ++.+++..
T Consensus 223 -------------~~~~--~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 223 -------------RILK--SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred -------------Hhhc--cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 0000 01223444566789999999999999997 66666543
No 341
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.98 E-value=2.1e-31 Score=278.56 Aligned_cols=254 Identities=17% Similarity=0.228 Sum_probs=180.8
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEECCC-----eeEEEEecc---cHH---------------HHHHHHHhcCCCC
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFKGD-----DAAVKVMKG---DVS---------------SEINILKKINHSN 415 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g~-----~vavK~~~~---~~~---------------~E~~~l~~l~H~n 415 (669)
.|++.++ +|.|+| |.||+|...+. .+++|.... .+. .+...+..++|+|
T Consensus 13 ~y~i~~~-LG~G~f-------G~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~ 84 (294)
T PHA02882 13 EWKIDKL-IGCGGF-------GCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLG 84 (294)
T ss_pred ceEEeeE-EecCCC-------ceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCC
Confidence 4666664 899999 99999998543 556665321 111 1223445568999
Q ss_pred ceeEeeEEEecC----ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCC
Q 005923 416 IIRLSGFCVHEG----NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491 (669)
Q Consensus 416 iv~l~g~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~ 491 (669)
++++++++.... ..++++|++.. ++.+.+... ...++..+..|+.|++.||+|||+.+ ++||||||+
T Consensus 85 i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~ 155 (294)
T PHA02882 85 IPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRI-----KCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPE 155 (294)
T ss_pred CCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhh-----ccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHH
Confidence 999999876543 34678887753 777776543 23578889999999999999999998 999999999
Q ss_pred CeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCC
Q 005923 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571 (669)
Q Consensus 492 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~ 571 (669)
|||++.++.+||+|||+++.......... ..........||..|+|||.+.+..++.++|||||||++|||++|+.||.
T Consensus 156 Nill~~~~~~~l~DFGla~~~~~~~~~~~-~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~ 234 (294)
T PHA02882 156 NIMVDGNNRGYIIDYGIASHFIIHGKHIE-YSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWK 234 (294)
T ss_pred HEEEcCCCcEEEEEcCCceeeccCCcccc-cccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999987643221100 00111223469999999999999999999999999999999999999998
Q ss_pred CCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 572 GDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
+......... .... +.+..+..... ....++..+.+++..||..+|.+||++.++.+.|
T Consensus 235 ~~~~~~~~~~-~~~~---------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 235 GFGHNGNLIH-AAKC---------DFIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred ccccchHHHH-HhHH---------HHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 6532211110 0000 01111111111 1122356789999999999999999999999876
No 342
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.98 E-value=2.3e-31 Score=280.10 Aligned_cols=233 Identities=27% Similarity=0.416 Sum_probs=186.9
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.++.|.| |.||+|.. ++..+++|.+.. ++.+|++++++++|+|++++.+++..+...++||
T Consensus 22 ~lg~g~~-------g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 22 EIGHGSF-------GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred heeeCCC-------EEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 4899999 99999997 467899998742 3567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+. |+|.+++.... ..+++.++..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||++....
T Consensus 95 e~~~-~~l~~~~~~~~----~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 95 EYCL-GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166 (308)
T ss_pred EccC-CCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeec
Confidence 9996 68888876432 35899999999999999999999998 9999999999999999999999999987653
Q ss_pred CCccccCCcccceeeecccccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIE---NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
.. ....++..|+|||.+. .+.++.++||||||+++|||++|+.|+......+. ... ..
T Consensus 167 ~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~----~~- 227 (308)
T cd06634 167 PA------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYH----IA- 227 (308)
T ss_pred Cc------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH--HHH----Hh-
Confidence 32 1235788999999974 35688899999999999999999999875432111 000 00
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 644 (669)
+. ..+. ..+......+.+++.+||+.+|.+||++.+++....
T Consensus 228 --------~~-~~~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 228 --------QN-ESPA---LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred --------hc-CCCC---cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 00 0011 112234566899999999999999999999997644
No 343
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.1e-32 Score=290.84 Aligned_cols=237 Identities=26% Similarity=0.427 Sum_probs=192.6
Q ss_pred HHHhCCCCcccceeeEEEEEEECCC--eeEEEEec-------ccHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKGD--DAAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g~--~vavK~~~-------~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
++|.|.| |+||++..+.. ..|-|++. .|+.-|++||....||+||+|++.|..++.++++.|||
T Consensus 39 ELGDGAF-------GKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 39 ELGDGAF-------GKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred hhcCccc-------hhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 5899999 99999998643 34667763 36778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
.||-....+-. .+..|++.++.-+++|+++||.|||+++ |||||||+.|||++-+|.++|+|||.+.......
T Consensus 112 ~GGAVDaimlE----L~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~ 184 (1187)
T KOG0579|consen 112 GGGAVDAIMLE----LGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR 184 (1187)
T ss_pred CCchHhHHHHH----hccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchhHH
Confidence 99999887753 3467999999999999999999999999 9999999999999999999999999987654321
Q ss_pred cccCCcccceeeecccccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYIE-----NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
+......||+.|||||+.. ...|..++||||||++|.||..+..|...-+.. ..+.++
T Consensus 185 --------qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM------RVllKi--- 247 (1187)
T KOG0579|consen 185 --------QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKI--- 247 (1187)
T ss_pred --------hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH------HHHHHH---
Confidence 2234578999999999875 478999999999999999999999887643321 111111
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
..--.|.+ -.|..-...+.+++.+||..||..||++.+++++
T Consensus 248 -------aKSePPTL--lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 248 -------AKSEPPTL--LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred -------hhcCCCcc--cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 11111222 2345556678999999999999999999998864
No 344
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.98 E-value=3.6e-31 Score=281.91 Aligned_cols=257 Identities=24% Similarity=0.302 Sum_probs=190.7
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------------------cHHHHHHHHHhcCCCCceeEeeE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------------------DVSSEINILKKINHSNIIRLSGF 422 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------------------~~~~E~~~l~~l~H~niv~l~g~ 422 (669)
.+|.|+| |.||+|.. .++.+|||.++. .+.+|++++++++|+||++++++
T Consensus 16 ~ig~G~~-------g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 16 HLGEGTY-------GKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred cccCCCc-------eeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 4899999 99999986 478899998753 25679999999999999999999
Q ss_pred EEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEE
Q 005923 423 CVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAK 502 (669)
Q Consensus 423 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~k 502 (669)
+..++..++||||+. |+|.+++... ..+++.....++.|++.||+|||+.+ ++|+||+|+||+++.++.+|
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDRK-----IRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEE
Confidence 999999999999997 6999998653 35899999999999999999999999 99999999999999999999
Q ss_pred EcccCCccccCCCccccCC------cccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCch
Q 005923 503 ITNFGLARSAESDEHEQGG------YGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQN 575 (669)
Q Consensus 503 l~DfGla~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~ 575 (669)
|+|||+++........... ..........++..|+|||.+.+. .++.++||||||+++|||++|+.||.+..+
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999999876522110000 000111223467889999998764 468999999999999999999999986554
Q ss_pred hHHHHHHHHHHHHHhhhhHHh-----hhh------cccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 576 CEAELLYASISRVLEESNVRE-----KLR------GFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~-----~l~------~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+ ....+...+....... .+. ....+... ........++.+++.+||+.||.+||+++|++..
T Consensus 240 ~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 240 ID---QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HH---HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 22 1122222221111000 000 00000000 0011234568899999999999999999999964
No 345
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.98 E-value=1.6e-31 Score=279.97 Aligned_cols=256 Identities=27% Similarity=0.397 Sum_probs=189.9
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
.|++.+ .++.|.| |.||+|.. +|+.+|+|.++. .+.+|++++++++||||+++++++.+..
T Consensus 8 ~~~~~~-~lg~g~~-------g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~ 79 (302)
T cd07864 8 KFDIIG-QIGEGTY-------GQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQ 79 (302)
T ss_pred hhheee-eecccCC-------EEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcc
Confidence 344444 4899999 99999998 478899999853 2567999999999999999999987654
Q ss_pred ----------ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC
Q 005923 428 ----------NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497 (669)
Q Consensus 428 ----------~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~ 497 (669)
..++|+||+++ +|.+++... ...+++.+++.++.|++.||+|||+.+ ++||||+|+||++++
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~ 151 (302)
T cd07864 80 DALDFKKDKGAFYLVFEYMDH-DLMGLLESG----LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNN 151 (302)
T ss_pred hhhhccccCCcEEEEEcccCc-cHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECC
Confidence 78999999986 787877643 246899999999999999999999998 999999999999999
Q ss_pred CCcEEEcccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchh
Q 005923 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576 (669)
Q Consensus 498 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~ 576 (669)
++.+||+|||++........ .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......
T Consensus 152 ~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~ 224 (302)
T cd07864 152 KGQIKLADFGLARLYNSEES-------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL 224 (302)
T ss_pred CCcEEeCcccccccccCCcc-------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 99999999999987644321 11112345778999998865 45789999999999999999999998754332
Q ss_pred HHHHHHHHHHHHHhhhhHHhhhhcccC--------------CccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 577 EAELLYASISRVLEESNVREKLRGFID--------------PSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~l~~~~d--------------~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+ . ...+......... .....+.. ...+.. ....+..+.+++.+||+.||.+||++++++..
T Consensus 225 ~--~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 225 A--Q-LELISRLCGSPCP-AVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred H--H-HHHHHHHhCCCCh-hhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1 1 1111111111100 00000000 001011 11235678999999999999999999999853
No 346
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.98 E-value=1.1e-31 Score=280.68 Aligned_cols=241 Identities=23% Similarity=0.430 Sum_probs=185.4
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhcC-CCCceeEeeEEEecCc
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKIN-HSNIIRLSGFCVHEGN 428 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l~-H~niv~l~g~~~~~~~ 428 (669)
|++.+ .++.|.| |.||+|..+ ++.+|||.++. ++..|+.++.+.. |+||++++++|..+..
T Consensus 17 ~~~~~-~lg~g~~-------~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~ 88 (296)
T cd06618 17 LENLG-EIGSGTC-------GQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD 88 (296)
T ss_pred heeee-EeeccCC-------eEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCe
Confidence 34434 4899999 999999996 88999999863 2345676666665 9999999999999999
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~-~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
.++||||+. ++|.+++... ...+++..+.+++.|++.||+|||+ .+ ++||||+|+||++++++.+||+|||
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRI----QGPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred EEEEeeccC-cCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccc
Confidence 999999985 4787777543 2369999999999999999999997 47 9999999999999999999999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccCC----CCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV----ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
++........ .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... .+
T Consensus 161 ~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~ 226 (296)
T cd06618 161 ISGRLVDSKA---------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-----FE 226 (296)
T ss_pred cchhccCCCc---------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-----HH
Confidence 9876543221 11234678899999997654 789999999999999999999998643211 01
Q ss_pred HHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.....+... .+.+ .....++.++.+++.+||+.||.+||++.+++.+
T Consensus 227 ~~~~~~~~~----------~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 227 VLTKILQEE----------PPSL--PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHHHHhcCC----------CCCC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111111110 0011 1111345678999999999999999999999866
No 347
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.98 E-value=2.3e-31 Score=270.63 Aligned_cols=233 Identities=28% Similarity=0.480 Sum_probs=192.3
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
.++.|.| |.||++.. .++.+++|.+.. .+.+|++++++++|+|++++++++.+++..++|||
T Consensus 7 ~l~~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 7 LIGRGAF-------GVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred EEcccCC-------eEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 3789999 99999987 467899998753 35789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 151 (254)
T cd06627 80 YAENGSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLND 151 (254)
T ss_pred cCCCCcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCC
Confidence 99999999999754 46899999999999999999999998 99999999999999999999999999987754
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.... .....++..|+|||.+.+..++.++|||++|+++|||++|+.|+........ ... ..
T Consensus 152 ~~~~--------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~--~~~----~~----- 212 (254)
T cd06627 152 VSKD--------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA--LFR----IV----- 212 (254)
T ss_pred Cccc--------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH--HHH----Hh-----
Confidence 3211 1234678899999999888899999999999999999999999875432111 000 00
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
. ......+...+..+.+++.+||..+|++||++.|++.
T Consensus 213 -----~----~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 213 -----Q----DDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -----c----cCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0 0112233344567899999999999999999999874
No 348
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.98 E-value=2.9e-31 Score=275.41 Aligned_cols=249 Identities=25% Similarity=0.365 Sum_probs=188.0
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhc---CCCCceeEeeEEEecCc----
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKI---NHSNIIRLSGFCVHEGN---- 428 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l---~H~niv~l~g~~~~~~~---- 428 (669)
++.|.| |.||+|..+ +..+|+|.++. .+.+|+.+++++ +|+|++++++++...+.
T Consensus 7 l~~g~~-------~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 7 IGEGAY-------GTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred ecccCc-------eEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 789999 999999984 78999999862 245688777766 59999999999988776
Q ss_pred -eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 429 -TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 429 -~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
.+++|||+. ++|.+++.... ...+++.+++.++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~---~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCP---KPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccC
Confidence 899999997 48999987642 235899999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
++........ .....++..|+|||.+.+..++.++|+||||+++|||++|+.||.+....+ . ...+..
T Consensus 153 ~~~~~~~~~~---------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~--~-~~~~~~ 220 (287)
T cd07838 153 LARIYSFEMA---------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD--Q-LDKIFD 220 (287)
T ss_pred cceeccCCcc---------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH--H-HHHHHH
Confidence 9987643321 122346888999999999999999999999999999999998887654321 1 111111
Q ss_pred HHhhhhHHhhh------hcccCCccC---CCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 588 VLEESNVREKL------RGFIDPSLR---NEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 588 ~~~~~~~~~~l------~~~~d~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
........... ......... .....+....+.+++.+||+.||.+||++.|++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 221 VIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred HcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 11100000000 000000000 0111234567889999999999999999999985
No 349
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-33 Score=316.51 Aligned_cols=239 Identities=28% Similarity=0.409 Sum_probs=194.5
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
.+|.|.| |.||-+.. +|+-.|+|-++- .+.+|..+|..|+|||+|+.+|+-.+.+..++.||
T Consensus 1242 ~Ig~G~f-------G~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1242 FIGGGTF-------GKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred ccCCcce-------eeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 4677777 99999987 577888887752 46789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++|+|.+.+...+ .+++.....+..|++.|+.|||+++ ||||||||.|||++.+|.+|++|||.|+.+..
T Consensus 1315 yC~~GsLa~ll~~gr-----i~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGR-----IEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HhccCcHHHHHHhcc-----hhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecC
Confidence 999999999997653 3555556668899999999999999 99999999999999999999999999998866
Q ss_pred CccccCCcccceeeecccccccccccccccCC---CCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV---ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... ..-..+..||+.|||||++.+.. -.-++||||+|||+.||+||+.||..-++. + +.+-.+.
T Consensus 1387 ~~~~~----~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne---~--aIMy~V~-- 1455 (1509)
T KOG4645|consen 1387 NAQTM----PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE---W--AIMYHVA-- 1455 (1509)
T ss_pred chhcC----CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch---h--HHHhHHh--
Confidence 53111 12245789999999999997643 456899999999999999999999854331 1 1111111
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+-.++.|..+..+-.+++.+||+.||.+|.++.|+++.
T Consensus 1456 ------------~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1456 ------------AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred ------------ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 112356777888889999999999999999998877754
No 350
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=2.1e-31 Score=270.64 Aligned_cols=228 Identities=30% Similarity=0.429 Sum_probs=189.0
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|.|+| |.||++... ++.+++|.++. .+..|++++++++|+||+++++.+..++..++|||
T Consensus 1 lg~G~~-------~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 73 (250)
T cd05123 1 LGKGSF-------GKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLE 73 (250)
T ss_pred CCCCCc-------eEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEe
Confidence 478899 999999984 78899998753 36679999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 74 ~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~ 145 (250)
T cd05123 74 YAPGGELFSHLSKE-----GRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSS 145 (250)
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence 99999999999754 35899999999999999999999998 99999999999999999999999999987644
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. .......++..|++||.+.+...+.++|+||||+++|||++|+.||....... ....
T Consensus 146 ~~--------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~~~---------- 204 (250)
T cd05123 146 EG--------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---IYEK---------- 204 (250)
T ss_pred CC--------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---HHHH----------
Confidence 31 11233567889999999998889999999999999999999999997543210 0000
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISE 638 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 638 (669)
+.. .....+...+..+.+++.+||..||.+||++.+
T Consensus 205 ------~~~--~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 205 ------ILK--DPLRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred ------Hhc--CCCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 011 112334444677899999999999999999954
No 351
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=6.1e-32 Score=288.22 Aligned_cols=238 Identities=27% Similarity=0.476 Sum_probs=198.3
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
.|.+.. .+|.|+| +.|..|.. .+..||+|.+.+ .+.+|+++|+.++|||||+++.+.....
T Consensus 57 ~y~i~~-tig~g~f-------~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~ 128 (596)
T KOG0586|consen 57 LYVIIK-TIGKGNF-------AKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA 128 (596)
T ss_pred ceeeee-eecccee-------EEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc
Confidence 455544 5999999 99999987 589999999854 2568999999999999999999999999
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
.+|+||||+.+|.+.+||.++ +.+.......++.|+..|++|||+++ |||||||++||||+.+.++||+|||
T Consensus 129 ~lylV~eya~~ge~~~yl~~~-----gr~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfg 200 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKH-----GRMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFG 200 (596)
T ss_pred eeEEEEEeccCchhHHHHHhc-----ccchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccc
Confidence 999999999999999999876 34666788899999999999999999 9999999999999999999999999
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVI-TPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
++..+.... +.....|++-|.|||++.+..+ .+++|+||+|+++|-|+.|..||++..-.+
T Consensus 201 fS~~~~~~~---------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--------- 262 (596)
T KOG0586|consen 201 FSTFFDYGL---------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--------- 262 (596)
T ss_pred cceeecccc---------cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc---------
Confidence 999876533 3456789999999999998766 689999999999999999999998754211
Q ss_pred HHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 587 RVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 587 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+. ...+-..++- |.-...+..++++++|-.+|.+|++++++.+.
T Consensus 263 --Lr--------~rvl~gk~rI--p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 263 --LR--------PRVLRGKYRI--PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred --cc--------chheeeeecc--cceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 00 0111112222 22333456899999999999999999999876
No 352
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=4e-31 Score=277.79 Aligned_cols=265 Identities=26% Similarity=0.371 Sum_probs=190.4
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
..|++.+. +|.|.| |.||+|..+ ++.+++|.+.. .+.+|++++++++|+||+++++++...
T Consensus 8 ~~y~~~~~-lg~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (311)
T cd07866 8 RDYEILGK-LGEGTF-------GEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVER 79 (311)
T ss_pred ccEEEEEE-eccCCC-------EEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecc
Confidence 34555443 899999 999999984 78899998742 356799999999999999999987644
Q ss_pred C--------ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC
Q 005923 427 G--------NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498 (669)
Q Consensus 427 ~--------~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~ 498 (669)
. ..++||||+.+ +|.+++... ...+++.++..++.|+++||+|||+.+ ++|+||||+||+++++
T Consensus 80 ~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~----~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~ 151 (311)
T cd07866 80 PDKSKRKRGSVYMVTPYMDH-DLSGLLENP----SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQ 151 (311)
T ss_pred cccccccCceEEEEEecCCc-CHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCC
Confidence 3 46999999975 788887643 246999999999999999999999999 9999999999999999
Q ss_pred CcEEEcccCCccccCCCccccCCc---ccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCc
Q 005923 499 LRAKITNFGLARSAESDEHEQGGY---GLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQ 574 (669)
Q Consensus 499 ~~~kl~DfGla~~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~ 574 (669)
+.+||+|||+++............ .........++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+..
T Consensus 152 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~ 231 (311)
T cd07866 152 GILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKS 231 (311)
T ss_pred CCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999998654332111000 0112234567888999998865 457899999999999999999999997654
Q ss_pred hhHHHHHHHHHHHHHhhhh-----HHhhhhcccCCccCCCCc-------HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 575 NCEAELLYASISRVLEESN-----VREKLRGFIDPSLRNEYP-------LDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~d~~l~~~~~-------~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
..... +.+........ ....+....+.......+ ......+.+++.+||+.||.+|||+.|++.
T Consensus 232 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 232 DIDQL---HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHH---HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 32211 11111111000 000111111100000111 122256889999999999999999999875
No 353
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=2.3e-31 Score=283.40 Aligned_cols=259 Identities=24% Similarity=0.391 Sum_probs=191.1
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEe---
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVH--- 425 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~--- 425 (669)
|++.+ .+|.|+| |.||+|.. .|..+|+|++.. .+.+|+.+|++++||||+++.+++..
T Consensus 7 y~~~~-~lg~g~~-------g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 78 (334)
T cd07855 7 YKPIE-NIGSGAY-------GVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGA 78 (334)
T ss_pred eeeee-eeecCCC-------eEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCC
Confidence 44444 3899999 99999987 488999998753 24579999999999999999998763
Q ss_pred -cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc
Q 005923 426 -EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504 (669)
Q Consensus 426 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 504 (669)
....++||||+. |+|.+++... ..+++..+..++.||+.||+|||+.+ ++||||||+||++++++.+||+
T Consensus 79 ~~~~~~lv~e~~~-~~l~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~ 149 (334)
T cd07855 79 DFKDVYVVMDLME-SDLHHIIHSD-----QPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIG 149 (334)
T ss_pred CCceEEEEEehhh-hhHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEec
Confidence 346799999996 6999998643 34899999999999999999999998 9999999999999999999999
Q ss_pred ccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 583 (669)
|||+++......... ........++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+...... ..
T Consensus 150 dfg~~~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~---~~ 222 (334)
T cd07855 150 DFGMARGLSSSPTEH----KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ---LK 222 (334)
T ss_pred ccccceeecccCcCC----CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH---HH
Confidence 999998654322110 111223468889999999865 5689999999999999999999999976543211 11
Q ss_pred HHHHHHhhhhH-------HhhhhcccCC-ccCCCC-----cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 584 SISRVLEESNV-------REKLRGFIDP-SLRNEY-----PLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 584 ~~~~~~~~~~~-------~~~l~~~~d~-~l~~~~-----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+......... .+.+....+. ...... ....+..+.+++.+||+.||.+||++++++..
T Consensus 223 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 223 LILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11111110000 0001111100 000111 12245678999999999999999999998875
No 354
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=1.3e-31 Score=276.71 Aligned_cols=240 Identities=27% Similarity=0.447 Sum_probs=194.2
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcC-CCCceeEeeEEEecCceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV 432 (669)
.+|.|+| |.||++.. ++..+++|+... .+..|.+++++++ |+||+++++++..++..++|
T Consensus 8 ~lg~g~~-------~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 8 IIGEGSF-------STVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred eecCCCc-------eEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 3899999 99999998 578999998853 3567899999998 99999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|||+++++|.+++.+. ..+++..+..|+.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++...
T Consensus 81 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~ 152 (280)
T cd05581 81 LEYAPNGELLQYIRKY-----GSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVL 152 (280)
T ss_pred EcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCcccccc
Confidence 9999999999999764 36999999999999999999999999 999999999999999999999999999876
Q ss_pred CCCccccC------------CcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHH
Q 005923 513 ESDEHEQG------------GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580 (669)
Q Consensus 513 ~~~~~~~~------------~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~ 580 (669)
........ ...........++..|+|||.+....++.++|+||||++++|+++|+.|+.......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--- 229 (280)
T cd05581 153 DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL--- 229 (280)
T ss_pred CCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH---
Confidence 54321100 000122234567899999999998889999999999999999999999998543211
Q ss_pred HHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCH----HHHHH
Q 005923 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI----SEVFV 641 (669)
Q Consensus 581 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~----~evl~ 641 (669)
...... ......+...+..+.+++.+||+.||.+||++ ++++.
T Consensus 230 ---~~~~~~---------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 230 ---TFQKIL---------------KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ---HHHHHH---------------hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 000010 01123344446678999999999999999999 77664
No 355
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=2.6e-31 Score=283.36 Aligned_cols=261 Identities=25% Similarity=0.406 Sum_probs=195.1
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec--
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE-- 426 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~-- 426 (669)
|+... .+|.|+| |.||++.. .+..||||.++. .+..|+.++++++|+||+++++++...
T Consensus 7 y~~~~-~lg~G~~-------~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~ 78 (337)
T cd07858 7 YVPIK-PIGRGAY-------GIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR 78 (337)
T ss_pred eeEEE-EeccCCC-------eEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccc
Confidence 44444 4899999 99999987 478899998753 245799999999999999999988644
Q ss_pred ---CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEE
Q 005923 427 ---GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKI 503 (669)
Q Consensus 427 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl 503 (669)
...++||||+. ++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||
T Consensus 79 ~~~~~~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL 149 (337)
T cd07858 79 EAFNDVYIVYELMD-TDLHQIIRSS-----QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKI 149 (337)
T ss_pred cccCcEEEEEeCCC-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEE
Confidence 34799999996 6899998653 45999999999999999999999998 999999999999999999999
Q ss_pred cccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHH
Q 005923 504 TNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582 (669)
Q Consensus 504 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~ 582 (669)
+|||+++...... .......++..|+|||.+.. ..++.++||||||+++|||++|+.||.+....+ ..
T Consensus 150 ~Dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~ 218 (337)
T cd07858 150 CDFGLARTTSEKG--------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH---QL 218 (337)
T ss_pred CcCccccccCCCc--------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH---HH
Confidence 9999998764321 11123457889999998865 568999999999999999999999997654221 11
Q ss_pred HHHHHHHhhhh-----------HHhhhhcc---cCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHh
Q 005923 583 ASISRVLEESN-----------VREKLRGF---IDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT--LSKI 646 (669)
Q Consensus 583 ~~~~~~~~~~~-----------~~~~l~~~---~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~~i 646 (669)
..+...+.... ....++.. .+.... ....++..++.+++++||+.||.+|||++|+++. |+.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 219 KLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred HHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 11111111100 00001000 001110 0112345678999999999999999999999988 7766
Q ss_pred hcC
Q 005923 647 WSS 649 (669)
Q Consensus 647 ~~~ 649 (669)
...
T Consensus 298 ~~~ 300 (337)
T cd07858 298 HDP 300 (337)
T ss_pred cCc
Confidence 544
No 356
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=2.8e-31 Score=268.61 Aligned_cols=215 Identities=20% Similarity=0.195 Sum_probs=175.5
Q ss_pred eEEEEEEE--CCCeeEEEEecc--cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCCCCCC
Q 005923 380 GSVYRGSF--KGDDAAVKVMKG--DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455 (669)
Q Consensus 380 G~Vy~g~~--~g~~vavK~~~~--~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~ 455 (669)
|.||++.. +++.+|+|.++. .+..|...+....|||++++++++.+++..++||||+++|+|.+++... ..
T Consensus 7 ~~v~~~~~~~~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~ 81 (237)
T cd05576 7 DKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF-----LN 81 (237)
T ss_pred ceEEEEEEccCCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh-----cC
Confidence 89999988 578899999975 3556666666778999999999999999999999999999999999754 34
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccc
Q 005923 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535 (669)
Q Consensus 456 l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~ 535 (669)
+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++++|||++....... ....++..
T Consensus 82 l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-----------~~~~~~~~ 147 (237)
T cd05576 82 IPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-----------DGEAVENM 147 (237)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhcccccc-----------ccCCcCcc
Confidence 899999999999999999999998 9999999999999999999999999887654321 11234667
Q ss_pred cccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHH
Q 005923 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLA 615 (669)
Q Consensus 536 y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~ 615 (669)
|+|||.+.+..++.++||||+|+++|||++|+.++...... .. .......|....
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------------~~----~~~~~~~~~~~~ 202 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------------------IN----THTTLNIPEWVS 202 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------------cc----cccccCCcccCC
Confidence 99999998888999999999999999999999876532110 00 000112233345
Q ss_pred HHHHHHHHHhcccCCCCCCCHHH
Q 005923 616 FSMAQLAKNCTAHDLNARPSISE 638 (669)
Q Consensus 616 ~~l~~li~~Cl~~dP~~RPt~~e 638 (669)
..+.+++.+||+.||.+||++.+
T Consensus 203 ~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 203 EEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred HHHHHHHHHHccCCHHHhcCCCc
Confidence 67899999999999999999743
No 357
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=4.4e-31 Score=273.50 Aligned_cols=249 Identities=29% Similarity=0.414 Sum_probs=191.9
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
.++.|.| |.||++.. +++.+++|.++. .+.+|++++++++|+||+++++++..++..++|||
T Consensus 6 ~i~~g~~-------~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 6 KIGEGTY-------GVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred eeecCCC-------ceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEe
Confidence 3788999 99999987 478899998753 35679999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+++ +|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||.+.....
T Consensus 79 ~~~~-~l~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~ 150 (283)
T cd05118 79 FMDT-DLYKLIKDR----QRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGS 150 (283)
T ss_pred ccCC-CHHHHHHhh----cccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCC
Confidence 9975 899988753 246899999999999999999999999 99999999999999999999999999987654
Q ss_pred CccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... ......++..|+|||.+.+. .++.++|+||||+++|+|++|+.+|......+. ...+...+....
T Consensus 151 ~~~--------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~ 219 (283)
T cd05118 151 PVR--------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ---LFKIFRTLGTPD 219 (283)
T ss_pred Ccc--------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCc
Confidence 321 11224577889999999876 789999999999999999999999876543221 111111111100
Q ss_pred HHhhhhcccC---------Cc----cCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 594 VREKLRGFID---------PS----LRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 594 ~~~~l~~~~d---------~~----l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.+....+.+ +. .......+...++.+++.+||+.||.+||++.|++.
T Consensus 220 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 220 -PEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred -hHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000001100 00 001112245678999999999999999999999985
No 358
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=2e-31 Score=283.19 Aligned_cols=260 Identities=27% Similarity=0.418 Sum_probs=196.9
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecC-----ce
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEG-----NT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~ 429 (669)
.+|.|.| |.||++... ++.+++|.+.. .+.+|+.++++++|+||+++.+++...+ ..
T Consensus 7 ~ig~g~~-------~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 7 PIGSGAY-------GVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred eecCCCC-------eEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 4899999 999999974 78899998753 3667999999999999999999998765 78
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
++||||++ ++|.+++.+. ..+++..+..++.|++.||+|||+.+ ++||||||+|||+++++.++|+|||++
T Consensus 80 ~lv~e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 80 YIVTELME-TDLHKVIKSP-----QPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred EEEecchh-hhHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCce
Confidence 99999998 4899998754 36999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
......... ........++..|+|||.+.+. .++.++|+||||+++|+|++|+.||.+....+. ...+...
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~---~~~i~~~ 222 (330)
T cd07834 151 RGVDPDEDE-----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ---LNLIVEV 222 (330)
T ss_pred Eeecccccc-----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH---HHHHHHh
Confidence 876543210 0112334678899999999887 889999999999999999999999986553221 1111111
Q ss_pred HhhhhHH-------hhhhcccC---CccC---CCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHhhcC
Q 005923 589 LEESNVR-------EKLRGFID---PSLR---NEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT--LSKIWSS 649 (669)
Q Consensus 589 ~~~~~~~-------~~l~~~~d---~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~~i~~~ 649 (669)
....... .....++. .... .......+..+.+++.+||+.||.+||++.+++.. ++++...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 223 LGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred cCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 1100000 00000000 0000 00112245678999999999999999999999985 6666544
No 359
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=3.8e-31 Score=273.79 Aligned_cols=249 Identities=26% Similarity=0.411 Sum_probs=190.7
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
.++.|.| |.||+|... ++.+++|.++. .+..|+.++++++|+|++++++++...+..++|||
T Consensus 6 ~ig~g~~-------~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 6 KLGEGTY-------GVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred cccccCc-------ceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEec
Confidence 4789999 999999984 78899998863 25679999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|++ ++|.+++.... ..+++..+.+++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||+++....
T Consensus 79 ~~~-~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~ 150 (282)
T cd07829 79 YCD-MDLKKYLDKRP----GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGI 150 (282)
T ss_pred CcC-cCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCC
Confidence 998 59999997642 35999999999999999999999999 99999999999999999999999999987644
Q ss_pred CccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||.+....+. ...+...+....
T Consensus 151 ~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 219 (282)
T cd07829 151 PLR--------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ---LFKIFQILGTPT 219 (282)
T ss_pred Ccc--------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHHHHhCCCc
Confidence 321 11223456789999998776 889999999999999999999999876543211 111111111100
Q ss_pred H--Hhhhhcc------c----CCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 594 V--REKLRGF------I----DPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 594 ~--~~~l~~~------~----d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
. ......+ . ........+ .....+.+++++||+.||.+||++.+++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 220 EESWPGVTKLPDYKPTFPKFPPKDLEKVLP-RLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHHhhcccccccccccccCccchHHhcc-cccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0 0000000 0 000001111 22557899999999999999999999975
No 360
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-32 Score=278.07 Aligned_cols=233 Identities=24% Similarity=0.318 Sum_probs=194.3
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 433 (669)
.+|.|+| |.||-... .|+-+|.|.+.. -...|-.+|++++.+.||.|--.+..++.++||+
T Consensus 192 vlGkGGF-------GEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 192 VLGKGGF-------GEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred EEecccc-------cceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 3899999 88887766 578888887632 2457999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
..|.||+|.-+|.+. ....+++..++-++.+|+.||++||..+ ||+||+||+|||+|+.|+++|+|+|||..+.
T Consensus 265 tlMNGGDLkfHiyn~---g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNH---GNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EeecCCceeEEeecc---CCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecC
Confidence 999999999999765 2357999999999999999999999999 9999999999999999999999999999886
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
... ..+..+||.+|||||++.++.|+...|.||+||++|||+.|+.||...... ...
T Consensus 339 ~g~---------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK---vk~----------- 395 (591)
T KOG0986|consen 339 EGK---------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK---VKR----------- 395 (591)
T ss_pred CCC---------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh---hhH-----------
Confidence 543 344569999999999999999999999999999999999999999753321 111
Q ss_pred HHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHH
Q 005923 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637 (669)
Q Consensus 594 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 637 (669)
+.++..+- .-..++++.+..+..++.+..|++||.+|...+
T Consensus 396 --eEvdrr~~-~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 396 --EEVDRRTL-EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred --HHHHHHHh-cchhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 11111110 012467788888999999999999999998554
No 361
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=2.3e-30 Score=275.10 Aligned_cols=252 Identities=27% Similarity=0.388 Sum_probs=188.2
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEe-c
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVH-E 426 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~-~ 426 (669)
.|.+.. .++.|+| |.||++.. .++.+|+|.+.. .+..|++++++++||||+++.+++.. +
T Consensus 11 ~y~~~~-~ig~g~~-------g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 82 (328)
T cd07856 11 RYVDLQ-PVGMGAF-------GLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL 82 (328)
T ss_pred ceEEEE-eecccCC-------eEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC
Confidence 344444 4899999 99999986 477899997632 46679999999999999999999875 4
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
...++|+||+ +++|.++++.. .+++..+..++.|++.||+|||+.+ ++||||+|+|||+++++.+||+||
T Consensus 83 ~~~~lv~e~~-~~~L~~~~~~~------~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~df 152 (328)
T cd07856 83 EDIYFVTELL-GTDLHRLLTSR------PLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDF 152 (328)
T ss_pred CcEEEEeehh-ccCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCcc
Confidence 5789999998 56999888643 4788889999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 585 (669)
|+++...... ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+..... ....+
T Consensus 153 g~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~---~~~~~ 218 (328)
T cd07856 153 GLARIQDPQM-----------TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN---QFSII 218 (328)
T ss_pred ccccccCCCc-----------CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHH
Confidence 9987543211 12356788999999866 568999999999999999999999997654311 11111
Q ss_pred HHHHhhhhH--------HhhhhcccCCccCCCCc-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 586 SRVLEESNV--------REKLRGFIDPSLRNEYP-----LDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 586 ~~~~~~~~~--------~~~l~~~~d~~l~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
...+..... ...++-+..-......+ ..++..+.+++.+||+.+|.+||++.|++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 219 TDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 111111000 00000000000111111 1234678999999999999999999999877
No 362
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.1e-32 Score=265.06 Aligned_cols=252 Identities=26% Similarity=0.380 Sum_probs=205.5
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecccH----------HHHHHHHHhcCCCCceeEeeEEEe
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV----------SSEINILKKINHSNIIRLSGFCVH 425 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~~----------~~E~~~l~~l~H~niv~l~g~~~~ 425 (669)
..|.|-.+ +|.|.| |+|-..+- .|+.+|+|+++.++ ..|-++|+..+||.+..|--.|..
T Consensus 168 ~dFdfLKv-LGkGTF-------GKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt 239 (516)
T KOG0690|consen 168 EDFDFLKV-LGKGTF-------GKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT 239 (516)
T ss_pred chhhHHHH-hcCCcc-------ceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc
Confidence 34555554 899999 99988876 48889999998653 357889999999999999989999
Q ss_pred cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcc
Q 005923 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 505 (669)
.+.+|+||||+.||.|.-+|.+. +.+++.....+..+|..||.|||+.+ ||.||||.+|.|+|.||++||+|
T Consensus 240 ~drlCFVMeyanGGeLf~HLsre-----r~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitD 311 (516)
T KOG0690|consen 240 QDRLCFVMEYANGGELFFHLSRE-----RVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITD 311 (516)
T ss_pred CceEEEEEEEccCceEeeehhhh-----hcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeee
Confidence 99999999999999999999765 45888888889999999999999999 99999999999999999999999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 585 (669)
||+++.--.. ...+...+||+.|+|||++....|....|.|.+|||||||++|+.||...+.. .+++.+
T Consensus 312 FGLCKE~I~~--------g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~---kLFeLI 380 (516)
T KOG0690|consen 312 FGLCKEEIKY--------GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE---KLFELI 380 (516)
T ss_pred cccchhcccc--------cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh---HHHHHH
Confidence 9999864332 23567789999999999999999999999999999999999999999865432 122111
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC--HHHHHHHHHHhhcCCCCCC
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS--ISEVFVTLSKIWSSSSDWD 654 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt--~~evl~~L~~i~~~~~~~~ 654 (669)
+- + .-.+|..+..+...|+...|.+||.+|.. .+++.+....=.-.+.+|+
T Consensus 381 ---l~-----e----------d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~ 433 (516)
T KOG0690|consen 381 ---LM-----E----------DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWE 433 (516)
T ss_pred ---Hh-----h----------hccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHH
Confidence 00 0 12467777788999999999999999963 3455554444455566665
No 363
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=289.02 Aligned_cols=263 Identities=28% Similarity=0.402 Sum_probs=196.2
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecC------ce
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEG------NT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~ 429 (669)
.+|+|+| |.||+|+. .|+.||||.++. ..-+|+++|++++|+|||+++++-.... ..
T Consensus 20 ~LG~Ga~-------g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 20 RLGKGAF-------GNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred hhcCCcc-------ceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 4999999 99999997 499999999865 2457999999999999999999865433 46
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeec--CCC--cEEEcc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLD--TNL--RAKITN 505 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~--~~~--~~kl~D 505 (669)
.+||||+.+|||...|.+- .+...|++.+.+.++.++..||.|||+++ |+||||||.||++- +++ .-||+|
T Consensus 93 vlvmEyC~gGsL~~~L~~P--EN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSP--ENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred eEEEeecCCCcHHHHhcCc--ccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeec
Confidence 8999999999999999865 46677999999999999999999999999 99999999999983 333 469999
Q ss_pred cCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchh--HHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNC--EAELLY 582 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~--~~~~~~ 582 (669)
||.||.+..+. ......||..|++||.++. ..|+..+|.|||||++||..||..||-..... ..+..+
T Consensus 168 fG~Arel~d~s---------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~ 238 (732)
T KOG4250|consen 168 FGAARELDDNS---------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMW 238 (732)
T ss_pred ccccccCCCCC---------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhh
Confidence 99999887643 4677899999999999995 88999999999999999999999999732211 111111
Q ss_pred HHHHHHHhhhh--HHhhhhcccCCccCCCCcH----HHHHHHHHHHHHhcccCCCCCC--CHHHHHHHHHHhhcC
Q 005923 583 ASISRVLEESN--VREKLRGFIDPSLRNEYPL----DLAFSMAQLAKNCTAHDLNARP--SISEVFVTLSKIWSS 649 (669)
Q Consensus 583 ~~~~~~~~~~~--~~~~l~~~~d~~l~~~~~~----~~~~~l~~li~~Cl~~dP~~RP--t~~evl~~L~~i~~~ 649 (669)
..+.+-..... ..+...+-++-....++|. .....+-..+..+|..+|++|- ...+....+..|...
T Consensus 239 ~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 239 HIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred hhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 11110000000 0000011111111122232 3334456777788889999998 888888777777643
No 364
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=1.8e-30 Score=276.34 Aligned_cols=252 Identities=24% Similarity=0.362 Sum_probs=184.8
Q ss_pred HHhCCCCcccceeeEEEEEEEC----CCeeEEEEecc---------cHHHHHHHHHhc-CCCCceeEeeEEEec----Cc
Q 005923 367 IATGSFSEENRIQGSVYRGSFK----GDDAAVKVMKG---------DVSSEINILKKI-NHSNIIRLSGFCVHE----GN 428 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~----g~~vavK~~~~---------~~~~E~~~l~~l-~H~niv~l~g~~~~~----~~ 428 (669)
+|.|.| |.||++... +..+|+|.++. .+.+|+++++++ +||||+++++++... ..
T Consensus 8 lg~G~~-------g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 8 LGQGAY-------GIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred ccccCC-------eEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 789999 999999984 55899998753 356799999999 599999999976533 34
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGl 508 (669)
.++++||+. ++|.+++... ..+++..+..++.||+.||+|||+.+ ++||||||+|||+++++.+||+|||+
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~ 151 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG-----QPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGL 151 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCC
Confidence 688889886 6999998653 45899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 587 (669)
++......... ........|+..|+|||.+.+ ..++.++|+||||+++|||++|+.||.+....+ ....+..
T Consensus 152 a~~~~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~---~~~~~~~ 224 (332)
T cd07857 152 ARGFSENPGEN----AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD---QLNQILQ 224 (332)
T ss_pred ceecccccccc----cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH---HHHHHHH
Confidence 98764322110 011223568899999998765 568999999999999999999999987644321 1111111
Q ss_pred HHhhhhHHhhhhcccCC-----------ccCCC---CcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 588 VLEESNVREKLRGFIDP-----------SLRNE---YPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 588 ~~~~~~~~~~l~~~~d~-----------~l~~~---~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.+.... .+.+..+.++ .-... ........+.+++.+||+.||.+|||+.|++..
T Consensus 225 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 225 VLGTPD-EETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HhCCCC-HHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111000 0000000000 00000 001124578999999999999999999999754
No 365
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=1e-30 Score=279.47 Aligned_cols=257 Identities=23% Similarity=0.403 Sum_probs=189.1
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
.|...+ .+|.|+| |.||+|.. .|+.+|+|.++. .+.+|+.++++++|+||+++++++....
T Consensus 16 ~y~~~~-~ig~g~~-------g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 87 (342)
T cd07879 16 RYTSLK-QVGSGAY-------GSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAV 87 (342)
T ss_pred ceEEEE-EeeecCC-------eEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccc
Confidence 344333 4899999 99999987 478999998853 2568999999999999999999987543
Q ss_pred ------ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcE
Q 005923 428 ------NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA 501 (669)
Q Consensus 428 ------~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~ 501 (669)
..++|+||+.. +|.+++. ..+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.+
T Consensus 88 ~~~~~~~~~lv~e~~~~-~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~ 156 (342)
T cd07879 88 SGDEFQDFYLVMPYMQT-DLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCEL 156 (342)
T ss_pred cCCCCceEEEEeccccc-CHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCE
Confidence 45999999974 7877653 24899999999999999999999999 9999999999999999999
Q ss_pred EEcccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHH
Q 005923 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580 (669)
Q Consensus 502 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~ 580 (669)
||+|||+++...... ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+......
T Consensus 157 kL~dfg~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~-- 223 (342)
T cd07879 157 KILDFGLARHADAEM-----------TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-- 223 (342)
T ss_pred EEeeCCCCcCCCCCC-----------CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH--
Confidence 999999998653211 12356788999999876 5689999999999999999999999986542111
Q ss_pred HHHHHHHHHhhh--hHHhh---------hhc---ccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HH
Q 005923 581 LYASISRVLEES--NVREK---------LRG---FIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT--LS 644 (669)
Q Consensus 581 ~~~~~~~~~~~~--~~~~~---------l~~---~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~ 644 (669)
...+....... ...+. ... .....+...++ .....+.+++.+||+.||.+||++.|++.+ ++
T Consensus 224 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~ 301 (342)
T cd07879 224 -LTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFP-KASPQAVDLLEKMLELDVDKRLTATEALEHPYFD 301 (342)
T ss_pred -HHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhc-CCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchh
Confidence 11111111000 00000 000 00000000001 234568899999999999999999999965 77
Q ss_pred HhhcC
Q 005923 645 KIWSS 649 (669)
Q Consensus 645 ~i~~~ 649 (669)
.+...
T Consensus 302 ~~~~~ 306 (342)
T cd07879 302 SFRDA 306 (342)
T ss_pred hcccc
Confidence 66543
No 366
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=1.6e-30 Score=300.18 Aligned_cols=136 Identities=32% Similarity=0.463 Sum_probs=122.8
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEec
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHE 426 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~ 426 (669)
.|.+.+ ++|.|.| |.||+|... ++.||+|+++. .+..|+.+++.++|+||+++++++...
T Consensus 5 ~y~i~~-~LG~G~f-------g~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~ 76 (669)
T cd05610 5 EFVIVK-PISRGAF-------GKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSA 76 (669)
T ss_pred CEEEEE-EEecCCC-------eEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC
Confidence 455444 4899999 999999986 88999999863 366799999999999999999999999
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
+..+|||||+.+++|.++++.. +.+++..++.|+.||+.||+|||+++ |+||||||+|||++.++.+||+||
T Consensus 77 ~~~~lVmEy~~g~~L~~li~~~-----~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DF 148 (669)
T cd05610 77 NNVYLVMEYLIGGDVKSLLHIY-----GYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDF 148 (669)
T ss_pred CEEEEEEeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeC
Confidence 9999999999999999999754 35889999999999999999999998 999999999999999999999999
Q ss_pred CCcc
Q 005923 507 GLAR 510 (669)
Q Consensus 507 Gla~ 510 (669)
|+++
T Consensus 149 Gls~ 152 (669)
T cd05610 149 GLSK 152 (669)
T ss_pred CCCc
Confidence 9987
No 367
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=1.2e-30 Score=294.94 Aligned_cols=246 Identities=27% Similarity=0.446 Sum_probs=180.4
Q ss_pred chhHHH-HHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc--------HHHHHHHHHhcCCCCceeEeeEEEec---
Q 005923 361 KFQDLK-IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD--------VSSEINILKKINHSNIIRLSGFCVHE--- 426 (669)
Q Consensus 361 ~~~~l~-~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~--------~~~E~~~l~~l~H~niv~l~g~~~~~--- 426 (669)
.|+|++ +|.|+| |.||+++. +|..+|||++.-. +.+|+.+|.+|+|||||+++..+.+.
T Consensus 480 DFEEL~lLGkGGF-------G~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 480 DFEELELLGKGGF-------GSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hhHHHHHhcCCCC-------ceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 466765 699999 99999986 7999999998644 67899999999999999987543210
Q ss_pred --------------------------------------------------------------------------------
Q 005923 427 -------------------------------------------------------------------------------- 426 (669)
Q Consensus 427 -------------------------------------------------------------------------------- 426 (669)
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence
Q ss_pred ------------------------------------CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHH
Q 005923 427 ------------------------------------GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470 (669)
Q Consensus 427 ------------------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~ 470 (669)
-.+|+=||||+.-.|.++++++.... .-...++++++|++
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~----~~d~~wrLFreIlE 708 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS----QRDEAWRLFREILE 708 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch----hhHHHHHHHHHHHH
Confidence 01366788888877777776553110 35667899999999
Q ss_pred HHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC----C------CccccCCcccceeeeccccccccccc
Q 005923 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE----S------DEHEQGGYGLQLTRHVVGTYGYMAPE 540 (669)
Q Consensus 471 ~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~----~------~~~~~~~~~~~~~~~~~gt~~y~aPE 540 (669)
||.|+|+.+ +|||||||.|||+|++..+||+|||+|.... . ......+......+..+||.-|+|||
T Consensus 709 GLaYIH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPE 785 (1351)
T KOG1035|consen 709 GLAYIHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPE 785 (1351)
T ss_pred HHHHHHhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHH
Confidence 999999999 9999999999999999999999999998721 0 01111111122345578999999999
Q ss_pred ccccCC---CCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCC--CCcHHHH
Q 005923 541 YIENGV---ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN--EYPLDLA 615 (669)
Q Consensus 541 ~l~~~~---~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~--~~~~~~~ 615 (669)
.+.+.. |+.|+|+||+|||++||+. ||..... ...+ ...++ +..+.. .+..+..
T Consensus 786 ll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME------Ra~i---------L~~LR---~g~iP~~~~f~~~~~ 844 (1351)
T KOG1035|consen 786 LLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME------RASI---------LTNLR---KGSIPEPADFFDPEH 844 (1351)
T ss_pred HhcccccccccchhhhHHHHHHHHHHhc---cCCchHH------HHHH---------HHhcc---cCCCCCCcccccccc
Confidence 997754 9999999999999999985 3543211 0111 11122 222211 1223333
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 616 FSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 616 ~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
..-+++|++++++||.+|||+.|++.
T Consensus 845 ~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 845 PEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred hHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 44579999999999999999999874
No 368
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=4.5e-30 Score=274.55 Aligned_cols=256 Identities=22% Similarity=0.390 Sum_probs=189.9
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecC-
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEG- 427 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~- 427 (669)
|+..+ .+|.|.| |.||++.. .+..||||.++. .+.+|++++++++|+||+++++++..+.
T Consensus 17 y~~~~-~lg~G~~-------g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 17 YRDLK-QVGSGAY-------GTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS 88 (343)
T ss_pred eEEEE-EeeecCC-------eEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc
Confidence 44333 3899999 99999987 478899998742 3567999999999999999999987553
Q ss_pred -----ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEE
Q 005923 428 -----NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAK 502 (669)
Q Consensus 428 -----~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~k 502 (669)
..++||||+ +++|.+++.. ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+|
T Consensus 89 ~~~~~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~k 158 (343)
T cd07880 89 LDRFHDFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELK 158 (343)
T ss_pred ccccceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEE
Confidence 358999999 6799988864 24899999999999999999999999 99999999999999999999
Q ss_pred EcccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHH
Q 005923 503 ITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELL 581 (669)
Q Consensus 503 l~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~ 581 (669)
|+|||+++...... ....++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||.+.......
T Consensus 159 l~dfg~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~-- 225 (343)
T cd07880 159 ILDFGLARQTDSEM-----------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQL-- 225 (343)
T ss_pred EeecccccccccCc-----------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--
Confidence 99999998654321 12356888999999876 46889999999999999999999999865432111
Q ss_pred HHHHHHHH-----------hhhhHHhhhh---cccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHHH
Q 005923 582 YASISRVL-----------EESNVREKLR---GFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV--TLSK 645 (669)
Q Consensus 582 ~~~~~~~~-----------~~~~~~~~l~---~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~--~L~~ 645 (669)
..+.... ........+. .+....+ ......+...+.+++.+|++.||.+|||+.+++. .++.
T Consensus 226 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~ 303 (343)
T cd07880 226 -MEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE 303 (343)
T ss_pred -HHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence 1111100 0000000000 0000000 0011233456889999999999999999999994 4555
Q ss_pred hhc
Q 005923 646 IWS 648 (669)
Q Consensus 646 i~~ 648 (669)
...
T Consensus 304 ~~~ 306 (343)
T cd07880 304 FHD 306 (343)
T ss_pred hcC
Confidence 543
No 369
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=2.4e-30 Score=276.60 Aligned_cols=258 Identities=21% Similarity=0.336 Sum_probs=184.5
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcCCCCceeEeeEEEec----
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHE---- 426 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~H~niv~l~g~~~~~---- 426 (669)
|.+.+ .+|.|+| |.||+|.. .|..|++|.+.. .+.+|++++++++||||+++++++...
T Consensus 7 y~~~~-~Lg~g~~-------g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (342)
T cd07854 7 YMDLR-PLGCGSN-------GLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDL 78 (342)
T ss_pred eEEEE-EecCCCC-------EEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccc
Confidence 44433 3899999 99999987 478899998743 367899999999999999999876543
Q ss_pred ----------CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeec
Q 005923 427 ----------GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLD 496 (669)
Q Consensus 427 ----------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~ 496 (669)
...++||||++ ++|.+++... .+++..++.++.||+.||+|||+.+ ++||||||+||+++
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~ 148 (342)
T cd07854 79 TEDVGSLTELNSVYIVQEYME-TDLANVLEQG------PLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFIN 148 (342)
T ss_pred ccccccccccceEEEEeeccc-ccHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEc
Confidence 35789999997 5999888643 4889999999999999999999999 99999999999997
Q ss_pred -CCCcEEEcccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCc
Q 005923 497 -TNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQ 574 (669)
Q Consensus 497 -~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~ 574 (669)
+++.+|++|||+++......... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||.+..
T Consensus 149 ~~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~ 223 (342)
T cd07854 149 TEDLVLKIGDFGLARIVDPHYSHK-----GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAH 223 (342)
T ss_pred CCCceEEECCcccceecCCccccc-----cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 45678999999998654321110 01122357888999998754 568889999999999999999999998654
Q ss_pred hhHHHHHHHHHHHH-Hhhh-hHHh---hhhcccC-CccCCC-----CcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 575 NCEAELLYASISRV-LEES-NVRE---KLRGFID-PSLRNE-----YPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 575 ~~~~~~~~~~~~~~-~~~~-~~~~---~l~~~~d-~~l~~~-----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
..+.... ..... .... .... .+...+. ...... .......++.+++.+||+.||.+|||+.|++..
T Consensus 224 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 224 ELEQMQL--ILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HHHHHHH--HHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 3221110 00000 0000 0000 0000000 000000 011234568899999999999999999999854
No 370
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.8e-31 Score=260.40 Aligned_cols=262 Identities=24% Similarity=0.396 Sum_probs=196.7
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-------cHHHHHHHHHhcC-CCCceeEeeEEEecC
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-------DVSSEINILKKIN-HSNIIRLSGFCVHEG 427 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-------~~~~E~~~l~~l~-H~niv~l~g~~~~~~ 427 (669)
..|++.+-.+|+|.| +.|--.+. .|.++|||++.+ .+.+|++++.+.+ |+||++|+.+|+++.
T Consensus 77 d~YkLt~e~LGeGAy-------asVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 77 DMYKLTSELLGEGAY-------ASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHHHhHHHHhcCccc-------eeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 457777777999999 77776553 789999999853 5778999999985 999999999999999
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC---cEEEc
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL---RAKIT 504 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~---~~kl~ 504 (669)
..|||||-|.||+|..+++++ ..+++....++..+|+.||.|||.++ |.|||+||+|||..+-. -+||+
T Consensus 150 ~FYLVfEKm~GGplLshI~~~-----~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiC 221 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKR-----KHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKIC 221 (463)
T ss_pred eEEEEEecccCchHHHHHHHh-----hhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeee
Confidence 999999999999999999876 45899999999999999999999999 99999999999996543 48999
Q ss_pred ccCCccccCCCccccCCcccceeeecccccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE-----NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~ 579 (669)
||.|..-......-.... ..-....+|...|||||+.. ...|..+.|.||+|||||-|++|-.||.|.-+.+-.
T Consensus 222 DfDLgSg~k~~~~~spas-tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG 300 (463)
T KOG0607|consen 222 DFDLGSGIKLNNDCSPAS-TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG 300 (463)
T ss_pred ccccccccccCCCCCCCC-CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC
Confidence 999987543322211111 11123468899999999874 356888999999999999999999999864332111
Q ss_pred HHHHHHHHHHhhhhHHhhhhcccCCccCCCCcH----HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPL----DLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~----~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
|-.....+.-++. ..+.+ -+. .-++|+ ....+..+++...+..|+.+|.++..++.
T Consensus 301 WdrGe~Cr~CQ~~-LFesI---QEG--kYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 301 WDRGEVCRVCQNK-LFESI---QEG--KYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ccCCCccHHHHHH-HHHHH---hcc--CCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 1111111111110 00111 111 123443 34456789999999999999999998886
No 371
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=9.9e-31 Score=252.68 Aligned_cols=236 Identities=22% Similarity=0.447 Sum_probs=186.3
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc--------HHHHHHHHHhcC-CCCceeEeeEEEecCceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD--------VSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~--------~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
+|.|.- |.|++.++. |...|||.|+.. +...++++.+-+ .|.||+.+|||..+...++.||.
T Consensus 100 lGsGtc-------G~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 100 LGSGTC-------GQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred hcCCCc-------cceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 788888 999999995 588899999642 334455554444 79999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
|.. .+..+|++-+ +++++.-+-++...+..||.||.+++ .|+|||+||+|||+|+.|++|+||||++..+-..
T Consensus 173 Ms~-C~ekLlkrik----~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS 245 (391)
T KOG0983|consen 173 MST-CAEKLLKRIK----GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS 245 (391)
T ss_pred HHH-HHHHHHHHhc----CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecc
Confidence 964 7777776542 56888888999999999999998764 3999999999999999999999999999876543
Q ss_pred ccccCCcccceeeecccccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhh
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIE---NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEES 592 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (669)
. ......|-+.|||||.+. ...|.-++||||||+.++||.||+.||.+-+.+ ++.+..++.+.
T Consensus 246 k---------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-----Fe~ltkvln~e 311 (391)
T KOG0983|consen 246 K---------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-----FEVLTKVLNEE 311 (391)
T ss_pred c---------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-----HHHHHHHHhcC
Confidence 2 123356888999999995 457888999999999999999999999864321 12223333221
Q ss_pred hHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 593 NVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 593 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.|.+.+ ...+...+.+++..||++|+.+||...+++++
T Consensus 312 ----------PP~L~~--~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 312 ----------PPLLPG--HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred ----------CCCCCc--ccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 133322 22366778999999999999999999998875
No 372
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=6.4e-30 Score=273.60 Aligned_cols=251 Identities=24% Similarity=0.384 Sum_probs=185.7
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec-
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE- 426 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~- 426 (669)
.|.+.+ .+|.|+| |.||++.. +++.||+|+++. .+.+|+.++++++|+||+++.+++...
T Consensus 18 ~y~~~~-~lg~G~~-------g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 18 RYQNLS-PVGSGAY-------GSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred ceEEEE-EeeecCC-------eEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 344444 3899999 99999986 478899998853 245699999999999999999988643
Q ss_pred -----CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcE
Q 005923 427 -----GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA 501 (669)
Q Consensus 427 -----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~ 501 (669)
...+++++++ +++|.+++... .+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCE
Confidence 3467888876 78999888643 4899999999999999999999999 9999999999999999999
Q ss_pred EEcccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHH
Q 005923 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580 (669)
Q Consensus 502 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~ 580 (669)
||+|||+++...... ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||........
T Consensus 160 kl~dfg~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-- 226 (345)
T cd07877 160 KILDFGLARHTDDEM-----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-- 226 (345)
T ss_pred EEecccccccccccc-----------cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--
Confidence 999999988653221 22457889999999876 5688999999999999999999999975433211
Q ss_pred HHHHHHHHHh-----------hhhHHhh---hhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 581 LYASISRVLE-----------ESNVREK---LRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 581 ~~~~~~~~~~-----------~~~~~~~---l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
...+..... ....... +.......+. ........++.+++.+|++.||.+||++.|++.+
T Consensus 227 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 227 -LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred -HHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchh-hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 111111100 0000000 0000000000 0011234568899999999999999999999876
No 373
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.9e-30 Score=277.40 Aligned_cols=252 Identities=23% Similarity=0.404 Sum_probs=188.3
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecC
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
.|.+.. .+|.|.| |.||+|... +..+|+|+++. .+.+|+.++++++|+|++++.+++..++
T Consensus 16 ~y~~~~-~ig~g~~-------g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07851 16 RYQNLS-PVGSGAY-------GQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS 87 (343)
T ss_pred ceEEEE-EeccCCc-------eEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc
Confidence 344433 3899999 999999984 67899998753 2456999999999999999999887655
Q ss_pred c------eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcE
Q 005923 428 N------TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA 501 (669)
Q Consensus 428 ~------~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~ 501 (669)
. .++|+||+ +++|.+++.. ..+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+
T Consensus 88 ~~~~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~ 157 (343)
T cd07851 88 SLEDFQDVYLVTHLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCEL 157 (343)
T ss_pred cccccccEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCE
Confidence 4 89999998 5699999864 35899999999999999999999999 9999999999999999999
Q ss_pred EEcccCCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHH
Q 005923 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580 (669)
Q Consensus 502 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~ 580 (669)
||+|||++...... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+....+.
T Consensus 158 kL~dfg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~-- 224 (343)
T cd07851 158 KILDFGLARHTDDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQ-- 224 (343)
T ss_pred EEcccccccccccc-----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--
Confidence 99999999865432 122356788999999865 4678999999999999999999999986543211
Q ss_pred HHHHHHHHHhhhh-------HHhhhhcccCC---ccCCCC---cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 581 LYASISRVLEESN-------VREKLRGFIDP---SLRNEY---PLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 581 ~~~~~~~~~~~~~-------~~~~l~~~~d~---~l~~~~---~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
...+........ ..+....++.. ..+..+ ......++.+++.+||+.||.+|||+.||+.+
T Consensus 225 -~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 225 -LKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred -HHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 111111111000 00000011100 000000 01235678999999999999999999999864
No 374
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=7.3e-31 Score=265.16 Aligned_cols=256 Identities=24% Similarity=0.359 Sum_probs=195.8
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc------cHHHHHHHHHhcCC--C----CceeEeeEE
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG------DVSSEINILKKINH--S----NIIRLSGFC 423 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~------~~~~E~~~l~~l~H--~----niv~l~g~~ 423 (669)
..|.+-++ +|+|.| |.|-....+ +..||||++|. ...-|+++|.++++ | -+|.+.++|
T Consensus 89 ~Ry~i~~~-lGeGtF-------GkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF 160 (415)
T KOG0671|consen 89 NRYEIVDL-LGEGTF-------GKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF 160 (415)
T ss_pred cceehhhh-hcCCcc-------cceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh
Confidence 35666564 899999 888887764 67899999974 34569999999943 2 378899999
Q ss_pred EecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeec-------
Q 005923 424 VHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLD------- 496 (669)
Q Consensus 424 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~------- 496 (669)
...++.++|+|.+ |-|+.++|..+ ...+++..++..|++|++++++|||+.+ ++|.||||+|||+-
T Consensus 161 dyrghiCivfell-G~S~~dFlk~N---~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 161 DYRGHICIVFELL-GLSTFDFLKEN---NYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred hccCceEEEEecc-ChhHHHHhccC---CccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEE
Confidence 9999999999999 44999999876 3456889999999999999999999999 99999999999993
Q ss_pred -------------CCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHH
Q 005923 497 -------------TNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 563 (669)
Q Consensus 497 -------------~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~el 563 (669)
.+..+||+|||.|+...... ...+.|..|.|||++.+-.++.++||||+||||.|+
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~El 302 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVEL 302 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCc-----------ceeeeccccCCchheeccCcCCccCceeeeeEEEEe
Confidence 13458999999998754332 346789999999999999999999999999999999
Q ss_pred HcCCCCCCCCchhHHHHHHHHHHHHHhhhhHH----hhhhc-----ccC---------------Ccc----CCCCcHHHH
Q 005923 564 LSGREAVTGDQNCEAELLYASISRVLEESNVR----EKLRG-----FID---------------PSL----RNEYPLDLA 615 (669)
Q Consensus 564 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~-----~~d---------------~~l----~~~~~~~~~ 615 (669)
.+|...|.+.++.|- + +.+.+++...... ....+ -+| +.. .......+.
T Consensus 303 ytG~~LFqtHen~EH--L-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~ 379 (415)
T KOG0671|consen 303 YTGETLFQTHENLEH--L-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEH 379 (415)
T ss_pred eccceecccCCcHHH--H-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHH
Confidence 999999997765432 1 3334444321110 00000 011 000 001123445
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 616 FSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 616 ~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.++.+|+++||..||.+|+|+.|++.+
T Consensus 380 ~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 380 VQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred hHHHHHHHHHHccCccccccHHHHhcC
Confidence 669999999999999999999999864
No 375
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-30 Score=278.21 Aligned_cols=234 Identities=25% Similarity=0.345 Sum_probs=190.1
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc---HHHHHHHHHhc-CCCCceeEeeEEEecCceeEE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD---VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~---~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 432 (669)
.|.+.+ ++|.|.| +.|-++.. .++..+||++... ..+|+.++.+. +|||++++.+.+.++.+.|+|
T Consensus 323 ~y~~~~-~~~~gs~-------s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v 394 (612)
T KOG0603|consen 323 SYEFRE-ELGEGSF-------SAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV 394 (612)
T ss_pred hhcccc-ccCCCCc-------cceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeee
Confidence 344433 4788888 77777766 4677899998654 77888887776 699999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeee-cCCCcEEEcccCCccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL-DTNLRAKITNFGLARS 511 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl-~~~~~~kl~DfGla~~ 511 (669)
||.+.+|-|.+.+...+ .....+.+|+.+|+.|+.|||+++ +|||||||+|||+ ++.++++|+|||.++.
T Consensus 395 ~e~l~g~ell~ri~~~~------~~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 395 MELLDGGELLRRIRSKP------EFCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSE 465 (612)
T ss_pred ehhccccHHHHHHHhcc------hhHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhh
Confidence 99999998888887542 222778889999999999999999 9999999999999 6899999999999998
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
....- -+..-|..|.|||++....+++++|+||||++||+||+|+.||....+.. .+
T Consensus 466 ~~~~~-----------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~------ei------ 522 (612)
T KOG0603|consen 466 LERSC-----------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI------EI------ 522 (612)
T ss_pred Cchhh-----------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH------HH------
Confidence 76541 12345788999999999999999999999999999999999998654321 00
Q ss_pred hhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 592 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
...+- .+.+........++|+.+||+.||.+||+|.++..+
T Consensus 523 ------~~~i~----~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 523 ------HTRIQ----MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred ------HHhhc----CCccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 01111 123335667789999999999999999999999865
No 376
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-30 Score=263.08 Aligned_cols=233 Identities=26% Similarity=0.407 Sum_probs=195.0
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEECCC--eeEEEEecccH----------HHHHHHHHhc-CCCCceeEeeEEE
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFKGD--DAAVKVMKGDV----------SSEINILKKI-NHSNIIRLSGFCV 424 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g~--~vavK~~~~~~----------~~E~~~l~~l-~H~niv~l~g~~~ 424 (669)
..|.|-.+ +|.|+| |+|.++..+|. .+|||+++.++ ..|-++|..- +-|.+++|..++.
T Consensus 349 tDFnFl~V-lGKGSF-------GKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQ 420 (683)
T KOG0696|consen 349 TDFNFLMV-LGKGSF-------GKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQ 420 (683)
T ss_pred cccceEEE-eccCcc-------ceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhh
Confidence 34555444 899999 99999998754 58999998753 2466666655 4678999999999
Q ss_pred ecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc
Q 005923 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504 (669)
Q Consensus 425 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 504 (669)
.-+.+|+||||+.+|+|.-+++.- +.+.+....-+|.+||-||-|||+++ |++||||..|||+|.+|++||+
T Consensus 421 TmDRLyFVMEyvnGGDLMyhiQQ~-----GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~ 492 (683)
T KOG0696|consen 421 TMDRLYFVMEYVNGGDLMYHIQQV-----GKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIA 492 (683)
T ss_pred hhhheeeEEEEecCchhhhHHHHh-----cccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEee
Confidence 999999999999999999998753 45788889999999999999999999 9999999999999999999999
Q ss_pred ccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYAS 584 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 584 (669)
|||+++..-.+ ...++...||+.|+|||.+..+.|+..+|+|||||+||||+.|+.||++++.. .+++.
T Consensus 493 DFGmcKEni~~--------~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~---elF~a 561 (683)
T KOG0696|consen 493 DFGMCKENIFD--------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED---ELFQA 561 (683)
T ss_pred ecccccccccC--------CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHH
Confidence 99999864332 35688899999999999999999999999999999999999999999987642 22222
Q ss_pred HHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC
Q 005923 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS 635 (669)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 635 (669)
+++.. -.||..+..+..++.+..+.++|.+|..
T Consensus 562 ----------------I~ehn--vsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 562 ----------------IMEHN--VSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ----------------HHHcc--CcCcccccHHHHHHHHHHhhcCCccccC
Confidence 12221 3577788888999999999999999964
No 377
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=1.8e-29 Score=253.80 Aligned_cols=227 Identities=34% Similarity=0.509 Sum_probs=185.8
Q ss_pred eEEEEEEEC--CCeeEEEEec--------ccHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCC
Q 005923 380 GSVYRGSFK--GDDAAVKVMK--------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR 449 (669)
Q Consensus 380 G~Vy~g~~~--g~~vavK~~~--------~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~ 449 (669)
|.||+|... |+.+++|+.. .++.+|++.+++++|+|++++++++..+...+++|||+++++|.+++....
T Consensus 3 g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~ 82 (244)
T smart00220 3 GKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRG 82 (244)
T ss_pred eEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhcc
Confidence 899999985 5889999984 356789999999999999999999999899999999999999999997542
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeee
Q 005923 450 YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRH 529 (669)
Q Consensus 450 ~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~ 529 (669)
.+++..+..++.+++.++.|||+.+ ++|+||+|+||++++++.++|+|||.+....... ....
T Consensus 83 -----~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---------~~~~ 145 (244)
T smart00220 83 -----RLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---------LLTT 145 (244)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc---------cccc
Confidence 2899999999999999999999998 9999999999999999999999999998765432 1233
Q ss_pred cccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCC
Q 005923 530 VVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNE 609 (669)
Q Consensus 530 ~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~ 609 (669)
..++..|++||.+.+..++.++|||+||++++||++|..|+......+ .... .+. . ......
T Consensus 146 ~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~--~~~~----~~~---------~---~~~~~~ 207 (244)
T smart00220 146 FVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL--ELFK----KIG---------K---PKPPFP 207 (244)
T ss_pred ccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH--HHHH----HHh---------c---cCCCCc
Confidence 467889999999998899999999999999999999999987532211 1100 000 0 000000
Q ss_pred CcH-HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 610 YPL-DLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 610 ~~~-~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
... ..+.++.+++.+||..+|++||++.++++
T Consensus 208 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 208 PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred cccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 000 14567899999999999999999999986
No 378
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.96 E-value=2.8e-30 Score=252.66 Aligned_cols=245 Identities=22% Similarity=0.315 Sum_probs=192.2
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc--cHHHHHHHHHhc-CCCCceeEeeEEEe----cCce
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG--DVSSEINILKKI-NHSNIIRLSGFCVH----EGNT 429 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~--~~~~E~~~l~~l-~H~niv~l~g~~~~----~~~~ 429 (669)
.|++..-.+|-|-- |+|-.... .|+.+|+|++.+ ...+|+++--.. .|||||++++++.+ ...+
T Consensus 62 dY~is~qvLG~Gin-------GkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 62 DYSISWQVLGAGIN-------GKVVQCVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hheehhhhhccccC-------CceEEEEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 35554445788877 88877766 488899999975 467888876655 59999999999864 3467
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC---CCcEEEccc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT---NLRAKITNF 506 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~---~~~~kl~Df 506 (669)
.+|||+|+||.|...+..++ ...+++++...|+.||+.|+.|||+.+ |.||||||+|+|... |-.+||+||
T Consensus 135 LiVmE~meGGeLfsriq~~g---~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRG---DQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred EeeeecccchHHHHHHHHcc---cccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEeccc
Confidence 89999999999999998763 456999999999999999999999999 999999999999954 567999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
|+|+...... ......-|+.|.|||++...+|....|+||+||+||-|++|-.||....... +.
T Consensus 209 GFAK~t~~~~---------~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a-------is 272 (400)
T KOG0604|consen 209 GFAKETQEPG---------DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-------IS 272 (400)
T ss_pred ccccccCCCc---------cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-------CC
Confidence 9999765422 2344577999999999999999999999999999999999999998533210 00
Q ss_pred HHHhhhhHHhhhhcccCCccCCCCc----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 587 RVLEESNVREKLRGFIDPSLRNEYP----LDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 587 ~~~~~~~~~~~l~~~~d~~l~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
...+ +.+....+ .+| ....+...++|+..|..+|.+|.|+.|++..
T Consensus 273 -----pgMk---~rI~~gqy--~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 273 -----PGMK---RRIRTGQY--EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred -----hhHH---hHhhccCc--cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 0001 11111111 222 2445667899999999999999999999865
No 379
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-29 Score=230.27 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=195.2
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
++|+|.| |+||+|+.. ++.||+|..+- ...+|+-+|+.++|.|||+++++...+..+-||+|
T Consensus 9 kigegty-------gtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 9 KIGEGTY-------GTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred hhcCCcc-------eeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 6999999 999999874 67899999863 26789999999999999999999988999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+.. +|..|...- .+.++.+....++.|+++||.|+|+++ +.|||+||.|.|++.+|.+|++|||++|.++-
T Consensus 82 ~cdq-dlkkyfdsl----ng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgi 153 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDSL----NGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGI 153 (292)
T ss_pred HhhH-HHHHHHHhc----CCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCC
Confidence 9975 899998653 356899999999999999999999999 99999999999999999999999999998764
Q ss_pred CccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhh
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEES 592 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (669)
.- ......+-|.+|.+|.++.+ ..|+...|+||-||++.|+.. |+..|.+.+.. .....+.+.+...
T Consensus 154 pv--------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd---dqlkrif~~lg~p 222 (292)
T KOG0662|consen 154 PV--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD---DQLKRIFRLLGTP 222 (292)
T ss_pred ce--------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH---HHHHHHHHHhCCC
Confidence 32 12233467899999999987 458999999999999999987 55555554322 2223444444332
Q ss_pred hHH--hhhhcccCCccCCCCcH---------HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 593 NVR--EKLRGFIDPSLRNEYPL---------DLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 593 ~~~--~~l~~~~d~~l~~~~~~---------~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
... ..+..+-|...-.-+|. .+...-++|+.+.+.-+|.+|.++++.++.
T Consensus 223 ~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 223 TEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred ccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 221 22333334333333332 222234688999999999999999988753
No 380
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=1e-29 Score=278.08 Aligned_cols=245 Identities=26% Similarity=0.409 Sum_probs=186.1
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEECCCeeEEEEeccc----HHHHHHHHHhc-CCCCceeEeeEEEecCceeEEEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGD----VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~~----~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e 434 (669)
|.-+|+ +|.|+-+ +.||+|.++|+.||||++-.+ ..+|+..|+.- +|||||++++.-.++...|+..|
T Consensus 511 ~~~~ei-lG~Gs~G------t~Vf~G~ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEI-LGYGSNG------TVVFRGVYEGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHH-cccCCCC------cEEEEEeeCCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 444554 6677652 579999999999999998654 45899999988 59999999999888889999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC-----CCcEEEcccCCc
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT-----NLRAKITNFGLA 509 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~-----~~~~kl~DfGla 509 (669)
.+.. +|.|++.... .......-...+.+..|++.||+|||+.+ ||||||||.||||+. ..+++|+|||++
T Consensus 584 LC~~-sL~dlie~~~-~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfgls 658 (903)
T KOG1027|consen 584 LCAC-SLQDLIESSG-LDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLS 658 (903)
T ss_pred Hhhh-hHHHHHhccc-cchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccc
Confidence 9976 9999998641 11111111345678899999999999999 999999999999965 257999999999
Q ss_pred cccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcC-CCCCCCCchhHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG-REAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
+.+..+... ........||-+|+|||.+....-+.++|+||+|||+|+.++| ..||......+.. +
T Consensus 659 Kkl~~~~sS-----~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N--------I 725 (903)
T KOG1027|consen 659 KKLAGGKSS-----FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN--------I 725 (903)
T ss_pred cccCCCcch-----hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhh--------h
Confidence 998765421 2234557899999999999999999999999999999999996 7888653322111 1
Q ss_pred HhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 589 LEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 589 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
+... ..+. .+. ...++ +..+||.+|++.||..||++.+|+.
T Consensus 726 l~~~---~~L~-----~L~--~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 726 LTGN---YTLV-----HLE--PLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred hcCc---ccee-----eec--cCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1110 0000 011 11122 6789999999999999999999974
No 381
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=4.2e-31 Score=252.48 Aligned_cols=252 Identities=22% Similarity=0.382 Sum_probs=189.4
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEec---------ccHHHHHHHHHhcCCCCceeEeeEEEec--------
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMK---------GDVSSEINILKKINHSNIIRLSGFCVHE-------- 426 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~---------~~~~~E~~~l~~l~H~niv~l~g~~~~~-------- 426 (669)
++|.|.| |.||+++.+ |+.||+|+.- ....+|+++|..+.|+|++.++..|...
T Consensus 24 kigqGtf-------geVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 24 KIGQGTF-------GEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hcCCchH-------HHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 5899999 999999873 6778887642 1356899999999999999999998643
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
...||||+++++ +|.-.|.+.. ..++...+.+++.++.+||.|+|... |+|||+|+.|+||+.++.+||+||
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~----vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADF 168 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRK----VRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADF 168 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCcc----ccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecc
Confidence 357999999997 8999987642 45899999999999999999999998 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 585 (669)
|++|.+........ . .....+-|..|++||.+.+ ..++++.|||.-||||.||+++...+.+...... ...+
T Consensus 169 Glar~fs~~~n~~k---p-rytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqq---l~~I 241 (376)
T KOG0669|consen 169 GLARAFSTSKNVVK---P-RYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQ---LHLI 241 (376)
T ss_pred ccccceecccccCC---C-CcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHH---HHHH
Confidence 99988755443221 1 1234567999999999987 6799999999999999999999988887654322 2233
Q ss_pred HHHHhhhhH--------Hhhhhcc------------cCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 586 SRVLEESNV--------REKLRGF------------IDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 586 ~~~~~~~~~--------~~~l~~~------------~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
..+...-.. ......+ +..+++ ++ .-..+..+|+..++..||.+|+++++++.+
T Consensus 242 s~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~k-p~--~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 242 SQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLK-PY--VKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred HHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcc-cc--cCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 322221100 0001111 111111 00 012357899999999999999999887643
No 382
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7e-30 Score=260.40 Aligned_cols=246 Identities=26% Similarity=0.445 Sum_probs=193.9
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEec--c------------cHHHHHHHHHhcCCCCceeEeeEEEec-Cce
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMK--G------------DVSSEINILKKINHSNIIRLSGFCVHE-GNT 429 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~--~------------~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~ 429 (669)
+|.|+| ..||++.. ..+.||||+-. . ...+|.+|-+.|.||.||++++|+.-+ +..
T Consensus 471 LGrGGF-------SEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 471 LGRGGF-------SEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred hccccH-------HHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 799999 77999976 57789999752 1 245799999999999999999998754 567
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC---CCcEEEccc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT---NLRAKITNF 506 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~---~~~~kl~Df 506 (669)
|-|+||++|.+|.-||+.++ .++++....|+.||..||.||.+. +|||||-||||.|||+-+ -|.+||.||
T Consensus 544 CTVLEYceGNDLDFYLKQhk-----lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQHK-----LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred eeeeeecCCCchhHHHHhhh-----hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 99999999999999998763 589999999999999999999987 589999999999999954 478999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG----VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~ 582 (669)
||++.+..+.+. ...+..++....||.+|++||++.-+ +++.|.||||.||++|..+.|+.||.......
T Consensus 618 GLSKIMdddSy~-~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ----- 691 (775)
T KOG1151|consen 618 GLSKIMDDDSYN-SVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ----- 691 (775)
T ss_pred chhhhccCCccC-cccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH-----
Confidence 999998766543 22345678889999999999998643 57899999999999999999999998654321
Q ss_pred HHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 583 ASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 583 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.++++..+..... ...+....+..+...+|++||++.-++|....++..
T Consensus 692 ----dILqeNTIlkAtE------VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 692 ----DILQENTILKATE------VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred ----HHHhhhchhccee------ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 2233222111000 001111234456789999999999999988777653
No 383
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3.1e-29 Score=275.61 Aligned_cols=244 Identities=24% Similarity=0.461 Sum_probs=199.2
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc------cHHHHHHHHHhc-CCCCceeEeeEEEe----
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG------DVSSEINILKKI-NHSNIIRLSGFCVH---- 425 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~------~~~~E~~~l~~l-~H~niv~l~g~~~~---- 425 (669)
.|.+.|. +|.|.+ |.||+++. +++.+|+|++.. +++.|.++|+.. +|||++.++|++..
T Consensus 20 ~~ei~ev-ig~Gty-------gkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~ 91 (953)
T KOG0587|consen 20 IFEIIEV-IGNGTY-------GKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPG 91 (953)
T ss_pred ccEEEEE-Eeeccc-------eeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCC
Confidence 3455553 888888 88887765 688899998853 456677888887 69999999999874
Q ss_pred -cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc
Q 005923 426 -EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504 (669)
Q Consensus 426 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 504 (669)
++.+|||||||.+||..|++++.+ +..+.|..+..|++.++.||.|||... ++|||||-.|||++.++.+|+.
T Consensus 92 ~~DqLWLVMEfC~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLv 165 (953)
T KOG0587|consen 92 NGDQLWLVMEFCGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLV 165 (953)
T ss_pred CCCeEEEEeeccCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEe
Confidence 468999999999999999998764 678999999999999999999999998 9999999999999999999999
Q ss_pred ccCCccccCCCccccCCcccceeeeccccccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHH
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-----GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~ 579 (669)
|||.+..+...- .......||+.|||||++.. ..|+.++|+||+|++..||--|..|+.+.....
T Consensus 166 DFGvSaQldsT~--------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr-- 235 (953)
T KOG0587|consen 166 DFGVSAQLDSTV--------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR-- 235 (953)
T ss_pred eeeeeeeeeccc--------ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh--
Confidence 999998775432 22455789999999999964 457789999999999999999999987643211
Q ss_pred HHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
..+.-.-+|......|..-..++-++|..||.+|-.+||++.+++++
T Consensus 236 ----------------aLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 236 ----------------ALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ----------------hhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 11112223444445567778889999999999999999999988753
No 384
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=5.7e-30 Score=265.83 Aligned_cols=237 Identities=27% Similarity=0.452 Sum_probs=192.2
Q ss_pred hHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 363 QDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 363 ~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
.|..+|.|.| |+||-|+. .|+.||||++.+ .+..|+.||++++||.||.|-..|+..+..++
T Consensus 568 ~devLGSGQF-------G~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFV 640 (888)
T KOG4236|consen 568 ADEVLGSGQF-------GTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFV 640 (888)
T ss_pred hHhhccCCcc-------eeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEE
Confidence 4456899999 99999988 599999999843 36789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC---CcEEEcccCC
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN---LRAKITNFGL 508 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~---~~~kl~DfGl 508 (669)
|||-+. |++.+.+-.. ..++|++..-..++.||+.||.|||.++ |+|+||||+|||+.+. -++||||||+
T Consensus 641 VMEKl~-GDMLEMILSs---EkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGf 713 (888)
T KOG4236|consen 641 VMEKLH-GDMLEMILSS---EKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGF 713 (888)
T ss_pred Eehhhc-chHHHHHHHh---hcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccc
Confidence 999995 5777766543 3467999998999999999999999999 9999999999999653 4799999999
Q ss_pred ccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 509 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
||.++... ..+.++||+.|+|||++.+..|....|+||.||++|--++|..||..+.+-. ..
T Consensus 714 ARiIgEks---------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn---------dQ 775 (888)
T KOG4236|consen 714 ARIIGEKS---------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN---------DQ 775 (888)
T ss_pred eeecchhh---------hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh---------HH
Confidence 99987542 4567899999999999999999999999999999999999999998544311 11
Q ss_pred HhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 589 LEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 589 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
++. ..|+-|. ..-.+......+||...|+..-.+|-|.+.-+.
T Consensus 776 IQN-------AaFMyPp---~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 776 IQN-------AAFMYPP---NPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred hhc-------cccccCC---CchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 111 0112111 111244556789999999998888988876554
No 385
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.96 E-value=7.4e-31 Score=252.78 Aligned_cols=243 Identities=24% Similarity=0.377 Sum_probs=185.5
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhc-CCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e 434 (669)
++|.|.| |+|+|-..+ |+..|||+++. ++..|.+...+- +.||||+++|.+..++..|+.||
T Consensus 71 ~iG~G~f-------G~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME 143 (361)
T KOG1006|consen 71 EIGNGAF-------GTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME 143 (361)
T ss_pred HhcCCcc-------hhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence 5899999 999999885 88899999974 244566554443 68999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
.|+- ||..+-+.-.......+++.-+-+|.....+||+||...-+ |+|||+||+|||+|..|.+|+||||++..+..
T Consensus 144 LMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lk--iIHRDvKPSNILldr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 144 LMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELK--IIHRDVKPSNILLDRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred HHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhh--hhhccCChhheEEecCCCEeeecccchHhHHH
Confidence 9974 77766543211223468888889999999999999986542 99999999999999999999999999987654
Q ss_pred CccccCCcccceeeeccccccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhh
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIEN--GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEES 592 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (669)
+- ......|-..|||||.+.. ..|.-++||||+|++|+|+.||+.|+.+=++ .++.+..+..+.
T Consensus 221 Si---------AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfeql~~Vv~gd 286 (361)
T KOG1006|consen 221 SI---------AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFEQLCQVVIGD 286 (361)
T ss_pred HH---------HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHHHHHHHHcCC
Confidence 32 1233567888999999964 3488999999999999999999999875221 222233332221
Q ss_pred hHHhhhhcccCCccCCC-CcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 593 NVREKLRGFIDPSLRNE-YPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 593 ~~~~~l~~~~d~~l~~~-~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
. |.+..+ ........|..++.-|+.+|-.+||...++.++
T Consensus 287 p----------p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 287 P----------PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred C----------CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 1 111111 113356679999999999999999999998765
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=7.1e-29 Score=279.96 Aligned_cols=259 Identities=18% Similarity=0.231 Sum_probs=169.6
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEEC------CCeeEEEEecccHHHHHHHHHhcCC---CCceeEeeE------
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFK------GDDAAVKVMKGDVSSEINILKKINH---SNIIRLSGF------ 422 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~------g~~vavK~~~~~~~~E~~~l~~l~H---~niv~l~g~------ 422 (669)
..|.+.+ ++|.|+| |.||+|.+. +..+|+|+++.....|..+..+++| .+++.++..
T Consensus 132 ~~y~l~~-~LG~G~F-------G~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 132 DDFVLGK-KLGEGAF-------GVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred CCeEEeE-EEeeCCC-------eEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccc
Confidence 3455555 3999999 999999984 5689999987655555555444432 233322221
Q ss_pred EEecCceeEEEEecCCCCHHHHHhcCCCC---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeC
Q 005923 423 CVHEGNTYLVYEFADNGALSDWLHSNRYQ---------------TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKN 487 (669)
Q Consensus 423 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~---------------~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrD 487 (669)
+..+...++||||+.+++|.++++..... ......+..+..|+.||+.||+|||+.+ |+|||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRD 280 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRD 280 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCc
Confidence 23566789999999999999999754210 0011223456789999999999999998 99999
Q ss_pred CCCCCeeecC-CCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccC---------------------
Q 005923 488 LKTSNILLDT-NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG--------------------- 545 (669)
Q Consensus 488 ik~~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--------------------- 545 (669)
|||+|||+++ ++.+||+|||+++....... .......+++.|+|||.+...
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~-------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~ 353 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGIN-------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQ 353 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccc-------cCCcccccCCCccChHHhhccCCCCCCccccccccccchhcc
Confidence 9999999986 58999999999986543221 122345788999999966432
Q ss_pred -CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh-HHhhhhcccCCccCCC----C--cHHHHHH
Q 005923 546 -VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN-VREKLRGFIDPSLRNE----Y--PLDLAFS 617 (669)
Q Consensus 546 -~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~d~~l~~~----~--~~~~~~~ 617 (669)
.++.++|||||||+||||+++..+..... .. ....+.... ........+.+....+ + .......
T Consensus 354 ~~~~~k~DVwSlGviL~el~~~~~~~~~~~----~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 425 (566)
T PLN03225 354 LNLPDRFDIYSAGLIFLQMAFPNLRSDSNL----IQ----FNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGA 425 (566)
T ss_pred ccCCCCcccHHHHHHHHHHHhCcCCCchHH----HH----HHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchH
Confidence 23456799999999999998765543211 00 111111100 0011111111111000 0 0011223
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 618 MAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 618 l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
..+|+.+||+.||.+|||+.|++++
T Consensus 426 ~~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 426 GWELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred HHHHHHHHccCCcccCCCHHHHhCC
Confidence 5689999999999999999999975
No 387
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3e-29 Score=281.44 Aligned_cols=243 Identities=25% Similarity=0.362 Sum_probs=196.2
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
||.|.| |.|...+.+ ++.+|.|++.. -|..|-++|..-+.+-|++|.-.|.++.++|||||
T Consensus 83 IGrGaF-------GEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMd 155 (1317)
T KOG0612|consen 83 IGRGAF-------GEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMD 155 (1317)
T ss_pred hccccc-------ceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEe
Confidence 899999 999988874 66789998753 37789999998899999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
||+||+|..+|.+. ..+++.....++..|..||.-||+.| +|||||||.|||+|..|++||+|||-+-.+..
T Consensus 156 Y~pGGDlltLlSk~-----~~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGsClkm~~ 227 (1317)
T KOG0612|consen 156 YMPGGDLLTLLSKF-----DRLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDA 227 (1317)
T ss_pred cccCchHHHHHhhc-----CCChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchhHHhcCC
Confidence 99999999999764 36999999999999999999999999 99999999999999999999999999988765
Q ss_pred CccccCCcccceeeecccccccccccccc----c-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIE----N-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~----~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 589 (669)
++. ......+||+.|++||++. + +.|++.+|+||+||++|||+.|..||..+.- ..-
T Consensus 228 dG~-------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl------veT----- 289 (1317)
T KOG0612|consen 228 DGT-------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL------VET----- 289 (1317)
T ss_pred CCc-------EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH------HHH-----
Confidence 442 3344579999999999995 3 6799999999999999999999999985432 111
Q ss_pred hhhhHHhhhhcccCCccCCCCc--HHHHHHHHHHHHHhcccCCCCCCC---HHHHHHHHHHhhcCCCCCC
Q 005923 590 EESNVREKLRGFIDPSLRNEYP--LDLAFSMAQLAKNCTAHDLNARPS---ISEVFVTLSKIWSSSSDWD 654 (669)
Q Consensus 590 ~~~~~~~~l~~~~d~~l~~~~~--~~~~~~l~~li~~Cl~~dP~~RPt---~~evl~~L~~i~~~~~~~~ 654 (669)
...+++-.-...+| .+.+.+..+||++.+. +|..|.. ++++..+ -+-.-.||+
T Consensus 290 --------Y~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H---pFF~g~~W~ 347 (1317)
T KOG0612|consen 290 --------YGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH---PFFEGIDWD 347 (1317)
T ss_pred --------HHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC---ccccCCChh
Confidence 22222221122333 4567788999988774 6778887 7776654 234445564
No 388
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=263.11 Aligned_cols=246 Identities=25% Similarity=0.351 Sum_probs=204.4
Q ss_pred HHhCCCCcccceeeEEEEEEECCCe--eEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFKGDD--AAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g~~--vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
+|-|+| |.|-....+++. .|+|.++. .+..|-.+|.+.+.|.||+|+..|.+....||+||
T Consensus 428 LGvGgF-------GRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 428 LGVGGF-------GRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred cccCcc-------ceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 699999 999999988766 68888864 35679999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
-+-||.|...|+++ +.++......++..+.+|++|||+++ ||+|||||+|.++|.+|.+||.|||+|+.+..
T Consensus 501 aClGGElWTiLrdR-----g~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 501 ACLGGELWTILRDR-----GSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hhcCchhhhhhhhc-----CCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 99999999999875 45778888889999999999999999 99999999999999999999999999999876
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
+. .+....||+.|.|||.+.+.....++|.||+|++++||++|..||.+.+....+. .+.+.++
T Consensus 573 g~---------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn---~ILkGid---- 636 (732)
T KOG0614|consen 573 GR---------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYN---LILKGID---- 636 (732)
T ss_pred CC---------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHH---HHHhhhh----
Confidence 43 4778999999999999999999999999999999999999999999866532222 1211111
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC--HHHHHHHHHHhhcCCCCCCC
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS--ISEVFVTLSKIWSSSSDWDP 655 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt--~~evl~~L~~i~~~~~~~~~ 655 (669)
.-.+|........+|+++....+|.+|.. ...|-+.=.-.+-...||+-
T Consensus 637 ------------~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweg 687 (732)
T KOG0614|consen 637 ------------KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEG 687 (732)
T ss_pred ------------hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhh
Confidence 12456666777889999999999999986 33333333334566677763
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.95 E-value=6.3e-28 Score=265.99 Aligned_cols=259 Identities=20% Similarity=0.239 Sum_probs=176.6
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE------------------CCCeeEEEEecc-------cH-----------
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF------------------KGDDAAVKVMKG-------DV----------- 401 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~------------------~g~~vavK~~~~-------~~----------- 401 (669)
..|++.+ ++|+|+| |.||+|.+ ++..||||+++. +|
T Consensus 145 d~F~i~~-~LG~GgF-------G~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~ 216 (507)
T PLN03224 145 DDFQLRD-KLGGGNF-------GITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSA 216 (507)
T ss_pred cCceEee-EeecCCC-------eEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhccc
Confidence 3455554 4899999 99999964 245799999753 12
Q ss_pred ---HHHHHHHHhcCCCCc-----eeEeeEEEe--------cCceeEEEEecCCCCHHHHHhcCCC---------------
Q 005923 402 ---SSEINILKKINHSNI-----IRLSGFCVH--------EGNTYLVYEFADNGALSDWLHSNRY--------------- 450 (669)
Q Consensus 402 ---~~E~~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~~--------------- 450 (669)
..|+.++.+++|.++ ++++++|.. ++..+|||||+++|+|.++|+....
T Consensus 217 e~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~ 296 (507)
T PLN03224 217 ETGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKK 296 (507)
T ss_pred chhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCc
Confidence 236777777766554 778888763 3568999999999999999975311
Q ss_pred ----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccce
Q 005923 451 ----QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526 (669)
Q Consensus 451 ----~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 526 (669)
.....++|..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++........ .
T Consensus 297 l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-------~ 366 (507)
T PLN03224 297 IPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-------N 366 (507)
T ss_pred hhhhcccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-------C
Confidence 01124678899999999999999999998 999999999999999999999999999765432210 1
Q ss_pred eeecccccccccccccccCCC----------------------CchhhHHHHHHHHHHHHcCCC-CCCCCchhHHHHHHH
Q 005923 527 TRHVVGTYGYMAPEYIENGVI----------------------TPKLDVFAFGVVVLELLSGRE-AVTGDQNCEAELLYA 583 (669)
Q Consensus 527 ~~~~~gt~~y~aPE~l~~~~~----------------------s~~sDV~S~Gvvl~elltg~~-p~~~~~~~~~~~~~~ 583 (669)
.....+++.|+|||.+..... ..+.||||+||+++||++|.. |+.+......+.
T Consensus 367 ~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~--- 443 (507)
T PLN03224 367 PLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTEL--- 443 (507)
T ss_pred ccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHH---
Confidence 112344789999998864321 234799999999999999875 554321111000
Q ss_pred HHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCC---CCCCCHHHHHHH
Q 005923 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDL---NARPSISEVFVT 642 (669)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP---~~RPt~~evl~~ 642 (669)
.. ........+....................+|+.++|..+| .+|+|++|++.+
T Consensus 444 --~~---~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 444 --RQ---YDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred --hh---ccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 00 0000000111111111111122334568899999999866 689999999864
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.6e-28 Score=238.04 Aligned_cols=228 Identities=25% Similarity=0.423 Sum_probs=186.2
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc----------HHHHHHHHHhc-CCCCceeEeeEEEecCceeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD----------VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~----------~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 433 (669)
+|.|+| .+|..+++. .+.+|+|++|.+ +..|-.+..+- +||.+|-|..+|..+..+++|.
T Consensus 258 igrgsy-------akvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvi 330 (593)
T KOG0695|consen 258 IGRGSY-------AKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVI 330 (593)
T ss_pred ecCcch-------hhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEE
Confidence 899999 788888774 567899998764 34566666665 7999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
||+++|+|.-++++. +.|+++....+..+|..||.|||+.+ |+.||||..|||+|..|++|+.|+|+++..-
T Consensus 331 eyv~ggdlmfhmqrq-----rklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 331 EYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEecCcceeeehhhh-----hcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999888765 45999999999999999999999999 9999999999999999999999999998654
Q ss_pred CCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCC--CCchhH---HHHHHHHHHHH
Q 005923 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT--GDQNCE---AELLYASISRV 588 (669)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~--~~~~~~---~~~~~~~~~~~ 588 (669)
.+ ..++....||+.|+|||.+.+..|....|.|++||+|+||+.|+.||+ +.++.+ +..+++.+
T Consensus 403 ~~--------gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi--- 471 (593)
T KOG0695|consen 403 GP--------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI--- 471 (593)
T ss_pred CC--------CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH---
Confidence 33 245677899999999999999999999999999999999999999998 333221 12222221
Q ss_pred HhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCC
Q 005923 589 LEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPS 635 (669)
Q Consensus 589 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 635 (669)
++..+ ..|..+..+...+++.-|.+||.+|..
T Consensus 472 -------------lekqi--riprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 472 -------------LEKQI--RIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred -------------hhhcc--cccceeehhhHHHHHHhhcCCcHHhcC
Confidence 11112 234455556778899999999999864
No 391
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.7e-29 Score=240.72 Aligned_cols=252 Identities=25% Similarity=0.370 Sum_probs=190.2
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec-----Cce
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE-----GNT 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 429 (669)
-||-|.| |.||.... +|+.||+|++.. .+.+|+++|.-++|.|++..++...-. .+.
T Consensus 60 PIGYGAF-------GVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 60 PIGYGAF-------GVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred cccccce-------eEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 3899999 99999887 689999999853 466899999999999999998876432 357
Q ss_pred eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCc
Q 005923 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 430 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla 509 (669)
|++.|.|.. +|.+.+- ....|+-..+.-+.+||++||.|||+.+ |.||||||.|.|+++|..+||+|||++
T Consensus 133 YV~TELmQS-DLHKIIV-----SPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 133 YVLTELMQS-DLHKIIV-----SPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred HHHHHHHHh-hhhheec-----cCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccc
Confidence 889999865 7877774 3457888999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH
Q 005923 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRV 588 (669)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 588 (669)
|..+.++. .-..+.+-|..|.|||.+.+ ..|+.+.||||.||++.||+..+..|.....-+. .+.+..+
T Consensus 204 Rvee~d~~-------~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQ---L~lItdL 273 (449)
T KOG0664|consen 204 RTWDQRDR-------LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQ---LQMIIDL 273 (449)
T ss_pred cccchhhh-------hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHH---HHHHHHH
Confidence 98765432 11234566899999999987 5699999999999999999998888875544322 1223333
Q ss_pred HhhhhH-----------Hhhhhccc-CCccCC----CCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 589 LEESNV-----------REKLRGFI-DPSLRN----EYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 589 ~~~~~~-----------~~~l~~~~-d~~l~~----~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
+..+.. ...++.-. .|.+.- ..+.+-..+...+...++..||+.|.+..+.+..+
T Consensus 274 LGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 274 LGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 322211 11122211 111111 11123334567888899999999999999988764
No 392
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=2.5e-27 Score=250.90 Aligned_cols=196 Identities=26% Similarity=0.376 Sum_probs=161.8
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 434 (669)
||-|.| |.|.++.-. ...+|.|.+++ .+..|-+||..-..+-||+|+-.|.+++.+|+|||
T Consensus 637 iGvGAF-------GeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 637 IGVGAF-------GEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred eccccc-------ceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 577888 888887653 34568888753 25679999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|++||++..+|-+. +.+.+.....++.++..|+++.|..| +|||||||.|||||.+|++||.||||+.-+..
T Consensus 710 YIPGGDmMSLLIrm-----gIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW 781 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRM-----GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 781 (1034)
T ss_pred ccCCccHHHHHHHh-----ccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeecccccccee
Confidence 99999999999765 45788888889999999999999999 99999999999999999999999999864321
Q ss_pred Cc---cccCC-------c------------------------ccceeeecccccccccccccccCCCCchhhHHHHHHHH
Q 005923 515 DE---HEQGG-------Y------------------------GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVV 560 (669)
Q Consensus 515 ~~---~~~~~-------~------------------------~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl 560 (669)
.. +...+ + ...+....+||..|+|||++....++..+|+||.||||
T Consensus 782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil 861 (1034)
T KOG0608|consen 782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL 861 (1034)
T ss_pred ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence 10 00000 0 00112245899999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCchhH
Q 005923 561 LELLSGREAVTGDQNCE 577 (669)
Q Consensus 561 ~elltg~~p~~~~~~~~ 577 (669)
+||+.|+.||..+...+
T Consensus 862 ~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 862 YEMLVGQPPFLADTPGE 878 (1034)
T ss_pred HHHhhCCCCccCCCCCc
Confidence 99999999998766544
No 393
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=2.9e-26 Score=224.41 Aligned_cols=203 Identities=37% Similarity=0.649 Sum_probs=178.0
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc--------HHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD--------VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~--------~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
+++|.+ |.||++... ++.+++|+.... +.+|++.+++++|++++++++++......++++||+
T Consensus 1 l~~g~~-------~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~ 73 (215)
T cd00180 1 LGEGGF-------GTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYC 73 (215)
T ss_pred CCcCCc-------eEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecC
Confidence 367888 999999997 889999998643 778999999999999999999999989999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC-CCcEEEcccCCccccCCC
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT-NLRAKITNFGLARSAESD 515 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~-~~~~kl~DfGla~~~~~~ 515 (669)
.+++|.+++.... ..+++..+..++.+++.++++||+.+ ++|+||+|.||+++. ++.++|+|||.+......
T Consensus 74 ~~~~l~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~ 146 (215)
T cd00180 74 EGGSLKDLLKENE----GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD 146 (215)
T ss_pred CCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence 9999999997541 35899999999999999999999998 999999999999999 899999999999876543
Q ss_pred ccccCCcccceeeecccccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.. ......+...|++||.+... ..+.+.|+|++|+++++|
T Consensus 147 ~~--------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------- 187 (215)
T cd00180 147 KS--------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------- 187 (215)
T ss_pred cc--------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------
Confidence 21 12234567889999999887 889999999999999998
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
..+.+++.+|++.||.+||++.++++.|
T Consensus 188 ---------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ---------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 2478999999999999999999998653
No 394
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=2.2e-27 Score=246.83 Aligned_cols=253 Identities=23% Similarity=0.318 Sum_probs=193.4
Q ss_pred HHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc------HHHHHHHHHhcCC------CCceeEeeEEEecCceeEE
Q 005923 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD------VSSEINILKKINH------SNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~------~~~E~~~l~~l~H------~niv~l~g~~~~~~~~~lV 432 (669)
.|.|-| ++|.+|.. .|..||||+++.. =..|+++|++|+. -|.++|+..|.+.+++|||
T Consensus 440 ~GkGvF-------s~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClV 512 (752)
T KOG0670|consen 440 TGKGVF-------STVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLV 512 (752)
T ss_pred ccccee-------eeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEE
Confidence 578888 88999987 4889999999753 2479999999963 4899999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC-CcEEEcccCCccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN-LRAKITNFGLARS 511 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~-~~~kl~DfGla~~ 511 (669)
||-+. -+|.+.|++-. ..-.|....+..++.|++.||.+|..++ |+|.||||.|||+++. ..+||||||.|..
T Consensus 513 FE~Ls-lNLRevLKKyG--~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 513 FEPLS-LNLREVLKKYG--RNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGSASF 586 (752)
T ss_pred ehhhh-chHHHHHHHhC--cccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCccccc
Confidence 99996 49999998753 3345888999999999999999999999 9999999999999875 5689999999987
Q ss_pred cCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (669)
..... .....-...|.|||.+.+-.|+...|+||.||.||||.||+..|.|..+....-+...+..-+..
T Consensus 587 ~~ene----------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~ 656 (752)
T KOG0670|consen 587 ASENE----------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPN 656 (752)
T ss_pred ccccc----------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcH
Confidence 65433 12234466899999999999999999999999999999999999987765433332222211111
Q ss_pred hhHHh--h--------------------------hhcccCC------ccC--CCCc---HHHHHHHHHHHHHhcccCCCC
Q 005923 592 SNVRE--K--------------------------LRGFIDP------SLR--NEYP---LDLAFSMAQLAKNCTAHDLNA 632 (669)
Q Consensus 592 ~~~~~--~--------------------------l~~~~d~------~l~--~~~~---~~~~~~l~~li~~Cl~~dP~~ 632 (669)
...+. . +...+.| .+. ..+| ......+.+|+..|+..||++
T Consensus 657 KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~K 736 (752)
T KOG0670|consen 657 KMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEK 736 (752)
T ss_pred HHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhh
Confidence 11000 0 0001111 000 1122 234566889999999999999
Q ss_pred CCCHHHHHHH
Q 005923 633 RPSISEVFVT 642 (669)
Q Consensus 633 RPt~~evl~~ 642 (669)
|.|..+.+++
T Consensus 737 Rit~nqAL~H 746 (752)
T KOG0670|consen 737 RITVNQALKH 746 (752)
T ss_pred cCCHHHHhcC
Confidence 9999998864
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=2.1e-26 Score=217.58 Aligned_cols=255 Identities=19% Similarity=0.347 Sum_probs=191.5
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc----cHHHHHHHHHhcC-CCCceeEeeEEEec--Cc
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG----DVSSEINILKKIN-HSNIIRLSGFCVHE--GN 428 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~----~~~~E~~~l~~l~-H~niv~l~g~~~~~--~~ 428 (669)
..|.+.. ++|.|.| ..||.|.. +.+.++||++|. .+.+|+.+|..+. ||||+.|+++..+. ..
T Consensus 38 ddYeivr-k~GRGKY-------SEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 38 DDYEIVR-KVGRGKY-------SEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred chHHHHH-HHcCccH-------hhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 3455544 6899999 67999984 678899999964 6889999999997 99999999998754 45
Q ss_pred eeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC-CcEEEcccC
Q 005923 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN-LRAKITNFG 507 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~-~~~kl~DfG 507 (669)
..||+||+.+.+..... ..|+...+..++.+++.||.|+|+.| |+|||+||.|+++|.. -.++|+|+|
T Consensus 110 paLiFE~v~n~Dfk~ly--------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWG 178 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY--------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWG 178 (338)
T ss_pred chhHhhhhccccHHHHh--------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecc
Confidence 68999999998877665 34788889999999999999999999 9999999999999865 569999999
Q ss_pred CccccCCCccccCCcccceeeeccccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHH
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS 586 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 586 (669)
+|........ -+-.+.+..|.-||.+-. ..|....|+|||||++.+|+..++||..+.+... ..-.+.
T Consensus 179 LAEFYHp~~e---------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~D--QLVkIa 247 (338)
T KOG0668|consen 179 LAEFYHPGKE---------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD--QLVKIA 247 (338)
T ss_pred hHhhcCCCce---------eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHH--HHHHHH
Confidence 9988755432 122456677889999854 7789999999999999999999999984433221 122334
Q ss_pred HHHhhhhHHhhhh---cccCCccCC--------C--------CcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 587 RVLEESNVREKLR---GFIDPSLRN--------E--------YPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 587 ~~~~~~~~~~~l~---~~~d~~l~~--------~--------~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
+++......+-+. --+||.+.. . ...-...+..+++.+.|..|-.+|||+.|.+.+
T Consensus 248 kVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 248 KVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 4444333221111 112222111 0 001123568899999999999999999998864
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.94 E-value=8.2e-27 Score=217.39 Aligned_cols=187 Identities=24% Similarity=0.392 Sum_probs=153.5
Q ss_pred HHHhCCCCcccceeeE--EEEEEECCCeeEEEEeccc--------HHHHHHHHHhc-CCCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGS--VYRGSFKGDDAAVKVMKGD--------VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~--Vy~g~~~g~~vavK~~~~~--------~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e 434 (669)
++|.|+| |. +|+-..+|.-.|+|.++.. ...|+++..+- ..|.+|.++|....++..++.||
T Consensus 53 elGrGay-------G~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 53 ELGRGAY-------GVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhcCCcc-------chhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 4899999 65 4555668999999998753 34566655443 58999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
.|+- ||..|-++- ...+..+++.-+-+|+..+..||.|||++-+ ++|||+||+|||++.+|++|+||||++..+.+
T Consensus 126 ~M~t-Sldkfy~~v-~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~--vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d 201 (282)
T KOG0984|consen 126 LMDT-SLDKFYRKV-LKKGGTIPEDVLGKIAVSVVHALEFLHSKLS--VIHRDVKPSNILINYDGQVKICDFGISGYLVD 201 (282)
T ss_pred Hhhh-hHHHHHHHH-HhcCCcCchHHhhHhHHHHHHHHHHHHHHhh--hhhccCCcceEEEccCCcEEEcccccceeehh
Confidence 9975 888876543 2345678999999999999999999998753 99999999999999999999999999987754
Q ss_pred CccccCCcccceeeeccccccccccccccc----CCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIEN----GVITPKLDVFAFGVVVLELLSGREAVTG 572 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~s~~sDV~S~Gvvl~elltg~~p~~~ 572 (669)
+-. ..-..|-.-|||||.+.. ..|+-|+||||+|+.+.||.+++.|+..
T Consensus 202 SiA---------kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 202 SIA---------KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred hhH---------HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 321 122456778999999854 4689999999999999999999999974
No 397
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93 E-value=1.4e-26 Score=229.07 Aligned_cols=232 Identities=25% Similarity=0.336 Sum_probs=175.5
Q ss_pred CCCeeEEEEecc---------cHHHHHHHHHhcCCCCceeEeeEEEec------CceeEEEEecCCCCHHHHHhcCCCCC
Q 005923 388 KGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHE------GNTYLVYEFADNGALSDWLHSNRYQT 452 (669)
Q Consensus 388 ~g~~vavK~~~~---------~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~~lV~e~~~~gsL~~~l~~~~~~~ 452 (669)
.+..||+|++.. ...+|..++..++|+|+++++.+++-. .+.|+|||+|.. +|...++..
T Consensus 40 ~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~~e---- 114 (369)
T KOG0665|consen 40 LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDA-NLCQVILME---- 114 (369)
T ss_pred ccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhh-HHHHHHHHh----
Confidence 478899988743 345799999999999999999999743 367999999975 999988732
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeeccc
Q 005923 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVG 532 (669)
Q Consensus 453 ~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~g 532 (669)
++-..+..|..|++.|++|||+.+ |+||||||+||++..++.+||.|||+|+....+ ......+.
T Consensus 115 ---lDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~---------~~mtpyVv 179 (369)
T KOG0665|consen 115 ---LDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD---------FMMTPYVV 179 (369)
T ss_pred ---cchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhcccCcc---------cccCchhh
Confidence 677888999999999999999999 999999999999999999999999999975443 12344678
Q ss_pred ccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH--Hhh-------------
Q 005923 533 TYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV--REK------------- 597 (669)
Q Consensus 533 t~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------- 597 (669)
|..|.|||++.+..+.+.+||||.||++.||++|+..|.|.+.-+ .+..+...++.... ...
T Consensus 180 tRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~id---Q~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~ 256 (369)
T KOG0665|consen 180 TRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHID---QWNKIIEQLGTPDPSFMKQLQPTVRNYVENRP 256 (369)
T ss_pred eeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHH---HHHHHHHHhcCCCHHHHHHhhHHHHHHhhcCh
Confidence 899999999999889999999999999999999999988654321 11122222221110 000
Q ss_pred -------hhcccCCccCC--CCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 598 -------LRGFIDPSLRN--EYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 598 -------l~~~~d~~l~~--~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
-+.+-|..+.. +.+.-....+.+++.+||-.||++|.++++++.+
T Consensus 257 ~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 257 QYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00111111111 1111122347899999999999999999999875
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.2e-25 Score=232.96 Aligned_cols=122 Identities=25% Similarity=0.409 Sum_probs=103.2
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc------HHHHHHHHHhcC-----C---CCceeEeeEE
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD------VSSEINILKKIN-----H---SNIIRLSGFC 423 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~------~~~E~~~l~~l~-----H---~niv~l~g~~ 423 (669)
|.... ++|.|-| .+||++.. ..+.||+|+.|.. ...||++|++++ | ..||+|++.|
T Consensus 80 Y~v~r-KLGWGHF-------STVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F 151 (590)
T KOG1290|consen 80 YHVQR-KLGWGHF-------STVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF 151 (590)
T ss_pred EEEEE-ecccccc-------ceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence 44333 6999999 89999987 4678999999853 568999999984 3 3699999999
Q ss_pred Eec----CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeee
Q 005923 424 VHE----GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL 495 (669)
Q Consensus 424 ~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl 495 (669)
... .+.+||+|++ |.+|..++... ..+.++...+.+|++||+.||.|||... .|||.||||+|||+
T Consensus 152 khsGpNG~HVCMVfEvL-GdnLLklI~~s---~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 152 KHSGPNGQHVCMVFEVL-GDNLLKLIKYS---NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred eecCCCCcEEEEEehhh-hhHHHHHHHHh---CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 864 4789999999 56999999875 3467999999999999999999999764 39999999999999
No 399
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=5.6e-26 Score=268.49 Aligned_cols=205 Identities=17% Similarity=0.202 Sum_probs=141.8
Q ss_pred HHhcCC-CCceeEeeEE-------EecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 005923 408 LKKINH-SNIIRLSGFC-------VHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT 479 (669)
Q Consensus 408 l~~l~H-~niv~l~g~~-------~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~ 479 (669)
.+.++| .||++++++| .+.+..++++||+ +++|.++|+.. ...+++.+++.++.||+.||+|||+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~g 100 (793)
T PLN00181 26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP----DRSVDAFECFHVFRQIVEIVNAAHSQG 100 (793)
T ss_pred cchhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc----cccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 345566 6888898887 3334678889988 45999999743 245999999999999999999999999
Q ss_pred CCCeEeeCCCCCCeeecCC-------------------CcEEEcccCCccccCCCccc-------cCCcc-cceeeeccc
Q 005923 480 NPPYVHKNLKTSNILLDTN-------------------LRAKITNFGLARSAESDEHE-------QGGYG-LQLTRHVVG 532 (669)
Q Consensus 480 ~~~ivHrDik~~NILl~~~-------------------~~~kl~DfGla~~~~~~~~~-------~~~~~-~~~~~~~~g 532 (669)
|+||||||+||||+.. +.+|++|||+++........ ..+.. ........|
T Consensus 101 ---IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 177 (793)
T PLN00181 101 ---IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAME 177 (793)
T ss_pred ---eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCC
Confidence 9999999999999654 44556666666542110000 00000 000112457
Q ss_pred ccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcH
Q 005923 533 TYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPL 612 (669)
Q Consensus 533 t~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~ 612 (669)
|..|||||++.+..++.++|||||||+||||++|..|+..... . ...+ . ...+.+.. .
T Consensus 178 t~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----~-~~~~----~--------~~~~~~~~-----~ 235 (793)
T PLN00181 178 MSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----T-MSSL----R--------HRVLPPQI-----L 235 (793)
T ss_pred CcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----H-HHHH----H--------HhhcChhh-----h
Confidence 8899999999999999999999999999999998877542110 0 0000 0 00111111 1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 613 DLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 613 ~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.......+++.+||+.||.+||+|.|++++
T Consensus 236 ~~~~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 236 LNWPKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred hcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 112345688999999999999999999864
No 400
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.92 E-value=8.5e-26 Score=237.87 Aligned_cols=181 Identities=26% Similarity=0.409 Sum_probs=158.7
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc---------------HHHHHHHHHhcC---CCCceeEeeEEEe
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD---------------VSSEINILKKIN---HSNIIRLSGFCVH 425 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~---------------~~~E~~~l~~l~---H~niv~l~g~~~~ 425 (669)
++|.|.| |.|+.+.++ ...|+||.+.++ +-.|+.||..++ |+||++++.+|++
T Consensus 568 ~lG~GAy-------GkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 568 PLGEGAY-------GKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ecccccc-------ceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 4799999 999999985 557889987532 446999999997 9999999999999
Q ss_pred cCceeEEEEecCC-CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc
Q 005923 426 EGNTYLVYEFADN-GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504 (669)
Q Consensus 426 ~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 504 (669)
++.+||+||-.-- -+|.+++..+ ..+++....-|+.||+.|+++||+++ |||||||-+||.++.+|-+||+
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~k-----p~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~kli 712 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFK-----PRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLI 712 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhcc-----CccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEe
Confidence 9999999998644 4999999654 56999999999999999999999999 9999999999999999999999
Q ss_pred ccCCccccCCCccccCCcccceeeecccccccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCC
Q 005923 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVI-TPKLDVFAFGVVVLELLSGREAVT 571 (669)
Q Consensus 505 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-s~~sDV~S~Gvvl~elltg~~p~~ 571 (669)
|||.+.....+. ....+||..|.|||++.+..| ...-|||++|++||-++....||.
T Consensus 713 dfgsaa~~ksgp----------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 713 DFGSAAYTKSGP----------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eccchhhhcCCC----------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999998766543 234689999999999999887 456899999999999998888875
No 401
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=7.3e-25 Score=210.87 Aligned_cols=169 Identities=20% Similarity=0.247 Sum_probs=128.5
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccc
Q 005923 439 GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518 (669)
Q Consensus 439 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~ 518 (669)
|+|.++++.. ...++|.+++.|+.|++.||+|||+.+ ||+|||++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~-- 63 (176)
T smart00750 1 VSLADILEVR----GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ-- 63 (176)
T ss_pred CcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc--
Confidence 7899999754 246999999999999999999999876 999999999999999 99988654321
Q ss_pred cCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhh
Q 005923 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKL 598 (669)
Q Consensus 519 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 598 (669)
..||..|||||++.+..++.++|||||||++|||++|+.||....... . ........ .
T Consensus 64 -----------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~---~~~~~~~~------~ 121 (176)
T smart00750 64 -----------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS--A---ILEILLNG------M 121 (176)
T ss_pred -----------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc--H---HHHHHHHH------h
Confidence 257899999999999999999999999999999999999987533211 0 01111100 0
Q ss_pred hcccCCccCCCCcHHHHH--HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhc
Q 005923 599 RGFIDPSLRNEYPLDLAF--SMAQLAKNCTAHDLNARPSISEVFVTLSKIWS 648 (669)
Q Consensus 599 ~~~~d~~l~~~~~~~~~~--~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 648 (669)
... ++.. ...+..... .+.+++.+||+.||.+||++.|+++++..+..
T Consensus 122 ~~~-~~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 122 PAD-DPRD-RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred ccC-Cccc-cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 000 0000 011223333 68999999999999999999999999987654
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=5.1e-24 Score=212.09 Aligned_cols=186 Identities=38% Similarity=0.585 Sum_probs=161.8
Q ss_pred HHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc--------cHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEe
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~--------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 435 (669)
.++.|.| |.||++... ++.+++|.... .+.+|++.+++++|+|++++++++......++++||
T Consensus 6 ~i~~g~~-------~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 6 KLGEGAF-------GKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred EeecCCC-------eEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 3788889 999999985 58899998853 456799999999999999999999988999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+++++|.+++...+ ..+++..+..++.+++.++.|||+.+ ++|+||++.||+++.++.++|+|||.+......
T Consensus 79 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 79 CEGGDLFDYLRKKG----GKLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRD 151 (225)
T ss_pred cCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence 99999999997642 11889999999999999999999998 999999999999999999999999999876543
Q ss_pred ccccCCcccceeeeccccccccccccc-ccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYI-ENGVITPKLDVFAFGVVVLELLSGREAVTG 572 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l-~~~~~s~~sDV~S~Gvvl~elltg~~p~~~ 572 (669)
.. .......++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 152 ~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 152 LA-------ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cc-------ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 20 012334677889999998 777888899999999999999999999976
No 403
>PRK06347 autolysin; Reviewed
Probab=99.90 E-value=9e-24 Score=233.53 Aligned_cols=171 Identities=16% Similarity=0.156 Sum_probs=134.5
Q ss_pred eeeeecCCCCCCHHHHHHhhCCCChHHHhhhcCCCCCCCCCCCCCcEEEeeecccCCCC--------CC----cceeeee
Q 005923 61 YLTFRSNPSYNTPVTIDYLFKTSHPNLIASINSITNVTATLPTDTPVLIPVNCSCSGGG--------DG----DYYQFNT 128 (669)
Q Consensus 61 ~~~y~~~~~g~tl~~Ia~~~~~~~~~~i~~~N~~~~~~~~l~~gq~l~IP~~c~c~~~~--------~~----~~~~~~~ 128 (669)
+..|+|++ ||||+.||+.|| +++.+|+++|++. .+.|.+||.|.||..-.-.... .. .......
T Consensus 405 ~~~ytVk~-GDTL~sIA~kyg-VSv~~L~~~N~l~--s~~L~~Gq~L~IP~~~~~~~~t~~~s~~~~~~k~~s~~~~~~~ 480 (592)
T PRK06347 405 AKVYTVVK-GDSLWRIANNNK-VTIANLKSWNNLK--SDFIYPGQKLKVSAGSTSNTNTSKPSTNTNTSKPSTNTNTNAK 480 (592)
T ss_pred ceeEEecC-CCCHHHHHHHhC-CCHHHHHHHhCCC--cceeccCcEEEEecCCcccccccccccccccccccccccccce
Confidence 56799998 999999999999 9999999999984 5689999999999753210000 00 0011225
Q ss_pred EEEEecCCcchhhhHhhhhcCchhHHHHHhcCCCCCCCCCCCceEEEeeecCCCCccc-----ccCCceEEEEEEcCCCC
Q 005923 129 TYTIQNHVETYLSVANNTYQGLTTCQAMMSQNPVDSRNLTVGLDLFVPLRCACPSRDQ-----AASGFNHLLTYMVTWGD 203 (669)
Q Consensus 129 ~y~V~~~gdT~~~IA~~~~~~lt~~~~l~~~N~~~~~~l~~G~~L~ip~~c~c~~~~~-----~~~~~~~~~tY~v~~GD 203 (669)
.|+|+ +|||||+|| ++|+ +++++|+++|++.++.|++||+|.||....-..... .........+|+|++||
T Consensus 481 ~YtVk-~GDTL~sIA-kkyg--VSv~~L~~~N~l~s~~L~~GQ~L~Ip~~~~~s~~~t~~~s~~~~~~~~~~~Y~Vk~GD 556 (592)
T PRK06347 481 VYTVA-KGDSLWRIA-NNNK--VTIANLKSWNNLKSDFIYPGQKLKVSAGSTTNNTNTAKPSTNKPSNSTVKTYTVKKGD 556 (592)
T ss_pred eeeec-CCCCHHHHH-HHHC--CCHHHHHHhcCCCcccccCCcEEEEecCcccccccccCCccCCccCccceeeecCCCC
Confidence 79999 999999999 7888 999999999998877999999999998643211000 00011124689999999
Q ss_pred CHHHHHHHhCCCHHhHHHhcCCCCCCCCCCCcccccc
Q 005923 204 SISAIAQLFNVDERSVLDANKLSQDDLIFPFTPILVP 240 (669)
Q Consensus 204 tl~~Ia~~f~v~~~~l~~~N~l~~~~~l~p~~~l~iP 240 (669)
|||+||+||||++++|++||+|. .+.|+|||.|.|+
T Consensus 557 TL~sIA~KygvSv~~L~~~N~L~-~~~L~~GQ~L~I~ 592 (592)
T PRK06347 557 SLWAISRQYKTTVDNIKAWNKLT-SNMIHVGQKLTIK 592 (592)
T ss_pred cHHHHHHHhCCCHHHHHHhcCCC-cccCCCCCEEecC
Confidence 99999999999999999999996 5679999999875
No 404
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.90 E-value=5.5e-25 Score=235.36 Aligned_cols=236 Identities=24% Similarity=0.439 Sum_probs=189.5
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEeccc-------HHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGD-------VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFA 436 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~~-------~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 436 (669)
++|.|.| |.|||++. .++.+|||++|-+ +++|+-+++.-+|||||.++|.+...+..++.|||+
T Consensus 22 rvgsgTy-------gdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 22 RVGSGTY-------GDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred eecCCcc-------cchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 4899999 99999987 5889999998742 568999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCc
Q 005923 437 DNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516 (669)
Q Consensus 437 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~ 516 (669)
.+|+|.+.-+. .+.|++.++..++++.+.||+|||+.+ =+|||||-.|||+++.+.+|++|||.+..+...
T Consensus 95 gggslQdiy~~-----TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitat- 165 (829)
T KOG0576|consen 95 GGGSLQDIYHV-----TGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITAT- 165 (829)
T ss_pred CCCcccceeee-----cccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhh-
Confidence 99999998764 367999999999999999999999999 899999999999999999999999998765432
Q ss_pred cccCCcccceeeeccccccccccccc---ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhh
Q 005923 517 HEQGGYGLQLTRHVVGTYGYMAPEYI---ENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593 (669)
Q Consensus 517 ~~~~~~~~~~~~~~~gt~~y~aPE~l---~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (669)
........||+.|||||+- ..+.|..++|||+.|+...|+---+.|...-.... .++ +
T Consensus 166 -------i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr--~l~-----L----- 226 (829)
T KOG0576|consen 166 -------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR--ALF-----L----- 226 (829)
T ss_pred -------hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH--HHH-----H-----
Confidence 2234557899999999986 45789999999999999999977776655322110 000 0
Q ss_pred HHhhhhcccC-CccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 594 VREKLRGFID-PSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 594 ~~~~l~~~~d-~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
.-+...+ +.+++ +..-...+-++++.|+..+|++||+++.++.
T Consensus 227 ---mTkS~~qpp~lkD--k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 227 ---MTKSGFQPPTLKD--KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ---hhccCCCCCcccC--CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1111122 22221 2233446789999999999999999986543
No 405
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.7e-24 Score=209.14 Aligned_cols=230 Identities=23% Similarity=0.406 Sum_probs=185.6
Q ss_pred eEEEEEEECCCeeEEEEec---------ccHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCC
Q 005923 380 GSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRY 450 (669)
Q Consensus 380 G~Vy~g~~~g~~vavK~~~---------~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~ 450 (669)
|..|+|+|.|..+++|+++ .+|..|.-.|+-+.||||+.++|.|....+..++..||+.|||...||..
T Consensus 204 gelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~-- 281 (448)
T KOG0195|consen 204 GELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQ-- 281 (448)
T ss_pred cccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcC--
Confidence 8999999999999888874 46888999999999999999999999999999999999999999999874
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEc--ccCCccccCCCccccCCcccceee
Q 005923 451 QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT--NFGLARSAESDEHEQGGYGLQLTR 528 (669)
Q Consensus 451 ~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~--DfGla~~~~~~~~~~~~~~~~~~~ 528 (669)
..-..+-.+.++++.++|+||+|||+.. |-|.---|.+..+++|++.+++|+ |--++. .. .
T Consensus 282 -t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsf--qe-------------~ 344 (448)
T KOG0195|consen 282 -TSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSF--QE-------------V 344 (448)
T ss_pred -ccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeee--ec-------------c
Confidence 3445778899999999999999999975 334455789999999999998875 322211 11 0
Q ss_pred ecccccccccccccccCCC---CchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCc
Q 005923 529 HVVGTYGYMAPEYIENGVI---TPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPS 605 (669)
Q Consensus 529 ~~~gt~~y~aPE~l~~~~~---s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 605 (669)
...-.+.||+||.+....- -.++|+|||.+++|||.|...||..-.+.+..+ ++.-++
T Consensus 345 gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm-------------------kialeg 405 (448)
T KOG0195|consen 345 GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM-------------------KIALEG 405 (448)
T ss_pred ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh-------------------hhhhcc
Confidence 1233578999999976443 347999999999999999999998644432211 111234
Q ss_pred cCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 606 LRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 606 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
++...|......+.+||.-|+..||.+||.++.|+-.|+++.
T Consensus 406 lrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 406 LRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 566677778889999999999999999999999999999875
No 406
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.1e-23 Score=203.89 Aligned_cols=244 Identities=20% Similarity=0.336 Sum_probs=172.1
Q ss_pred cccchhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc------cHHHHHHHHHhc-CCCCceeEeeE-EEecC
Q 005923 358 TLYKFQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG------DVSSEINILKKI-NHSNIIRLSGF-CVHEG 427 (669)
Q Consensus 358 ~~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~------~~~~E~~~l~~l-~H~niv~l~g~-~~~~~ 427 (669)
..|.+.. .+|+|.| |.+.++..+ .+.+++|.+.. +|.+|..---.| .|.||+.-+++ |...+
T Consensus 24 d~y~I~k-~lgeG~F-------gkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d 95 (378)
T KOG1345|consen 24 DVYTINK-QLGEGRF-------GKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD 95 (378)
T ss_pred hhhhHHH-Hhcccce-------eeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCc
Confidence 3466555 4999999 999999986 45789998865 455554433333 58999988765 45566
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeee-cC-CCcEEEcc
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL-DT-NLRAKITN 505 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl-~~-~~~~kl~D 505 (669)
.+.+++||++.|+|..-+.. ..+-+..-.+++.|++.|+.|||+++ +||||||.+|||| +. ..++|+||
T Consensus 96 ~YvF~qE~aP~gdL~snv~~------~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcD 166 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNVEA------AGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCD 166 (378)
T ss_pred eEEEeeccCccchhhhhcCc------ccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeee
Confidence 78899999999999987754 34778888999999999999999999 9999999999999 33 45899999
Q ss_pred cCCccccCCCccccCCcccceeeeccccccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCchh-HHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-----GVITPKLDVFAFGVVVLELLSGREAVTGDQNC-EAE 579 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~-~~~ 579 (669)
||+.+..+.- .....-+..|.+||.... -...+.+|+|.||++++.++||+.|+...... ..+
T Consensus 167 FG~t~k~g~t-----------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y 235 (378)
T KOG1345|consen 167 FGLTRKVGTT-----------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPY 235 (378)
T ss_pred cccccccCce-----------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchH
Confidence 9999876432 223344567999998753 23467899999999999999999999832211 111
Q ss_pred HHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
+.+ . . .... ..+.+...+ ..+...+.++.++-+..++++|=-..++.+.-
T Consensus 236 ~~~--~-~---------w~~r-k~~~~P~~F-~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 236 WEW--E-Q---------WLKR-KNPALPKKF-NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred HHH--H-H---------Hhcc-cCccCchhh-cccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 111 0 0 0101 111111111 12334577888999999999995545544443
No 407
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.90 E-value=1e-23 Score=216.46 Aligned_cols=259 Identities=24% Similarity=0.348 Sum_probs=186.8
Q ss_pred HHHhCCCCcccceeeEEEEEEE-----CCCeeEEEEec-----ccHHHHHHHHHhcC-CCCceeEeeEEEecCceeEEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF-----KGDDAAVKVMK-----GDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYE 434 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~-----~g~~vavK~~~-----~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e 434 (669)
++|.|.| ++||++.+ .+..||+|.+. ..+..|+++|..+. +.||+++.+++..++...+|+|
T Consensus 43 kigeGsF-------ssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp 115 (418)
T KOG1167|consen 43 KIGEGSF-------SSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLP 115 (418)
T ss_pred cccccch-------hhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEec
Confidence 5999999 89999976 35679999885 35789999999995 8999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC-CcEEEcccCCccccC
Q 005923 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN-LRAKITNFGLARSAE 513 (669)
Q Consensus 435 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~-~~~kl~DfGla~~~~ 513 (669)
|+++-...+++.. ++...+..+++.++.||.|+|.+| ||||||||+|+|.+.. ++-.|.|||+|....
T Consensus 116 ~~~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d 184 (418)
T KOG1167|consen 116 YFEHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYD 184 (418)
T ss_pred ccCccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhHHHHH
Confidence 9999999999863 778899999999999999999999 9999999999999864 678899999997211
Q ss_pred CCc------c-------c----------------cC-------Ccccceeeeccccccccccccccc-CCCCchhhHHHH
Q 005923 514 SDE------H-------E----------------QG-------GYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAF 556 (669)
Q Consensus 514 ~~~------~-------~----------------~~-------~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~~sDV~S~ 556 (669)
... . . .. ...........||++|.|||++.. ...++++||||-
T Consensus 185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~ 264 (418)
T KOG1167|consen 185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA 264 (418)
T ss_pred hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence 000 0 0 00 000011123579999999999865 667999999999
Q ss_pred HHHHHHHHcCCCCCCCCch-hHHHHHHH------HHHHH---Hhh------hh---HHhh---hhcc-cCCccC------
Q 005923 557 GVVVLELLSGREAVTGDQN-CEAELLYA------SISRV---LEE------SN---VREK---LRGF-IDPSLR------ 607 (669)
Q Consensus 557 Gvvl~elltg~~p~~~~~~-~~~~~~~~------~~~~~---~~~------~~---~~~~---l~~~-~d~~l~------ 607 (669)
||+++-+++++.||....+ .++-.... .+.+. ... .. ..+. .+.+ +.....
T Consensus 265 GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~ 344 (418)
T KOG1167|consen 265 GVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNT 344 (418)
T ss_pred cceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccce
Confidence 9999999999999984322 11111110 11100 000 00 0000 1111 010011
Q ss_pred --CCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 608 --NEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 608 --~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
....+..+..+++|+.+|++.||.+|.|++|.+++
T Consensus 345 ~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 345 EREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred eeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 11112233468999999999999999999998865
No 408
>PRK06347 autolysin; Reviewed
Probab=99.89 E-value=7.5e-23 Score=226.22 Aligned_cols=175 Identities=18% Similarity=0.164 Sum_probs=137.2
Q ss_pred eeeeeecCCCCCCHHHHHHhhCCCChHHHhhhcCCCCCCCCCCCCCcEEEeeecccCC------CCC-------Ccceee
Q 005923 60 AYLTFRSNPSYNTPVTIDYLFKTSHPNLIASINSITNVTATLPTDTPVLIPVNCSCSG------GGD-------GDYYQF 126 (669)
Q Consensus 60 ~~~~y~~~~~g~tl~~Ia~~~~~~~~~~i~~~N~~~~~~~~l~~gq~l~IP~~c~c~~------~~~-------~~~~~~ 126 (669)
.+..|+|+. ||||+.||+.|| +++++|+++|++ ..+.|.+||.|+||..-.-.. ... ......
T Consensus 329 ~~~~Y~V~s-GDTL~~IA~ryg-vSv~eL~~~N~l--~~d~L~~Gq~L~VP~~~~~~~~~t~~~~~~~~~~~~~~~~~~~ 404 (592)
T PRK06347 329 NAKIYTVVK-GDSLWRIANNHK-VTVANLKAWNNL--KSDFIYPGQKLKVSAGSTTSDTNTSKPSTGTSTSKPSTGTSTN 404 (592)
T ss_pred CceEEEeCC-CCCHHHHHHHhC-CCHHHHHHHhCC--CccccccCcEEEEeccccccccccccccccccccccccccccC
Confidence 577899998 999999999999 999999999998 467999999999997421100 000 000112
Q ss_pred eeEEEEecCCcchhhhHhhhhcCchhHHHHHhcCCCCCCCCCCCceEEEeeecCC------CCccc-----ccCCceEEE
Q 005923 127 NTTYTIQNHVETYLSVANNTYQGLTTCQAMMSQNPVDSRNLTVGLDLFVPLRCAC------PSRDQ-----AASGFNHLL 195 (669)
Q Consensus 127 ~~~y~V~~~gdT~~~IA~~~~~~lt~~~~l~~~N~~~~~~l~~G~~L~ip~~c~c------~~~~~-----~~~~~~~~~ 195 (669)
...|+|+ +|||++.|| ++|+ ++..+|+++|++..+.|.+||.|.||..-.- +.... .+....-..
T Consensus 405 ~~~ytVk-~GDTL~sIA-~kyg--VSv~~L~~~N~l~s~~L~~Gq~L~IP~~~~~~~~t~~~s~~~~~~k~~s~~~~~~~ 480 (592)
T PRK06347 405 AKVYTVV-KGDSLWRIA-NNNK--VTIANLKSWNNLKSDFIYPGQKLKVSAGSTSNTNTSKPSTNTNTSKPSTNTNTNAK 480 (592)
T ss_pred ceeEEec-CCCCHHHHH-HHhC--CCHHHHHHHhCCCcceeccCcEEEEecCCcccccccccccccccccccccccccce
Confidence 3579999 999999999 7888 8899999999987778999999999974211 10000 000111235
Q ss_pred EEEcCCCCCHHHHHHHhCCCHHhHHHhcCCCCCCCCCCCcccccccCC
Q 005923 196 TYMVTWGDSISAIAQLFNVDERSVLDANKLSQDDLIFPFTPILVPLKT 243 (669)
Q Consensus 196 tY~v~~GDtl~~Ia~~f~v~~~~l~~~N~l~~~~~l~p~~~l~iP~~~ 243 (669)
+|+|+.|||||+||+||||++++|++||++. .+.|+|||.|.||...
T Consensus 481 ~YtVk~GDTL~sIAkkygVSv~~L~~~N~l~-s~~L~~GQ~L~Ip~~~ 527 (592)
T PRK06347 481 VYTVAKGDSLWRIANNNKVTIANLKSWNNLK-SDFIYPGQKLKVSAGS 527 (592)
T ss_pred eeeecCCCCHHHHHHHHCCCHHHHHHhcCCC-cccccCCcEEEEecCc
Confidence 8999999999999999999999999999996 4689999999999865
No 409
>PRK10783 mltD membrane-bound lytic murein transglycosylase D; Provisional
Probab=99.85 E-value=1.2e-20 Score=205.21 Aligned_cols=168 Identities=15% Similarity=0.162 Sum_probs=128.2
Q ss_pred eecCCCCCCHHHHHHhhCCCChHHHhhhcCCCCCCCCCC-CC-CcEEEeeecccC-------C----CCCC----cceee
Q 005923 64 FRSNPSYNTPVTIDYLFKTSHPNLIASINSITNVTATLP-TD-TPVLIPVNCSCS-------G----GGDG----DYYQF 126 (669)
Q Consensus 64 y~~~~~g~tl~~Ia~~~~~~~~~~i~~~N~~~~~~~~l~-~g-q~l~IP~~c~c~-------~----~~~~----~~~~~ 126 (669)
..+.. +.+|..||+++| ++.++|+++|... +...+. .| +.|+||....-. + ..++ .....
T Consensus 266 V~v~~-~i~L~~iA~~~g-vs~~eL~~LNP~~-kr~~t~p~g~~~llvP~~~~~~f~~~l~~~~~~~~~p~~~~~~~~~~ 342 (456)
T PRK10783 266 VDLGQ-QIELAQAAEMAG-MSLTKLKTFNAGY-KRSTTAPSGPHYIMVPKKHADQLRESLASGEIAAVQSTLVADNTPLN 342 (456)
T ss_pred EecCC-CcCHHHHHHHcC-CCHHHHHHhCccc-cCCCcCCCCCeEEEecCchhhHHHHhhhhhhhhhcccccccccCcCC
Confidence 34433 779999999999 9999999999543 334333 34 678888753210 0 0000 00012
Q ss_pred eeEEEEecCCcchhhhHhhhhcCchhHHHHHhcCCCCCCCCCCCceEEEeeecCCCCcccccCCceEEEEEEcCCCCCHH
Q 005923 127 NTTYTIQNHVETYLSVANNTYQGLTTCQAMMSQNPVDSRNLTVGLDLFVPLRCACPSRDQAASGFNHLLTYMVTWGDSIS 206 (669)
Q Consensus 127 ~~~y~V~~~gdT~~~IA~~~~~~lt~~~~l~~~N~~~~~~l~~G~~L~ip~~c~c~~~~~~~~~~~~~~tY~v~~GDtl~ 206 (669)
..+|+|+ +|||+++|| ++|+ ++.++|+++|++..+.|.+||+|.||..|.|.. .......++|+|++||||+
T Consensus 343 ~~~y~Vk-~GDTL~sIA-~r~g--vs~~~L~~~N~l~~~~L~~Gq~L~Ip~~~~~~~----~~~~~~~~~Y~Vr~GDTL~ 414 (456)
T PRK10783 343 SRSYKVR-SGDTLSGIA-SRLN--VSTKDLQQWNNLRGSKLKVGQTLTIGAGSSAQR----LANNSDSITYRVRKGDSLS 414 (456)
T ss_pred ceEEEEC-CCCcHHHHH-HHHC--cCHHHHHHHcCCCcccCCCCCEEEecCCccccc----ccccccceeEEeCCCCCHH
Confidence 3579999 999999999 6776 778999999998777899999999998766532 1122335799999999999
Q ss_pred HHHHHhCCCHHhHHHhcCCCCCCCCCCCcccccccCC
Q 005923 207 AIAQLFNVDERSVLDANKLSQDDLIFPFTPILVPLKT 243 (669)
Q Consensus 207 ~Ia~~f~v~~~~l~~~N~l~~~~~l~p~~~l~iP~~~ 243 (669)
+||+||||++++|++||++..+ .|+|||+|.|++..
T Consensus 415 sIA~kygVtv~~L~~~N~l~~~-~L~pGq~L~l~v~~ 450 (456)
T PRK10783 415 SIAKRHGVNIKDVMRWNSDTAK-NLQPGDKLTLFVKN 450 (456)
T ss_pred HHHHHhCCCHHHHHHhcCCCCC-cCCCCCEEEEecCC
Confidence 9999999999999999998655 99999999998765
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=1.5e-19 Score=191.30 Aligned_cols=260 Identities=22% Similarity=0.275 Sum_probs=192.3
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEECCC---eeEEEEecc-------cHHHHHHHHHhcCC----CCceeEeeEE-
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFKGD---DAAVKVMKG-------DVSSEINILKKINH----SNIIRLSGFC- 423 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g~---~vavK~~~~-------~~~~E~~~l~~l~H----~niv~l~g~~- 423 (669)
.|++.. ++|.|.| |.||.+..... .+|+|.... .+..|..++..+.+ +++..+++..
T Consensus 19 ~~~i~~-~iG~G~f-------G~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~ 90 (322)
T KOG1164|consen 19 RYKLGK-KIGEGGF-------GAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR 90 (322)
T ss_pred ceEEee-eccccCC-------ceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc
Confidence 455555 5999999 99999998543 588888753 36789999999973 5888888888
Q ss_pred EecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC-----
Q 005923 424 VHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN----- 498 (669)
Q Consensus 424 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~----- 498 (669)
..++..++||+.+ |.+|.++.... ..+.++....++|+.|++.+|++||+.+ ++||||||.|+++...
T Consensus 91 ~~~~~~~iVM~l~-G~sL~dl~~~~---~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~ 163 (322)
T KOG1164|consen 91 STEDFNFIVMSLL-GPSLEDLRKRN---PPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEV 163 (322)
T ss_pred CCCceeEEEEecc-CccHHHHHHhC---CCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCccc
Confidence 4677889999988 67999988654 2467999999999999999999999999 9999999999999764
Q ss_pred CcEEEcccCCccccC--CCccccCCcccce-eeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCch
Q 005923 499 LRAKITNFGLARSAE--SDEHEQGGYGLQL-TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQN 575 (669)
Q Consensus 499 ~~~kl~DfGla~~~~--~~~~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~ 575 (669)
..+.|.|||+++... ....... ..... .....||.+|+++.+..+...+.+.|+||++.++.|++.|..|+.+...
T Consensus 164 ~~~~llDfGlar~~~~~~~~~~~~-~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~ 242 (322)
T KOG1164|consen 164 RTLYLLDFGLARRFKYVGDSGGNL-RPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM 242 (322)
T ss_pred ceEEEEecCCCccccccCCCCccc-ccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence 468999999999332 2211100 00011 1235699999999999999999999999999999999999999875432
Q ss_pred hHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCC
Q 005923 576 CEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSS 650 (669)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 650 (669)
..... ....... ...... .....+.++.+++..+-..+..++|....+...|+.+....
T Consensus 243 ~~~~~---~~~~~~~--------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 243 TDLKS---KFEKDPR--------KLLTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred cchHH---HHHHHhh--------hhcccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 21111 1100000 000110 12223345667777777799999999999999998887653
No 411
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.83 E-value=1.6e-19 Score=179.78 Aligned_cols=254 Identities=18% Similarity=0.240 Sum_probs=196.1
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEec-----ccHHHHHHHHHhcC-CCCceeEeeEEEecCceeEEEEecC
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMK-----GDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFAD 437 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~-----~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~ 437 (669)
+||+|+| |..+.|+. +++.||||... ..+..|.+..+.|. .++|...+-+-.++.+-.||+|.+
T Consensus 35 KIGeGsF-------G~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 35 KIGEGSF-------GVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred ccccCcc-------eeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 7999999 99999975 89999999863 24788999999885 689999888877788889999998
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC-----CcEEEcccCCcccc
Q 005923 438 NGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN-----LRAKITNFGLARSA 512 (669)
Q Consensus 438 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~-----~~~kl~DfGla~~~ 512 (669)
|.||.|++.-. ++.++.+.+..||.|++.-++|+|++. +|.|||||+|+||..- ..+.|+|||+|+..
T Consensus 107 GPSLEDLFD~C----gR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 107 GPSLEDLFDLC----GRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred CcCHHHHHHHh----cCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 67999988643 467999999999999999999999999 9999999999999643 45889999999987
Q ss_pred CCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhh
Q 005923 513 ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEES 592 (669)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (669)
.+.....+. ...-.....||.+||+--...+...+.+.|+-|+|.|++..|-|..||.|-........++.|..-....
T Consensus 180 rDp~TkqHI-PYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T 258 (449)
T KOG1165|consen 180 RDPKTKQHI-PYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRST 258 (449)
T ss_pred cCccccccC-ccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccC
Confidence 655443331 1233445789999999999999999999999999999999999999999754332233333332111111
Q ss_pred hHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhc
Q 005923 593 NVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWS 648 (669)
Q Consensus 593 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 648 (669)
.+ . ...+..+.++...++..=..+-.+-|..+-+...+..++.
T Consensus 259 ~i----~---------~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 259 PI----E---------VLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred CH----H---------HHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 11 1 1112345567777777777888888998877776666653
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=4.2e-20 Score=195.87 Aligned_cols=160 Identities=21% Similarity=0.214 Sum_probs=120.7
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEE---CCCeeEEEEecc------------cHHHHHHHHHhcCCCCceeEeeEE
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSF---KGDDAAVKVMKG------------DVSSEINILKKINHSNIIRLSGFC 423 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~---~g~~vavK~~~~------------~~~~E~~~l~~l~H~niv~l~g~~ 423 (669)
.|.+.+. +|.|.| |+||+|.. .+..+|||+... .+.+|+++|++++|+|++..+..
T Consensus 19 ~Y~~~~~-IG~G~f-------g~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~- 89 (365)
T PRK09188 19 RFVETAV-LKRDVF-------STVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA- 89 (365)
T ss_pred CceEccE-EeecCc-------EEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE-
Confidence 4555553 899999 99999987 356679998531 26789999999999999853322
Q ss_pred EecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCC-CCCCeeecCCCcEE
Q 005923 424 VHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNL-KTSNILLDTNLRAK 502 (669)
Q Consensus 424 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDi-k~~NILl~~~~~~k 502 (669)
.+..+|||||+++++|.. +... . ...++.+++.+|.|||+.+ |+|||| ||+|||++.++.+|
T Consensus 90 --~~~~~LVmE~~~G~~L~~-~~~~-----~------~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ik 152 (365)
T PRK09188 90 --TGKDGLVRGWTEGVPLHL-ARPH-----G------DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAA 152 (365)
T ss_pred --cCCcEEEEEccCCCCHHH-hCcc-----c------hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEE
Confidence 256899999999999963 2110 1 1467889999999999999 999999 99999999999999
Q ss_pred EcccCCccccCCCccccCCcccceeeeccccccccccccccc
Q 005923 503 ITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN 544 (669)
Q Consensus 503 l~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~ 544 (669)
|+|||+++.................+...++..|+|||.+.-
T Consensus 153 LiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 153 VIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred EEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 999999997754321110000011245778889999999854
No 413
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.81 E-value=1.8e-18 Score=180.26 Aligned_cols=252 Identities=31% Similarity=0.456 Sum_probs=188.3
Q ss_pred HHhCCCCcccceeeEEEEEEECCCeeEEEEecc----------cHHHHHHHHHhcCCC-CceeEeeEEEecCceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG----------DVSSEINILKKINHS-NIIRLSGFCVHEGNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~----------~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lV~e~ 435 (669)
+|.|.| |.||++... ..+++|.+.. .+.+|+.++..+.|+ +++++..++......++++++
T Consensus 8 l~~g~~-------~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 8 LGEGSF-------GEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ecCCCC-------eEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 678999 999999988 7788888753 366889999999988 799999999777778999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC-cEEEcccCCccccCC
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL-RAKITNFGLARSAES 514 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~-~~kl~DfGla~~~~~ 514 (669)
+.+++|.+++...... ..+.......++.|++.++.|+|+.+ ++|||+||+||+++... .++++|||+++....
T Consensus 80 ~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 80 VDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred CCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence 9999999777654211 36889999999999999999999999 99999999999999988 799999999986544
Q ss_pred CccccCCcccceeeeccccccccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCchh-HHHHHHHHHHHHHh
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIEN---GVITPKLDVFAFGVVVLELLSGREAVTGDQNC-EAELLYASISRVLE 590 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~ 590 (669)
....... ........|+..|++||.+.+ ...+...|+|++|++++++++|..|+...... ..... ...+.
T Consensus 155 ~~~~~~~--~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~----~~~~~ 228 (384)
T COG0515 155 PGSTSSI--PALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQT----LKIIL 228 (384)
T ss_pred CCccccc--cccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHH----HHHHH
Confidence 3211000 012456789999999999988 68899999999999999999999997654321 00000 00110
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 642 (669)
.. .............+......+.+++..|+..+|..|.++.+....
T Consensus 229 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 229 EL-----PTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred hc-----CCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00 000000011111112223567899999999999999999988875
No 414
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.81 E-value=3.7e-19 Score=170.01 Aligned_cols=253 Identities=19% Similarity=0.295 Sum_probs=193.3
Q ss_pred HHHhCCCCcccceeeEEEEEEE--CCCeeEEEEecc-----cHHHHHHHHHhcCC-CCceeEeeEEEecCceeEEEEecC
Q 005923 366 KIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKG-----DVSSEINILKKINH-SNIIRLSGFCVHEGNTYLVYEFAD 437 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~--~g~~vavK~~~~-----~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~e~~~ 437 (669)
++|.|+| |.+|.|.. +|+.||||..+. .+..|..+...++| ..|..+..|..++..-.||||.+
T Consensus 22 kiGsGSF-------GdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL- 93 (341)
T KOG1163|consen 22 KIGSGSF-------GDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL- 93 (341)
T ss_pred eecCCch-------hheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-
Confidence 5999999 99999987 799999999865 46789999999975 67788888888888999999998
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC---CcEEEcccCCccccCC
Q 005923 438 NGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN---LRAKITNFGLARSAES 514 (669)
Q Consensus 438 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~---~~~kl~DfGla~~~~~ 514 (669)
|.||.+.+.-. .+.++-+.++.++-|++.-++|+|.++ ++||||||+|+|..-+ ..+.++|||+|+...+
T Consensus 94 GPsLEdLfnfC----~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 94 GPSLEDLFNFC----SRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred CccHHHHHHHH----hhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 67999988643 456899999999999999999999999 9999999999998644 4578999999998755
Q ss_pred CccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhH
Q 005923 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594 (669)
Q Consensus 515 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (669)
.....+ -.....+...||.+|.+--...+-..+.+.|+-|+|.||..+.-|..||.+-........++.+ .+..
T Consensus 167 ~~t~~H-Ipyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI---~EkK-- 240 (341)
T KOG1163|consen 167 IRTRQH-IPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKI---SEKK-- 240 (341)
T ss_pred cccccc-CccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHH---HHhh--
Confidence 433322 1123345678999999999988888899999999999999999999999976543222222222 1110
Q ss_pred HhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 595 REKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 595 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
+.. ..+......+.++.-.+..|=..--++-|...-+-+.+.-+.
T Consensus 241 ---~s~-----~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLf 285 (341)
T KOG1163|consen 241 ---MST-----PIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILF 285 (341)
T ss_pred ---cCC-----CHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence 000 001111233456777888888888888898877666655443
No 415
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=1.7e-20 Score=210.91 Aligned_cols=246 Identities=23% Similarity=0.311 Sum_probs=180.8
Q ss_pred ccchhHHHHHhCCCCcccceeeEEEEEEECCCeeEEEEecc--------cHHH---HHHHHHhcCCCCceeEeeEEEecC
Q 005923 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG--------DVSS---EINILKKINHSNIIRLSGFCVHEG 427 (669)
Q Consensus 359 ~~~~~~l~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~--------~~~~---E~~~l~~l~H~niv~l~g~~~~~~ 427 (669)
.+.+.+ .+|.++| -+|.+++.+...|+||++-. .+.+ |++ ...++|||.+.+.-+-..+.
T Consensus 24 e~~~~~-~LGstRF-------lKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~k 94 (1431)
T KOG1240|consen 24 ECHYVE-NLGSTRF-------LKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDK 94 (1431)
T ss_pred ceeeec-ccCchhh-------hhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhH
Confidence 344545 4899999 78999998777799999832 2333 444 45568999999998877777
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
..|||-+|+.+ +|.|.|..+ ..|...+.+-|+.|++.||..+|..+ |+|||||.+||||+.-..+.|+||.
T Consensus 95 AAylvRqyvkh-nLyDRlSTR-----PFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFA 165 (1431)
T KOG1240|consen 95 AAYLVRQYVKH-NLYDRLSTR-----PFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFA 165 (1431)
T ss_pred HHHHHHHHHhh-hhhhhhccc-----hHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhccc
Confidence 88999999977 999999754 56778888889999999999999999 9999999999999999999999998
Q ss_pred CccccCCCccccCCcccceeeecccccccccccccccC-----------CCCchhhHHHHHHHHHHHHc-CCCCCCCCch
Q 005923 508 LARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-----------VITPKLDVFAFGVVVLELLS-GREAVTGDQN 575 (669)
Q Consensus 508 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----------~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~ 575 (669)
-.+...-.++..+.+.....+... -..|+|||.+-.. ..+++.||||.|||+.||++ |+.+|.-.
T Consensus 166 sFKPtYLPeDNPadf~fFFDTSrR-RtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-- 242 (1431)
T KOG1240|consen 166 SFKPTYLPEDNPADFTFFFDTSRR-RTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-- 242 (1431)
T ss_pred ccCCccCCCCCcccceEEEecCCc-eeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH--
Confidence 887654444333334333333322 2379999988531 26789999999999999998 56666421
Q ss_pred hHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 576 CEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
.+.+.... +.......++++-|. .++.|+..|++.||.+|.++++.++.-
T Consensus 243 ----QL~aYr~~--~~~~~e~~Le~Ied~------------~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 243 ----QLLAYRSG--NADDPEQLLEKIEDV------------SLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred ----HHHhHhcc--CccCHHHHHHhCcCc------------cHHHHHHHHHccCchhccCHHHHHHhh
Confidence 11111100 011112223333333 367999999999999999999999873
No 416
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.81 E-value=1.2e-19 Score=195.75 Aligned_cols=221 Identities=24% Similarity=0.360 Sum_probs=164.8
Q ss_pred HHhcCCCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeC
Q 005923 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKN 487 (669)
Q Consensus 408 l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrD 487 (669)
|+.+.|.|+.+++|.+.++...+.|.+|+..|+|.|.+... ...++|.-...+.++|+.||+|||... -..|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~----~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE----DIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc----ccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeee
Confidence 46789999999999999999999999999999999999864 345899999999999999999999754 239999
Q ss_pred CCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccC-------CCCchhhHHHHHHHH
Q 005923 488 LKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG-------VITPKLDVFAFGVVV 560 (669)
Q Consensus 488 ik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-------~~s~~sDV~S~Gvvl 560 (669)
++++|+++|..+.+|++|||+.......... .......-...|.|||.+.+. ..+.+.||||||+++
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~------~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~ 148 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEP------EAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM 148 (484)
T ss_pred eccccceeeeeEEEEechhhhcccccccccc------cccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence 9999999999999999999999876431100 001112234579999999763 147789999999999
Q ss_pred HHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005923 561 LELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640 (669)
Q Consensus 561 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 640 (669)
+|+++.+.||......+.. .+.+..+.. .-...+.|.+.... +...++..++.+||..+|.+||+++.|-
T Consensus 149 ~ei~~r~~~~~~~~~~~~~--~eii~~~~~------~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~ 218 (484)
T KOG1023|consen 149 YEILFRSGPFDLRNLVEDP--DEIILRVKK------GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIR 218 (484)
T ss_pred HHHHhccCccccccccCCh--HHHHHHHHh------cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHH
Confidence 9999999999853221111 111111111 01111112221111 3444789999999999999999999999
Q ss_pred HHHHHhhcCC
Q 005923 641 VTLSKIWSSS 650 (669)
Q Consensus 641 ~~L~~i~~~~ 650 (669)
..++.+....
T Consensus 219 ~~~~~~~~~~ 228 (484)
T KOG1023|consen 219 SKLLTINKGG 228 (484)
T ss_pred hhhhhhcccc
Confidence 9998887643
No 417
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=4.4e-20 Score=208.14 Aligned_cols=217 Identities=20% Similarity=0.238 Sum_probs=165.0
Q ss_pred HHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 005923 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480 (669)
Q Consensus 401 ~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~ 480 (669)
+..|+-+-..++|+|++..+..+.+....+-+|||+++ +|..++... ..++...+-.++.|++.|++|||+.+
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~-----~~~~~~e~~c~fKqL~~Gv~y~h~~G- 440 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSN-----GKLTPLEADCFFKQLLRGVKYLHSMG- 440 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcc-----cccchhhhhHHHHHHHHHHHHHHhcC-
Confidence 34466666678999999888887777666666999999 999999754 35888889999999999999999999
Q ss_pred CCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCch-hhHHHHHHH
Q 005923 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVV 559 (669)
Q Consensus 481 ~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~-sDV~S~Gvv 559 (669)
+.|||+|++|+++..++.+||+|||.+.....+.... ........|.-.|+|||.+.+..|.+. .||||.|++
T Consensus 441 --iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~----~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii 514 (601)
T KOG0590|consen 441 --LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN----IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGII 514 (601)
T ss_pred --ceeccCccccEEEecCCceEEeecCcceeeccCcchh----hhhhcCcccCCcCcCcccccccccCcchhhhhhccce
Confidence 9999999999999999999999999998775543211 133445788999999999999999775 799999999
Q ss_pred HHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 005923 560 VLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639 (669)
Q Consensus 560 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ev 639 (669)
+..|++|+.||......+... ... .....+-........-..++.+...++.++|+.||.+|.|+++|
T Consensus 515 ~~~m~~~~~~Wk~a~~~~~~~--------~~~----~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i 582 (601)
T KOG0590|consen 515 YICMILGRFPWKVAKKSDNSF--------KTN----NYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQI 582 (601)
T ss_pred EEEEecCCCccccccccccch--------hhh----ccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHH
Confidence 999999999987432211100 000 00000000011112224566778899999999999999999999
Q ss_pred HHH
Q 005923 640 FVT 642 (669)
Q Consensus 640 l~~ 642 (669)
++.
T Consensus 583 ~~d 585 (601)
T KOG0590|consen 583 LND 585 (601)
T ss_pred hhC
Confidence 863
No 418
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.75 E-value=5.8e-18 Score=164.96 Aligned_cols=130 Identities=20% Similarity=0.273 Sum_probs=103.8
Q ss_pred HHHhCCCCcccceeeEEEEEEE-CCCeeEEEEeccc----------------H-----------------HHHHHHHHhc
Q 005923 366 KIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMKGD----------------V-----------------SSEINILKKI 411 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~-~g~~vavK~~~~~----------------~-----------------~~E~~~l~~l 411 (669)
.+|+|+| |.||+|.. +|+.||||+++.+ | ..|++.+.++
T Consensus 4 ~ig~G~~-------~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 76 (190)
T cd05147 4 CISTGKE-------ANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL 76 (190)
T ss_pred ccccccc-------eEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 4899999 99999997 5889999998642 1 1389999999
Q ss_pred CCCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEeeCCCC
Q 005923 412 NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL-HKYTNPPYVHKNLKT 490 (669)
Q Consensus 412 ~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yL-H~~~~~~ivHrDik~ 490 (669)
.|+++.....+. ....+|||||+++++|....... ..+++....+++.|++.+|.|| |+.+ |+||||||
T Consensus 77 ~~~~v~~p~~~~--~~~~~iVmE~i~g~~l~~~~~~~-----~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP 146 (190)
T cd05147 77 VTAGIPCPEPIL--LKSHVLVMEFIGDDGWAAPRLKD-----APLSESKARELYLQVIQIMRILYQDCR---LVHADLSE 146 (190)
T ss_pred HHCCCCCCcEEE--ecCCEEEEEEeCCCCCcchhhhc-----CCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCH
Confidence 887764333222 22348999999988776553222 3588999999999999999999 6888 99999999
Q ss_pred CCeeecCCCcEEEcccCCccccC
Q 005923 491 SNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 491 ~NILl~~~~~~kl~DfGla~~~~ 513 (669)
+|||++ ++.++|+|||+|....
T Consensus 147 ~NIli~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 147 YNLLYH-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred HHEEEE-CCcEEEEEccccccCC
Confidence 999998 4789999999997653
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.73 E-value=2.3e-17 Score=161.09 Aligned_cols=130 Identities=22% Similarity=0.273 Sum_probs=105.5
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-CCeeEEEEeccc---------------------------------HHHHHHHHHhc
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKGD---------------------------------VSSEINILKKI 411 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~~---------------------------------~~~E~~~l~~l 411 (669)
.+|.|+| |.||+|... |+.||||+++.. +..|.+.+.++
T Consensus 4 ~ig~G~~-------~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 76 (190)
T cd05145 4 CISTGKE-------ANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL 76 (190)
T ss_pred eeecCCC-------cEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 3789999 999999984 999999998642 13578899999
Q ss_pred CCCCceeEeeEEEecCceeEEEEecCCCCHHHH-HhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCC
Q 005923 412 NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW-LHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLK 489 (669)
Q Consensus 412 ~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~-~~~~~ivHrDik 489 (669)
.|+++.....+... ..+|||||++++++... +.. ..++.....+++.|++.++.+||+ .+ |+|||||
T Consensus 77 ~~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~------~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlk 145 (190)
T cd05145 77 YEAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD------VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLS 145 (190)
T ss_pred HhCCCCCceEEEec--CCEEEEEEecCCCchhhhhhh------ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCC
Confidence 99987544443322 34899999998855443 432 247788999999999999999999 88 9999999
Q ss_pred CCCeeecCCCcEEEcccCCccccCC
Q 005923 490 TSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 490 ~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+|||++ ++.++|+|||+++....
T Consensus 146 P~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 146 EYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred hhhEEEE-CCCEEEEEcccceecCC
Confidence 9999999 88999999999987654
No 420
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.73 E-value=1.5e-18 Score=187.18 Aligned_cols=220 Identities=28% Similarity=0.375 Sum_probs=179.4
Q ss_pred CCCeeEEEEecc---------cHHHHHHHHHhcC-CCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCC
Q 005923 388 KGDDAAVKVMKG---------DVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLT 457 (669)
Q Consensus 388 ~g~~vavK~~~~---------~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~ 457 (669)
.|.-+|.|+.+. ....|..++..++ ||.+|++.-.+..+...+++++|..+|.|...+.+. ..++
T Consensus 21 a~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~-----~~f~ 95 (612)
T KOG0603|consen 21 AGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKE-----VMFD 95 (612)
T ss_pred ccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccC-----CchH
Confidence 345556655532 2446888899887 999999999999999999999999999999888654 4577
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccc
Q 005923 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYM 537 (669)
Q Consensus 458 ~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~ 537 (669)
......+...++-+++++|+.+ ++|||+|++||+++.+|++|+.|||+++..-.... .+||..||
T Consensus 96 ~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~------------~cgt~eym 160 (612)
T KOG0603|consen 96 ELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI------------ACGTYEYR 160 (612)
T ss_pred HHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhh------------cccchhhh
Confidence 7778888999999999999999 99999999999999999999999999997654321 17899999
Q ss_pred cccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHH
Q 005923 538 APEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFS 617 (669)
Q Consensus 538 aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~ 617 (669)
|||++. ......|.||||++++||++|..||.++. ...++ ......|......
T Consensus 161 ApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~----------~~~Il---------------~~~~~~p~~l~~~ 213 (612)
T KOG0603|consen 161 APEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDT----------MKRIL---------------KAELEMPRELSAE 213 (612)
T ss_pred hhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHH----------HHHHh---------------hhccCCchhhhHH
Confidence 999998 55778999999999999999999997611 11111 1124567788888
Q ss_pred HHHHHHHhcccCCCCCCCH--HHHHHHHHHhhcCCCCCC
Q 005923 618 MAQLAKNCTAHDLNARPSI--SEVFVTLSKIWSSSSDWD 654 (669)
Q Consensus 618 l~~li~~Cl~~dP~~RPt~--~evl~~L~~i~~~~~~~~ 654 (669)
+.+++..+...+|..|.-. ..+.+.++--.-...+|+
T Consensus 214 a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 214 ARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWN 252 (612)
T ss_pred HHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHh
Confidence 9999999999999999866 577777777777778887
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=2.4e-17 Score=159.58 Aligned_cols=183 Identities=15% Similarity=0.122 Sum_probs=134.9
Q ss_pred HHHhCCCCcccceeeEEEEEEECCCeeEEEEecc-----------cHHHHHHHHHhcC-CCCceeEeeEEEecCceeEEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG-----------DVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVY 433 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~-----------~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~ 433 (669)
.++.|.| |+||.....+..++.+.+.. .+.+|+++|++++ |+++++++++ +..+++|
T Consensus 9 ~l~~~~f-------~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 9 PLKSDTF-------GRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred eecCCCc-------ceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 3788999 99998877788888776642 2678999999995 5889999886 3569999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCC-CCCCeeecCCCcEEEcccCCcccc
Q 005923 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNL-KTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 434 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDi-k~~NILl~~~~~~kl~DfGla~~~ 512 (669)
||+.|.+|.+.+.. ....++.|++.+|+++|+++ |+|||| ||.|||+++++.++|+|||++...
T Consensus 78 eyI~G~~L~~~~~~------------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~ 142 (218)
T PRK12274 78 SYLAGAAMYQRPPR------------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRG 142 (218)
T ss_pred eeecCccHHhhhhh------------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceec
Confidence 99999998654321 11357789999999999999 999999 799999999999999999999865
Q ss_pred CCCccc-----cCCcccceeeeccccccccccccccc-CCCC-chhhHHHHHHHHHHHHcCCCCCCCCc
Q 005923 513 ESDEHE-----QGGYGLQLTRHVVGTYGYMAPEYIEN-GVIT-PKLDVFAFGVVVLELLSGREAVTGDQ 574 (669)
Q Consensus 513 ~~~~~~-----~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s-~~sDV~S~Gvvl~elltg~~p~~~~~ 574 (669)
...... ..........-...++.|+.|+-..- ...+ ...+.++-|.-+|.++|++.+..++.
T Consensus 143 ~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 143 NPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 432210 00000000111235666777765432 2333 57899999999999999998887654
No 422
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.72 E-value=4e-17 Score=166.08 Aligned_cols=201 Identities=22% Similarity=0.306 Sum_probs=143.0
Q ss_pred CCCCceeEeeEEEe---------------------------cCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHH
Q 005923 412 NHSNIIRLSGFCVH---------------------------EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQI 464 (669)
Q Consensus 412 ~H~niv~l~g~~~~---------------------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i 464 (669)
+|||||++.++|.+ ...+|+||...+. +|.++|..+ ..+.....-|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~------~~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR------HRSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC------CCchHHHHHH
Confidence 69999999988763 2357999999876 999999754 3666777789
Q ss_pred HHHHHHHHHHHHhCCCCCeEeeCCCCCCeee--cCCC--cEEEcccCCccccCCCccccCCcccceeeeccccccccccc
Q 005923 465 AYDVANALNYLHKYTNPPYVHKNLKTSNILL--DTNL--RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540 (669)
Q Consensus 465 ~~qia~~L~yLH~~~~~~ivHrDik~~NILl--~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 540 (669)
+.|+++|+.|||.++ +.|||+|++|||+ |+|. .+.|+|||.+-.-....-.. .+. ...-..-|....||||
T Consensus 347 laQlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlql-py~-S~~Vd~GGNa~lmAPE 421 (598)
T KOG4158|consen 347 LAQLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQL-PYE-SDEVDLGGNAKLMAPE 421 (598)
T ss_pred HHHHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeecccccccc-ccc-cccccCCCcceecchh
Confidence 999999999999999 9999999999999 4443 46889999886433211000 000 0011234677899999
Q ss_pred ccccCCC------CchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHH
Q 005923 541 YIENGVI------TPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDL 614 (669)
Q Consensus 541 ~l~~~~~------s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~ 614 (669)
+.....- -.|+|.|+.|.+.||++....||.+... ..... +..-+..+ ...|+.+
T Consensus 422 i~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe----m~L~~--------------r~Yqe~qL-Palp~~v 482 (598)
T KOG4158|consen 422 IATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE----MLLDT--------------RTYQESQL-PALPSRV 482 (598)
T ss_pred hhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch----heech--------------hhhhhhhC-CCCcccC
Confidence 8864321 2489999999999999999999986432 11000 00000111 3446677
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005923 615 AFSMAQLAKNCTAHDLNARPSISEVFVTL 643 (669)
Q Consensus 615 ~~~l~~li~~Cl~~dP~~RPt~~evl~~L 643 (669)
+..+.+|+...|+.||.+|++.+-..-.|
T Consensus 483 pp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 483 PPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred ChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 77889999999999999999977555444
No 423
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.71 E-value=2.8e-17 Score=162.49 Aligned_cols=154 Identities=12% Similarity=0.117 Sum_probs=121.6
Q ss_pred HHhCCCCcccceeeEEEEEEECCCeeEEEEeccc----------------HHHHHHHHHhcCCCCceeEeeEEEec----
Q 005923 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGD----------------VSSEINILKKINHSNIIRLSGFCVHE---- 426 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~~----------------~~~E~~~l~~l~H~niv~l~g~~~~~---- 426 (669)
++.|.| |.||....++..+|||.++.. +++|++.+.+++|++|..+..++...
T Consensus 39 l~~~~f-------~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~ 111 (232)
T PRK10359 39 FRNIDD-------TKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKT 111 (232)
T ss_pred ecCCCc-------eEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccccc
Confidence 578888 999998777889999999631 46889999999999999998886533
Q ss_pred ----CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEE
Q 005923 427 ----GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAK 502 (669)
Q Consensus 427 ----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~k 502 (669)
+..+|||||++|.+|.++.. ++. ....+++.+|..||+.+ ++|||++|+||++++++ ++
T Consensus 112 ~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 112 LRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred ccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-EE
Confidence 35799999999999988742 222 24569999999999999 99999999999999988 99
Q ss_pred EcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHH
Q 005923 503 ITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELL 564 (669)
Q Consensus 503 l~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ell 564 (669)
|+|||..+........ ..++....+..++|+|+||+.+.-+.
T Consensus 175 liDfg~~~~~~e~~a~--------------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK--------------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhhH--------------------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999998766332110 01334445567899999999877553
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.68 E-value=1.3e-16 Score=183.71 Aligned_cols=182 Identities=23% Similarity=0.300 Sum_probs=148.8
Q ss_pred HHHhCCCCcccceeeEEEEEEE-CCCeeEEEEecccHHHHHH----HHHhcC---CCCceeEeeEEEecCceeEEEEecC
Q 005923 366 KIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMKGDVSSEIN----ILKKIN---HSNIIRLSGFCVHEGNTYLVYEFAD 437 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~-~g~~vavK~~~~~~~~E~~----~l~~l~---H~niv~l~g~~~~~~~~~lV~e~~~ 437 (669)
++|.|+| |+||+|.. +|+.||+|+-+.--..|+. ++.||+ -+.|..+...+...+..+||+||.+
T Consensus 705 e~G~g~y-------~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~ 777 (974)
T KOG1166|consen 705 EIGEGSY-------GSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSP 777 (974)
T ss_pred eeccccc-------eEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccc
Confidence 4899999 99999987 6889999999875555544 344444 2334444444555677899999999
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeec-------CCCcEEEcccCCcc
Q 005923 438 NGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLD-------TNLRAKITNFGLAR 510 (669)
Q Consensus 438 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~-------~~~~~kl~DfGla~ 510 (669)
.|+|.+++... +.++|..++.++.|+++-+++||..+ |||+||||+|+||. +...++|+|||.+.
T Consensus 778 ~Gtlld~~N~~-----~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 778 YGTLLDLINTN-----KVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred cccHHHhhccC-----CCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 99999999744 56899999999999999999999999 99999999999993 23468999999998
Q ss_pred ccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCC
Q 005923 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRE 568 (669)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~ 568 (669)
.+.--.. .......++|-.+-++|...|..++.+.|.|.+..+++-||.|+.
T Consensus 850 Dm~lfp~------~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 850 DMKLFPD------GTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeeEcCC------CcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 7643221 234566789999999999999999999999999999999998864
No 425
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.67 E-value=3e-16 Score=159.77 Aligned_cols=219 Identities=21% Similarity=0.268 Sum_probs=139.1
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecc----------cHHHHHHHHHhcC----------CCCceeEeeEEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKG----------DVSSEINILKKIN----------HSNIIRLSGFCV 424 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~----------~~~~E~~~l~~l~----------H~niv~l~g~~~ 424 (669)
++.|.| +.||.++.. +++.|||+... ++.+|.-....+. |-.++--++...
T Consensus 20 i~~g~~-------~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 20 IGKGGF-------SIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEETT-------EEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred cccCCc-------eEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 888999 999999995 58999998731 2333333333321 211211111111
Q ss_pred ---------ecC--------ceeEEEEecCCCCHHHHHh---cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 005923 425 ---------HEG--------NTYLVYEFADNGALSDWLH---SNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYV 484 (669)
Q Consensus 425 ---------~~~--------~~~lV~e~~~~gsL~~~l~---~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~iv 484 (669)
... +.+++|+-+. ++|.+++. ... .....+....++.+..|+++.+++||+++ +|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~-~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lV 167 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRA-QTHSPLAFAARLSLTVQMIRLVANLHSYG---LV 167 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHT-TTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcc-cccchhHHHHHHHHHHHHHHHHHHHhhcc---eE
Confidence 111 3477888885 58888754 221 11233556677888899999999999999 99
Q ss_pred eeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeeccccccccccccccc--------CCCCchhhHHHH
Q 005923 485 HKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN--------GVITPKLDVFAF 556 (669)
Q Consensus 485 HrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--------~~~s~~sDV~S~ 556 (669)
|+||+++|+|++.+|.++|+||+.....+... .....+..|.+||.... -.++.+.|.|++
T Consensus 168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~-----------~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~L 236 (288)
T PF14531_consen 168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY-----------RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQL 236 (288)
T ss_dssp EST-SGGGEEE-TTS-EEE--GGGEEETTEEE-----------EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHH
T ss_pred ecccceeeEEEcCCCCEEEcChHHHeecCcee-----------eccCCCcccCChhhhhhhcccCcccceeeeccCHHHH
Confidence 99999999999999999999998876554321 11344578999997754 247889999999
Q ss_pred HHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCC
Q 005923 557 GVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNAR 633 (669)
Q Consensus 557 Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R 633 (669)
|+++|.|+++..||......... + .. -..+. +.+..+.+||..+|+.||.+|
T Consensus 237 G~~ly~lWC~~lPf~~~~~~~~~----------------~-------~~-f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 237 GITLYSLWCGRLPFGLSSPEADP----------------E-------WD-FSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHHHSS-STCCCGGGSTS----------------G-------GG-GTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHHHccCCCCCCCccccc----------------c-------cc-chhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999999999999854321100 0 01 12444 778889999999999999988
No 426
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=2.5e-17 Score=174.50 Aligned_cols=180 Identities=29% Similarity=0.454 Sum_probs=135.4
Q ss_pred CceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 427 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
...|+.|+++..++|.+||.+.+ .....+|...+.++.|++.|++| ++ .+|+|+||.||+...+..+||.||
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~--~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDF 400 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRR--TGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDF 400 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCC--cccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhh
Confidence 35789999999999999998664 44567889999999999999999 67 999999999999999999999999
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 585 (669)
|+........... ..........||..||+||.+.+..|+.|+||||+|++|+|++. -...+....
T Consensus 401 gl~ts~~~~~~~~--~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~----------- 467 (516)
T KOG1033|consen 401 GLVTSQDKDETVA--PAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA----------- 467 (516)
T ss_pred hheeecccCCccc--chhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH-----------
Confidence 9998775543110 11233455789999999999999999999999999999999997 222221100
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ev 639 (669)
.+ .+.-...++|....++|. =+.|+.+++...|.+||++.++
T Consensus 468 --t~-----~d~r~g~ip~~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 468 --TL-----TDIRDGIIPPEFLQDYPE-----EYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred --hh-----hhhhcCCCChHHhhcCcH-----HHHHHHHhcCCCcccCchHHHH
Confidence 00 011122333333334443 3589999999999999955443
No 427
>PRK10345 hypothetical protein; Provisional
Probab=99.66 E-value=6.7e-16 Score=152.08 Aligned_cols=126 Identities=17% Similarity=0.218 Sum_probs=98.9
Q ss_pred HHHhCCCCcccceeeEEEEEEECCCeeEEEEecc-------cHHHHHHHHHhc-----CCCCceeEeeEEEecC---c-e
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG-------DVSSEINILKKI-----NHSNIIRLSGFCVHEG---N-T 429 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~-------~~~~E~~~l~~l-----~H~niv~l~g~~~~~~---~-~ 429 (669)
.+|+|+| |.||.....+.. +||++.. ++.+|+++++++ +||||++++|++..+. . .
T Consensus 9 ~LG~G~~-------~~Vy~hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 9 PLGTGRH-------RKCYAHPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred eecCCCc-------eEEEECCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 4899999 999973323333 6888753 478899999999 5799999999998763 3 3
Q ss_pred eEEEEe--cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCCCeEeeCCCCCCeeecC----CCcEE
Q 005923 430 YLVYEF--ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANAL-NYLHKYTNPPYVHKNLKTSNILLDT----NLRAK 502 (669)
Q Consensus 430 ~lV~e~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L-~yLH~~~~~~ivHrDik~~NILl~~----~~~~k 502 (669)
.+|+|| ..+|+|.+++.+. .+++. ..++.+++.++ +|||+++ |+||||||+|||++. +++++
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~------~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~ 149 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQC------RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPV 149 (210)
T ss_pred EEEecCCCCcchhHHHHHHcc------cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEE
Confidence 378999 5579999999653 25554 35678888887 9999999 999999999999974 34899
Q ss_pred EcccCCcc
Q 005923 503 ITNFGLAR 510 (669)
Q Consensus 503 l~DfGla~ 510 (669)
|+||+.++
T Consensus 150 LiDg~G~~ 157 (210)
T PRK10345 150 VCDNIGES 157 (210)
T ss_pred EEECCCCc
Confidence 99955544
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.65 E-value=1.1e-15 Score=151.67 Aligned_cols=126 Identities=24% Similarity=0.392 Sum_probs=110.7
Q ss_pred HHHhCCCCcccceeeEEEEEEECCCeeEEEEecc---------------cHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG---------------DVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~---------------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
.+|+|.+ |.||+|.+.|..+++|..+. .+.+|+.++.+++|+++.....++...+..+
T Consensus 3 ~l~~G~~-------~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 75 (211)
T PRK14879 3 LIKRGAE-------AEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFI 75 (211)
T ss_pred ccccCce-------EEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCE
Confidence 3789999 99999999999999997542 2457899999999999888777777778889
Q ss_pred EEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcc
Q 005923 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR 510 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~ 510 (669)
+||||+++++|.+++... .+ .+..++.+++.+|.+||+.+ ++|+|++|.|||++ ++.++|+|||+++
T Consensus 76 lv~e~~~G~~L~~~~~~~--------~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~ 142 (211)
T PRK14879 76 IVMEYIEGEPLKDLINSN--------GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAE 142 (211)
T ss_pred EEEEEeCCcCHHHHHHhc--------cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCccc
Confidence 999999999999998643 12 78899999999999999999 99999999999999 7899999999987
Q ss_pred c
Q 005923 511 S 511 (669)
Q Consensus 511 ~ 511 (669)
.
T Consensus 143 ~ 143 (211)
T PRK14879 143 F 143 (211)
T ss_pred C
Confidence 5
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.64 E-value=1.6e-15 Score=149.11 Aligned_cols=123 Identities=24% Similarity=0.387 Sum_probs=104.3
Q ss_pred HHhCCCCcccceeeEEEEEEECCCeeEEEEecc---------------cHHHHHHHHHhcCCCCceeEeeEEEecCceeE
Q 005923 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG---------------DVSSEINILKKINHSNIIRLSGFCVHEGNTYL 431 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~---------------~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 431 (669)
+|.|+| |.||+|.++|..+++|.... .+.+|++++..++|+++.....++......++
T Consensus 2 ig~G~~-------~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l 74 (199)
T TIGR03724 2 IAKGAE-------AIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTI 74 (199)
T ss_pred CCCCce-------EEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEE
Confidence 678999 99999999999999998532 23469999999998876555555556777899
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 432 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
||||+++++|.+++.... . .++.+++.+|.+||+.+ ++|+|++|.||+++ ++.+++.|||+++.
T Consensus 75 v~e~~~g~~l~~~~~~~~------~------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 75 VMEYIEGKPLKDVIEEGN------D------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEEEECCccHHHHHhhcH------H------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999999999886431 0 78999999999999999 99999999999999 89999999999876
Q ss_pred c
Q 005923 512 A 512 (669)
Q Consensus 512 ~ 512 (669)
.
T Consensus 139 ~ 139 (199)
T TIGR03724 139 S 139 (199)
T ss_pred C
Confidence 4
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.59 E-value=6.7e-15 Score=166.47 Aligned_cols=123 Identities=24% Similarity=0.363 Sum_probs=106.9
Q ss_pred HHHhCCCCcccceeeEEEEEEECCCeeEEEEec---------------ccHHHHHHHHHhcCCCCceeEeeEEEecCcee
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------------GDVSSEINILKKINHSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~---------------~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 430 (669)
.+|.|.| |.||+|.+.+..+++|+.. ..+.+|++++++++|++++....++......+
T Consensus 340 ~iG~G~~-------g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 412 (535)
T PRK09605 340 LIGKGAE-------ADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT 412 (535)
T ss_pred eeccCCc-------EEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence 5899999 9999999987776665431 12567999999999999998888887777889
Q ss_pred EEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcc
Q 005923 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR 510 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~ 510 (669)
+||||+++++|.+++. ....++.+++.+|.|||+.+ ++||||||+|||+ +++.++|+|||+++
T Consensus 413 lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 413 IVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred EEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 9999999999999884 34678999999999999999 9999999999999 67899999999998
Q ss_pred cc
Q 005923 511 SA 512 (669)
Q Consensus 511 ~~ 512 (669)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 64
No 431
>smart00090 RIO RIO-like kinase.
Probab=99.58 E-value=7.7e-15 Score=147.95 Aligned_cols=134 Identities=19% Similarity=0.248 Sum_probs=105.1
Q ss_pred cchhHHHHHhCCCCcccceeeEEEEEE---ECCCeeEEEEeccc-------------------------------HHHHH
Q 005923 360 YKFQDLKIATGSFSEENRIQGSVYRGS---FKGDDAAVKVMKGD-------------------------------VSSEI 405 (669)
Q Consensus 360 ~~~~~l~~~~g~f~~~~~~~G~Vy~g~---~~g~~vavK~~~~~-------------------------------~~~E~ 405 (669)
|.+.+ .+|+|+| |.||+|. .+|..||+|.++.. +..|+
T Consensus 30 ~~i~~-~Lg~G~~-------g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 101 (237)
T smart00090 30 SAIGG-CISTGKE-------ANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEF 101 (237)
T ss_pred HHhCC-eeccCcc-------eeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHH
Confidence 44555 4899999 9999998 36899999988631 34699
Q ss_pred HHHHhcCCC--CceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 005923 406 NILKKINHS--NIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPY 483 (669)
Q Consensus 406 ~~l~~l~H~--niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~i 483 (669)
+.++++.+. .+.+++++ ...++||||+++++|..+.... ..+.......++.|++.++.+||+.+ .+
T Consensus 102 ~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~g--~i 170 (237)
T smart00090 102 RNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLYKEG--EL 170 (237)
T ss_pred HHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHHhcC--CE
Confidence 999999753 34444443 2458999999998887765322 23556677899999999999999876 39
Q ss_pred EeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 484 VHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 484 vHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
+||||||+||+++ ++.++|+|||.+....
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 9999999999999 8899999999987543
No 432
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.57 E-value=2.2e-15 Score=170.25 Aligned_cols=225 Identities=25% Similarity=0.371 Sum_probs=149.4
Q ss_pred HHhCCCCcccceeeEEEEEEEC--CCeeEEEEecccHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCCCCHHHH
Q 005923 367 IATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW 444 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 444 (669)
+..|.| |.||..+.+ .+..|.|.-++.+.-. .++.....|.+| |+=.+.
T Consensus 91 isngAy-------gavylvrh~~trqrfa~kiNkq~lilR-nilt~a~npfvv---------------------gDc~tl 141 (1205)
T KOG0606|consen 91 ISNGAY-------GAVYLVRHKETRQRFAMKINKQNLILR-NILTFAGNPFVV---------------------GDCATL 141 (1205)
T ss_pred eccCCC-------Cceeeeeccccccchhhcccccchhhh-ccccccCCccee---------------------chhhhh
Confidence 678888 999999775 5667776544332100 022222333333 444445
Q ss_pred HhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccc--cC--
Q 005923 445 LHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE--QG-- 520 (669)
Q Consensus 445 l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~--~~-- 520 (669)
++.. +.+.- +++.+++|||+.+ |+|||+||.|.+|+.-|++|+.|||+++........ ..
T Consensus 142 lk~~-----g~lPv--------dmvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~ 205 (1205)
T KOG0606|consen 142 LKNI-----GPLPV--------DMVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGH 205 (1205)
T ss_pred cccC-----CCCcc--------hhhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcc
Confidence 5432 33433 2378999999999 999999999999999999999999999854221100 00
Q ss_pred ---CcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhh
Q 005923 521 ---GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREK 597 (669)
Q Consensus 521 ---~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (669)
.......+.+.||+.|+|||++....|...+|+|++|+++||.+-|+.||+++..++ ++. .++.+.
T Consensus 206 I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee---lfg---~visd~----- 274 (1205)
T KOG0606|consen 206 IEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE---LFG---QVISDD----- 274 (1205)
T ss_pred hHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH---HHh---hhhhhh-----
Confidence 001122345789999999999999999999999999999999999999999986532 111 111110
Q ss_pred hhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhcCCCCCC
Q 005923 598 LRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIWSSSSDWD 654 (669)
Q Consensus 598 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~ 654 (669)
..+ .+..+..+.++.+++.+.|+.+|..|---...++.-+.=+-..+||.
T Consensus 275 -i~w------pE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 275 -IEW------PEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred -ccc------cccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 011 11133445678999999999999999654444444333334456666
No 433
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.55 E-value=2.4e-14 Score=140.70 Aligned_cols=124 Identities=19% Similarity=0.205 Sum_probs=100.9
Q ss_pred HHHhCCCCcccceeeEEEEEEE-CCCeeEEEEecc-----------------------------cHHHHHHHHHhcCCC-
Q 005923 366 KIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMKG-----------------------------DVSSEINILKKINHS- 414 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~-~g~~vavK~~~~-----------------------------~~~~E~~~l~~l~H~- 414 (669)
.++.|.| |.||++.. +|+.+|||+++. .+..|..++.++.|+
T Consensus 22 ~i~~G~~-------g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 22 QIGVGKE-------SDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred ccccCcc-------eEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 4899999 99999988 588999997542 145688889989887
Q ss_pred -CceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCe
Q 005923 415 -NIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493 (669)
Q Consensus 415 -niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NI 493 (669)
.+...++ ....++||||+++++|.+.... .....++.+++.++.++|+.+ ++||||+|+||
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Ni 156 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNI 156 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccE
Confidence 4444443 2456899999999998765421 234578899999999999998 99999999999
Q ss_pred eecCCCcEEEcccCCccccCC
Q 005923 494 LLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 494 Ll~~~~~~kl~DfGla~~~~~ 514 (669)
++++++.++|+|||++.....
T Consensus 157 ll~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 157 LVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred EEcCCCcEEEEECCccccCCC
Confidence 999999999999999976654
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.49 E-value=1.7e-13 Score=127.14 Aligned_cols=127 Identities=23% Similarity=0.310 Sum_probs=109.6
Q ss_pred HHhCCCCcccceeeEEEEEEECCCeeEEEEecc-----cHHHHHHHHHhcCC--CCceeEeeEEEecCceeEEEEecCCC
Q 005923 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG-----DVSSEINILKKINH--SNIIRLSGFCVHEGNTYLVYEFADNG 439 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~-----~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~e~~~~g 439 (669)
++.|.+ +.||++..++..+++|..+. ++..|+.+++.++| .++++++++...++..+++|||++++
T Consensus 6 i~~g~~-------~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 6 LKGGLT-------NRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cccccc-------cceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 678888 89999999888999999864 37889999999976 58999999988778899999999987
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 440 ALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 440 sL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
.+..+ ++.....++.+++.+|++||.....+++|+|++|+||++++++.+++.|||.++..
T Consensus 79 ~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 79 TLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 66432 45667788999999999999865456999999999999999899999999998753
No 435
>PRK10783 mltD membrane-bound lytic murein transglycosylase D; Provisional
Probab=99.49 E-value=9e-14 Score=151.64 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=92.3
Q ss_pred eeeeecCCCCCCHHHHHHhhCCCChHHHhhhcCCCCCCCCCCCCCcEEEeeecccCCCCCCcceeeeeEEEEecCCcchh
Q 005923 61 YLTFRSNPSYNTPVTIDYLFKTSHPNLIASINSITNVTATLPTDTPVLIPVNCSCSGGGDGDYYQFNTTYTIQNHVETYL 140 (669)
Q Consensus 61 ~~~y~~~~~g~tl~~Ia~~~~~~~~~~i~~~N~~~~~~~~l~~gq~l~IP~~c~c~~~~~~~~~~~~~~y~V~~~gdT~~ 140 (669)
...|+|++ |||+++||+.|| ++..+|+++|++. . +.|.+||.|.||.++.|.... ......+|+|+ +|||+|
T Consensus 343 ~~~y~Vk~-GDTL~sIA~r~g-vs~~~L~~~N~l~-~-~~L~~Gq~L~Ip~~~~~~~~~---~~~~~~~Y~Vr-~GDTL~ 414 (456)
T PRK10783 343 SRSYKVRS-GDTLSGIASRLN-VSTKDLQQWNNLR-G-SKLKVGQTLTIGAGSSAQRLA---NNSDSITYRVR-KGDSLS 414 (456)
T ss_pred ceEEEECC-CCcHHHHHHHHC-cCHHHHHHHcCCC-c-ccCCCCCEEEecCCccccccc---ccccceeEEeC-CCCCHH
Confidence 56799999 999999999999 9999999999995 3 889999999999887764221 11233689999 999999
Q ss_pred hhHhhhhcCchhHHHHHhcCCCCCCCCCCCceEEEeee
Q 005923 141 SVANNTYQGLTTCQAMMSQNPVDSRNLTVGLDLFVPLR 178 (669)
Q Consensus 141 ~IA~~~~~~lt~~~~l~~~N~~~~~~l~~G~~L~ip~~ 178 (669)
+|| ++|+ ++.++|+++|+...+.|++||+|.|++.
T Consensus 415 sIA-~kyg--Vtv~~L~~~N~l~~~~L~pGq~L~l~v~ 449 (456)
T PRK10783 415 SIA-KRHG--VNIKDVMRWNSDTAKNLQPGDKLTLFVK 449 (456)
T ss_pred HHH-HHhC--CCHHHHHHhcCCCCCcCCCCCEEEEecC
Confidence 999 7898 9999999999976559999999999875
No 436
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.47 E-value=3.8e-13 Score=135.86 Aligned_cols=120 Identities=16% Similarity=0.191 Sum_probs=97.4
Q ss_pred eEEEEEEECCCeeEEEEecc--------------------cHHHHHHHHHhcCCCCc--eeEeeEEEecCc----eeEEE
Q 005923 380 GSVYRGSFKGDDAAVKVMKG--------------------DVSSEINILKKINHSNI--IRLSGFCVHEGN----TYLVY 433 (669)
Q Consensus 380 G~Vy~g~~~g~~vavK~~~~--------------------~~~~E~~~l~~l~H~ni--v~l~g~~~~~~~----~~lV~ 433 (669)
|+||+....+..++||..+. .+.+|++++.+++|+++ ++.+++...+.. .++||
T Consensus 46 gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~ 125 (239)
T PRK01723 46 GTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILI 125 (239)
T ss_pred ccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEE
Confidence 89999999899999987631 24569999999998874 777877554332 25999
Q ss_pred EecCC-CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCcccc
Q 005923 434 EFADN-GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 434 e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~ 512 (669)
|++++ .+|.+++... .++.. .+.+++.+|.+||+.+ |+||||||.|||++.++.++|+|||.++..
T Consensus 126 e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 126 ERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred EecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence 99997 6999998642 34443 3578999999999999 999999999999999899999999998764
No 437
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=1.3e-13 Score=137.74 Aligned_cols=207 Identities=22% Similarity=0.350 Sum_probs=143.1
Q ss_pred HHHHhcCCCCceeEeeEEEecC-----ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 005923 406 NILKKINHSNIIRLSGFCVHEG-----NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480 (669)
Q Consensus 406 ~~l~~l~H~niv~l~g~~~~~~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~ 480 (669)
+-|-++.|.|||++..|+.+.. ...++.|||..|+|..+|++.+ .....+......+|+.||+.||.|||+. .
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~-~~~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTK-KNQKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHH-HhhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 3455567999999999987543 4689999999999999999875 3445688888899999999999999998 5
Q ss_pred CCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHH
Q 005923 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVV 560 (669)
Q Consensus 481 ~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl 560 (669)
||++|+++..+-|++..++-+|+.--.-........... ..-+..-.+-++|.+||+-.....+..+|||+||+-.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~----~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcA 272 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTR----EAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCA 272 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhh----HhhhhccccCCccccCCcCcccccccchhhhhhhHHH
Confidence 999999999999999999989975321111100000000 0001112356789999998888888899999999999
Q ss_pred HHHHcCCCCCCCCc-hhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 005923 561 LELLSGREAVTGDQ-NCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639 (669)
Q Consensus 561 ~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ev 639 (669)
+||.-+..--.... ..+.+. .+. ..+... ...+ -++++.+|++-+|..||+|+++
T Consensus 273 lemailEiq~tnseS~~~~ee---~ia---------~~i~~l-en~l-----------qr~~i~kcl~~eP~~rp~ar~l 328 (458)
T KOG1266|consen 273 LEMAILEIQSTNSESKVEVEE---NIA---------NVIIGL-ENGL-----------QRGSITKCLEGEPNGRPDARLL 328 (458)
T ss_pred HHHHHheeccCCCcceeehhh---hhh---------hheeec-cCcc-----------ccCcCcccccCCCCCCcchhhh
Confidence 99987664422111 100000 000 001010 1111 1467899999999999999988
Q ss_pred HHH
Q 005923 640 FVT 642 (669)
Q Consensus 640 l~~ 642 (669)
+.+
T Consensus 329 lfH 331 (458)
T KOG1266|consen 329 LFH 331 (458)
T ss_pred hcC
Confidence 754
No 438
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.42 E-value=9e-13 Score=128.03 Aligned_cols=127 Identities=22% Similarity=0.285 Sum_probs=93.0
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-CCeeEEEEecccH-------------------------------HHHHHHHHhcCC
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKGDV-------------------------------SSEINILKKINH 413 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~~~-------------------------------~~E~~~l~~l~H 413 (669)
.++.|+| |.||+|... |+.||||+++... ..|.+.+.++++
T Consensus 4 ~lg~G~~-------g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~ 76 (187)
T cd05119 4 PIGTGKE-------ADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYE 76 (187)
T ss_pred ccccccc-------eeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHH
Confidence 3789999 999999986 8899999876421 234445555543
Q ss_pred CC--ceeEeeEEEecCceeEEEEecCCCCHHHH-HhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCC
Q 005923 414 SN--IIRLSGFCVHEGNTYLVYEFADNGALSDW-LHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLK 489 (669)
Q Consensus 414 ~n--iv~l~g~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~-~~~~~ivHrDik 489 (669)
.. +.+.+++ ...++||||++++.+... +... ... .....++.+++.++.++|. .+ ++|||||
T Consensus 77 ~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~------~~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~ 142 (187)
T cd05119 77 AGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV------RLL-EDPEELYDQILELMRKLYREAG---LVHGDLS 142 (187)
T ss_pred cCCCCCceEec----CCCEEEEEEeCCCCccChhhhhh------hhc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCC
Confidence 32 3444433 246899999999544321 1111 011 5677899999999999999 88 9999999
Q ss_pred CCCeeecCCCcEEEcccCCccccCC
Q 005923 490 TSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 490 ~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
|+||+++ ++.++++|||.++....
T Consensus 143 p~Nili~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 143 EYNILVD-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred hhhEEEE-CCcEEEEECcccccccC
Confidence 9999999 99999999999976543
No 439
>PRK13914 invasion associated secreted endopeptidase; Provisional
Probab=99.37 E-value=1.8e-12 Score=138.67 Aligned_cols=174 Identities=14% Similarity=0.104 Sum_probs=98.4
Q ss_pred eeeecCCCCCCHHHHHHhhCCCChHHHhhhcCCCCCCCCCCCCCcEEEeeecccCCCCC-----------CcceeeeeEE
Q 005923 62 LTFRSNPSYNTPVTIDYLFKTSHPNLIASINSITNVTATLPTDTPVLIPVNCSCSGGGD-----------GDYYQFNTTY 130 (669)
Q Consensus 62 ~~y~~~~~g~tl~~Ia~~~~~~~~~~i~~~N~~~~~~~~l~~gq~l~IP~~c~c~~~~~-----------~~~~~~~~~y 130 (669)
-.|.|++ |||||.||++|| +++++|+++|++ ..+.|.+||.|.||-...-....+ ....+....-
T Consensus 28 ~tytVq~-GDTLw~IA~~yg-vtv~~I~~~N~l--~~~~I~~Gq~L~Ip~~~~~~~~~~~Vta~~LNVRsgps~s~~IIg 103 (481)
T PRK13914 28 STVVVEA-GDTLWGIAQSKG-TTVDAIKKANNL--TTDKIVPGQKLQVNEVAAAEKTEKSVSATWLNVRSGAGVDNSIIT 103 (481)
T ss_pred ceEEECC-CCCHHHHHHHHC-CCHHHHHHHhCC--CcccccCCCEEEeCCCCcccccceeEecceEEEecCCCCCcceee
Confidence 3489999 999999999999 999999999999 567899999999996542110000 0001111223
Q ss_pred EEecCCcchhhhHhh---h----hc-Cc---hhHHHHHhcCCCCCCCCCCCceEEE--------eee----------cC-
Q 005923 131 TIQNHVETYLSVANN---T----YQ-GL---TTCQAMMSQNPVDSRNLTVGLDLFV--------PLR----------CA- 180 (669)
Q Consensus 131 ~V~~~gdT~~~IA~~---~----~~-~l---t~~~~l~~~N~~~~~~l~~G~~L~i--------p~~----------c~- 180 (669)
.+. .|+.+-.+... - |. |. +.-+-|...=.. ..+..-|++.= |.. .+
T Consensus 104 sl~-~G~~V~Vl~~~~ngW~kI~~~~GktGwV~~~YLs~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (481)
T PRK13914 104 SIK-GGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTDKVTS--TPVAPTQEVKKETTTQQAAPAAETKTEVKQTTQAT 180 (481)
T ss_pred eec-CCCEEEEeecccCCeEEEEcCCCCEEEEecccccCCCcc--CccccchhhhhccccccccchhcccchhccCCccc
Confidence 334 44443332100 0 11 10 000000000000 00000011100 000 00
Q ss_pred CCCcc--cccCC---ceEEEEEEcCCCCCHHHHHHHhCCCHHhHHHhcCCCCCCCCCCCcccccccCC
Q 005923 181 CPSRD--QAASG---FNHLLTYMVTWGDSISAIAQLFNVDERSVLDANKLSQDDLIFPFTPILVPLKT 243 (669)
Q Consensus 181 c~~~~--~~~~~---~~~~~tY~v~~GDtl~~Ia~~f~v~~~~l~~~N~l~~~~~l~p~~~l~iP~~~ 243 (669)
.|... ....+ ..-..+|.|++||+||.||++||+++++|++||++.. ..|+|||.|.||...
T Consensus 181 ~~~~~~~~~~~~~~~~~~a~tytVq~GDTL~sIAkrYgVtv~eI~~~N~l~s-~~L~pGQ~L~Ip~sa 247 (481)
T PRK13914 181 TPAPKVAETKETPVVDQNATTHAVKSGDTIWALSVKYGVSVQDIMSWNNLSS-SSIYVGQKLAIKQTA 247 (481)
T ss_pred CCcccccccccCccccCCCeEEEECCCCCHHHHHHHHCCCHHHHHHhcCCCc-cccCCCCEEEecCCC
Confidence 00000 00000 0013589999999999999999999999999999954 679999999998654
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.29 E-value=1.1e-11 Score=136.15 Aligned_cols=134 Identities=21% Similarity=0.307 Sum_probs=96.5
Q ss_pred HHHHHhCCCCcccceeeEEEEEEE-CCCeeEEEEeccc------------------------------------------
Q 005923 364 DLKIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMKGD------------------------------------------ 400 (669)
Q Consensus 364 ~l~~~~g~f~~~~~~~G~Vy~g~~-~g~~vavK~~~~~------------------------------------------ 400 (669)
+.-+|.|++ |.||+|++ +|+.||||+.+..
T Consensus 122 ~~plasaSi-------gQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l 194 (437)
T TIGR01982 122 EKPLAAASI-------AQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTL 194 (437)
T ss_pred Ccceeeeeh-------hheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHH
Confidence 345899999 99999998 6899999998542
Q ss_pred -----HHHHHHHHHhc----CCCCceeEeeEEE-ecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHH
Q 005923 401 -----VSSEINILKKI----NHSNIIRLSGFCV-HEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470 (669)
Q Consensus 401 -----~~~E~~~l~~l----~H~niv~l~g~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~ 470 (669)
+..|+..+.++ +|.+-+.+-.++. .....+|||||++|++|.++..... ..+ .+.+++..++.
T Consensus 195 ~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~----~~~---~~~~ia~~~~~ 267 (437)
T TIGR01982 195 RRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE----AGL---DRKALAENLAR 267 (437)
T ss_pred HHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh----cCC---CHHHHHHHHHH
Confidence 22244444443 2333333333332 2345799999999999998875321 112 23456777666
Q ss_pred -HHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 471 -ALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 471 -~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
.+..+|..+ ++|+|++|.||+++++++++++|||++.....
T Consensus 268 ~~l~ql~~~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 268 SFLNQVLRDG---FFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHHhCC---ceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 478899988 99999999999999999999999999987754
No 441
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=6.6e-13 Score=150.22 Aligned_cols=209 Identities=23% Similarity=0.318 Sum_probs=159.8
Q ss_pred HHHHHHHhcC-CCCceeEeeEEEecCceeEEEEecCCCCHHHHH-hcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hCC
Q 005923 403 SEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL-HSNRYQTSDNLTWKQRVQIAYDVANALNYLH-KYT 479 (669)
Q Consensus 403 ~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l-~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH-~~~ 479 (669)
.|..+-+.+. |+|++.+++...+.+..+++.+|..+|++.+.+ +.. ....+....-.++.|+..++.|+| ..+
T Consensus 69 ~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~----~~~~~~~~~~~~~~ql~s~l~~~H~~~~ 144 (601)
T KOG0590|consen 69 TETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPD----STGTSSSSASRYLPQLNSGLSYLHPENG 144 (601)
T ss_pred ccccccccccccccccccCCccCCCcccccccCcccccccccccccCC----ccCCCCcchhhhhhhhccCccccCcccc
Confidence 4677777776 999999999999999999999999999998888 432 113455566678999999999999 888
Q ss_pred CCCeEeeCCCCCCeeecCCC-cEEEcccCCccccCC-CccccCCcccceeeeccc-cccccccccccc-CCCCchhhHHH
Q 005923 480 NPPYVHKNLKTSNILLDTNL-RAKITNFGLARSAES-DEHEQGGYGLQLTRHVVG-TYGYMAPEYIEN-GVITPKLDVFA 555 (669)
Q Consensus 480 ~~~ivHrDik~~NILl~~~~-~~kl~DfGla~~~~~-~~~~~~~~~~~~~~~~~g-t~~y~aPE~l~~-~~~s~~sDV~S 555 (669)
+.||||||+|.+++..+ ..|++|||+|..... ... ........| ++.|+|||...+ ....+..|+||
T Consensus 145 ---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~------~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S 215 (601)
T KOG0590|consen 145 ---VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGA------ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWS 215 (601)
T ss_pred ---cccCCCCCccchhccCCCcccCCCchhhccccccCCc------ceeeecccCCCCCCCCcccccchhhcCCCccccc
Confidence 99999999999999999 999999999988765 221 233455677 999999999988 45577899999
Q ss_pred HHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccC--CCCcHHHHHHHHHHHHHhcccCCCCC
Q 005923 556 FGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLR--NEYPLDLAFSMAQLAKNCTAHDLNAR 633 (669)
Q Consensus 556 ~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~--~~~~~~~~~~l~~li~~Cl~~dP~~R 633 (669)
.|+++.-+++|..|+....... .....+++...+ ............++..+++..+|..|
T Consensus 216 ~g~~l~~~~~g~~p~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r 277 (601)
T KOG0590|consen 216 LGIVLSAMLTGELPWDFPSRKD------------------GRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNR 277 (601)
T ss_pred ccccccccccCCCCcccccccc------------------ccceeecccccccccCccccCChhhhhcccccccCCchhc
Confidence 9999999999999987433211 111112221111 11222334457788999999999999
Q ss_pred CCHHHHHHH
Q 005923 634 PSISEVFVT 642 (669)
Q Consensus 634 Pt~~evl~~ 642 (669)
.+.+++...
T Consensus 278 ~s~~~~~~d 286 (601)
T KOG0590|consen 278 LSIEELKLD 286 (601)
T ss_pred ccccccccc
Confidence 999988643
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.16 E-value=1.1e-10 Score=111.34 Aligned_cols=122 Identities=20% Similarity=0.201 Sum_probs=93.1
Q ss_pred HHhCCCCcccceeeEEEEEEECCCeeEEEEecc------cHHHHHHHHHhcCCCCce-eEeeEEEecCceeEEEEecCCC
Q 005923 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG------DVSSEINILKKINHSNII-RLSGFCVHEGNTYLVYEFADNG 439 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~------~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lV~e~~~~g 439 (669)
++.|.+ +.||+....+..+++|.... ++..|+.+++.+.+.+++ +++.+. ....++||||+++.
T Consensus 6 l~~G~~-------~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~ 76 (170)
T cd05151 6 LKGGMT-------NKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGS 76 (170)
T ss_pred cCCccc-------CceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCC
Confidence 456666 88999999999999998743 357899999999765554 444443 34568999999998
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 440 ALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT--NPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 440 sL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~--~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
++.+.- . ....++.+++.+|+.||+.+ ...++|+|+++.||+++ ++.++++|||.+..
T Consensus 77 ~l~~~~----------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 77 ELLTED----------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccccc----------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 775430 0 11245678999999999886 23369999999999999 67899999999864
No 443
>PF01476 LysM: LysM domain; InterPro: IPR018392 This domain is about 40 residues long and is found in a variety of enzymes involved in bacterial cell wall degradation []. This domain may have a general peptidoglycan binding function.; GO: 0016998 cell wall macromolecule catabolic process; PDB: 2DJP_A 3ZQD_A 1Y7M_B 4A52_A 2L9Y_A 1E0G_A.
Probab=99.09 E-value=5.1e-11 Score=86.62 Aligned_cols=43 Identities=23% Similarity=0.519 Sum_probs=36.0
Q ss_pred EEcCCCCCHHHHHHHhCCCHHhHHHhc-CCCCCCCCCCCcccccc
Q 005923 197 YMVTWGDSISAIAQLFNVDERSVLDAN-KLSQDDLIFPFTPILVP 240 (669)
Q Consensus 197 Y~v~~GDtl~~Ia~~f~v~~~~l~~~N-~l~~~~~l~p~~~l~iP 240 (669)
|+|++|||+++||++||++.++|++|| ++.... |+|||.|.||
T Consensus 1 y~V~~gDtl~~IA~~~~~~~~~l~~~N~~~~~~~-l~~G~~l~iP 44 (44)
T PF01476_consen 1 YTVQPGDTLWSIAKRYGISVDELMELNPNIDSDN-LQPGQKLCIP 44 (44)
T ss_dssp EEE-TT--HHHHHHHTTS-HHHHHHHCCTTHGGC-GGTTEEEEEC
T ss_pred CEECcCCcHHHHHhhhhhhHhHHHHhcCCCCccc-CCCCCEEEeC
Confidence 899999999999999999999999999 775545 9999999998
No 444
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.07 E-value=1.7e-10 Score=125.24 Aligned_cols=236 Identities=24% Similarity=0.288 Sum_probs=170.9
Q ss_pred HHh--CCCCcccceeeEEEEEEE----CCCeeEEEEeccc---------HHHHHHHHHhcC-CCCceeEeeEEEecCcee
Q 005923 367 IAT--GSFSEENRIQGSVYRGSF----KGDDAAVKVMKGD---------VSSEINILKKIN-HSNIIRLSGFCVHEGNTY 430 (669)
Q Consensus 367 ~~~--g~f~~~~~~~G~Vy~g~~----~g~~vavK~~~~~---------~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~ 430 (669)
+|. |.+ |.||.+.. .+..+|+|.-+.- -.+|+...++++ |+|.++....+...+..+
T Consensus 122 ~g~~~g~~-------~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 122 TGSLPGSK-------GSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred cccCCCCC-------ceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 566 888 99999877 4677899885432 235777777774 999999888888889999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHhCCCCCeEeeCCCCCCeeecCC-CcEEEcc
Q 005923 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN----ALNYLHKYTNPPYVHKNLKTSNILLDTN-LRAKITN 505 (669)
Q Consensus 431 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~----~L~yLH~~~~~~ivHrDik~~NILl~~~-~~~kl~D 505 (669)
+=.|++. .+|.++.+.. ...+....++.+..+... ||.++|+.+ ++|-|+||.||+..++ ..+++.|
T Consensus 195 iqtE~~~-~sl~~~~~~~----~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTP----CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred eeecccc-chhHHhhhcc----cccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCC
Confidence 9999986 6888888753 334555666666777777 999999998 9999999999999999 8899999
Q ss_pred cCCccccCCCccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHH
Q 005923 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585 (669)
Q Consensus 506 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 585 (669)
||+...+........ ........|...|++||.+. +.++...|+|++|.++.|...+......+....
T Consensus 267 f~~v~~i~~~~~~~~---~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-------- 334 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSV---FKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSS-------- 334 (524)
T ss_pred cceeEEccCCccccc---eeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCC--------
Confidence 999998876542211 12223346788899999876 567889999999999999988876665331100
Q ss_pred HHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005923 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641 (669)
Q Consensus 586 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 641 (669)
...++... +..++-.....++...+..|++.+|..|++..++..
T Consensus 335 ---------W~~~r~~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 335 ---------WSQLRQGY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ---------cccccccc---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 01111111 111222222344556889999999999999887764
No 445
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.04 E-value=7e-10 Score=123.43 Aligned_cols=136 Identities=20% Similarity=0.256 Sum_probs=88.4
Q ss_pred hhHHHHHhCCCCcccceeeEEEEEEEC--CCeeEEEEeccc---------------------------------------
Q 005923 362 FQDLKIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGD--------------------------------------- 400 (669)
Q Consensus 362 ~~~l~~~~g~f~~~~~~~G~Vy~g~~~--g~~vavK~~~~~--------------------------------------- 400 (669)
|++.-+|.|++ |.||+|++. |+.||||+.+..
T Consensus 122 fd~~PlasaSi-------aQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~ 194 (537)
T PRK04750 122 FDIKPLASASI-------AQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFE 194 (537)
T ss_pred cChhhhcCCCc-------cEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHH
Confidence 34456899999 999999983 899999998632
Q ss_pred --------HHHHHHHHHhcC----CCCceeEeeEEEe-cCceeEEEEecCCCCHHHH--HhcCCCCCCCCCCHHHHHHHH
Q 005923 401 --------VSSEINILKKIN----HSNIIRLSGFCVH-EGNTYLVYEFADNGALSDW--LHSNRYQTSDNLTWKQRVQIA 465 (669)
Q Consensus 401 --------~~~E~~~l~~l~----H~niv~l~g~~~~-~~~~~lV~e~~~~gsL~~~--l~~~~~~~~~~l~~~~~~~i~ 465 (669)
+.+|+.-+.+++ +.+.+.+=.++.+ ....+|||||++|+.+.++ +.... .....+....+..++
T Consensus 195 ~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g-~d~~~la~~~v~~~~ 273 (537)
T PRK04750 195 KTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAG-TDMKLLAERGVEVFF 273 (537)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcC-CCHHHHHHHHHHHHH
Confidence 122333333331 3333333333322 3456899999999999875 32211 001123333333333
Q ss_pred HHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC----cEEEcccCCccccCCC
Q 005923 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL----RAKITNFGLARSAESD 515 (669)
Q Consensus 466 ~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~----~~kl~DfGla~~~~~~ 515 (669)
.|+ ...+ ++|+|++|.||+++.++ ++++.|||++..+...
T Consensus 274 ~Qi-------f~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 274 TQV-------FRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred HHH-------HhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 333 4567 99999999999999888 9999999999877554
No 446
>COG1388 LytE FOG: LysM repeat [Cell envelope biogenesis, outer membrane]
Probab=99.03 E-value=2.2e-10 Score=103.61 Aligned_cols=112 Identities=23% Similarity=0.296 Sum_probs=89.8
Q ss_pred HHHhhCCCChHHHhhhcCCCCCCCCCCCCCcEEEeeecccCCCCCCcceeeeeEEEEecCCcchhhhHhhhhcCchhHHH
Q 005923 76 IDYLFKTSHPNLIASINSITNVTATLPTDTPVLIPVNCSCSGGGDGDYYQFNTTYTIQNHVETYLSVANNTYQGLTTCQA 155 (669)
Q Consensus 76 Ia~~~~~~~~~~i~~~N~~~~~~~~l~~gq~l~IP~~c~c~~~~~~~~~~~~~~y~V~~~gdT~~~IA~~~~~~lt~~~~ 155 (669)
||..|+ +++.+|+.+|.+....+.+.+||.|.+|.. ..+.+. .|++.+..++..+. ...
T Consensus 1 ia~~~~-~~v~~l~~~n~~~~~s~~i~~gq~l~~~~~---------------~~~~~~-~~~~~~~~~~~~~~--~~~-- 59 (124)
T COG1388 1 IASKYG-VSVKALKKANALTGKSDAIKPGQVLKIPGD---------------ISSTVN-AGQTLSSLSNKVSD--SSS-- 59 (124)
T ss_pred Cccccc-ccHHHHHHHhcccCCCCccccCceEEccCC---------------cccccc-cccccccccceeec--ccc--
Confidence 578899 999999999998422899999999999865 236677 89999999943333 110
Q ss_pred HHhcCCCCCCCCCCCceEEEeeecCCCCcccccCCceEEEEEEcCCCCCHHHHHHHhCCCHHhHHHhcCCCCCCCCCCCc
Q 005923 156 MMSQNPVDSRNLTVGLDLFVPLRCACPSRDQAASGFNHLLTYMVTWGDSISAIAQLFNVDERSVLDANKLSQDDLIFPFT 235 (669)
Q Consensus 156 l~~~N~~~~~~l~~G~~L~ip~~c~c~~~~~~~~~~~~~~tY~v~~GDtl~~Ia~~f~v~~~~l~~~N~l~~~~~l~p~~ 235 (669)
+....+..+|+|+.||+|+.||++|++++..|+++|++..+ .+++||
T Consensus 60 --------------------------------~~~~~~~~~~~V~~gdtL~~Ia~~~~~tv~~l~~~n~l~~~-~i~~gq 106 (124)
T COG1388 60 --------------------------------ASKAPPVVTYTVKKGDTLSKIARKYGVTVAELKQLNNLSSD-KIKVGQ 106 (124)
T ss_pred --------------------------------ccccCCCceEEEecCCCHHHHHHHhCCCHHHHHHHhccCCC-ceecCc
Confidence 00111235899999999999999999999999999999655 999999
Q ss_pred cccccc
Q 005923 236 PILVPL 241 (669)
Q Consensus 236 ~l~iP~ 241 (669)
.|.+|.
T Consensus 107 ~l~~~~ 112 (124)
T COG1388 107 KLKLPV 112 (124)
T ss_pred EEEEec
Confidence 999987
No 447
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.02 E-value=3.4e-09 Score=102.80 Aligned_cols=98 Identities=16% Similarity=0.228 Sum_probs=75.4
Q ss_pred HHHHHHHhcCC--CCceeEeeEEEecCceeEEEEecCCCCHHH-HHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhC
Q 005923 403 SEINILKKINH--SNIIRLSGFCVHEGNTYLVYEFADNGALSD-WLHSNRYQTSDNLTWKQRVQIAYDVANALNYL-HKY 478 (669)
Q Consensus 403 ~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yL-H~~ 478 (669)
+|...|+++.. -++.+.+++ ...+|||||+.++.+.. .|++ ..++..+...+..+++.+|..| |..
T Consensus 75 kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l~~l~H~~ 144 (197)
T cd05146 75 KEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMMKQLYKEC 144 (197)
T ss_pred HHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 69999999853 466667754 46789999998654422 2222 1245566778889999999999 888
Q ss_pred CCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCC
Q 005923 479 TNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514 (669)
Q Consensus 479 ~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~ 514 (669)
+ +||+||++.|||++ ++.+.|+|||.+.....
T Consensus 145 g---lVHGDLs~~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 145 N---LVHADLSEYNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred C---eecCCCCHHHEEEE-CCcEEEEECCCceeCCC
Confidence 8 99999999999997 46899999999886643
No 448
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.97 E-value=9.7e-09 Score=112.80 Aligned_cols=157 Identities=23% Similarity=0.323 Sum_probs=117.3
Q ss_pred CCCeeEEEEeccc-------HHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHH
Q 005923 388 KGDDAAVKVMKGD-------VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460 (669)
Q Consensus 388 ~g~~vavK~~~~~-------~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~ 460 (669)
.+.+|.|...+.. ..+-++.|+.++||||++++.....++..|||.|-+. -|..++.. +....
T Consensus 36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~--------l~~~~ 105 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE--------LGKEE 105 (690)
T ss_pred cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH--------hHHHH
Confidence 3556666555421 4456788999999999999999999999999999985 78888864 33555
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCCcccceeeeccccccccccc
Q 005923 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540 (669)
Q Consensus 461 ~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 540 (669)
+.-.+.||+.||.|||+.++ ++|++|.-..|+|++.|..||++|.++........ ..+...--..|..|+
T Consensus 106 v~~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--------~~~~~~~~~s~~~P~ 175 (690)
T KOG1243|consen 106 VCLGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--------PAKSLYLIESFDDPE 175 (690)
T ss_pred HHHHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--------ccccchhhhcccChh
Confidence 66688999999999985442 99999999999999999999999998876543221 001111222456666
Q ss_pred ccccCCCCchhhHHHHHHHHHHHHcC
Q 005923 541 YIENGVITPKLDVFAFGVVVLELLSG 566 (669)
Q Consensus 541 ~l~~~~~s~~sDV~S~Gvvl~elltg 566 (669)
.+.... -..|.|-||+++||++.|
T Consensus 176 ~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 176 EIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hcCccc--cchhhhhHHHHHHHHhCc
Confidence 543222 346999999999999999
No 449
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.88 E-value=1.2e-08 Score=101.46 Aligned_cols=133 Identities=22% Similarity=0.344 Sum_probs=103.5
Q ss_pred HHhCCCCcccceeeEEEEEEECC-CeeEEEEecc--------cHHHHHHHHHhcCC--CCceeEeeEEEec---CceeEE
Q 005923 367 IATGSFSEENRIQGSVYRGSFKG-DDAAVKVMKG--------DVSSEINILKKINH--SNIIRLSGFCVHE---GNTYLV 432 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g-~~vavK~~~~--------~~~~E~~~l~~l~H--~niv~l~g~~~~~---~~~~lV 432 (669)
++.|.+ +.||+....+ ..+++|.... ++..|.++++.+++ .++.+++.+.... +..++|
T Consensus 6 l~~G~~-------n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v 78 (223)
T cd05154 6 LSGGQS-------NLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYV 78 (223)
T ss_pred cCCCcc-------ceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEE
Confidence 567777 8899998865 8899998643 46789999999976 4467788877654 256899
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT--------------------------------- 479 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~--------------------------------- 479 (669)
|||+++++|.+.+.. ..++..++..++.+++.+|..||+..
T Consensus 79 ~e~i~G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (223)
T cd05154 79 MERVDGRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTD 152 (223)
T ss_pred EEEeCCEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccc
Confidence 999999888765421 24677788888888888888888531
Q ss_pred --------------------CCCeEeeCCCCCCeeecC--CCcEEEcccCCcccc
Q 005923 480 --------------------NPPYVHKNLKTSNILLDT--NLRAKITNFGLARSA 512 (669)
Q Consensus 480 --------------------~~~ivHrDik~~NILl~~--~~~~kl~DfGla~~~ 512 (669)
...++|+|+.+.||+++. +..+.|+||+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 153 EPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred ccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 245899999999999998 566899999988754
No 450
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.86 E-value=1.1e-07 Score=101.38 Aligned_cols=162 Identities=22% Similarity=0.331 Sum_probs=126.8
Q ss_pred eEEEEEEE--CCCeeEEEEeccc-------HHHHHHHHHhcCCCCceeEeeEEE----ecCceeEEEEecCC-CCHHHHH
Q 005923 380 GSVYRGSF--KGDDAAVKVMKGD-------VSSEINILKKINHSNIIRLSGFCV----HEGNTYLVYEFADN-GALSDWL 445 (669)
Q Consensus 380 G~Vy~g~~--~g~~vavK~~~~~-------~~~E~~~l~~l~H~niv~l~g~~~----~~~~~~lV~e~~~~-gsL~~~l 445 (669)
-+.||+.- +|..+.+|++..+ -..-+++++++.|.|+|++..++. .+..++|||+|.++ ++|.++-
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 57888876 6889999999432 234688999999999999998876 34567999999997 5777765
Q ss_pred hcCC----------CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 446 HSNR----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 446 ~~~~----------~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
.... ......+++..++.++.|+..||.++|+.| +..+-|.+++||++.+.+++|+..|..-....+
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 4321 112235788999999999999999999999 999999999999999999999998887766543
Q ss_pred ccccCCcccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCC
Q 005923 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREA 569 (669)
Q Consensus 516 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p 569 (669)
.. |-+++ -.+-|.=.||.+++.|.+|.+-
T Consensus 447 ~~----------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 447 PT----------------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CC----------------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 20 11211 2367999999999999999765
No 451
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.86 E-value=2.7e-08 Score=93.55 Aligned_cols=118 Identities=28% Similarity=0.351 Sum_probs=90.9
Q ss_pred eEEEEEEECCCeeEEEEec---------------ccHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCCCCHHHH
Q 005923 380 GSVYRGSFKGDDAAVKVMK---------------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW 444 (669)
Q Consensus 380 G~Vy~g~~~g~~vavK~~~---------------~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 444 (669)
..+|.+.+-|.++.+|.=. ....+|+.++.+++--.|..-+=+..+.+...++|||+++..|.+.
T Consensus 10 a~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~ 89 (204)
T COG3642 10 AIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDA 89 (204)
T ss_pred eeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHH
Confidence 6788888888777776421 1245699999998655544444445577888999999999999999
Q ss_pred HhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 445 LHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 445 l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
+... ...++..+-.-+.-||..+ |+|+||.++||++..+. +.++||||+....
T Consensus 90 l~~~------------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s~ 142 (204)
T COG3642 90 LEEA------------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEFSD 142 (204)
T ss_pred HHhc------------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccccc
Confidence 8643 2456677777778899999 99999999999998655 9999999998543
No 452
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.84 E-value=1.9e-09 Score=123.04 Aligned_cols=222 Identities=19% Similarity=0.252 Sum_probs=152.7
Q ss_pred HHHhcCCCCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEee
Q 005923 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHK 486 (669)
Q Consensus 407 ~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHr 486 (669)
++-..+||-+++..--+.-....+||++|+.+++|...|++.. .++..-.......+..+++|||... +.||
T Consensus 857 ~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~-----~~saepaRs~i~~~vqs~e~L~s~~---r~h~ 928 (1205)
T KOG0606|consen 857 ILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSG-----CLSAEPARSPILERVQSLESLHSSL---RKHR 928 (1205)
T ss_pred ccccCCCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCC-----CcccccccchhHHHHhhhhccccch---hhcc
Confidence 3333456777766655556778899999999999999998652 3444445556777888999999987 8999
Q ss_pred CCCCCCeeecCCCcEEEcccCCccccCCC---------------------cc-ccC-Ccccceeeecccccccccccccc
Q 005923 487 NLKTSNILLDTNLRAKITNFGLARSAESD---------------------EH-EQG-GYGLQLTRHVVGTYGYMAPEYIE 543 (669)
Q Consensus 487 Dik~~NILl~~~~~~kl~DfGla~~~~~~---------------------~~-~~~-~~~~~~~~~~~gt~~y~aPE~l~ 543 (669)
|++|.|.|...++..+++|||.......- .. ... ...........+|..|.+||.+.
T Consensus 929 ~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~l 1008 (1205)
T KOG0606|consen 929 DLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILL 1008 (1205)
T ss_pred cccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccc
Confidence 99999999999999999999843321110 00 000 00011233467899999999999
Q ss_pred cCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccC-CCCcHHHHHHHHHHH
Q 005923 544 NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLR-NEYPLDLAFSMAQLA 622 (669)
Q Consensus 544 ~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~-~~~~~~~~~~l~~li 622 (669)
+......+|+|++|++++|.++|..||....... + .+.+...... ...+......+.+++
T Consensus 1009 g~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~----------~---------f~ni~~~~~~~p~g~~~~s~~aq~~~ 1069 (1205)
T KOG0606|consen 1009 GRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ----------I---------FENILNRDIPWPEGPEEGSYEAQDLI 1069 (1205)
T ss_pred cccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh----------h---------hhccccCCCCCCCCccccChhhhhhh
Confidence 9999999999999999999999999998654321 0 1111111111 233455566788999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHHhhcCCCCCCC
Q 005923 623 KNCTAHDLNARPSISEVFVTLSKIWSSSSDWDP 655 (669)
Q Consensus 623 ~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~ 655 (669)
.+.+..+|.+|-.|.--.+.=.--.....+|+.
T Consensus 1070 ~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1070 NRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWEN 1102 (1205)
T ss_pred hhhhccCchhccCcccccccccCCccCCCCccc
Confidence 999999999998887333322222333455553
No 453
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.83 E-value=3.2e-08 Score=92.58 Aligned_cols=128 Identities=25% Similarity=0.354 Sum_probs=95.0
Q ss_pred eEEEEEEECCCeeEEEEe---------------cccHHHHHHHHHhcCCCCceeEeeEEEecCceeEEEEecCC-CCHHH
Q 005923 380 GSVYRGSFKGDDAAVKVM---------------KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADN-GALSD 443 (669)
Q Consensus 380 G~Vy~g~~~g~~vavK~~---------------~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~-gsL~~ 443 (669)
+.|+++.+.|+...||.- +....+|+++|.+++--.|.--.=++.+...-.++|||+++ .++.+
T Consensus 21 Arv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~ 100 (229)
T KOG3087|consen 21 ARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKD 100 (229)
T ss_pred eeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHH
Confidence 789999999999888752 12355799999988644443333344466677899999976 48889
Q ss_pred HHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCC---cEEEcccCCccccC
Q 005923 444 WLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL---RAKITNFGLARSAE 513 (669)
Q Consensus 444 ~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~---~~kl~DfGla~~~~ 513 (669)
++...- ...-.......++..|-..+.-||..+ ++|+||.++||++..++ .+.++|||++....
T Consensus 101 ~i~~~~---~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~ 167 (229)
T KOG3087|consen 101 FILSTM---EDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSVSR 167 (229)
T ss_pred HHHHHc---cCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhccc
Confidence 887652 122223334678888999999999999 99999999999996554 45899999987653
No 454
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.82 E-value=4.2e-08 Score=100.44 Aligned_cols=126 Identities=13% Similarity=0.196 Sum_probs=96.9
Q ss_pred eEEEEEEECCCeeEEEEecc------------------cHHHHHHHHHhcCCC--CceeEeeEEEe-----cCceeEEEE
Q 005923 380 GSVYRGSFKGDDAAVKVMKG------------------DVSSEINILKKINHS--NIIRLSGFCVH-----EGNTYLVYE 434 (669)
Q Consensus 380 G~Vy~g~~~g~~vavK~~~~------------------~~~~E~~~l~~l~H~--niv~l~g~~~~-----~~~~~lV~e 434 (669)
..|++..++|+.+.||.... .+.+|...+.++... .....+++... ....+||+|
T Consensus 36 rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 36 RRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred ceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 34668888899999996521 256899999888533 34455666543 234689999
Q ss_pred ecCCC-CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecC-------CCcEEEccc
Q 005923 435 FADNG-ALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT-------NLRAKITNF 506 (669)
Q Consensus 435 ~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~-------~~~~kl~Df 506 (669)
++++- +|.+++.... ....+...+..++.+++..+.-||..+ |+|+|++++|||++. +..+.++||
T Consensus 116 ~l~~~~sL~~~~~~~~---~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl 189 (268)
T PRK15123 116 DLAPTISLEDYCADWA---TNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKLSVIDL 189 (268)
T ss_pred eCCCCccHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceEEEEEC
Confidence 99986 8999985421 123456677899999999999999999 999999999999975 468899999
Q ss_pred CCccc
Q 005923 507 GLARS 511 (669)
Q Consensus 507 Gla~~ 511 (669)
+.++.
T Consensus 190 ~r~~~ 194 (268)
T PRK15123 190 HRAQI 194 (268)
T ss_pred Ccccc
Confidence 99864
No 455
>TIGR02899 spore_safA spore coat assembly protein SafA. in which one of which is found in most examples of endospore-forming bacteria. Lysin motifs are repeated in many proteins.
Probab=98.73 E-value=1.2e-08 Score=73.91 Aligned_cols=43 Identities=37% Similarity=0.555 Sum_probs=38.7
Q ss_pred cCCCCCHHHHHHHhCCCHHhHHHhcC-CCCCCCCCCCccccccc
Q 005923 199 VTWGDSISAIAQLFNVDERSVLDANK-LSQDDLIFPFTPILVPL 241 (669)
Q Consensus 199 v~~GDtl~~Ia~~f~v~~~~l~~~N~-l~~~~~l~p~~~l~iP~ 241 (669)
|++|||||+||++||++.++|.++|+ +.++..+++||+|.||.
T Consensus 1 v~~gdtl~~IA~~~~~~~~~l~~~N~~~~~~~~~~~g~~l~ip~ 44 (44)
T TIGR02899 1 VQKGDTLWKIAKKYGVDFDELIQANPQLSNPNLIYPGMKIKIPS 44 (44)
T ss_pred CCCCCCHHHHHHHHCcCHHHHHHHhhcCCCCCCcCCCCEEecCC
Confidence 68999999999999999999999997 54567899999999973
No 456
>PF01476 LysM: LysM domain; InterPro: IPR018392 This domain is about 40 residues long and is found in a variety of enzymes involved in bacterial cell wall degradation []. This domain may have a general peptidoglycan binding function.; GO: 0016998 cell wall macromolecule catabolic process; PDB: 2DJP_A 3ZQD_A 1Y7M_B 4A52_A 2L9Y_A 1E0G_A.
Probab=98.73 E-value=6.6e-09 Score=75.40 Aligned_cols=43 Identities=37% Similarity=0.596 Sum_probs=34.8
Q ss_pred EEEecCCcchhhhHhhhhcCchhHHHHHhcC-CCCCCCCCCCceEEEe
Q 005923 130 YTIQNHVETYLSVANNTYQGLTTCQAMMSQN-PVDSRNLTVGLDLFVP 176 (669)
Q Consensus 130 y~V~~~gdT~~~IA~~~~~~lt~~~~l~~~N-~~~~~~l~~G~~L~ip 176 (669)
|+|+ +|||+|+|| ++|+ ++.++|+++| .+....|.+||+|.||
T Consensus 1 y~V~-~gDtl~~IA-~~~~--~~~~~l~~~N~~~~~~~l~~G~~l~iP 44 (44)
T PF01476_consen 1 YTVQ-PGDTLWSIA-KRYG--ISVDELMELNPNIDSDNLQPGQKLCIP 44 (44)
T ss_dssp EEE--TT--HHHHH-HHTT--S-HHHHHHHCCTTHGGCGGTTEEEEEC
T ss_pred CEEC-cCCcHHHHH-hhhh--hhHhHHHHhcCCCCcccCCCCCEEEeC
Confidence 8999 999999999 7787 8899999999 5555579999999998
No 457
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.72 E-value=7.7e-08 Score=93.02 Aligned_cols=118 Identities=23% Similarity=0.351 Sum_probs=80.6
Q ss_pred EEEEEEE-CCCeeEEEEecc---------------------------------cHHHHHHHHHhcCCC--CceeEeeEEE
Q 005923 381 SVYRGSF-KGDDAAVKVMKG---------------------------------DVSSEINILKKINHS--NIIRLSGFCV 424 (669)
Q Consensus 381 ~Vy~g~~-~g~~vavK~~~~---------------------------------~~~~E~~~l~~l~H~--niv~l~g~~~ 424 (669)
.||.|.. +|..+|||+.+. ...+|.+.|.++..- ++.+.+.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 3888886 678899998641 134699999999765 566676552
Q ss_pred ecCceeEEEEecC--CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHhCCCCCeEeeCCCCCCeeecCCCcE
Q 005923 425 HEGNTYLVYEFAD--NGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNY-LHKYTNPPYVHKNLKTSNILLDTNLRA 501 (669)
Q Consensus 425 ~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~y-LH~~~~~~ivHrDik~~NILl~~~~~~ 501 (669)
...|||||++ +..+..+.... ++......++.+++..+.. +|..+ ++|+||.+.|||++++ .+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-------~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~ 145 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-------LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KV 145 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-------GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-------ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eE
Confidence 5689999998 54554433221 2234456778888886666 57888 9999999999999988 99
Q ss_pred EEcccCCccccC
Q 005923 502 KITNFGLARSAE 513 (669)
Q Consensus 502 kl~DfGla~~~~ 513 (669)
.|+|||.+....
T Consensus 146 ~iIDf~qav~~~ 157 (188)
T PF01163_consen 146 YIIDFGQAVDSS 157 (188)
T ss_dssp EE--GTTEEETT
T ss_pred EEEecCcceecC
Confidence 999999987654
No 458
>PRK14125 cell division suppressor protein YneA; Provisional
Probab=98.70 E-value=2.2e-08 Score=86.12 Aligned_cols=51 Identities=22% Similarity=0.255 Sum_probs=43.4
Q ss_pred EEEEEcCCCCCHHHHHHHhCCC--------HHhHHHhcCCCCCCCCCCCcccccccCCCC
Q 005923 194 LLTYMVTWGDSISAIAQLFNVD--------ERSVLDANKLSQDDLIFPFTPILVPLKTAP 245 (669)
Q Consensus 194 ~~tY~v~~GDtl~~Ia~~f~v~--------~~~l~~~N~l~~~~~l~p~~~l~iP~~~~P 245 (669)
..+|+|++|||||+||++|+.+ ++.|++.|++.+ +.|+|||.|.||....-
T Consensus 36 ~~~~tV~~GDTLW~IA~~y~~~~~l~~~~~v~~I~~~N~l~~-~~I~~Gq~L~IP~~~~~ 94 (103)
T PRK14125 36 YVEITVQEGDTLWALADQYAGKHHMAKNEFIEWVEDVNNLPS-GHIKAGDKLVIPVLKSK 94 (103)
T ss_pred cEEEEECCCCCHHHHHHHhCCCcCCCHHHHHHHHHHhcCCCC-CcCCCCCEEEEecCCCC
Confidence 3689999999999999999876 567788899954 57999999999987644
No 459
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.70 E-value=7.5e-09 Score=112.66 Aligned_cols=233 Identities=22% Similarity=0.229 Sum_probs=162.4
Q ss_pred HHHhCCCCcccceeeEEEEEEE---CCCeeEEEEeccc---------HHHHHHHHHhc-CCCCceeEeeEEEecCceeEE
Q 005923 366 KIATGSFSEENRIQGSVYRGSF---KGDDAAVKVMKGD---------VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLV 432 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~---~g~~vavK~~~~~---------~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 432 (669)
+++.|.| +.|+.... ++..+++|.+... -..|+.+...+ .|.++++....+......|+=
T Consensus 272 ~i~~~~~-------~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip 344 (524)
T KOG0601|consen 272 KISDGNF-------SSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIP 344 (524)
T ss_pred EccCCcc-------ccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCc
Confidence 3677777 56666554 3556777766432 12466565555 488889888888788888899
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCC-CcEEEcccCCccc
Q 005923 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN-LRAKITNFGLARS 511 (669)
Q Consensus 433 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~-~~~kl~DfGla~~ 511 (669)
-||++++++.....- ...+....++++..|++.++.++|+.. ++|+|+||+||++..+ +..++.|||....
T Consensus 345 ~e~~~~~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 345 LEFCEGGSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred hhhhcCcchhhhhHH-----HHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccccc
Confidence 999999988877632 234777888999999999999999988 9999999999999876 8889999999875
Q ss_pred cCCCccccCCcccceeeeccccccc-ccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHh
Q 005923 512 AESDEHEQGGYGLQLTRHVVGTYGY-MAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590 (669)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~gt~~y-~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 590 (669)
+..... -....+..| .+++..+...+-.+.|+||||.-+.|.+++...-.....
T Consensus 417 ~~~~~~----------~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~--------------- 471 (524)
T KOG0601|consen 417 LAFSSG----------VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ--------------- 471 (524)
T ss_pred cceecc----------cccccccccccchhhccccccccccccccccccccccccCcccCccccc---------------
Confidence 322110 001122233 366666778888999999999999999988654332110
Q ss_pred hhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005923 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKIW 647 (669)
Q Consensus 591 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 647 (669)
...+....+ ...+... ..+..+.+.++..++..||.+.++........
T Consensus 472 -------~~~i~~~~~-p~~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 472 -------SLTIRSGDT-PNLPGLK-LQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred -------ceeeecccc-cCCCchH-HhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 000000000 1112222 56778889999999999999998877655443
No 460
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.61 E-value=1.3e-08 Score=112.32 Aligned_cols=157 Identities=22% Similarity=0.348 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCcc-ccCCcccceeeeccccccccccccccc
Q 005923 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH-EQGGYGLQLTRHVVGTYGYMAPEYIEN 544 (669)
Q Consensus 466 ~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~~~~gt~~y~aPE~l~~ 544 (669)
.++++||.|+|.. +.+||++|.|++|.++.++..||+.|+.+........ ....++..+.--..-...|.|||++.+
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3455999999975 4599999999999999999999999998876544211 111111122222344567999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHH
Q 005923 545 GVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAK 623 (669)
Q Consensus 545 ~~~s~~sDV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~ 623 (669)
...+.++|+||+|++++.+.. |+..+......... .. ....+..-...++.+++.++.+-+.
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~----~~-------------~~~~~~~~~~~~s~~~p~el~~~l~ 246 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY----SF-------------SRNLLNAGAFGYSNNLPSELRESLK 246 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchh----hh-------------hhcccccccccccccCcHHHHHHHH
Confidence 889999999999999999994 55544433221111 11 1111111112344667788999999
Q ss_pred HhcccCCCCCCCHHHHHH
Q 005923 624 NCTAHDLNARPSISEVFV 641 (669)
Q Consensus 624 ~Cl~~dP~~RPt~~evl~ 641 (669)
+++..++..||++.++..
T Consensus 247 k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 247 KLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred HHhcCCcccCcchhhhhc
Confidence 999999999998887654
No 461
>cd00118 LysM Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function.
Probab=98.61 E-value=6e-08 Score=70.08 Aligned_cols=45 Identities=33% Similarity=0.469 Sum_probs=42.3
Q ss_pred EEEcCCCCCHHHHHHHhCCCHHhHHHhcCCCCCCCCCCCcccccc
Q 005923 196 TYMVTWGDSISAIAQLFNVDERSVLDANKLSQDDLIFPFTPILVP 240 (669)
Q Consensus 196 tY~v~~GDtl~~Ia~~f~v~~~~l~~~N~l~~~~~l~p~~~l~iP 240 (669)
+|+|++|||+++||++|+++..+|.++|+......+.+|+.+.||
T Consensus 2 ~~~v~~gdt~~~ia~~~~~~~~~~~~~N~~~~~~~~~~g~~l~ip 46 (46)
T cd00118 2 TYTVKKGDTLSSIAQRYGISVEELLKLNGLSDPDNLQVGQKLKIP 46 (46)
T ss_pred EEEECCCCCHHHHHHHHCcCHHHHHHHcCCCCccccCCCCEEecC
Confidence 699999999999999999999999999998667889999999887
No 462
>PRK14125 cell division suppressor protein YneA; Provisional
Probab=98.55 E-value=2.5e-07 Score=79.62 Aligned_cols=54 Identities=13% Similarity=0.221 Sum_probs=46.1
Q ss_pred cceeeeeecCCCCCCHHHHHHhhCCCC--------hHHHhhhcCCCCCCCCCCCCCcEEEeeeccc
Q 005923 58 CQAYLTFRSNPSYNTPVTIDYLFKTSH--------PNLIASINSITNVTATLPTDTPVLIPVNCSC 115 (669)
Q Consensus 58 c~~~~~y~~~~~g~tl~~Ia~~~~~~~--------~~~i~~~N~~~~~~~~l~~gq~l~IP~~c~c 115 (669)
+..|..|+|++ |||||+||+.|+ .+ +..|++.|++. ++.|.+||.|.||+.-+-
T Consensus 33 ~~~~~~~tV~~-GDTLW~IA~~y~-~~~~l~~~~~v~~I~~~N~l~--~~~I~~Gq~L~IP~~~~~ 94 (103)
T PRK14125 33 KNQYVEITVQE-GDTLWALADQYA-GKHHMAKNEFIEWVEDVNNLP--SGHIKAGDKLVIPVLKSK 94 (103)
T ss_pred CCCcEEEEECC-CCCHHHHHHHhC-CCcCCCHHHHHHHHHHhcCCC--CCcCCCCCEEEEecCCCC
Confidence 45688899999 999999999998 65 57888999994 567999999999987653
No 463
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.42 E-value=2.1e-06 Score=89.69 Aligned_cols=205 Identities=17% Similarity=0.222 Sum_probs=133.0
Q ss_pred eeEEEEecCCC-CHHHHHh-cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEccc
Q 005923 429 TYLVYEFADNG-ALSDWLH-SNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506 (669)
Q Consensus 429 ~~lV~e~~~~g-sL~~~l~-~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 506 (669)
.-++|..+.+. -...+++ ..|.+......|...+++++.+|.+.+-||..| .+-+|+.++|+|+.+++.+.+.|-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVds 161 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDS 161 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcc
Confidence 56777777764 2223322 123345567899999999999999999999999 999999999999999999999874
Q ss_pred CCccccCCCccccCCcccceeeecccccccccccccc-----cCCCCchhhHHHHHHHHHHHHcC-CCCCCCCchhH-HH
Q 005923 507 GLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE-----NGVITPKLDVFAFGVVVLELLSG-REAVTGDQNCE-AE 579 (669)
Q Consensus 507 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~s~~sDV~S~Gvvl~elltg-~~p~~~~~~~~-~~ 579 (669)
........ .......+|...|.+||.-. +..-+...|-|.+|+++++++.| +.||.|..-.. +-
T Consensus 162 Dsfqi~~n---------g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap 232 (637)
T COG4248 162 DSFQINAN---------GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAP 232 (637)
T ss_pred cceeeccC---------CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCC
Confidence 43332221 12345568899999999765 34557789999999999999886 89997532110 00
Q ss_pred HHHH-HHH-HHHhhhhHHhhhhcccCCccCCCCc-HHHHHHHHHHHHHhcccC--CCCCCCHHHHHHHHHHhhcC
Q 005923 580 LLYA-SIS-RVLEESNVREKLRGFIDPSLRNEYP-LDLAFSMAQLAKNCTAHD--LNARPSISEVFVTLSKIWSS 649 (669)
Q Consensus 580 ~~~~-~~~-~~~~~~~~~~~l~~~~d~~l~~~~~-~~~~~~l~~li~~Cl~~d--P~~RPt~~evl~~L~~i~~~ 649 (669)
...+ .|. ..+.... +.-.....+ - ...| .-++..+..|..+|+... +.-|||.+--+..|..+.++
T Consensus 233 ~p~E~~Ia~g~f~ya~--~~~~g~~p~-P-~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 233 NPLETDIAHGRFAYAS--DQRRGLKPP-P-RSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred Ccchhhhhcceeeech--hccCCCCCC-C-CCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 0000 110 0000000 000011111 0 1122 234566778888998653 56899999988888777654
No 464
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.42 E-value=3.3e-06 Score=83.42 Aligned_cols=106 Identities=22% Similarity=0.245 Sum_probs=84.9
Q ss_pred cHHHHHHHHHhcC--CCCceeEeeEEEecC----ceeEEEEecCCC-CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHH
Q 005923 400 DVSSEINILKKIN--HSNIIRLSGFCVHEG----NTYLVYEFADNG-ALSDWLHSNRYQTSDNLTWKQRVQIAYDVANAL 472 (669)
Q Consensus 400 ~~~~E~~~l~~l~--H~niv~l~g~~~~~~----~~~lV~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L 472 (669)
...+|...+.++. .-.+.+.+++..... ..+||+|++++- +|.+++.... .++......++.+++..+
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~-----~~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE-----QLDPSQRRELLRALARLI 131 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc-----ccchhhHHHHHHHHHHHH
Confidence 4667888888885 344566777766532 358999999984 8999997631 255667889999999999
Q ss_pred HHHHhCCCCCeEeeCCCCCCeeecCCC---cEEEcccCCccccC
Q 005923 473 NYLHKYTNPPYVHKNLKTSNILLDTNL---RAKITNFGLARSAE 513 (669)
Q Consensus 473 ~yLH~~~~~~ivHrDik~~NILl~~~~---~~kl~DfGla~~~~ 513 (669)
.-||+.+ |+|+|+++.|||++.+. .+.++||+.++...
T Consensus 132 ~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 132 AKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 9999999 99999999999998887 89999999887543
No 465
>TIGR02907 spore_VI_D stage VI sporulation protein D. SpoVID, the stage VI sporulation protein D, is restricted to endospore-forming members of the bacteria, all of which are found among the Firmicutes. It is widely distributed but not quite universal in this group. Between well-conserved N-terminal and C-terminal domains is a poorly conserved, low-complexity region of variable length, rich enough in glutamic acid to cause spurious BLAST search results unless a filter is used. The seed alignment for this model was trimmed, in effect, by choosing member sequences in which these regions are relatively short. SpoVID is involved in spore coat assembly by the mother cell compartment late in the process of sporulation.
Probab=98.41 E-value=2.7e-07 Score=93.79 Aligned_cols=46 Identities=24% Similarity=0.357 Sum_probs=43.4
Q ss_pred EEEEEcCCCCCHHHHHHHhCCCHHhHHHhcCCCCCCCCCCCcccccc
Q 005923 194 LLTYMVTWGDSISAIAQLFNVDERSVLDANKLSQDDLIFPFTPILVP 240 (669)
Q Consensus 194 ~~tY~v~~GDtl~~Ia~~f~v~~~~l~~~N~l~~~~~l~p~~~l~iP 240 (669)
..+|+|++|||||+||+|||++++.|+++|++. ++.|++|+.|+||
T Consensus 293 ~~~YiVq~GDTL~sIAkRYGVSV~~L~r~N~L~-~~~L~~GQ~L~IP 338 (338)
T TIGR02907 293 LRMCIVQEGDTIETIAERYEISVSQLIRHNQLE-DFEVNEGQILYIP 338 (338)
T ss_pred cEEEEECCCCCHHHHHHHHCcCHHHHHHHhCCC-ccccCCCCEEEeC
Confidence 458999999999999999999999999999996 7899999999997
No 466
>PRK10871 nlpD lipoprotein NlpD; Provisional
Probab=98.40 E-value=2.4e-07 Score=95.42 Aligned_cols=48 Identities=23% Similarity=0.178 Sum_probs=45.7
Q ss_pred EEEcCCCCCHHHHHHHhCCCHHhHHHhcCCCCCCCCCCCcccccccCC
Q 005923 196 TYMVTWGDSISAIAQLFNVDERSVLDANKLSQDDLIFPFTPILVPLKT 243 (669)
Q Consensus 196 tY~v~~GDtl~~Ia~~f~v~~~~l~~~N~l~~~~~l~p~~~l~iP~~~ 243 (669)
+|+|++|||||.||.+||++..+|.+||+|.++..|++||.|.+|...
T Consensus 62 ~y~Vk~GDTL~~IA~~~g~~~~~La~~N~l~~p~~I~~GQ~L~i~~~~ 109 (319)
T PRK10871 62 TYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYSLNVGQTLQVGNAS 109 (319)
T ss_pred ceEECCCCHHHHHHHHHCcCHHHHHHhcCCCCCccccCCCEEEeCCCC
Confidence 799999999999999999999999999999999999999999998654
No 467
>COG3858 Predicted glycosyl hydrolase [General function prediction only]
Probab=98.37 E-value=4.4e-07 Score=94.76 Aligned_cols=98 Identities=18% Similarity=0.161 Sum_probs=81.5
Q ss_pred EEEEecCCcchhhhHhhhhcCchhHHHHHhcCCCCCCCCCCCceEEEeeecCCCCcccccCCceEEEEEEcCCCCCHHHH
Q 005923 129 TYTIQNHVETYLSVANNTYQGLTTCQAMMSQNPVDSRNLTVGLDLFVPLRCACPSRDQAASGFNHLLTYMVTWGDSISAI 208 (669)
Q Consensus 129 ~y~V~~~gdT~~~IA~~~~~~lt~~~~l~~~N~~~~~~l~~G~~L~ip~~c~c~~~~~~~~~~~~~~tY~v~~GDtl~~I 208 (669)
.|.|+ +||+.+.|| .+|. .+...|...|.+..+.|.+||.+.||.. -..|.|++||++++|
T Consensus 3 i~~~~-pg~~~~~i~-~~~~--~~~~~i~~~~~~~~d~~~~~q~~~v~~~---------------~~~y~~~~~d~~~Si 63 (423)
T COG3858 3 IHLVG-PGDSRLIIA-VYFP--YTNNRIVNGNDYTNDDLVDGQTFVVPPS---------------GHFYDVGPGDTLTSI 63 (423)
T ss_pred EEEcc-CCceeeeeh-hhcc--ccccccccccccccccccCceeEEECCc---------------ceEEEecCCcchhhh
Confidence 58899 999999999 5666 4445554555444468999999999963 248999999999999
Q ss_pred HHHhCCCHHhHHHhcCCCCCCCCCCCcccccccCCCC
Q 005923 209 AQLFNVDERSVLDANKLSQDDLIFPFTPILVPLKTAP 245 (669)
Q Consensus 209 a~~f~v~~~~l~~~N~l~~~~~l~p~~~l~iP~~~~P 245 (669)
|++|+|+.+.+...|....+..+++|-.+.+|-....
T Consensus 64 a~~~~vt~~~~~~m~~~~~~~~l~~~~~l~~P~~~~~ 100 (423)
T COG3858 64 ARTVGVTQDSAAIMNFVICPGYLQYGLNLYIPSARKT 100 (423)
T ss_pred hhhhcCCHHHHHhhcccccccceeeeeEEeccCCCCC
Confidence 9999999999999998877888999999999877654
No 468
>PRK09902 hypothetical protein; Provisional
Probab=98.35 E-value=1e-05 Score=78.92 Aligned_cols=127 Identities=17% Similarity=0.161 Sum_probs=97.2
Q ss_pred eEEEEEEECCCeeEEEEec-------------ccHHHHHHHHHhcCC--CCceeEeeEEEecC----ceeEEEEecCC-C
Q 005923 380 GSVYRGSFKGDDAAVKVMK-------------GDVSSEINILKKINH--SNIIRLSGFCVHEG----NTYLVYEFADN-G 439 (669)
Q Consensus 380 G~Vy~g~~~g~~vavK~~~-------------~~~~~E~~~l~~l~H--~niv~l~g~~~~~~----~~~lV~e~~~~-g 439 (669)
.-|++-.++|+.+-+|... ..|.+|+..|.++.. -.+.+.+....... ..+||+|-+.+ -
T Consensus 32 SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~ 111 (216)
T PRK09902 32 SGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFI 111 (216)
T ss_pred ceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEeCCCCc
Confidence 5688888888888888764 247789999999853 33555552222221 35899998764 4
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCc--EEEcccCCcccc
Q 005923 440 ALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLR--AKITNFGLARSA 512 (669)
Q Consensus 440 sL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~--~kl~DfGla~~~ 512 (669)
+|.+++... .....+...+..+..+++..+.-||+.+ +.|+|+.+.|||++.++. ++++||--++..
T Consensus 112 ~L~~~l~~~---~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 112 SIADWYAQH---AVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred cHHHHHhcC---CcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 999998653 2234677788899999999999999999 999999999999986666 999999877653
No 469
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.31 E-value=2.6e-06 Score=94.52 Aligned_cols=133 Identities=23% Similarity=0.304 Sum_probs=88.9
Q ss_pred HHHhCCCCcccceeeEEEEEEEC-CCeeEEEEecc---------------------------------------------
Q 005923 366 KIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMKG--------------------------------------------- 399 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~-g~~vavK~~~~--------------------------------------------- 399 (669)
-+|.++- |.||+|++. |+.||||+.+.
T Consensus 132 PiAsASI-------aQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ 204 (517)
T COG0661 132 PIASASI-------AQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE 204 (517)
T ss_pred chhhhhH-------hhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence 4666666 999999996 99999999752
Q ss_pred --cHHHHHHHHHhcC----CCCceeEeeEEE-ecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHH-
Q 005923 400 --DVSSEINILKKIN----HSNIIRLSGFCV-HEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANA- 471 (669)
Q Consensus 400 --~~~~E~~~l~~l~----H~niv~l~g~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~- 471 (669)
|+..|..-+.+++ +..-+++=.+++ ..+...|+|||++|-.+.+...... ..++.+ .++..++.+
T Consensus 205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~----~g~d~k---~ia~~~~~~f 277 (517)
T COG0661 205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS----AGIDRK---ELAELLVRAF 277 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh----cCCCHH---HHHHHHHHHH
Confidence 1233555555542 222233333333 3467799999999998888843221 224433 333333333
Q ss_pred HHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCC
Q 005923 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515 (669)
Q Consensus 472 L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~ 515 (669)
+..+=..+ ++|.|..|.||+++.++++.+.|||+.......
T Consensus 278 ~~q~~~dg---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 278 LRQLLRDG---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred HHHHHhcC---ccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 22233356 999999999999999999999999999877654
No 470
>smart00257 LysM Lysin motif.
Probab=98.27 E-value=1.1e-06 Score=62.47 Aligned_cols=44 Identities=25% Similarity=0.400 Sum_probs=39.5
Q ss_pred EEEcCCCCCHHHHHHHhCCCHHhHHHhcCCCCCCCCCCCccccc
Q 005923 196 TYMVTWGDSISAIAQLFNVDERSVLDANKLSQDDLIFPFTPILV 239 (669)
Q Consensus 196 tY~v~~GDtl~~Ia~~f~v~~~~l~~~N~l~~~~~l~p~~~l~i 239 (669)
+|.|++|||+++||++|+++..++.++|+......+.+|+.+.+
T Consensus 1 ~~~v~~gdt~~~ia~~~~~~~~~~~~~N~~~~~~~~~~g~~l~i 44 (44)
T smart00257 1 TYTVKKGDTLSSIARRYGISVSDLLELNNILDPDNLQVGQKLKI 44 (44)
T ss_pred CeEeCCCCCHHHHHHHhCCCHHHHHHHcCCCCccccCCCCEEeC
Confidence 48999999999999999999999999999656678999998754
No 471
>COG3858 Predicted glycosyl hydrolase [General function prediction only]
Probab=98.16 E-value=1.7e-06 Score=90.36 Aligned_cols=94 Identities=23% Similarity=0.250 Sum_probs=82.0
Q ss_pred eeeecCCCCCCHHHHHHhhCCCChHHHhhhcCCCCCCCCCCCCCcEEEeeecccCCCCCCcceeeeeEEEEecCCcchhh
Q 005923 62 LTFRSNPSYNTPVTIDYLFKTSHPNLIASINSITNVTATLPTDTPVLIPVNCSCSGGGDGDYYQFNTTYTIQNHVETYLS 141 (669)
Q Consensus 62 ~~y~~~~~g~tl~~Ia~~~~~~~~~~i~~~N~~~~~~~~l~~gq~l~IP~~c~c~~~~~~~~~~~~~~y~V~~~gdT~~~ 141 (669)
.+|.++| ||++..|+.+|+ .+..+|...|.+. . +.+.+||.++||..- ..|.|+ +|||+++
T Consensus 2 ~i~~~~p-g~~~~~i~~~~~-~~~~~i~~~~~~~-~-d~~~~~q~~~v~~~~--------------~~y~~~-~~d~~~S 62 (423)
T COG3858 2 SIHLVGP-GDSRLIIAVYFP-YTNNRIVNGNDYT-N-DDLVDGQTFVVPPSG--------------HFYDVG-PGDTLTS 62 (423)
T ss_pred EEEEccC-Cceeeeehhhcc-ccccccccccccc-c-ccccCceeEEECCcc--------------eEEEec-CCcchhh
Confidence 4688888 999999999999 9999998888886 4 999999999999543 479999 9999999
Q ss_pred hHhhhhcCchhHHHHHhcCCCC-CCCCCCCceEEEee
Q 005923 142 VANNTYQGLTTCQAMMSQNPVD-SRNLTVGLDLFVPL 177 (669)
Q Consensus 142 IA~~~~~~lt~~~~l~~~N~~~-~~~l~~G~~L~ip~ 177 (669)
|| .++. +|.+.+...|... +..|.+|-.|.+|-
T Consensus 63 ia-~~~~--vt~~~~~~m~~~~~~~~l~~~~~l~~P~ 96 (423)
T COG3858 63 IA-RTVG--VTQDSAAIMNFVICPGYLQYGLNLYIPS 96 (423)
T ss_pred hh-hhhc--CCHHHHHhhcccccccceeeeeEEeccC
Confidence 99 7777 8888898888765 45899999999984
No 472
>PRK13914 invasion associated secreted endopeptidase; Provisional
Probab=98.11 E-value=2.4e-06 Score=92.11 Aligned_cols=47 Identities=30% Similarity=0.291 Sum_probs=43.5
Q ss_pred EEEcCCCCCHHHHHHHhCCCHHhHHHhcCCCCCCCCCCCcccccccCC
Q 005923 196 TYMVTWGDSISAIAQLFNVDERSVLDANKLSQDDLIFPFTPILVPLKT 243 (669)
Q Consensus 196 tY~v~~GDtl~~Ia~~f~v~~~~l~~~N~l~~~~~l~p~~~l~iP~~~ 243 (669)
+|.|++|||||.||++||+++++|+++|++. ++.|+|||.|.||...
T Consensus 29 tytVq~GDTLw~IA~~ygvtv~~I~~~N~l~-~~~I~~Gq~L~Ip~~~ 75 (481)
T PRK13914 29 TVVVEAGDTLWGIAQSKGTTVDAIKKANNLT-TDKIVPGQKLQVNEVA 75 (481)
T ss_pred eEEECCCCCHHHHHHHHCCCHHHHHHHhCCC-cccccCCCEEEeCCCC
Confidence 6999999999999999999999999999994 6789999999999654
No 473
>TIGR02899 spore_safA spore coat assembly protein SafA. in which one of which is found in most examples of endospore-forming bacteria. Lysin motifs are repeated in many proteins.
Probab=98.10 E-value=3.9e-06 Score=60.50 Aligned_cols=43 Identities=12% Similarity=0.080 Sum_probs=37.4
Q ss_pred cCCCCCCHHHHHHhhCCCChHHHhhhcC-CCCCCCCCCCCCcEEEee
Q 005923 66 SNPSYNTPVTIDYLFKTSHPNLIASINS-ITNVTATLPTDTPVLIPV 111 (669)
Q Consensus 66 ~~~~g~tl~~Ia~~~~~~~~~~i~~~N~-~~~~~~~l~~gq~l~IP~ 111 (669)
|++ ||||++||+.|| ++..+|+++|+ +. +...+.+||.|.||.
T Consensus 1 v~~-gdtl~~IA~~~~-~~~~~l~~~N~~~~-~~~~~~~g~~l~ip~ 44 (44)
T TIGR02899 1 VQK-GDTLWKIAKKYG-VDFDELIQANPQLS-NPNLIYPGMKIKIPS 44 (44)
T ss_pred CCC-CCCHHHHHHHHC-cCHHHHHHHhhcCC-CCCCcCCCCEEecCC
Confidence 455 999999999999 99999999996 53 457899999999983
No 474
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.09 E-value=1.2e-05 Score=77.91 Aligned_cols=105 Identities=18% Similarity=0.265 Sum_probs=83.0
Q ss_pred HHHHHHHhcCC-CCceeEeeEEEecCceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 005923 403 SEINILKKINH-SNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNP 481 (669)
Q Consensus 403 ~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~ 481 (669)
.|.-+|+.+++ +++.+++|+| ..++|.||...+++...-.. ....-.-+|..|.+||.++++.+++|++....
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~--l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRP--LSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCccccccccc--cccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 48888998976 6999999999 45789999987765421000 00112368999999999999999999986555
Q ss_pred CeEeeCCCCCCeeecCCCcEEEcccCCccccC
Q 005923 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513 (669)
Q Consensus 482 ~ivHrDik~~NILl~~~~~~kl~DfGla~~~~ 513 (669)
.+...|++++|+-+++++++|+.|...+....
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence 58899999999999999999999998776543
No 475
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.06 E-value=1.8e-05 Score=79.04 Aligned_cols=118 Identities=18% Similarity=0.208 Sum_probs=86.9
Q ss_pred eEEEEEEE-CCCeeEEEEecc-----------------------------cHHHHHHHHHhcCCC--CceeEeeEEEecC
Q 005923 380 GSVYRGSF-KGDDAAVKVMKG-----------------------------DVSSEINILKKINHS--NIIRLSGFCVHEG 427 (669)
Q Consensus 380 G~Vy~g~~-~g~~vavK~~~~-----------------------------~~~~E~~~l~~l~H~--niv~l~g~~~~~~ 427 (669)
+.||.|.. +|.++|||.=+. ...+|.++|.++.-. .|.+.+++ +
T Consensus 105 sdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~P~~~----n 180 (304)
T COG0478 105 SDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPKPIAW----N 180 (304)
T ss_pred ceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCCCcccc----c
Confidence 78999998 599999996431 134799999998654 67777654 4
Q ss_pred ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 428 NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 428 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
...+||||+++--|...- ++-...-.|+..|+.-+.-+-..| +||+|+..-||++++||.+.++||-
T Consensus 181 RHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~dg~~~vIDwP 247 (304)
T COG0478 181 RHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTEDGDIVVIDWP 247 (304)
T ss_pred cceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecCCCEEEEeCc
Confidence 678999999985554321 123334455566666666666778 9999999999999999999999997
Q ss_pred CccccCC
Q 005923 508 LARSAES 514 (669)
Q Consensus 508 la~~~~~ 514 (669)
-+.....
T Consensus 248 Q~v~~~h 254 (304)
T COG0478 248 QAVPISH 254 (304)
T ss_pred ccccCCC
Confidence 7765543
No 476
>PRK10871 nlpD lipoprotein NlpD; Provisional
Probab=98.01 E-value=1.3e-05 Score=82.80 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=44.3
Q ss_pred eeecCCCCCCHHHHHHhhCCCChHHHhhhcCCCCCCCCCCCCCcEEEeee
Q 005923 63 TFRSNPSYNTPVTIDYLFKTSHPNLIASINSITNVTATLPTDTPVLIPVN 112 (669)
Q Consensus 63 ~y~~~~~g~tl~~Ia~~~~~~~~~~i~~~N~~~~~~~~l~~gq~l~IP~~ 112 (669)
.|+|++ ||||+.||..|| +++.+|+++|+|. ++..|.+||.|.||.+
T Consensus 62 ~y~Vk~-GDTL~~IA~~~g-~~~~~La~~N~l~-~p~~I~~GQ~L~i~~~ 108 (319)
T PRK10871 62 TYTVKK-GDTLFYIAWITG-NDFRDLAQRNNIQ-APYSLNVGQTLQVGNA 108 (319)
T ss_pred ceEECC-CCHHHHHHHHHC-cCHHHHHHhcCCC-CCccccCCCEEEeCCC
Confidence 599999 999999999999 9999999999997 7899999999999854
No 477
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.01 E-value=5.3e-05 Score=76.86 Aligned_cols=131 Identities=14% Similarity=0.158 Sum_probs=83.9
Q ss_pred eEEEEEEECCCeeEEEEecc----cHHHHHHHHHhcC-CCCceeEeeEEEecCceeEEEEecCCCCHHHHH---------
Q 005923 380 GSVYRGSFKGDDAAVKVMKG----DVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL--------- 445 (669)
Q Consensus 380 G~Vy~g~~~g~~vavK~~~~----~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l--------- 445 (669)
..||+...++..+.||.... ++.+|+++++.+. +--+.+++++...++..++|||+++|.+|.+..
T Consensus 13 ~~v~~~~~~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~ 92 (244)
T cd05150 13 ATVYRLDGKNPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWEELEPERLV 92 (244)
T ss_pred CeEEEEcCCCCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhhcccCHHHHH
Confidence 57999988777888998865 4889999999884 444667788776666789999999987776432
Q ss_pred ----------hcCCCCCCCCCC--HHHHHHHHH--------------------HHHHHHHHHHh----CCCCCeEeeCCC
Q 005923 446 ----------HSNRYQTSDNLT--WKQRVQIAY--------------------DVANALNYLHK----YTNPPYVHKNLK 489 (669)
Q Consensus 446 ----------~~~~~~~~~~l~--~~~~~~i~~--------------------qia~~L~yLH~----~~~~~ivHrDik 489 (669)
|.-. .....+. ......... .+...+..|-. ...+.++|+|+.
T Consensus 93 ~~l~~~l~~lH~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~ 171 (244)
T cd05150 93 DALAEALRRLHALP-VADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDLVVTHGDAC 171 (244)
T ss_pred HHHHHHHHHHhcCC-cccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCceEEECCCCC
Confidence 1110 0000111 001110000 01111222211 123569999999
Q ss_pred CCCeeecCCCcEEEcccCCccc
Q 005923 490 TSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 490 ~~NILl~~~~~~kl~DfGla~~ 511 (669)
+.|||++++....|+||+.+..
T Consensus 172 ~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 172 LPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred CccEEEeCCcEEEEEEcccccc
Confidence 9999999987788999998753
No 478
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.98 E-value=6.8e-05 Score=75.12 Aligned_cols=132 Identities=17% Similarity=0.238 Sum_probs=81.0
Q ss_pred HHhCCCCcccceeeEEEEEEECCCeeEEEEecc-----cHHHHHHHHHhcCCCC--ceeEeeEEEecCceeEEEEecCCC
Q 005923 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG-----DVSSEINILKKINHSN--IIRLSGFCVHEGNTYLVYEFADNG 439 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~-----~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~lV~e~~~~g 439 (669)
++.|.- +.||+. .|...++|.... +..+|.++++.+..-. +.+.++++...+...+|||+++|.
T Consensus 9 i~~G~t-------~~~y~~--~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~ 79 (226)
T TIGR02172 9 TGEGGN-------GESYTH--KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK 79 (226)
T ss_pred ecCCCC-------cceeEe--cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence 566766 788983 355677888654 4778999999986443 467788877777788999999986
Q ss_pred C-HHHHH---------------------hcCCCCCCCCCCHHHHH-HHHH----------HHHH-HHHHHHhC-CCCCeE
Q 005923 440 A-LSDWL---------------------HSNRYQTSDNLTWKQRV-QIAY----------DVAN-ALNYLHKY-TNPPYV 484 (669)
Q Consensus 440 s-L~~~l---------------------~~~~~~~~~~l~~~~~~-~i~~----------qia~-~L~yLH~~-~~~~iv 484 (669)
. +...+ |.-. .......... ++.. ++.. ...+|... ..+.++
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~---~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 156 (226)
T TIGR02172 80 RSFSRIISDNPSRLEEIAKIFAEMAKKLHSTK---CDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCL 156 (226)
T ss_pred cchhhhhcCCHHHHHHHHHHHHHHHHHHhCCC---CCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceE
Confidence 3 22111 1110 0011111100 0100 0111 12223221 234589
Q ss_pred eeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 485 HKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 485 HrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
|+|+.|.||++++++ +.|+||+.+..
T Consensus 157 HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 157 HGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred ecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 999999999999888 99999998864
No 479
>PRK11198 LysM domain/BON superfamily protein; Provisional
Probab=97.98 E-value=6.8e-06 Score=76.22 Aligned_cols=46 Identities=35% Similarity=0.491 Sum_probs=41.0
Q ss_pred EEEEcCCCCCHHHHHHHhCC---CHHhHHHhcC--CCCCCCCCCCcccccc
Q 005923 195 LTYMVTWGDSISAIAQLFNV---DERSVLDANK--LSQDDLIFPFTPILVP 240 (669)
Q Consensus 195 ~tY~v~~GDtl~~Ia~~f~v---~~~~l~~~N~--l~~~~~l~p~~~l~iP 240 (669)
.+|+|++|||||+||++|.. ....|.++|+ +..++.|+|||.|.||
T Consensus 96 ~~y~Vk~GDTL~~IA~~~~g~~~~~~~I~~~N~~~l~~~~~I~pGq~L~IP 146 (147)
T PRK11198 96 QFYTVKSGDTLSAIAKKVYGNANKYNKIFEANKPMLKSPDKIYPGQVLRIP 146 (147)
T ss_pred eEEEECCCCCHHHHHHHHcCChhhHHHHHHhhhhcCCCcCCcCcCCEEecC
Confidence 47999999999999999954 4679999998 7778899999999987
No 480
>cd00118 LysM Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function.
Probab=97.97 E-value=1.2e-05 Score=57.77 Aligned_cols=45 Identities=16% Similarity=0.214 Sum_probs=41.2
Q ss_pred eeecCCCCCCHHHHHHhhCCCChHHHhhhcCCCCCCCCCCCCCcEEEe
Q 005923 63 TFRSNPSYNTPVTIDYLFKTSHPNLIASINSITNVTATLPTDTPVLIP 110 (669)
Q Consensus 63 ~y~~~~~g~tl~~Ia~~~~~~~~~~i~~~N~~~~~~~~l~~gq~l~IP 110 (669)
.|++++ |||+++||..|+ ++..+|+++|+.. ....+.+|+.|.||
T Consensus 2 ~~~v~~-gdt~~~ia~~~~-~~~~~~~~~N~~~-~~~~~~~g~~l~ip 46 (46)
T cd00118 2 TYTVKK-GDTLSSIAQRYG-ISVEELLKLNGLS-DPDNLQVGQKLKIP 46 (46)
T ss_pred EEEECC-CCCHHHHHHHHC-cCHHHHHHHcCCC-CccccCCCCEEecC
Confidence 488998 999999999999 9999999999885 56789999999987
No 481
>TIGR02907 spore_VI_D stage VI sporulation protein D. SpoVID, the stage VI sporulation protein D, is restricted to endospore-forming members of the bacteria, all of which are found among the Firmicutes. It is widely distributed but not quite universal in this group. Between well-conserved N-terminal and C-terminal domains is a poorly conserved, low-complexity region of variable length, rich enough in glutamic acid to cause spurious BLAST search results unless a filter is used. The seed alignment for this model was trimmed, in effect, by choosing member sequences in which these regions are relatively short. SpoVID is involved in spore coat assembly by the mother cell compartment late in the process of sporulation.
Probab=97.89 E-value=1.3e-05 Score=81.78 Aligned_cols=47 Identities=13% Similarity=0.057 Sum_probs=44.1
Q ss_pred eeeeeecCCCCCCHHHHHHhhCCCChHHHhhhcCCCCCCCCCCCCCcEEEe
Q 005923 60 AYLTFRSNPSYNTPVTIDYLFKTSHPNLIASINSITNVTATLPTDTPVLIP 110 (669)
Q Consensus 60 ~~~~y~~~~~g~tl~~Ia~~~~~~~~~~i~~~N~~~~~~~~l~~gq~l~IP 110 (669)
.|.+|+|++ ||||++||++|| +++..|+++|++. .+.|.+||.|+||
T Consensus 292 ~~~~YiVq~-GDTL~sIAkRYG-VSV~~L~r~N~L~--~~~L~~GQ~L~IP 338 (338)
T TIGR02907 292 KLRMCIVQE-GDTIETIAERYE-ISVSQLIRHNQLE--DFEVNEGQILYIP 338 (338)
T ss_pred ccEEEEECC-CCCHHHHHHHHC-cCHHHHHHHhCCC--ccccCCCCEEEeC
Confidence 578899999 999999999999 9999999999994 6899999999998
No 482
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.89 E-value=0.0001 Score=72.32 Aligned_cols=115 Identities=20% Similarity=0.183 Sum_probs=77.7
Q ss_pred eEEEEEEECCCeeEEEEeccc----------------HHHHHHHHHhcCCC---CceeEeeEEEe-----cCceeEEEEe
Q 005923 380 GSVYRGSFKGDDAAVKVMKGD----------------VSSEINILKKINHS---NIIRLSGFCVH-----EGNTYLVYEF 435 (669)
Q Consensus 380 G~Vy~g~~~g~~vavK~~~~~----------------~~~E~~~l~~l~H~---niv~l~g~~~~-----~~~~~lV~e~ 435 (669)
..|.+=..+|....+|..+.+ ..+++..+.+++.. ....++.+... ....+|+|||
T Consensus 45 ~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EY 124 (229)
T PF06176_consen 45 NYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTSSYVLLMEY 124 (229)
T ss_pred cEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeeeccceeEEEEEEEE
Confidence 345566668888999987643 22344444444322 22232333322 2345789999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 436 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
++|..|.++.. ++. .++..+..++.-||+.| ++|+|..|.|+++++++ +++.||+..+.
T Consensus 125 IeG~~l~d~~~---------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-i~iID~~~k~~ 183 (229)
T PF06176_consen 125 IEGVELNDIED---------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-IRIIDTQGKRM 183 (229)
T ss_pred ecCeecccchh---------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-EEEEECccccc
Confidence 99988766542 222 25566778899999999 99999999999998554 99999988764
No 483
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.83 E-value=8.4e-05 Score=82.38 Aligned_cols=135 Identities=18% Similarity=0.266 Sum_probs=85.2
Q ss_pred hHHHHHhCCCCcccceeeEEEEEEE-CCCeeEEEEecc------------------------------------------
Q 005923 363 QDLKIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMKG------------------------------------------ 399 (669)
Q Consensus 363 ~~l~~~~g~f~~~~~~~G~Vy~g~~-~g~~vavK~~~~------------------------------------------ 399 (669)
++.-+|..+. |.||+|++ +|+.||||+.+.
T Consensus 165 ~~~piaaASl-------aQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ 237 (538)
T KOG1235|consen 165 DEEPIAAASL-------AQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQ 237 (538)
T ss_pred Ccchhhhcch-------hheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHh
Confidence 3445788888 99999999 578899999753
Q ss_pred --cHHHHHHHHHhc----CCCCc---eeEeeEEE-ecCceeEEEEecCCCCHHHH--HhcCCCCCCCCCCHHHHHHHHHH
Q 005923 400 --DVSSEINILKKI----NHSNI---IRLSGFCV-HEGNTYLVYEFADNGALSDW--LHSNRYQTSDNLTWKQRVQIAYD 467 (669)
Q Consensus 400 --~~~~E~~~l~~l----~H~ni---v~l~g~~~-~~~~~~lV~e~~~~gsL~~~--l~~~~~~~~~~l~~~~~~~i~~q 467 (669)
||..|++-..++ .|-+. |.+=.++. ......|+||||+|..+.|. +.+. .++...+..-+.+
T Consensus 238 ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~------gi~~~~i~~~l~~ 311 (538)
T KOG1235|consen 238 ELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR------GISPHDILNKLVE 311 (538)
T ss_pred hcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc------CCCHHHHHHHHHH
Confidence 233344333332 34441 11222222 23467999999999866554 3333 2554443333333
Q ss_pred HHHHHHHHHhCCCCCeEeeCCCCCCeeecC----CCcEEEcccCCccccCCC
Q 005923 468 VANALNYLHKYTNPPYVHKNLKTSNILLDT----NLRAKITNFGLARSAESD 515 (669)
Q Consensus 468 ia~~L~yLH~~~~~~ivHrDik~~NILl~~----~~~~kl~DfGla~~~~~~ 515 (669)
...-+-+ ..| ++|.|=.|.||++.. ++.+.+-|||+.......
T Consensus 312 ~~~~qIf--~~G---ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 312 AYLEQIF--KTG---FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred HHHHHHH--hcC---CccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 2222222 235 999999999999984 678999999999877543
No 484
>PRK11198 LysM domain/BON superfamily protein; Provisional
Probab=97.63 E-value=5.6e-05 Score=70.11 Aligned_cols=48 Identities=19% Similarity=0.349 Sum_probs=39.6
Q ss_pred eEEEEecCCcchhhhHhhhhcCchhHHHHHhcCC--CC-CCCCCCCceEEEe
Q 005923 128 TTYTIQNHVETYLSVANNTYQGLTTCQAMMSQNP--VD-SRNLTVGLDLFVP 176 (669)
Q Consensus 128 ~~y~V~~~gdT~~~IA~~~~~~lt~~~~l~~~N~--~~-~~~l~~G~~L~ip 176 (669)
..|+|+ +|||||+||.++|..-...+.|.++|+ +. +..|+|||+|.||
T Consensus 96 ~~y~Vk-~GDTL~~IA~~~~g~~~~~~~I~~~N~~~l~~~~~I~pGq~L~IP 146 (147)
T PRK11198 96 QFYTVK-SGDTLSAIAKKVYGNANKYNKIFEANKPMLKSPDKIYPGQVLRIP 146 (147)
T ss_pred eEEEEC-CCCCHHHHHHHHcCChhhHHHHHHhhhhcCCCcCCcCcCCEEecC
Confidence 579999 999999999555554456789999997 44 4589999999998
No 485
>PRK10593 hypothetical protein; Provisional
Probab=97.63 E-value=0.00047 Score=72.12 Aligned_cols=68 Identities=13% Similarity=0.153 Sum_probs=52.9
Q ss_pred HHhCCCCcccceeeEEEEEEECCCeeEEEEecc-----cHHHHHHHHHhcCC---CCceeEeeEEEec---CceeEEEEe
Q 005923 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG-----DVSSEINILKKINH---SNIIRLSGFCVHE---GNTYLVYEF 435 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~-----~~~~E~~~l~~l~H---~niv~l~g~~~~~---~~~~lV~e~ 435 (669)
++.|.. +.||+-...+..+.+|..+. .+..|.+.|+.+.- -.+.+++++|..+ +..+||||+
T Consensus 22 i~~G~~-------~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~ 94 (297)
T PRK10593 22 ISEQPY-------AALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER 94 (297)
T ss_pred cCCccc-------eeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence 677887 88999877666677787654 46789999999853 4688889888643 668999999
Q ss_pred cCCCCH
Q 005923 436 ADNGAL 441 (669)
Q Consensus 436 ~~~gsL 441 (669)
++++++
T Consensus 95 i~G~~~ 100 (297)
T PRK10593 95 LRGVSV 100 (297)
T ss_pred cCCEec
Confidence 998765
No 486
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.56 E-value=0.00069 Score=67.48 Aligned_cols=131 Identities=22% Similarity=0.293 Sum_probs=76.4
Q ss_pred eEEEEEEECCCeeEEEEecc-----cHHHHHHHHHhcCCC--CceeEeeEEEec---CceeEEEEecCCCCHHH------
Q 005923 380 GSVYRGSFKGDDAAVKVMKG-----DVSSEINILKKINHS--NIIRLSGFCVHE---GNTYLVYEFADNGALSD------ 443 (669)
Q Consensus 380 G~Vy~g~~~g~~vavK~~~~-----~~~~E~~~l~~l~H~--niv~l~g~~~~~---~~~~lV~e~~~~gsL~~------ 443 (669)
+.||+...++..+++|.... .+..|..+++.+... .+.++++++... ...+++|+++++..+.+
T Consensus 11 n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 90 (239)
T PF01636_consen 11 NRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDDELSPEQ 90 (239)
T ss_dssp SEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHHTSTHHH
T ss_pred eeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccccccccc
Confidence 78999999888999999854 366788998888533 356777655333 34689999999987777
Q ss_pred ----------HH---hcCCCCCCCCCCHHH---------HHHH------------HHHHHH-HHHHHHh----CCCCCeE
Q 005923 444 ----------WL---HSNRYQTSDNLTWKQ---------RVQI------------AYDVAN-ALNYLHK----YTNPPYV 484 (669)
Q Consensus 444 ----------~l---~~~~~~~~~~l~~~~---------~~~i------------~~qia~-~L~yLH~----~~~~~iv 484 (669)
.+ +... .....+.+.. .... ...+.. .++.+++ .....++
T Consensus 91 ~~~~~~~~~~~l~~lh~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (239)
T PF01636_consen 91 RPELLRQLGRALAQLHQVP-PPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALLPKPLPPVLI 169 (239)
T ss_dssp HHHHHHHHHHHHHHHHHSH-TTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred cccccccchhhhhhccccc-ccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhhccCCCcEEE
Confidence 11 1110 0111111111 0000 111222 3334432 1345599
Q ss_pred eeCCCCCCeeec-CCCcEEEcccCCccc
Q 005923 485 HKNLKTSNILLD-TNLRAKITNFGLARS 511 (669)
Q Consensus 485 HrDik~~NILl~-~~~~~kl~DfGla~~ 511 (669)
|+|+.+.|||++ +++.+-|.||+.+..
T Consensus 170 HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 170 HGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp -SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred EeccccccceeeeccceeEEEecccceE
Confidence 999999999999 667678999988753
No 487
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.54 E-value=0.0011 Score=65.84 Aligned_cols=121 Identities=25% Similarity=0.292 Sum_probs=84.2
Q ss_pred eEEEEEEE-CCCeeEEEEeccc-------------------------------HHHHHHHHHhcC--CCCceeEeeEEEe
Q 005923 380 GSVYRGSF-KGDDAAVKVMKGD-------------------------------VSSEINILKKIN--HSNIIRLSGFCVH 425 (669)
Q Consensus 380 G~Vy~g~~-~g~~vavK~~~~~-------------------------------~~~E~~~l~~l~--H~niv~l~g~~~~ 425 (669)
..||+|.- ++..+|||+.+.. ..+|..-|+++. +-.+.+-+++.
T Consensus 62 A~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~-- 139 (268)
T COG1718 62 ANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPEPIAFR-- 139 (268)
T ss_pred eEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCceeec--
Confidence 68999886 5889999998531 124677777763 34445555443
Q ss_pred cCceeEEEEecCCCCH-HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeeecCCCcEEE
Q 005923 426 EGNTYLVYEFADNGAL-SDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLKTSNILLDTNLRAKI 503 (669)
Q Consensus 426 ~~~~~lV~e~~~~gsL-~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~-~~~~~ivHrDik~~NILl~~~~~~kl 503 (669)
+..|||||+....+ .-.|+ .-.+.......+..++++.|.-|-. .+ +||+||..-|||+. ++.+.|
T Consensus 140 --~nVLvMEfIg~~g~pAP~Lk------Dv~~e~~e~~~~~~~~v~~~~~l~~~a~---LVHgDLSEyNiL~~-~~~p~i 207 (268)
T COG1718 140 --NNVLVMEFIGDDGLPAPRLK------DVPLELEEAEGLYEDVVEYMRRLYKEAG---LVHGDLSEYNILVH-DGEPYI 207 (268)
T ss_pred --CCeEEEEeccCCCCCCCCcc------cCCcCchhHHHHHHHHHHHHHHHHHhcC---cccccchhhheEEE-CCeEEE
Confidence 45799999965310 00111 1123333566777888888888876 66 99999999999999 889999
Q ss_pred cccCCccccCC
Q 005923 504 TNFGLARSAES 514 (669)
Q Consensus 504 ~DfGla~~~~~ 514 (669)
+|||-|.....
T Consensus 208 ID~~QaV~~~h 218 (268)
T COG1718 208 IDVSQAVTIDH 218 (268)
T ss_pred EECccccccCC
Confidence 99999876653
No 488
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.50 E-value=0.00093 Score=62.90 Aligned_cols=121 Identities=21% Similarity=0.329 Sum_probs=86.2
Q ss_pred HHHHhCCCCcccceeeEEEEEEECCCeeEEEEeccc-----HHHHHHHHHhcCCCCcee-EeeEEEecCceeEEEEecCC
Q 005923 365 LKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGD-----VSSEINILKKINHSNIIR-LSGFCVHEGNTYLVYEFADN 438 (669)
Q Consensus 365 l~~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~~-----~~~E~~~l~~l~H~niv~-l~g~~~~~~~~~lV~e~~~~ 438 (669)
..++.|.+ |.||.|.+.|..+|+|+-+.| +..|+++|..++-.++.. ++.|- ..++.|||+.|
T Consensus 28 ~~L~KG~~-------s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G 96 (201)
T COG2112 28 KELAKGTT-------SVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDG 96 (201)
T ss_pred hhhhcccc-------cEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcC
Confidence 35899999 999999999999999998654 788999999998766644 44443 33455999998
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCC--CCeeecCCCcEEEcccCCcccc
Q 005923 439 GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT--SNILLDTNLRAKITNFGLARSA 512 (669)
Q Consensus 439 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~--~NILl~~~~~~kl~DfGla~~~ 512 (669)
-.|.++-.. .+-+++ ..+++.---|...+ |-|+.|.- .||++.++ .+.|+||.-|..-
T Consensus 97 ~~L~~~~~~--------~~rk~l----~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~-~~~iIDFd~At~k 156 (201)
T COG2112 97 RPLGKLEIG--------GDRKHL----LRVLEKAYKLDRLG---IEHGELSRPWKNVLVNDR-DVYIIDFDSATFK 156 (201)
T ss_pred cchhhhhhc--------ccHHHH----HHHHHHHHHHHHhc---cchhhhcCCceeEEecCC-cEEEEEccchhhc
Confidence 888877642 122333 33444433355556 88888764 46666544 9999999998743
No 489
>PLN02876 acyl-CoA dehydrogenase
Probab=97.49 E-value=0.0006 Score=81.45 Aligned_cols=140 Identities=15% Similarity=0.319 Sum_probs=83.9
Q ss_pred HHhCCCCcccceeeEEEEEEECC----CeeEEEEec--------ccHHHHHHHHHhcC-CCCc--eeEeeEEEec---Cc
Q 005923 367 IATGSFSEENRIQGSVYRGSFKG----DDAAVKVMK--------GDVSSEINILKKIN-HSNI--IRLSGFCVHE---GN 428 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g----~~vavK~~~--------~~~~~E~~~l~~l~-H~ni--v~l~g~~~~~---~~ 428 (669)
++.|.+ +.+|+-...+ ..+++|+.. .++.+|.++|+.+. |.++ .+++++|.+. +.
T Consensus 46 l~gG~s-------n~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~ 118 (822)
T PLN02876 46 FGHGQS-------NPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGT 118 (822)
T ss_pred eCCCCc-------CceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCC
Confidence 455655 6677766643 356666642 24779999999995 6654 8888888654 46
Q ss_pred eeEEEEecCCCCHHH--------------------H---HhcCCCC------CCCCCCH--HHHHHHH------------
Q 005923 429 TYLVYEFADNGALSD--------------------W---LHSNRYQ------TSDNLTW--KQRVQIA------------ 465 (669)
Q Consensus 429 ~~lV~e~~~~gsL~~--------------------~---l~~~~~~------~~~~l~~--~~~~~i~------------ 465 (669)
.|+||||+++..+.+ . ||.-... ...+..+ .++.++.
T Consensus 119 ~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~ 198 (822)
T PLN02876 119 AFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKP 198 (822)
T ss_pred ceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCC
Confidence 789999999754321 1 2221000 0011111 1221111
Q ss_pred ---HHHHHHHHHHHhCC--------CCCeEeeCCCCCCeeecC-CCc-EEEcccCCccccC
Q 005923 466 ---YDVANALNYLHKYT--------NPPYVHKNLKTSNILLDT-NLR-AKITNFGLARSAE 513 (669)
Q Consensus 466 ---~qia~~L~yLH~~~--------~~~ivHrDik~~NILl~~-~~~-~kl~DfGla~~~~ 513 (669)
-.+...+++|..+- .+.+||+|+++.|||++. +.+ .-|.||.++....
T Consensus 199 ~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd 259 (822)
T PLN02876 199 PRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN 259 (822)
T ss_pred CCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence 12334466775432 134999999999999985 334 5789999887543
No 490
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.36 E-value=0.00067 Score=79.75 Aligned_cols=197 Identities=17% Similarity=0.200 Sum_probs=139.0
Q ss_pred HHHHHHHHHhcCCCCceeEeeEEEecCce----eEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 005923 401 VSSEINILKKINHSNIIRLSGFCVHEGNT----YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476 (669)
Q Consensus 401 ~~~E~~~l~~l~H~niv~l~g~~~~~~~~----~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH 476 (669)
...|+..+.++.|+|++.+++|-.++... .+..|++..-++...+..- ..++....+.+..++..||.|+|
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v-----~~i~~~~~r~~~~~~~~GL~~~h 303 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV-----GSIPLETLRILHQKLLEGLAYLH 303 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc-----cccCHHHHHHHHHHHhhhHHHHH
Confidence 34578888899999999999997765432 3456777777777777543 56888899999999999999999
Q ss_pred hCCCCCeEeeCCCCC---CeeecCCCcEEEc--ccCCccccCCCccccCCcccceeeecccccccccccccccCCCCch-
Q 005923 477 KYTNPPYVHKNLKTS---NILLDTNLRAKIT--NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPK- 550 (669)
Q Consensus 477 ~~~~~~ivHrDik~~---NILl~~~~~~kl~--DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~~- 550 (669)
+.. ..|.-+..+ +.-.+..+...++ ||+.++........ ....-+..|.++|......+..+
T Consensus 304 ~~~---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~---------~~~~~~~~~~~~e~~~~~~~~~~r 371 (1351)
T KOG1035|consen 304 SLS---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS---------FSDLLAEIRNADEDLKENTAKKSR 371 (1351)
T ss_pred Hhc---cceeEEecccccccccCccceeecchhhhcccccCCCcccc---------hhhcCccccccccccccccchhhh
Confidence 986 667666665 5555666777777 99988876544321 11233456788888876665544
Q ss_pred -hhHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHhhhhHHhhhhcccCCccCCCCcHHHHHHHHHHHHHhcccC
Q 005923 551 -LDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHD 629 (669)
Q Consensus 551 -sDV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~d 629 (669)
.|+|.+|..+.-+..|........ ....+++ ......+.+...+|+..+
T Consensus 372 ~~dL~~lgll~~~~~~~~~i~~~~~----------------------~~~~~l~--------~~~~~~~~d~~~~~~~~~ 421 (1351)
T KOG1035|consen 372 LTDLWCLGLLLLQLSQGEDISEKSA----------------------VPVSLLD--------VLSTSELLDALPKCLDED 421 (1351)
T ss_pred hhHHHHHHHHHhhhhhcCccccccc----------------------chhhhhc--------cccchhhhhhhhhhcchh
Confidence 799999999999988765432110 0001111 011114678889999999
Q ss_pred CCCCCCHHHHHHHHH
Q 005923 630 LNARPSISEVFVTLS 644 (669)
Q Consensus 630 P~~RPt~~evl~~L~ 644 (669)
+.+|++..+++...-
T Consensus 422 ~~~Rl~~~~ll~~~f 436 (1351)
T KOG1035|consen 422 SEERLSALELLTHPF 436 (1351)
T ss_pred hhhccchhhhhhchh
Confidence 999999999998753
No 491
>smart00257 LysM Lysin motif.
Probab=97.35 E-value=0.0003 Score=49.53 Aligned_cols=43 Identities=14% Similarity=0.128 Sum_probs=37.7
Q ss_pred eecCCCCCCHHHHHHhhCCCChHHHhhhcCCCCCCCCCCCCCcEEE
Q 005923 64 FRSNPSYNTPVTIDYLFKTSHPNLIASINSITNVTATLPTDTPVLI 109 (669)
Q Consensus 64 y~~~~~g~tl~~Ia~~~~~~~~~~i~~~N~~~~~~~~l~~gq~l~I 109 (669)
|++++ |||+++||..|+ ++..+|.++|+.. ....+.+|+.|.|
T Consensus 2 ~~v~~-gdt~~~ia~~~~-~~~~~~~~~N~~~-~~~~~~~g~~l~i 44 (44)
T smart00257 2 YTVKK-GDTLSSIARRYG-ISVSDLLELNNIL-DPDNLQVGQKLKI 44 (44)
T ss_pred eEeCC-CCCHHHHHHHhC-CCHHHHHHHcCCC-CccccCCCCEEeC
Confidence 78888 999999999999 9999999999854 5678889988764
No 492
>COG1388 LytE FOG: LysM repeat [Cell envelope biogenesis, outer membrane]
Probab=97.32 E-value=0.00025 Score=63.89 Aligned_cols=46 Identities=28% Similarity=0.468 Sum_probs=42.7
Q ss_pred eEEEEecCCcchhhhHhhhhcCchhHHHHHhcCCCCCCCCCCCceEEEee
Q 005923 128 TTYTIQNHVETYLSVANNTYQGLTTCQAMMSQNPVDSRNLTVGLDLFVPL 177 (669)
Q Consensus 128 ~~y~V~~~gdT~~~IA~~~~~~lt~~~~l~~~N~~~~~~l~~G~~L~ip~ 177 (669)
..|+|+ .||||+.|| +.|+ .+...|+++|.+..+.+++||.|.+|.
T Consensus 67 ~~~~V~-~gdtL~~Ia-~~~~--~tv~~l~~~n~l~~~~i~~gq~l~~~~ 112 (124)
T COG1388 67 VTYTVK-KGDTLSKIA-RKYG--VTVAELKQLNNLSSDKIKVGQKLKLPV 112 (124)
T ss_pred ceEEEe-cCCCHHHHH-HHhC--CCHHHHHHHhccCCCceecCcEEEEec
Confidence 579999 999999999 7787 888999999999988999999999987
No 493
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.32 E-value=4.7e-05 Score=83.78 Aligned_cols=176 Identities=18% Similarity=0.183 Sum_probs=125.1
Q ss_pred HHhCCCCcccceeeEEEEEEECCC-eeEEEEecc--cHHHHHHHHHhcCCCC-ceeEeeEEEecCceeEEEEecCCC-CH
Q 005923 367 IATGSFSEENRIQGSVYRGSFKGD-DAAVKVMKG--DVSSEINILKKINHSN-IIRLSGFCVHEGNTYLVYEFADNG-AL 441 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g~-~vavK~~~~--~~~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~lV~e~~~~g-sL 441 (669)
.+.+.+ ++++|.+-..+ ...++.+.. ...-++++|.+++||| .+..++-+..+...++++++...| +-
T Consensus 250 fvK~al-------tknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~ 322 (829)
T KOG0576|consen 250 FVKGAL-------TKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSS 322 (829)
T ss_pred HHHHHh-------cCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccc
Confidence 566777 78888876432 233555543 3456899999999999 777777777777889999999887 21
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeeecCCCcEEEcccCCccccCCCccccCC
Q 005923 442 SDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521 (669)
Q Consensus 442 ~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 521 (669)
..-.. ...-.+..-+...+.+.-.+++++||+.- =+|+| ||+..+ ...|..||+....+....
T Consensus 323 ~~~~~----~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~----- 385 (829)
T KOG0576|consen 323 ALEMT----VSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM----- 385 (829)
T ss_pred cccCC----hhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc-----
Confidence 11110 01112334455566777888999999864 48998 777654 678999999887765432
Q ss_pred cccceeeecccccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCC
Q 005923 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAV 570 (669)
Q Consensus 522 ~~~~~~~~~~gt~~y~aPE~l~~~~~s~~sDV~S~Gvvl~elltg~~p~ 570 (669)
..+...+|+.|+|||+.....+..+.|+|+.|+--.++--|-.|-
T Consensus 386 ----~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 386 ----KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred ----ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 245578999999999999999999999999998666666555543
No 494
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.11 E-value=0.0024 Score=64.32 Aligned_cols=32 Identities=22% Similarity=0.458 Sum_probs=26.6
Q ss_pred CCCeEeeCCCCCCeeecCCCcEEEcccCCccc
Q 005923 480 NPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511 (669)
Q Consensus 480 ~~~ivHrDik~~NILl~~~~~~kl~DfGla~~ 511 (669)
.+.++|+|+.+.|||++++...-|.||+.+..
T Consensus 163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred CceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 34499999999999998766567999998764
No 495
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.09 E-value=0.006 Score=61.28 Aligned_cols=128 Identities=20% Similarity=0.299 Sum_probs=73.6
Q ss_pred eEEEEEEEC---CCeeEEEEecc------cHHHHHHHHHhcCCCCc-eeEeeEEEecCceeEEEEecCCCCHHHH-----
Q 005923 380 GSVYRGSFK---GDDAAVKVMKG------DVSSEINILKKINHSNI-IRLSGFCVHEGNTYLVYEFADNGALSDW----- 444 (669)
Q Consensus 380 G~Vy~g~~~---g~~vavK~~~~------~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~e~~~~gsL~~~----- 444 (669)
..+|+.... +..+.+|.... +..+|+.+++.+...++ .++++.+. ..+||||+++.++...
T Consensus 12 N~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~l~~~~~~~~ 87 (235)
T cd05157 12 NKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRTLEPEDLRNP 87 (235)
T ss_pred ceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCcCCHHHccCh
Confidence 578887765 46788887643 34579999999854433 44444332 2489999998665321
Q ss_pred ------------HhcCCCCCC------CCC-CHHHHHHHHH----------------------HHHHHHHHH----HhC-
Q 005923 445 ------------LHSNRYQTS------DNL-TWKQRVQIAY----------------------DVANALNYL----HKY- 478 (669)
Q Consensus 445 ------------l~~~~~~~~------~~l-~~~~~~~i~~----------------------qia~~L~yL----H~~- 478 (669)
+|....... ... -|..+..+.. .+...+..| ...
T Consensus 88 ~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 167 (235)
T cd05157 88 KIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISWLKELLSALN 167 (235)
T ss_pred HHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHHHHHHhcccC
Confidence 111110100 111 1222222211 111111222 111
Q ss_pred CCCCeEeeCCCCCCeeecC-CCcEEEcccCCccc
Q 005923 479 TNPPYVHKNLKTSNILLDT-NLRAKITNFGLARS 511 (669)
Q Consensus 479 ~~~~ivHrDik~~NILl~~-~~~~kl~DfGla~~ 511 (669)
....++|+|+.+.|||+++ +..+.++||..|..
T Consensus 168 ~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 168 SPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred CCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 2235999999999999998 57899999988764
No 496
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.01 E-value=0.0036 Score=63.91 Aligned_cols=127 Identities=14% Similarity=0.151 Sum_probs=75.4
Q ss_pred eEEEEEEECCCeeEEEEecc-------cHHHHHHHHHhcCCCCc-eeEeeEEEecCceeEEEEecCCCCHHHH-------
Q 005923 380 GSVYRGSFKGDDAAVKVMKG-------DVSSEINILKKINHSNI-IRLSGFCVHEGNTYLVYEFADNGALSDW------- 444 (669)
Q Consensus 380 G~Vy~g~~~g~~vavK~~~~-------~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~e~~~~gsL~~~------- 444 (669)
+.+|+...++..+++|.... +..+|.++++.+....+ .++++.+ ..++||||++|..+...
T Consensus 10 n~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~----~~~~v~e~i~G~~~~~~~~~~~~~ 85 (256)
T TIGR02721 10 NRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN----EHWLLVEWLEGEVITLDQFVALDL 85 (256)
T ss_pred CCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe----CCEEEEEeccCcccccccccCchh
Confidence 67888877787888887532 46789999999965433 3445443 23799999998655321
Q ss_pred ----------HhcCCCCCCCCCCHHHH-HHHHHH---------HHHHHHHHHhC-----CCCCeEeeCCCCCCeeecCCC
Q 005923 445 ----------LHSNRYQTSDNLTWKQR-VQIAYD---------VANALNYLHKY-----TNPPYVHKNLKTSNILLDTNL 499 (669)
Q Consensus 445 ----------l~~~~~~~~~~l~~~~~-~~i~~q---------ia~~L~yLH~~-----~~~~ivHrDik~~NILl~~~~ 499 (669)
||... .....++.... .++..+ +...+..+... ..+.++|+|+.+.||++++++
T Consensus 86 ~~~la~~l~~lH~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~~ 164 (256)
T TIGR02721 86 LLELAALLHQLHSQP-RFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQG 164 (256)
T ss_pred HHHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCCC
Confidence 22211 11122222211 111111 11122222221 123599999999999999877
Q ss_pred cEEEcccCCcccc
Q 005923 500 RAKITNFGLARSA 512 (669)
Q Consensus 500 ~~kl~DfGla~~~ 512 (669)
+.|+||..+...
T Consensus 165 -~~lIDwE~a~~g 176 (256)
T TIGR02721 165 -LKLIDWEYASDG 176 (256)
T ss_pred -CEEEeccccCcC
Confidence 789999988653
No 497
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=96.83 E-value=0.016 Score=56.54 Aligned_cols=92 Identities=24% Similarity=0.313 Sum_probs=66.9
Q ss_pred HHHHHHHHHhcC------CCCceeEeeEEEecCceeEEEEecCCC------CHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 005923 401 VSSEINILKKIN------HSNIIRLSGFCVHEGNTYLVYEFADNG------ALSDWLHSNRYQTSDNLTWKQRVQIAYDV 468 (669)
Q Consensus 401 ~~~E~~~l~~l~------H~niv~l~g~~~~~~~~~lV~e~~~~g------sL~~~l~~~~~~~~~~l~~~~~~~i~~qi 468 (669)
..+|+.-..++. +.+|.+++|+...+....+|+|.+.+. +|.+++... .++. ... ..+
T Consensus 58 ~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~------~~~~-~~~---~~L 127 (199)
T PF10707_consen 58 NRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG------GLTE-ELR---QAL 127 (199)
T ss_pred HHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC------CccH-HHH---HHH
Confidence 345776666655 789999999999888889999997653 788888653 2554 333 334
Q ss_pred HHHHHHHHhCCCCCeEeeCCCCCCeeecCC---C-cEEEcc
Q 005923 469 ANALNYLHKYTNPPYVHKNLKTSNILLDTN---L-RAKITN 505 (669)
Q Consensus 469 a~~L~yLH~~~~~~ivHrDik~~NILl~~~---~-~~kl~D 505 (669)
-+-.+||-+.+ |+.+|++|.||++..+ . .+.|+|
T Consensus 128 ~~f~~~l~~~~---Iv~~dl~~~NIv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 128 DEFKRYLLDHH---IVIRDLNPHNIVVQRRDSGEFRLVLID 165 (199)
T ss_pred HHHHHHHHHcC---CeecCCCcccEEEEecCCCceEEEEEe
Confidence 44456777777 9999999999999543 2 566776
No 498
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.54 E-value=0.016 Score=60.04 Aligned_cols=134 Identities=20% Similarity=0.316 Sum_probs=70.1
Q ss_pred HHhCCCCcccceeeEEEEEEECCCeeEEEEecc----cHHHHHHHHHhcC---CCCceeEeeEEEecCceeEEEEecCCC
Q 005923 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG----DVSSEINILKKIN---HSNIIRLSGFCVHEGNTYLVYEFADNG 439 (669)
Q Consensus 367 ~~~g~f~~~~~~~G~Vy~g~~~g~~vavK~~~~----~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~e~~~~g 439 (669)
++.|.. ..+|+-..+++.+.||.-.. .|..|.+-|+.|. --.+.+.+++...++..+||+||++.+
T Consensus 25 v~GG~i-------~~a~~~~~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 25 VSGGDI-------NEAYRLDTDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp E--SSS-------SEEEEEETTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred cCCCCh-------hheEEEECCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 556666 67888887888999998753 3788999999883 446788999888777889999999876
Q ss_pred --C------HHH---HHhc-CCCC----------------CCCCCCHH-----HHHHHHHHHHH-----------HHHH-
Q 005923 440 --A------LSD---WLHS-NRYQ----------------TSDNLTWK-----QRVQIAYDVAN-----------ALNY- 474 (669)
Q Consensus 440 --s------L~~---~l~~-~~~~----------------~~~~l~~~-----~~~~i~~qia~-----------~L~y- 474 (669)
+ |.. .||. .... +...=+|. +|+....+.+. .++-
T Consensus 98 ~~~~~~~~~lg~~LA~LH~~~~~~~FGf~~~~~~G~~~q~N~w~~~W~~Ff~~~RL~~~l~~~~~~~~~~~~~~~l~~~~ 177 (288)
T PF03881_consen 98 SPSPPDWEELGRQLAALHQWSPAGKFGFPVDTYIGSLPQPNTWTDSWEEFFAEQRLRPQLELAREKGGLDAELERLVERL 177 (288)
T ss_dssp ---CCHHHHHHHHHHHHHH-T--SSBB-SS-EEETTEEE----BS-HHHHHHHHCCHHHHHHHHHCTSS-CHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHhhhcCCCCcCCCcCCcccCcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHH
Confidence 1 111 2333 1100 00012332 12221111111 1111
Q ss_pred ---HHhC-CCCCeEeeCCCCCCeeecCCCcEEEcccC
Q 005923 475 ---LHKY-TNPPYVHKNLKTSNILLDTNLRAKITNFG 507 (669)
Q Consensus 475 ---LH~~-~~~~ivHrDik~~NILl~~~~~~kl~DfG 507 (669)
|+.. -.|.++|+||.+.|++.+.++.+.|.|=.
T Consensus 178 ~~~l~~~~~~PsLlHGDLW~GN~~~~~~g~p~l~DPa 214 (288)
T PF03881_consen 178 PSLLPGREPKPSLLHGDLWSGNVGFDADGEPVLFDPA 214 (288)
T ss_dssp HHCCTTS----EEE-SS-SGGGEEEETTE-EEE-S--
T ss_pred HHHhcCCCCCceeeEcCccccceeecCCCCceeeccc
Confidence 2211 25789999999999999999889998843
No 499
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.54 E-value=0.02 Score=62.09 Aligned_cols=65 Identities=20% Similarity=0.157 Sum_probs=47.4
Q ss_pred HHHhCCCCcccceeeEEEEEEECCC--eeEEEEec--------------ccHHHHHHHHHhcC---CCCceeEeeEEEec
Q 005923 366 KIATGSFSEENRIQGSVYRGSFKGD--DAAVKVMK--------------GDVSSEINILKKIN---HSNIIRLSGFCVHE 426 (669)
Q Consensus 366 ~~~~g~f~~~~~~~G~Vy~g~~~g~--~vavK~~~--------------~~~~~E~~~l~~l~---H~niv~l~g~~~~~ 426 (669)
+++.|++ ..||+....+. .+.||.-. .....|.+.|..+. -.++.+++.+ +.
T Consensus 33 elggGn~-------N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~ 103 (401)
T PRK09550 33 EIGDGNL-------NLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DE 103 (401)
T ss_pred EcCCCce-------EEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CC
Confidence 3788888 89999998643 79999732 12456888888763 2467778877 45
Q ss_pred CceeEEEEecCCC
Q 005923 427 GNTYLVYEFADNG 439 (669)
Q Consensus 427 ~~~~lV~e~~~~g 439 (669)
+..++||||+++.
T Consensus 104 ~~~~lVME~L~~~ 116 (401)
T PRK09550 104 ELAVTVMEDLSDH 116 (401)
T ss_pred CCCEEEEecCCCc
Confidence 6689999999864
No 500
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=96.24 E-value=0.056 Score=52.63 Aligned_cols=104 Identities=18% Similarity=0.323 Sum_probs=74.9
Q ss_pred eEEEEEEECCCeeEEEEecc----------------------------cHHHHHHHHHhc---CCCCc--eeEeeEEEec
Q 005923 380 GSVYRGSFKGDDAAVKVMKG----------------------------DVSSEINILKKI---NHSNI--IRLSGFCVHE 426 (669)
Q Consensus 380 G~Vy~g~~~g~~vavK~~~~----------------------------~~~~E~~~l~~l---~H~ni--v~l~g~~~~~ 426 (669)
|.||+.+.+|..+|+|.++. .|..|.+...+| .+.++ |+.+||..-.
T Consensus 52 ~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~ 131 (207)
T PF13095_consen 52 GYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGREGLWAVKCHGYLLLT 131 (207)
T ss_pred eEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccccCceEEEeeEEEEEc
Confidence 78999999999999999421 144577776666 45566 9999997422
Q ss_pred C------------------ceeEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCC
Q 005923 427 G------------------NTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNL 488 (669)
Q Consensus 427 ~------------------~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qia~~L~yLH~~~~~~ivHrDi 488 (669)
. .+.+|.||++... .++-. -+.+|.+-|..+|..+ |+-+|+
T Consensus 132 ~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~--------------~~~~~----~~~~~~~dl~~~~k~g---I~~~Dv 190 (207)
T PF13095_consen 132 EDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP--------------PLQIR----DIPQMLRDLKILHKLG---IVPRDV 190 (207)
T ss_pred hHHHHHHhhcccccCCCCccEEEEEeecCCcc--------------ccchh----HHHHHHHHHHHHHHCC---eeeccC
Confidence 0 2357888776532 13333 3456667788899999 999999
Q ss_pred CCCCeeecCCCcEEEcccCCc
Q 005923 489 KTSNILLDTNLRAKITNFGLA 509 (669)
Q Consensus 489 k~~NILl~~~~~~kl~DfGla 509 (669)
++.|.. .-||+|||.+
T Consensus 191 ~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 191 KPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred cccccc-----CCEEEecccC
Confidence 999986 4689999864
Done!