Your job contains 1 sequence.
>005927
MDHSNSGKEALEGIGNDGELKVGTEVKSDAEAYNLCNNYAFRKGFSLRKGHVRRDASGNI
RQRDFVCSKEGFPVDEDLCAVKRCNRLETRTGCKVLMRFTVSNGVWVISHINFEHNHELA
KPEERQFLRSCRKIFEASGGVDVGRRRTKPLSYLGNDFGGDRNVQFAKKDMGNYLPREMG
NMMEPGDVQGLLNYFRRKKCEDPSFFYAVQVNQLNQATNFFWRDGRSKLDYDCFGDVVSF
DATFRLNKYNLICAPFVGVNHHWKNMLFGCAFLLDESTHSYVWLFESFLESMGNTQPKTI
FTNENEAMSKAIETVFMKTRHRLSTGHIVKDARRNLANQFANLEFMKYLNKCFYECHDET
EFQVSWDDMINKFSLGDHLWLKKLYSLRDKWCLVFNSDTFSANIDSVQRSDSIDTVFHQV
STKRMDVISFVQHFEEKTKEMHLDELEDDHFCKHVVPRLQVWNGILNHAVYVYTSKIFNF
FEMELLGCMGVRMKEVCKDGEVCIYEAIEEGQQKVCKINYNLSTQDISCSCKLFERMGIL
CRHALKAFDFNNLTQIPVQYILKRWTKEAKKGIVVRVSNERHGLSSNTVKSVQSLRLSEL
MHMGSNVYSIASLSDSGTKIVKEKLAEAMELLEKDEEIVNRLAHAKKVDSSPSLNAISDI
WTMASLSQV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005927
(669 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121060 - symbol:FRS5 "FAR1-related sequence 5... 883 2.0e-88 1
TAIR|locus:2082420 - symbol:FRS7 "FAR1-related sequence 7... 599 2.0e-73 2
TAIR|locus:2129665 - symbol:FAR1 "FAR-RED IMPAIRED RESPON... 730 3.2e-72 1
TAIR|locus:2144930 - symbol:FRS12 "FAR1-related sequence ... 575 7.6e-72 2
TAIR|locus:2090394 - symbol:FHY3 "far-red elongated hypoc... 629 6.0e-68 2
TAIR|locus:2014639 - symbol:FRS4 "FAR1-related sequence 4... 688 9.2e-68 1
TAIR|locus:2059304 - symbol:FRS3 "FAR1-related sequence 3... 677 1.3e-66 1
TAIR|locus:2035144 - symbol:FRS6 "FAR1-related sequence 6... 625 4.3e-61 1
TAIR|locus:2062606 - symbol:FRS2 "FAR1-related sequence 2... 521 3.3e-57 2
TAIR|locus:2121003 - symbol:FRS9 "FAR1-related sequence 9... 574 1.1e-55 1
TAIR|locus:2016259 - symbol:FRS8 "FAR1-related sequence 8... 558 5.5e-54 1
TAIR|locus:2182778 - symbol:FRS10 "FAR1-related sequence ... 403 3.6e-46 2
TAIR|locus:2012828 - symbol:FRS11 "FAR1-related sequence ... 466 9.3e-43 1
TAIR|locus:2097543 - symbol:AT3G59470 species:3702 "Arabi... 156 1.1e-08 1
TAIR|locus:2079651 - symbol:AT3G07500 "AT3G07500" species... 141 2.9e-07 1
TAIR|locus:2041041 - symbol:AT2G43280 species:3702 "Arabi... 121 6.7e-05 1
TAIR|locus:2135738 - symbol:AT4G12850 "AT4G12850" species... 110 0.00081 1
>TAIR|locus:2121060 [details] [associations]
symbol:FRS5 "FAR1-related sequence 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL035538
EMBL:AL161593 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000241939
EMBL:AY136457 IPI:IPI00529649 PIR:T05645 RefSeq:NP_195531.1
UniGene:At.31195 UniGene:At.48951 PRIDE:Q9SZL8
EnsemblPlants:AT4G38180.1 GeneID:829974 KEGG:ath:AT4G38180
TAIR:At4g38180 eggNOG:NOG236180 InParanoid:Q9SZL8 OMA:RNNRQKS
PhylomeDB:Q9SZL8 ProtClustDB:CLSN2685396 Genevestigator:Q9SZL8
Uniprot:Q9SZL8
Length = 788
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 216/624 (34%), Positives = 334/624 (53%)
Query: 5 NSGKEALEGIGNDGELKVGTEVKSDAEAYNLCNNYAFRKGFSLRKGHVRRDA-SGNIRQR 63
N +EA + + D E G E +S+ A N+YA R GFS R RR G I QR
Sbjct: 60 NQEEEACDLL--DLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQR 117
Query: 64 DFVCSKEGFP-VDEDLCA---VKRCNRLETRTGCKVLMRFTVSN-GVWVISHINFEHNHE 118
FVC+KEGF ++E +KR R TR GCK + + + G W++S +HNHE
Sbjct: 118 QFVCAKEGFRNMNEKRTKDREIKR-PRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHE 176
Query: 119 LAKPEERQFLRSCRKIF-EASGGVDV----GRRRTKPLSYLGNDFGGDRNVQFAKKDMGN 173
L P++ LRS R+I A +D G + +S L ++GG V F + D N
Sbjct: 177 LVPPDQVHCLRSHRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRN 236
Query: 174 YLPREMGNMMEPGDVQGLLNYFRRKKCEDPSFFYAVQVNQLNQATNFFWRDGRSKLDYDC 233
Y+ +E G++Q LL+Y R+ ++P+FFY+VQ ++ N FW D ++ +D+
Sbjct: 237 YMRNNRQKSIE-GEIQLLLDYLRQMNADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTH 295
Query: 234 FGDVVSFDATFRLNKYNLICAPFVGVNHHWKNMLFGCAFLLDESTHSYVWLFESFLESMG 293
FGD V+FD T+R N+Y L APF GVNHH + +LFGCAF+++E+ S+VWLF ++L +M
Sbjct: 296 FGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPILFGCAFIINETEASFVWLFNTWLAAMS 355
Query: 294 NTQPKTIFTNENEAMSKAIETVFMKTRHRLSTGHIVKDARRNLANQFA-NLEFMKYLNKC 352
P +I T+ + + AI VF RHR HI+K + L++ F + F +KC
Sbjct: 356 AHPPVSITTDHDAVIRAAIMHVFPGARHRFCKWHILKKCQEKLSHVFLKHPSFESDFHKC 415
Query: 353 FYECHDETEFQVSWDDMINKFSLGDHLWLKKLYSLRDKWCLVFNSDTFSANIDSVQRSDS 412
+F+ W +++K+ L DH WL+ +YS R +W V+ DTF A++ RSDS
Sbjct: 416 VNLTESVEDFERCWFSLLDKYELRDHEWLQAIYSDRRQWVPVYLRDTFFADMSLTHRSDS 475
Query: 413 IDTVFHQVSTKRMDVISFVQHFEEKTKEMHLD-ELEDDHFCKHVVPRLQVWNGILNHAVY 471
I++ F ++ F + +E K E L+ E++ D+ + P L+ + + A
Sbjct: 476 INSYFDGYINASTNLSQFFKLYE-KALESRLEKEVKADYDTMNSPPVLKTPSPMEKQASE 534
Query: 472 VYTSKIFNFFEMELLGCMGVRMKEVCKDGEVCIYEAIEEGQ-QKVCKINYNLSTQDISCS 530
+YT K+F F+ EL+G + + DG++ Y+ + G+ K + +N+ +CS
Sbjct: 535 LYTRKLFMRFQEELVGTLTFMASKADDDGDLVTYQVAKYGEAHKAHFVKFNVLEMRANCS 594
Query: 531 CKLFERMGILCRHALKAFDFNNLTQIPVQYILKRWTKEAKKGIVVRVSNERHGLSSNTVK 590
C++FE GI+CRH L F NL +P YILKRWT+ AK ++ N H + N ++
Sbjct: 595 CQMFEFSGIICRHILAVFRVTNLLTLPPYYILKRWTRNAKSSVIFDDYN-LHAYA-NYLE 652
Query: 591 SVQSLRLSELMHMGSNVYSIASLS 614
S ++R + L H SN A S
Sbjct: 653 S-HTVRYNTLRHKASNFVQEAGKS 675
>TAIR|locus:2082420 [details] [associations]
symbol:FRS7 "FAR1-related sequence 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC018907
InterPro:IPR018289 Pfam:PF10551 eggNOG:NOG292373
HOGENOM:HOG000112649 ProtClustDB:CLSN2686747 EMBL:AF360270
EMBL:AY150446 IPI:IPI00534625 RefSeq:NP_566278.1 UniGene:At.19021
UniGene:At.74222 PRIDE:Q9M8J3 EnsemblPlants:AT3G06250.1
GeneID:819799 KEGG:ath:AT3G06250 TAIR:At3g06250 InParanoid:Q9M8J3
OMA:RCGNEIE PhylomeDB:Q9M8J3 Genevestigator:Q9M8J3 Uniprot:Q9M8J3
Length = 764
Score = 599 (215.9 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 132/444 (29%), Positives = 228/444 (51%)
Query: 159 GGDRNVQFAK-KDMGNYLPREMGNMMEPGDVQGLLNYFRRKKCEDPSFFYAVQVNQLNQA 217
GG +V + D+ N++ N + LL+YF+ K+ ED FFYA++++
Sbjct: 296 GGLDSVDLIELNDLSNHISSTRENTIGKEWYPVLLDYFQSKQAEDMGFFYAIELDSNGSC 355
Query: 218 TNFFWRDGRSKLDYDCFGDVVSFDATFRLNKYNLICAPFVGVNHHWKNMLFGCAFLLDES 277
+ FW D RS+ FGD V FD ++R Y++ A F+G NHH + +L G A + DES
Sbjct: 356 MSIFWADSRSRFACSQFGDAVVFDTSYRKGDYSVPFATFIGFNHHRQPVLLGGALVADES 415
Query: 278 THSYVWLFESFLESMGNTQPKTIFTNENEAMSKAIETVFMKTRHRLSTGHIVKDARRNLA 337
++ WLF+++L +M +P+++ +++ + +A+ VF T HR S I R NL
Sbjct: 416 KEAFSWLFQTWLRAMSGRRPRSMVADQDLPIQQAVAQVFPGTHHRFSAWQIRSKERENLR 475
Query: 338 NQFANLEFMKYLNKCFYECHDETEFQVSWDDMINKFSLGDHLWLKKLYSLRDKWCLVFNS 397
+ F N EF KC Y+ EF W ++NK+ L D++WL+++Y R+KW +
Sbjct: 476 S-FPN-EFKYEYEKCLYQSQTTVEFDTMWSSLVNKYGLRDNMWLREIYEKREKWVPAYLR 533
Query: 398 DTFSANIDSVQRSDSIDTVFHQVSTKRMDVI-SFVQHFEEKTKEMHLDELEDDHFCKHVV 456
+F I D F+ S + + F+ +E+ ++ +E ++D ++
Sbjct: 534 ASFFGGI----HVDGTFDPFYGTSLNSLTSLREFISRYEQGLEQRREEERKEDFNSYNLQ 589
Query: 457 PRLQVWNGILNHAVYVYTSKIFNFFEMELLGCMGVRMKEVCKDGEVCIYEAIEEGQQ-KV 515
P LQ + +YT IF F+ EL + ++G + + + G + +
Sbjct: 590 PFLQTKEPVEEQCRRLYTLTIFRIFQSELAQSYNYLGLKTYEEGAISRFLVRKCGNENEK 649
Query: 516 CKINYNLSTQDISCSCKLFERMGILCRHALKAFDFNNLTQIPVQYILKRWTKEAKKGIVV 575
+ ++ S + SCSC++FE G+LCRH LK F+ ++ ++P +YIL RWTK A+ G V
Sbjct: 650 HAVTFSASNLNASCSCQMFEYEGLLCRHILKVFNLLDIRELPSRYILHRWTKNAEFGFVR 709
Query: 576 RVSNERHGLSSNTVKSVQSLRLSE 599
V + G++S +K++ L E
Sbjct: 710 DVES---GVTSQDLKALMIWSLRE 730
Score = 161 (61.7 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 48/127 (37%), Positives = 64/127 (50%)
Query: 4 SNSGKEALEGIGNDG-ELKVGTEVKSDAEAYNLCNNYAFRKGFSLRKGHVRRDAS-GNIR 61
+N+G E G+ G E VG E + EA + N+YA R GF +R G + R + G +
Sbjct: 13 TNNG--IAENEGDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVS 70
Query: 62 QRDFVCSKEGFPVDEDLCAVKRCNRLETRTGCKVLMRFTVSN-GVWVISHINFEHNHELA 120
R FVCSKEGF +L +RTGC +R + G WV+ I EHNH+L
Sbjct: 71 SRRFVCSKEGF-------------QLNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDLG 117
Query: 121 KP-EERQ 126
EE Q
Sbjct: 118 GHIEEAQ 124
Score = 132 (51.5 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 41/123 (33%), Positives = 59/123 (47%)
Query: 23 GTEVKSDAEAYNLCNNYAFRKGFSLRKGHV-RRDASGNIRQRDFVCSKEGFPVDEDLCAV 81
G E S EA YA GF +R G + R G+I R FVCSKEGF
Sbjct: 193 GLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGF--------- 243
Query: 82 KRCNRLETRTGCKVLMRFT-VSNGVWVISHINFEHNHELAKPEERQFLRSCRKIFE-ASG 139
+ +R GC MR +G W++ +N +HNH+L +P ++ +KI + +G
Sbjct: 244 ----QHPSRMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL-EPGKKN--AGMKKITDDVTG 296
Query: 140 GVD 142
G+D
Sbjct: 297 GLD 299
Score = 37 (18.1 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 505 YEAIEEGQQKVC 516
YE + EG +K+C
Sbjct: 750 YEIMREGGKKLC 761
>TAIR|locus:2129665 [details] [associations]
symbol:FAR1 "FAR-RED IMPAIRED RESPONSE 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0010018 "far-red light
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0010218 "response
to far red light" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA;IDA] [GO:0042753
"positive regulation of circadian rhythm" evidence=IMP] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010212
"response to ionizing radiation" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 EMBL:AL161540 EMBL:Z97337 GO:GO:0010018
GO:GO:0042753 PIR:F71414 PIR:T02124 EMBL:AF159587 IPI:IPI00546816
RefSeq:NP_567455.4 UniGene:At.11570 IntAct:Q9SWG3 STRING:Q9SWG3
PaxDb:Q9SWG3 PRIDE:Q9SWG3 EnsemblPlants:AT4G15090.1 GeneID:827173
KEGG:ath:AT4G15090 TAIR:At4g15090 eggNOG:NOG306101
HOGENOM:HOG000090708 InParanoid:Q9SWG3 OMA:LNLMEPP PhylomeDB:Q9SWG3
ProtClustDB:CLSN2716659 Genevestigator:Q9SWG3 InterPro:IPR018289
Pfam:PF10551 Uniprot:Q9SWG3
Length = 827
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 177/586 (30%), Positives = 289/586 (49%)
Query: 1 MDHSNSGKEALEGIGNDGELKV--GTEVKSDAEAYNLCNNYAFRKGFSLRKGHVRRDA-S 57
+D N G + G D +L+ G + + AY YA GF+ + RR +
Sbjct: 32 VDEFNIGGDV--GFSGDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKT 89
Query: 58 GNIRQRDFVCSKEGF-PVDEDLCAVKRCNRLETRTGCKVLMRFTVS-NGVWVISHINFEH 115
+ F CS+ G P E + R + ++ +T CK M +G W+I +H
Sbjct: 90 KDFIDAKFACSRYGVTPESESSGSSSRRSTVK-KTDCKASMHVKRRPDGKWIIHEFVKDH 148
Query: 116 NHELAKPEERQFLRSCRKIFEAS-GGVDVGR---RRTKPLSY-LGNDFGGDRNV-QFAKK 169
NHEL P R R + A +D+ RTK + + GG +N+ +
Sbjct: 149 NHELL-PALAYHFRIQRNVKLAEKNNIDILHAVSERTKKMYVEMSRQSGGYKNIGSLLQT 207
Query: 170 DMGNYLPREMGNMMEPGDVQGLLNYFRRKKCEDPSFFYAVQVNQLNQATNFFWRDGRSKL 229
D+ + + + +E GD Q LL YF+R K E+P FFYA+ +N+ + N FW D +S+
Sbjct: 208 DVSSQVDKGRYLALEEGDSQVLLEYFKRIKKENPKFFYAIDLNEDQRLRNLFWADAKSRD 267
Query: 230 DYDCFGDVVSFDATFRLNKYNLICAPFVGVNHHWKNMLFGCAFLLDESTHSYVWLFESFL 289
DY F DVVSFD T+ L A F+GVNHH + ML GCA + DES ++VWL +++L
Sbjct: 268 DYLSFNDVVSFDTTYVKFNDKLPLALFIGVNHHSQPMLLGCALVADESMETFVWLIKTWL 327
Query: 290 ESMGNTQPKTIFTNENEAMSKAIETVFMKTRHRLSTGHIVKDARRNLANQFANLE-FMKY 348
+MG PK I T++++ + A+ + TRH + H+++ ++ E F+
Sbjct: 328 RAMGGRAPKVILTDQDKFLMSAVSELLPNTRHCFALWHVLEKIPEYFSHVMKRHENFLLK 387
Query: 349 LNKCFYECHDETEFQVSWDDMINKFSLGDHLWLKKLYSLRDKWCLVFNSDTFSANIDSVQ 408
NKC + + EF + W M+++F L + WL L+ R KW F SD F A + + Q
Sbjct: 388 FNKCIFRSWTDDEFDMRWWKMVSQFGLENDEWLLWLHEHRQKWVPTFMSDVFLAGMSTSQ 447
Query: 409 RSDSIDTVFHQVSTKRMDVISFVQHFEEKTKEMHLDELEDDHFCKHVVPRLQVWNGILNH 468
RS+S+++ F + K++ + F++ + + + +E D H P L+ +
Sbjct: 448 RSESVNSFFDKYIHKKITLKEFLRQYGVILQNRYEEESVADFDTCHKQPALKSPSPWEKQ 507
Query: 469 AVYVYTSKIFNFFEMELLGCMGVRMKEVCKDGEVCIYEAIEEGQQKVCKINYNLSTQDIS 528
YT IF F++E+LG + ++ +D + + + + + ++ + ++
Sbjct: 508 MATTYTHTIFKKFQVEVLGVVACHPRKEKEDENMATFRVQDCEKDDDFLVTWSKTKSELC 567
Query: 529 CSCKLFERMGILCRHALKAFDFNNLTQIPVQYILKRWTKEAKKGIV 574
C C++FE G LCRHAL IP QYILKRWTK+AK G++
Sbjct: 568 CFCRMFEYKGFLCRHALMILQMCGFASIPPQYILKRWTKDAKSGVL 613
>TAIR|locus:2144930 [details] [associations]
symbol:FRS12 "FAR1-related sequence 12" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC068655
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00546450 RefSeq:NP_197397.1
UniGene:At.22319 UniGene:At.72702 PaxDb:Q3E7I5 PRIDE:Q3E7I5
EnsemblPlants:AT5G18960.1 GeneID:832014 KEGG:ath:AT5G18960
TAIR:At5g18960 eggNOG:NOG292373 HOGENOM:HOG000112649
InParanoid:Q3E7I5 OMA:GSANEAC PhylomeDB:Q3E7I5
ProtClustDB:CLSN2686747 Genevestigator:Q3E7I5 Uniprot:Q3E7I5
Length = 788
Score = 575 (207.5 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 136/475 (28%), Positives = 246/475 (51%)
Query: 141 VDVGRRRTKPLSYLGND-FGGDRNVQFAK-KDMGN-YLPREMGNMMEPGDVQGLLNYFRR 197
++ G++ + + +D GG +V + D GN ++ + N + LL+YF+
Sbjct: 299 LEPGKKNDAGMKKIPDDGTGGLDSVDLIELNDFGNNHIKKTRENRIGKEWYPLLLDYFQS 358
Query: 198 KKCEDPSFFYAVQVNQLN-QATNFFWRDGRSKLDYDCFGDVVSFDATFRLNKYNLICAPF 256
++ ED FFYAV+++ N + FW D R++ FGD V FD ++R Y++ A
Sbjct: 359 RQTEDMGFFYAVELDVNNGSCMSIFWADSRARFACSQFGDSVVFDTSYRKGSYSVPFATI 418
Query: 257 VGVNHHWKNMLFGCAFLLDESTHSYVWLFESFLESMGNTQPKTIFTNENEAMSKAIETVF 316
+G NHH + +L GCA + DES +++WLF+++L +M +P++I +++ + +A+ VF
Sbjct: 419 IGFNHHRQPVLLGCAMVADESKEAFLWLFQTWLRAMSGRRPRSIVADQDLPIQQALVQVF 478
Query: 317 MKTRHRLSTGHIVKDARRNLANQFANLEFMKYLNKCFYECHDETEFQVSWDDMINKFSLG 376
HR S I + R NL F + EF KC Y+ EF W +INK+ L
Sbjct: 479 PGAHHRYSAWQIREKERENLI-PFPS-EFKYEYEKCIYQTQTIVEFDSVWSALINKYGLR 536
Query: 377 DHLWLKKLYSLRDKWCLVFNSDTFSANIDSVQRSDSIDTVFHQVSTKRMDVISFVQHFEE 436
D +WL+++Y R+ W + +F A I + +I+ F + F+ +E+
Sbjct: 537 DDVWLREIYEQRENWVPAYLRASFFAGIPI---NGTIEPFFGASLDALTPLREFISRYEQ 593
Query: 437 KTKEMHLDELEDDHFCKHVVPRLQVWNGILNHAVYVYTSKIFNFFEMELLGCMGVRMKEV 496
++ +E ++D ++ P LQ + +YT +F F+ EL+ +
Sbjct: 594 ALEQRREEERKEDFNSYNLQPFLQTKEPVEEQCRRLYTLTVFRIFQNELVQSYNYLCLKT 653
Query: 497 CKDGEVCIYEAIEEGQQ-KVCKINYNLSTQDISCSCKLFERMGILCRHALKAFDFNNLTQ 555
++G + + + G + + + ++ S + SCSC++FE G+LCRH LK F+ ++ +
Sbjct: 654 YEEGAISRFLVRKCGNESEKHAVTFSASNLNSSCSCQMFEHEGLLCRHILKVFNLLDIRE 713
Query: 556 IPVQYILKRWTKEAKKGIVVRVSNERHGLSSNTVKS--VQSLR--LSELMHMGSN 606
+P +YIL RWTK A+ G V + + G+S+ +K+ V SLR S+ + G++
Sbjct: 714 LPSRYILHRWTKNAEFGFVRDMES---GVSAQDLKALMVWSLREAASKYIEFGTS 765
Score = 170 (64.9 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 47/121 (38%), Positives = 60/121 (49%)
Query: 1 MDHSNSGKEALEGIGNDGELKVGTEVKSDAEAYNLCNNYAFRKGFSLRKGHVRRDAS-GN 59
+ H+N E EG G+ E VG E + EA N YA R GF +R G + R + G
Sbjct: 25 LHHNNGISEDEEG-GSGVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGT 83
Query: 60 IRQRDFVCSKEGFPVDEDLCAVKRCNRLETRTGCKVLMRFTVSN-GVWVISHINFEHNHE 118
+ R FVCSKEGF +L +RTGC +R + G WV+ I EHNHE
Sbjct: 84 VSSRRFVCSKEGF-------------QLNSRTGCTAFIRVQRRDTGKWVLDQIQKEHNHE 130
Query: 119 L 119
L
Sbjct: 131 L 131
Score = 125 (49.1 bits), Expect = 4.2e-67, Sum P(2) = 4.2e-67
Identities = 40/123 (32%), Positives = 59/123 (47%)
Query: 23 GTEVKSDAEAYNLCNNYAFRKGFSLRKGHV-RRDASGNIRQRDFVCSKEGFPVDEDLCAV 81
G E S EA YA GF +R G + R G+I R FVCS+EGF
Sbjct: 214 GLEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGF--------- 264
Query: 82 KRCNRLETRTGCKVLMRFT-VSNGVWVISHINFEHNHELAKPEERQFLRSCRKI-FEASG 139
+ +R GC MR +G W++ +N +HNH+L +P ++ +KI + +G
Sbjct: 265 ----QHPSRMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL-EPGKKNDA-GMKKIPDDGTG 318
Query: 140 GVD 142
G+D
Sbjct: 319 GLD 321
Score = 37 (18.1 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 505 YEAIEEGQQKVC 516
YE + EG +K+C
Sbjct: 774 YEIMREGGKKLC 785
>TAIR|locus:2090394 [details] [associations]
symbol:FHY3 "far-red elongated hypocotyls 3" species:3702
"Arabidopsis thaliana" [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009585 "red, far-red light phototransduction" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010017 "red or far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042753 "positive regulation of circadian rhythm"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009639 "response to red or far red light"
evidence=RCA] InterPro:IPR001000 InterPro:IPR006564
InterPro:IPR007527 PROSITE:PS50966 SMART:SM00575 INTERPRO:IPR004330
Pfam:PF03101 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0046872 GO:GO:0005975 GO:GO:0007623
GO:GO:0004553 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010218 GO:GO:0009585 GO:GO:0042753 HOGENOM:HOG000090708
InterPro:IPR018289 Pfam:PF10551 EMBL:AP001306 IPI:IPI00519965
RefSeq:NP_001118673.1 RefSeq:NP_188856.2 UniGene:At.27725
STRING:Q9LIE5 PaxDb:Q9LIE5 PRIDE:Q9LIE5 EnsemblPlants:AT3G22170.1
EnsemblPlants:AT3G22170.2 GeneID:821781 KEGG:ath:AT3G22170
TAIR:At3g22170 eggNOG:NOG45392 InParanoid:Q9LIE5 OMA:ITHAERV
PhylomeDB:Q9LIE5 ProtClustDB:PLN03097 Genevestigator:Q9LIE5
Uniprot:Q9LIE5
Length = 839
Score = 629 (226.5 bits), Expect = 6.0e-68, Sum P(2) = 6.0e-68
Identities = 144/480 (30%), Positives = 235/480 (48%)
Query: 143 VGRRRTKPLSYLGNDFGGDRNVQFAKKDMGNYLPREMGNMMEPGDVQGLLNYFRRKKCED 202
V + K + + F + V K D + + +E GD + LL++ R + +
Sbjct: 190 VSEQTRKIYAAMAKQFAEYKTVISLKSDSKSSFEKGRTLSVETGDFKILLDFLSRMQSLN 249
Query: 203 PSFFYAVQVNQLNQATNFFWRDGRSKLDYDCFGDVVSFDATFRLNKYNLICAPFVGVNHH 262
+FFYAV + + N FW D +S+ +Y F DVVS D T+ NKY + A FVGVN H
Sbjct: 250 SNFFYAVDLGDDQRVKNVFWVDAKSRHNYGSFCDVVSLDTTYVRNKYKMPLAIFVGVNQH 309
Query: 263 WKNMLFGCAFLLDESTHSYVWLFESFLESMGNTQPKTIFTNENEAMSKAIETVFMKTRHR 322
++ M+ GCA + DES +Y WL E++L ++G PK + T + M+ + +F TRH
Sbjct: 310 YQYMVLGCALISDESAATYSWLMETWLRAIGGQAPKVLITELDVVMNSIVPEIFPNTRHC 369
Query: 323 LSTGHIVKDARRNLANQFANLE-FMKYLNKCFYECHDETEFQVSWDDMINKFSLGDHLWL 381
L H++ NL + FM KC Y+ + +F W + +F L D W+
Sbjct: 370 LFLWHVLMKVSENLGQVVKQHDNFMPKFEKCIYKSGKDEDFARKWYKNLARFGLKDDQWM 429
Query: 382 KKLYSLRDKWCLVFNSDTFSANIDSVQRSDSIDTVFHQVSTKRMDVISFVQHFEEKTKEM 441
LY R KW + +D A + + QR+DSI+ F + K+ V FV+ ++ ++
Sbjct: 430 ISLYEDRKKWAPTYMTDVLLAGMSTSQRADSINAFFDKYMHKKTSVQEFVKVYDTVLQDR 489
Query: 442 HLDELEDDHFCKHVVPRLQVWNGILNHAVYVYTSKIFNFFEMELLGCMGVRMKEVCKDGE 501
+E + D + P ++ + VYT +F F++E+LG + +E +D
Sbjct: 490 CEEEAKADSEMWNKQPAMKSPSPFEKSVSEVYTPAVFKKFQIEVLGAIACSPREENRDAT 549
Query: 502 VCIYEAIEEGQQKVCKINYNLSTQDISCSCKLFERMGILCRHALKAFDFNNLTQIPVQYI 561
+ + + + +N + ++SC C+LFE G LCRH L +L+ IP QYI
Sbjct: 550 CSTFRVQDFENNQDFMVTWNQTKAEVSCICRLFEYKGYLCRHTLNVLQCCHLSSIPSQYI 609
Query: 562 LKRWTKEAKKGIVVRVSNERHGLSSNTVK----SVQSLRLSELMHMGSNVYSIASLSDSG 617
LKRWTK+AK S E L + ++ ++L+L+E + Y+IA L+ G
Sbjct: 610 LKRWTKDAKSR---HFSGEPQQLQTRLLRYNDLCERALKLNEEASLSQESYNIAFLAIEG 666
Score = 79 (32.9 bits), Expect = 6.0e-68, Sum P(2) = 6.0e-68
Identities = 36/130 (27%), Positives = 52/130 (40%)
Query: 23 GTEVKSDAEAYNLCNNYAFRKGFSLRKGHVRRD-ASGNIRQRDFVCSKEGFPVDEDLCAV 81
G E +S EAY+ Y+ GF+ + RR + F CS+ G + D
Sbjct: 73 GMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDKSFN 132
Query: 82 K---RCNRLE----------TRTGCKVLMRFTVS-NGVWVISHINFEHNHELAKPEERQF 127
+ R ++ + +T CK M +G WVI EHNHEL P +
Sbjct: 133 RPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHELL-PAQA-V 190
Query: 128 LRSCRKIFEA 137
RKI+ A
Sbjct: 191 SEQTRKIYAA 200
>TAIR|locus:2014639 [details] [associations]
symbol:FRS4 "FAR1-related sequence 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009978 EMBL:AC012394 HOGENOM:HOG000090708 InterPro:IPR018289
Pfam:PF10551 EMBL:BT010456 EMBL:AK221406 IPI:IPI00535818
IPI:IPI00657192 PIR:G96790 RefSeq:NP_001031286.1 RefSeq:NP_177759.1
UniGene:At.34672 PaxDb:Q6NQJ7 PRIDE:Q6NQJ7 GeneID:843965
KEGG:ath:AT1G76320 TAIR:At1g76320 eggNOG:NOG261993
InParanoid:Q9SGQ3 OMA:KIGCKAS ProtClustDB:CLSN2682748
Genevestigator:Q6NQJ7 Uniprot:Q6NQJ7
Length = 732
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 172/575 (29%), Positives = 283/575 (49%)
Query: 25 EVKSDAEAYNLCNNYAFRKGFSLRKGHVRRD-ASGNIRQRDFVCSKEGFPVDEDLCAVKR 83
E ++ +AY +YA GF K RR AS F C + G D A+
Sbjct: 2 EFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSD-DAINP 60
Query: 84 CNRLETRTGCKVLMRFTVS-NGVWVISHINFEHNHELAKPEERQFLRSCRKI-FEASGGV 141
R + GCK M +G W + EHNH+L PE+ + RS R S
Sbjct: 61 --RASPKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLL-PEQAHYFRSHRNTELVKSNDS 117
Query: 142 DVGRRRTKPLSYLGNDFGGDRNVQFAKKDMGNYLPREMGNMMEPGDVQGLLNYFRRKKCE 201
+ R++ PL+ + ++ F M N + +++ GD + LL + R + E
Sbjct: 118 RLRRKKNTPLTDCKH-LSAYHDLDFIDGYMRNQHDKGRRLVLDTGDAEILLEFLMRMQEE 176
Query: 202 DPSFFYAVQVNQLNQATNFFWRDGRSKLDYDCFGDVVSFDATFRLNKYNLICAPFVGVNH 261
+P FF+AV ++ + N FW D + DY F DVVSF+ ++ ++KY + FVGVNH
Sbjct: 177 NPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVVSFETSYFVSKYKVPLVLFVGVNH 236
Query: 262 HWKNMLFGCAFLLDESTHSYVWLFESFLESMGNTQPKTIFTNENEAMSKAIETVFMKTRH 321
H + +L GC L D++ ++YVWL +S+L +MG +PK + T++N A+ AI V +TRH
Sbjct: 237 HVQPVLLGCGLLADDTVYTYVWLMQSWLVAMGGQKPKVMLTDQNNAIKAAIAAVLPETRH 296
Query: 322 RLSTGHIVKDARRNLANQFANLE--FMKYLNKCFYECHDETEFQVSWDDMINKFSLGDHL 379
H++ RNL + ++ + FMK L KC Y E EF W +I+KF L D
Sbjct: 297 CYCLWHVLDQLPRNL-DYWSMWQDTFMKKLFKCIYRSWSEEEFDRRWLKLIDKFHLRDVP 355
Query: 380 WLKKLYSLRDKWCLVFNSDTFSANIDSVQRSDSIDTVFHQVSTKRMDVISFVQHFEEKTK 439
W++ LY R W F A + RS+S++++F + + F++ + +
Sbjct: 356 WMRSLYEERKFWAPTFMRGITFAGLSMRCRSESVNSLFDRYVHPETSLKEFLEGYGLMLE 415
Query: 440 EMHLDELEDDHFCKHVVPRLQVWNGILNHAVYVYTSKIFNFFEMELLGCMGVRMKEVCKD 499
+ + +E + D H P L+ + + VY+ +IF F++E+LG + + ++
Sbjct: 416 DRYEEEAKADFDAWHEAPELKSPSPFEKQMLLVYSHEIFRRFQLEVLGAAACHLTKESEE 475
Query: 500 GEVCIYEAIEEGQQKVCKINYNLSTQDISCSCKLFERMGILCRHALKAFDFNNLTQIPVQ 559
G + ++ Q+ + ++++ DI CSC+ FE G LCRHA+ + + IP+
Sbjct: 476 GTTYSVKDFDDEQKYL--VDWDEFKSDIYCSCRSFEYKGYLCRHAIVVLQMSGVFTIPIN 533
Query: 560 YILKRWTKEAKKGIVVRVSNERHGLSSNTVKSVQS 594
Y+L+RWT A+ RH +S N ++ VQS
Sbjct: 534 YVLQRWTNAARN---------RHQISRN-LELVQS 558
>TAIR|locus:2059304 [details] [associations]
symbol:FRS3 "FAR1-related sequence 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC005623 InterPro:IPR018289 Pfam:PF10551
EMBL:AY057491 EMBL:BT002690 IPI:IPI00526037 IPI:IPI00657216
PIR:H84668 RefSeq:NP_001031428.1 RefSeq:NP_565636.1
RefSeq:NP_850098.1 UniGene:At.22269 IntAct:Q9ZVC9 PaxDb:Q9ZVC9
PRIDE:Q9ZVC9 EnsemblPlants:AT2G27110.1 EnsemblPlants:AT2G27110.2
GeneID:817253 KEGG:ath:AT2G27110 TAIR:At2g27110 eggNOG:NOG302035
HOGENOM:HOG000241939 InParanoid:Q9ZVC9 OMA:LWPRQDE PhylomeDB:Q9ZVC9
ProtClustDB:CLSN2688464 Genevestigator:Q9ZVC9 Uniprot:Q9ZVC9
Length = 851
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 174/561 (31%), Positives = 274/561 (48%)
Query: 74 VDEDLCAV--KRCNRLETRTGCKVLMRFTVS-NGVWVISHINFEHNHELAKPEERQFLRS 130
V E +C+ KR R + + C ++R + + WV++ EH H LA LR
Sbjct: 88 VREFVCSSSSKRSKRRLSES-CDAMVRIELQGHEKWVVTKFVKEHTHGLASSNMLHCLRP 146
Query: 131 CRKIFEAS-GGVDVGRRRTKPLSYLGNDFGGDRNVQFAKKDMGNYLPREMGNMMEPGDVQ 189
R + G + Y+ D R + A M R +G D
Sbjct: 147 RRHFANSEKSSYQEGVNVPSGMMYVSMD-ANSRGARNAS--MATNTKRTIGR-----DAH 198
Query: 190 GLLNYFRRKKCEDPSFFYAVQVNQLNQATNFFWRDGRSKLDYDCFGDVVSFDATFRLNKY 249
LL YF+R + E+P FFYAVQ+++ NQ +N FW D RS++ Y FGD V+ D +R N++
Sbjct: 199 NLLEYFKRMQAENPGFFYAVQLDEDNQMSNVFWADSRSRVAYTHFGDTVTLDTRYRCNQF 258
Query: 250 NLICAPFVGVNHHWKNMLFGCAFLLDESTHSYVWLFESFLESMGNTQPKTIFTNENEAMS 309
+ APF GVNHH + +LFGCA +LDES S++WLF++FL +M + P ++ T+++ A+
Sbjct: 259 RVPFAPFTGVNHHGQAILFGCALILDESDTSFIWLFKTFLTAMRDQPPVSLVTDQDRAIQ 318
Query: 310 KAIETVFMKTRHRLSTGHIVKDARRNLANQ-FANLEFMKYLNKCFYECHDETEFQVSWDD 368
A VF RH ++ ++++ + LA+ A F L C EF+ SW
Sbjct: 319 IAAGQVFPGARHCINKWDVLREGQEKLAHVCLAYPSFQVELYNCINFTETIEEFESSWSS 378
Query: 369 MINKFSLGDHLWLKKLYSLRDKWCLVFNSDTFSANIDSVQR-SDSI-DTVFHQVSTKRMD 426
+I+K+ LG H WL LY+ R +W V+ D+F A + Q S S D +Q +T M
Sbjct: 379 VIDKYDLGRHEWLNSLYNARAQWVPVYFRDSFFAAVFPSQGYSGSFFDGYVNQQTTLPM- 437
Query: 427 VISFVQHFEEKTKEMHLDELEDDHFCKHVVPRLQVWNGILNHAVYVYTSKIFNFFEMELL 486
F + +E + E+E D + P L+ + + N A ++T KIF F+ EL+
Sbjct: 438 ---FFRLYERAMESWFEMEIEADLDTVNTPPVLKTPSPMENQAANLFTRKIFGKFQEELV 494
Query: 487 GCMGVRMKEVCKDGEVCIYEAIE-EGQQKVCKINYNLSTQDISCSCKLFERMGILCRHAL 545
+ DG + E K + + +CSC++FE GILCRH L
Sbjct: 495 ETFAHTANRIEDDGTTSTFRVANFENDNKAYIVTFCYPEMRANCSCQMFEHSGILCRHVL 554
Query: 546 KAFDFNNLTQIPVQYILKRWTKEAKKGIVV--RVSNERHGLSSNTVKSV--QSLRLSELM 601
F N+ +P YIL+RWT+ AK + + VS H S + + ++++ +E
Sbjct: 555 TVFTVTNILTLPPHYILRRWTRNAKSMVELDEHVSENGHDSSIHRYNHLCREAIKYAEEG 614
Query: 602 HMGSNVYSIA--SLSDSGTKI 620
+ + Y+IA L + G K+
Sbjct: 615 AITAEAYNIALGQLREGGKKV 635
>TAIR|locus:2035144 [details] [associations]
symbol:FRS6 "FAR1-related sequence 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC008016 InterPro:IPR018289 Pfam:PF10551 EMBL:AY080775
EMBL:AY133776 IPI:IPI00532825 PIR:G96565 RefSeq:NP_175661.1
UniGene:At.37583 PRIDE:Q9SSQ4 EnsemblPlants:AT1G52520.1
GeneID:841683 KEGG:ath:AT1G52520 TAIR:At1g52520 eggNOG:NOG287780
HOGENOM:HOG000112651 InParanoid:Q9SSQ4 OMA:LELMCCK PhylomeDB:Q9SSQ4
ProtClustDB:CLSN2679731 Genevestigator:Q9SSQ4 Uniprot:Q9SSQ4
Length = 703
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 166/563 (29%), Positives = 259/563 (46%)
Query: 22 VGTEVKSDAEAYNLCNNYAFRKGFSLR-KGHVRRDASGNIRQRDFVCSKEGFPVDEDLCA 80
VG E +S +AYN N YA GF +R K + S CS +GF D+
Sbjct: 87 VGMEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAVLCCSSQGFKRINDVNR 146
Query: 81 VKRCNRLETRTGCKVLMRFT-VSNGVWVISHINFEHNHELAKPEERQFLRSCRKIFEASG 139
V++ ETRTGC ++R V + W + + +HNH L + R RK +S
Sbjct: 147 VRK----ETRTGCPAMIRMRQVDSKRWRVVEVTLDHNHLLGCKLYKSVKRK-RKCV-SSP 200
Query: 140 GVDVGRRRTKPLSYLGNDFGGDRNVQFAKKDMGNYLPREMGNMMEPGDVQGLLNYFRRKK 199
D + + N + N KK + ++ N+ GD + NYF R +
Sbjct: 201 VSDAKTIKLYRACVVDNGSNVNPNSTLNKKFQNSTGSPDLLNLKR-GDSAAIYNYFCRMQ 259
Query: 200 CEDPSFFYAVQVNQLNQATNFFWRDGRSKLDYDCFGDVVSFDATFRLNKYNLICAPFVGV 259
+P+FFY + VN Q N FW D SK+ FGDV+ D+++ K+ + F GV
Sbjct: 260 LTNPNFFYLMDVNDEGQLRNVFWADAFSKVSCSYFGDVIFIDSSYISGKFEIPLVTFTGV 319
Query: 260 NHHWKNMLFGCAFLLDESTHSYVWLFESFLESMGNTQPKTIFTNENEAMSKAIETVFMKT 319
NHH K L C FL E+ SY WL + +L M + P+TI T+ + + AI VF ++
Sbjct: 320 NHHGKTTLLSCGFLAGETMESYHWLLKVWLSVMKRS-PQTIVTDRCKPLEAAISQVFPRS 378
Query: 320 RHRLSTGHIVKDARRNLANQFANLEFMKYLNKCFYECHDETEFQVSWDDMINKFSLGDHL 379
R S HI++ L K K YE EF+ +W M++ F + ++
Sbjct: 379 HQRFSLTHIMRKIPEKLGGLHNYDAVRKAFTKAVYETLKVVEFEAAWGFMVHNFGVIENE 438
Query: 380 WLKKLYSLRDKWCLVFNSDTFSANIDSVQRSDSIDTVFHQVSTKRMDVISFVQHFEEKTK 439
WL+ LY R KW V+ DTF A I + +++ F + K+ + F+ +E +
Sbjct: 439 WLRSLYEERAKWAPVYLKDTFFAGIAAAHPGETLKPFFERYVHKQTPLKEFLDKYELALQ 498
Query: 440 EMHLDELEDDHFCKHV-VPRLQVWNGILNHAVYVYTSKIFNFFEME---LLGCMGVRMKE 495
+ H +E D + + L+ +YT +F F++E + C
Sbjct: 499 KKHREETLSDIESQTLNTAELKTKCSFETQLSRIYTRDMFKKFQIEVEEMYSCFSTTQVH 558
Query: 496 VCKDGEVCIY---EAI--EEGQQKV--CKINYNLSTQDISCSCKLFERMGILCRHALKAF 548
V DG I+ E + E ++++ ++ YN S ++ C C F G LCRHAL
Sbjct: 559 V--DGPFVIFLVKERVRGESSRREIRDFEVLYNRSVGEVRCICSCFNFYGYLCRHALCVL 616
Query: 549 DFNNLTQIPVQYILKRWTKEAKK 571
+FN + +IP++YIL RW K+ K+
Sbjct: 617 NFNGVEEIPLRYILPRWRKDYKR 639
>TAIR|locus:2062606 [details] [associations]
symbol:FRS2 "FAR1-related sequence 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC005700
HOGENOM:HOG000090708 InterPro:IPR018289 Pfam:PF10551 EMBL:AK228730
EMBL:AK221503 IPI:IPI00520357 IPI:IPI00530517 PIR:G84730
RefSeq:NP_001077991.1 RefSeq:NP_001118431.1 RefSeq:NP_180784.2
RefSeq:NP_973580.1 UniGene:At.13189 UniGene:At.67147
EnsemblPlants:AT2G32250.1 EnsemblPlants:AT2G32250.3 GeneID:817785
KEGG:ath:AT2G32250 TAIR:At2g32250 eggNOG:NOG304016
InParanoid:Q3EBQ3 OMA:CKHAILV PhylomeDB:Q3EBQ3
ProtClustDB:CLSN2681190 Genevestigator:Q3EBQ3 Uniprot:Q3EBQ3
Length = 807
Score = 521 (188.5 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 131/442 (29%), Positives = 211/442 (47%)
Query: 183 MEPGDVQGLLNYFRRKKCEDPSFFYAVQVNQLNQATNFFWRDGRSKLDYDCFGDVVSFDA 242
+E D++ LL +F + + P FFYAV + + N FW D ++K DY F DVV FD
Sbjct: 165 LEEEDLKLLLEHFMEMQDKQPGFFYAVDFDSDKRVRNVFWLDAKAKHDYCSFSDVVLFDT 224
Query: 243 TFRLNKYNLICAPFVGVNHHWKNMLFGCAFLLDESTHSYVWLFESFLESMGNTQPKTIFT 302
+ N Y + APF+GV+HH + +L GCA + + S +Y WLF ++L+++G P + T
Sbjct: 225 FYVRNGYRIPFAPFIGVSHHRQYVLLGCALIGEVSESTYSWLFRTWLKAVGGQAPGVMIT 284
Query: 303 NENEAMSKAIETVFMKTRHRLSTGHIVKDARRNLANQFANLE--FMKYLNKCFYECHDET 360
++++ +S + VF RH ++ L N F + + FM+ C +
Sbjct: 285 DQDKLLSDIVVEVFPDVRHIFCLWSVLSKISEML-NPFVSQDDGFMESFGNCVASSWTDE 343
Query: 361 EFQVSWDDMINKFSLGDHLWLKKLYSLRDKWCLVFNSDTFSANIDSVQRSDSIDTVFHQV 420
F+ W +MI KF L ++ W++ L+ R KW + A + +RS SI + F +
Sbjct: 344 HFERRWSNMIGKFELNENEWVQLLFRDRKKWVPHYFHGICLAGLSGPERSGSIASHFDKY 403
Query: 421 STKRMDVISFVQHFEEKTKEMHLD-ELEDDHFCKHVVPRLQVWNGILNHAVYVYTSKIFN 479
F + + K + D E +DD + P L+ +YT F
Sbjct: 404 MNSEATFKDFFELYM-KFLQYRCDVEAKDDLEYQSKQPTLRSSLAFEKQLSLIYTDAAFK 462
Query: 480 FFEMELLGCMGVRMKEVCKDGEVCIY--EAIEEGQQKVCKINYNLSTQDISCSCKLFERM 537
F+ E+ G + ++++ +DG I+ E EE Q +N L D CSC LFE
Sbjct: 463 KFQAEVPGVVSCQLQKEREDGTTAIFRIEDFEERQNFFVALNNELL--DACCSCHLFEYQ 520
Query: 538 GILCRHALKAFDFNNLTQIPVQYILKRWTKEAKKGIVVRVSNERHGLSSNTVKSVQSLRL 597
G LC+HA+ +++++P QYILKRW+K KG N++ N + R
Sbjct: 521 GFLCKHAILVLQSADVSRVPSQYILKRWSK---KGNNKEDKNDKCATIDNRMA-----RF 572
Query: 598 SELMHMGSNVYSIASLSDSGTK 619
+L + +ASLSD K
Sbjct: 573 DDLCRRFVKLGVVASLSDEACK 594
Score = 94 (38.1 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 33/108 (30%), Positives = 46/108 (42%)
Query: 19 ELKVGTEVKSDAEAYNLCNNYAFRKGFSLR-KGHVRRDASGNIRQRDFVCSKEGFPVDED 77
EL+ G + +S AY YA GF + K R SG CS+ G E
Sbjct: 37 ELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTK-REK 95
Query: 78 LCAVKRCNRLETRTGCKVLMRFT-VSNGVWVISHINFEHNHELAKPEE 124
A+ R +TGCK + + WVI + EHNHE+ P++
Sbjct: 96 ATAINP--RSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEIC-PDD 140
>TAIR|locus:2121003 [details] [associations]
symbol:FRS9 "FAR1-related sequence 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 EMBL:AL035538 EMBL:AL161593 InterPro:IPR018289
Pfam:PF10551 HOGENOM:HOG000241939 UniGene:At.31195 UniGene:At.48951
EMBL:BX827635 EMBL:AK229615 IPI:IPI00517549 PIR:T05644
RefSeq:NP_195530.2 PaxDb:Q9SZL7 PRIDE:Q9SZL7
EnsemblPlants:AT4G38170.1 GeneID:829973 KEGG:ath:AT4G38170
TAIR:At4g38170 eggNOG:NOG320990 InParanoid:Q9SZL7 OMA:RCEVYRA
Genevestigator:Q9SZL7 Uniprot:Q9SZL7
Length = 545
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 130/447 (29%), Positives = 229/447 (51%)
Query: 188 VQGLLNYFRRKKCEDPSFFYAVQVNQLNQATNFFWRDGRSKLDYDCFGDVVSFDATFRLN 247
V+ +LNY +R++ E+P F YA++ + N FW D +L+Y FGD + FD T+R
Sbjct: 18 VEHVLNYLKRRQLENPGFLYAIE----DDCGNVFWADPTCRLNYTYFGDTLVFDTTYRRG 73
Query: 248 K-YNLICAPFVGVNHHWKNMLFGCAFLLDESTHSYVWLFESFLESMGNTQPKTIFTNENE 306
K Y + A F G NHH + +LFGCA +L+ES S+ WLF+++L++M P +I +
Sbjct: 74 KRYQVPFAAFTGFNHHGQPVLFGCALILNESESSFAWLFQTWLQAMSAPPPPSITVEPDR 133
Query: 307 AMSKAIETVFMKTRHRLSTGHIVKDARRNLANQF-ANLEFMKYLNKCFYECHDETEFQVS 365
+ A+ VF +TR R S I ++ LA+ F A+ F C E EF+ S
Sbjct: 134 LIQVAVSRVFSQTRLRFSQPLIFEETEEKLAHVFQAHPTFESEFINCVTETETAAEFEAS 193
Query: 366 WDDMINKFSLGDHLWLKKLYSLRDKWCLVFNSDTFSANIDSVQRSDSIDTVFHQVSTKRM 425
WD ++ ++ + D+ WL+ +Y+ R +W VF DTF + + + S +++ F
Sbjct: 194 WDSIVRRYYMEDNDWLQSIYNARQQWVRVFIRDTFYGELSTNEGSSILNSFFQGFVDAST 253
Query: 426 DVISFVQHFEEKTKEMHLDELEDDHFCKHVVPRLQVWNGILNHAVYVYTSKIFNFFEMEL 485
+ ++ +E+ EL+ D+ + P ++ + + A +YT F F+ E
Sbjct: 254 TMQMLIKQYEKAIDSWREKELKADYEATNSTPVMKTPSPMEKQAASLYTRAAFIKFQEEF 313
Query: 486 LGCMGVRMKEVCKDGEVCIYEAIEEGQ-QKVCKINYNLSTQDISCSCKLFERMGILCRHA 544
+ + + + G Y + G+ K ++++ +CSC++FE GI+CRH
Sbjct: 314 VETLAIPANIISDSGTHTTYRVAKFGEVHKGHTVSFDSLEVKANCSCQMFEYSGIICRHI 373
Query: 545 LKAFDFNNLTQIPVQYILKRWTKEAKKGIVVRVSNERHGLSSNTVKSVQ----SLR--LS 598
L F N+ +P +Y+L+RWTKEAK +R + E+ S+ +S+ SLR +
Sbjct: 374 LAVFSAKNVLALPSRYLLRRWTKEAK----IRGTEEQPEFSNGCQESLNLCFNSLRQEAT 429
Query: 599 ELMHMGSN---VYSIA--SLSDSGTKI 620
+ + G+ +Y +A +L ++ K+
Sbjct: 430 KYVEEGAKSIQIYKVAMDALDEAAKKV 456
>TAIR|locus:2016259 [details] [associations]
symbol:FRS8 "FAR1-related sequence 8" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009322 EMBL:AC011717 InterPro:IPR018289 Pfam:PF10551
HOGENOM:HOG000112651 IPI:IPI00534750 PIR:E96831 RefSeq:NP_178118.2
UniGene:At.52575 PRIDE:Q9S793 EnsemblPlants:AT1G80010.1
GeneID:844341 KEGG:ath:AT1G80010 TAIR:At1g80010 eggNOG:NOG311954
InParanoid:Q9S793 OMA:FAIRVKS Genevestigator:Q9S793 Uniprot:Q9S793
Length = 725
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 160/583 (27%), Positives = 266/583 (45%)
Query: 23 GTEVKSDAEAYNLCNNYAFRKGFSLR-KGHVRRDASGNIRQRDFVCSKEGFPVDEDLCAV 81
G E +S +AY+ N+YA GF++R K + S R C+ +GF + +D A
Sbjct: 98 GMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCQGFKLLKD--AH 155
Query: 82 KRCNRLETRTGCKVLMRFTVSN-GVWVISHINFEHNHELAKPEERQFLRSCRKIFEASGG 140
R R ETRTGC+ ++R + + W + + +HNH P+ +S +K ++
Sbjct: 156 SR--RKETRTGCQAMIRLRLIHFDRWKVDQVKLDHNHSF-DPQRAHNSKSHKKSSSSASP 212
Query: 141 VD---------VGRRRTKPLSYLGNDFGGDRNVQFAKKDMGNY-LPR-EMGNMME-PGDV 188
V R K L D + + + L + +E G
Sbjct: 213 ATKTNPEPPPHVQVRTIKLYRTLALDTPPALGTSLSSGETSDLSLDHFQSSRRLELRGGF 272
Query: 189 QGLLNYFRRKKCEDPSFFYAVQVNQLNQATNFFWRDGRSKLDYDCFGDVVSFDATFRLNK 248
+ L ++F + + P+F Y + + N FW D R++ Y FGDV+ FD T N
Sbjct: 273 RALQDFFFQIQLSSPNFLYLMDLADDGSLRNVFWIDARARAAYSHFGDVLLFDTTCLSNA 332
Query: 249 YNLICAPFVGVNHHWKNMLFGCAFLLDESTHSYVWLFESFLESMGNTQPKTIFTNENEAM 308
Y L FVG+NHH +L GC L D+S +YVWLF ++L M P+ T + +AM
Sbjct: 333 YELPLVAFVGINHHGDTILLGCGLLADQSFETYVWLFRAWLTCMLGRPPQIFITEQCKAM 392
Query: 309 SKAIETVFMKTRHRLSTGHIVKDARRNLAN-QFANLEFMKYLNKCFYECHDETEFQVSWD 367
A+ VF + HRLS H++ + +++ Q ++L F LN+ Y C EF+ +W+
Sbjct: 393 RTAVSEVFPRAHHRLSLTHVLHNICQSVVQLQDSDL-FPMALNRVVYGCLKVEEFETAWE 451
Query: 368 DMINKFSLGDHLWLKKLYSLRDKWCLVFNSDTFSANIDSVQRSD-SIDTVFHQVSTKRMD 426
+MI +F + ++ ++ ++ R+ W V+ DTF A + + + +F +
Sbjct: 452 EMIIRFGMTNNETIRDMFQDRELWAPVYLKDTFLAGALTFPLGNVAAPFIFSGYVHENTS 511
Query: 427 VISFVQHFEEKTKEMHLDELEDDHFCKHVVPRLQVWNGILNHAVYVYTSKIFNFFEME-- 484
+ F++ +E + + E D ++P+L+ + + V+T +IF F+ E
Sbjct: 512 LREFLEGYESFLDKKYTREALCDSESLKLIPKLKTTHPYESQMAKVFTMEIFRRFQDEVS 571
Query: 485 -LLGCMGVRMKEVCKDGEVCIYEAIEEGQQKV--CKINYNLSTQ-DISCSCKL--FERMG 538
+ C GV +V +G Y E KV ++ Y S + C C F G
Sbjct: 572 AMSSCFGVT--QVHSNGSASSYVVKEREGDKVRDFEVIYETSAAAQVRCFCVCGGFSFNG 629
Query: 539 ILCRHALKAFDFNNLTQIPVQYILKRWTKEAKKGIVVRVSNER 581
CRH L N L ++P QYIL+RW K+ K+ V + R
Sbjct: 630 YQCRHVLLLLSHNGLQEVPPQYILQRWRKDVKRLYVAEFGSGR 672
>TAIR|locus:2182778 [details] [associations]
symbol:FRS10 "FAR1-related sequence 10" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AF262043
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00525509 RefSeq:NP_198205.2
UniGene:At.55070 PaxDb:Q9LKR4 EnsemblPlants:AT5G28530.1
GeneID:832948 KEGG:ath:AT5G28530 TAIR:At5g28530 eggNOG:NOG320567
HOGENOM:HOG000006468 OMA:DECAQAF PhylomeDB:Q9LKR4
ProtClustDB:CLSN2687754 Genevestigator:Q9LKR4 Uniprot:Q9LKR4
Length = 685
Score = 403 (146.9 bits), Expect = 3.6e-46, Sum P(2) = 3.6e-46
Identities = 135/515 (26%), Positives = 220/515 (42%)
Query: 106 WVISHINFEHNHELAKPEERQFLRSCRKIFEAS---------GGVDVGRRRTKPLSYLGN 156
W +S + HNHEL + ++ + L + RKI ++ G V R K L
Sbjct: 146 WYVSQFSNVHNHELLEDDQVRLLPAYRKIQQSDQERILLLSKAGFPVNRI-VKLLELEKG 204
Query: 157 DFGGDRNVQFAKKDMGNYLPREMGNMME---------PGDVQGLLNYFRRKKCEDPSFFY 207
G + F +KD+ N++ ++ E D LL + D F Y
Sbjct: 205 VVSGQ--LPFIEKDVRNFVRACKKSVQENDAFMTEKRESDTLELLECCKGLAERDMDFVY 262
Query: 208 AVQVNQLNQATNFFWRDGRSKLDYDCFGDVVSFDATFRLNKYNLICAPFVGVNHHWKNML 267
++ + N W G S Y FGDVV FD ++R Y L+ F G++++ K ML
Sbjct: 263 DCTSDENQKVENIAWAYGDSVRGYSLFGDVVVFDTSYRSVPYGLLLGVFFGIDNNGKAML 322
Query: 268 FGCAFLLDESTHSYVWLFESFLESMGNTQPKTIFTNENEAMSKAIETVFMKTRHRLSTGH 327
GC L DES S+ W ++F+ M P+TI T+ + + AI T H + H
Sbjct: 323 LGCVLLQDESCRSFTWALQTFVRFMRGRHPQTILTDIDTGLKDAIGREMPNTNHVVFMSH 382
Query: 328 IVKDARRNLANQFANLEFMKYLN-KCFYE--CH--DETEFQVSWDDMINKFSLGDHLWLK 382
IV LA+ F+ Y + ++ C + EF+ WD ++ +F L
Sbjct: 383 IVS----KLASWFSQTLGSHYEEFRAGFDMLCRAGNVDEFEQQWDLLVTRFGLVPDRHAA 438
Query: 383 KLYSLRDKWCLVFNSDTFSANIDSVQRSDSIDTVFHQVSTKRMDVISFVQHF-EEKTKEM 441
LYS R W + F A + + + SID+ +V +D + +Q EE ++
Sbjct: 439 LLYSCRASWLPCCIREHFVAQTMTSEFNLSIDSFLKRV----VDGATCMQLLLEESALQV 494
Query: 442 HLD-ELEDDHFCKHVVPRLQVWNGILNHAVYVYTSKIFNFFEMELLGCMGVRMKEVCKDG 500
L + P L+ + +HA + T F+ + E++ + + E+
Sbjct: 495 SAAASLAKQILPRFTYPSLKTCMPMEDHARGILTPYAFSVLQNEMVLSVQYAVAEMANGP 554
Query: 501 EVCIYEAIEEGQQKVCKINYNLSTQDISCSCKLFERMGILCRHALKAFDFNNLTQIPVQY 560
+ + EG+ C + +N ++I CSCK FE GILCRH L+ N IP QY
Sbjct: 555 FIVHHYKKMEGE---CCVIWNPENEEIQCSCKEFEHSGILCRHTLRVLTVKNCFHIPEQY 611
Query: 561 ILKRWTKEAKKGIVVRVSNERHGLSSNTVKSVQSL 595
L RW +E+ V + G+ ++ ++ SL
Sbjct: 612 FLLRWRQESPH--VATENQNGQGIGDDSAQTFHSL 644
Score = 148 (57.2 bits), Expect = 3.6e-46, Sum P(2) = 3.6e-46
Identities = 38/118 (32%), Positives = 59/118 (50%)
Query: 22 VGTEVKSDAEAYNLCNNYAFRKGFSLRKGHVRRDASGNIRQRDFVCSKEGFPVDEDLCAV 81
VG +D EA+ + +A + GFS+RK + + +RDFVC + GF V
Sbjct: 57 VGQIFTTDDEAFEYYSTFARKSGFSIRKARSTESQNLGVYRRDFVCYRSGFNQPRKKANV 116
Query: 82 KRCN-RLETRTGC--KVLMRFTVSNGV--WVISHINFEHNHELAKPEERQFLRSCRKI 134
+ R R GC K+ + V +GV W +S + HNHEL + ++ + L + RKI
Sbjct: 117 EHPRERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLLPAYRKI 174
Score = 39 (18.8 bits), Expect = 9.9e-35, Sum P(2) = 9.9e-35
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 15 GNDGELKVGTEVKSDAE-----AYNLCNNYAFRKGFSLRKGHVRRDASGNIRQRDFVCSK 69
G DG+L + EV ++ +N+ + +R R + ++R + SK
Sbjct: 128 GCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLLPAYRKIQQSDQERILLLSK 187
Query: 70 EGFPVD 75
GFPV+
Sbjct: 188 AGFPVN 193
>TAIR|locus:2012828 [details] [associations]
symbol:FRS11 "FAR1-related sequence 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC005489 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000006468
ProtClustDB:CLSN2687754 EMBL:AF424595 EMBL:BT000486 IPI:IPI00517858
RefSeq:NP_563865.1 UniGene:At.26302 IntAct:Q9SY66 PaxDb:Q9SY66
PRIDE:Q9SY66 EnsemblPlants:AT1G10240.1 GeneID:837563
KEGG:ath:AT1G10240 TAIR:At1g10240 eggNOG:NOG258635
InParanoid:Q9SY66 OMA:IRRHRTE PhylomeDB:Q9SY66
Genevestigator:Q9SY66 Uniprot:Q9SY66
Length = 680
Score = 466 (169.1 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 151/590 (25%), Positives = 263/590 (44%)
Query: 32 AYNLCNNYAFRKGFSLRKGHVR-RDASGN-IRQRDFVCSKEGFPVDEDLCAVK-RCNRLE 88
AY + +A R GFS+R+ +D G + +R FVC + G + L K + NR
Sbjct: 60 AYEFYSTFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKTLSEGKPQRNRRS 119
Query: 89 TRTGCKVLMRFT----VSNGVWVISHINFEHNHELAKPEERQFLRSCRKIFEASGGVDVG 144
+R GC+ +R + + + W ++ HNHEL +P + +FL + R I +A +
Sbjct: 120 SRCGCQAYLRISKLTELGSTEWRVTGFANHHNHELLEPNQVRFLPAYRSISDADKSRILM 179
Query: 145 RRRTK-PLSYLGNDFGGDRNVQ-----FAKKDMGNYLPREMGNMMEPGDVQ-GLLNYFRR 197
+T + + ++ V+ F +KD+ N L + ++P D L +
Sbjct: 180 FSKTGISVQQMMRLLELEKCVEPGFLPFTEKDVRNLL--QSFKKLDPEDENIDFLRMCQS 237
Query: 198 KKCEDPSFFYAVQVNQLNQATNFFWRDGRSKLDYDCFGDVVSFDATFRLNKYNLICAPFV 257
K +DP+F + ++ ++ N W S Y+ FGD V FD T RL+ + +V
Sbjct: 238 IKEKDPNFKFEFTLDANDKLENIAWSYASSIQSYELFGDAVVFDTTHRLSAVEMPLGIWV 297
Query: 258 GVNHHWKNMLFGCAFLLDESTHSYVWLFESFLESMGNTQPKTIFTNENEAMSKAIETVFM 317
GVN++ FGC L DE+ S+ W ++F M P+TI T+ N + +AI
Sbjct: 298 GVNNYGVPCFFGCVLLRDENLRSWSWALQAFTGFMNGKAPQTILTDHNMCLKEAIAGEMP 357
Query: 318 KTRHRLSTGHIVKDA----RRNLANQFANLEFMKYLNKCFYECHDETEFQVSWDDMINKF 373
T+H L +V L ++ + + Y Y EF++ W DM+N F
Sbjct: 358 ATKHALCIWMVVGKFPSWFNAGLGERYNDWKAEFYR---LYHLESVEEFELGWRDMVNSF 414
Query: 374 SLGDHLWLKKLYSLRDKWCLVFNSDTFSANIDSVQRSDSIDTVFHQVSTKRMDVISFVQH 433
L + + LY+ R W L + F A + RS +I+ + + + + FV+
Sbjct: 415 GLHTNRHINNLYASRSLWSLPYLRSHFLAGMTLTGRSKAINAFIQRFLSAQTRLAHFVEQ 474
Query: 434 FEEKTKEMHLDELEDDHFCKHVVPRLQVWNG--ILNHAVYVYTSKIFNFFEMELLGCMGV 491
D+ + + + + + G + +HA V T F+ + +L+
Sbjct: 475 VAVVVD--FKDQATEQQTMQQNLQNISLKTGAPMESHAASVLTPFAFSKLQEQLVLAAHY 532
Query: 492 RMKEVCKDGEVCIYEAIEEGQQKVCKINYNLSTQDI-SCSCKLFERMGILCRHALKAFDF 550
++ +G + + +G +KV Y + + I SCSC+LFE G LCRHAL+
Sbjct: 533 ASFQM-DEGYLVRHHTKLDGGRKV----YWVPQEGIISCSCQLFEFSGFLCRHALRVLST 587
Query: 551 NNLTQIPVQYILKRWTKEAKK-GIVVRVSNERHGLSSNTVKSVQSLRLSE 599
N Q+P +Y+ RW + + R + E HG ++++ S +SE
Sbjct: 588 GNCFQVPDRYLPLRWRRISTSFSKTFRSNAEDHGERVQLLQNLVSTLVSE 637
>TAIR|locus:2097543 [details] [associations]
symbol:AT3G59470 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101
EMBL:CP002686 EMBL:AY058089 EMBL:AY143081 IPI:IPI00519802
RefSeq:NP_001190136.1 RefSeq:NP_567085.1 UniGene:At.26657
IntAct:Q93Z68 PaxDb:Q93Z68 PRIDE:Q93Z68 EnsemblPlants:AT3G59470.1
EnsemblPlants:AT3G59470.2 GeneID:825116 KEGG:ath:AT3G59470
TAIR:At3g59470 eggNOG:NOG330011 InParanoid:Q93Z68 OMA:VENHNEM
PhylomeDB:Q93Z68 ProtClustDB:CLSN2689239 Genevestigator:Q93Z68
Uniprot:Q93Z68
Length = 251
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 39/100 (39%), Positives = 52/100 (52%)
Query: 22 VGTEVKSDAEAYNLCNNYAFRKGFSLRKGHVRRDA-SGNIRQRDFVCSKEGFPVDEDLCA 80
VG E +S+A A+ N YA + GF +R + R G+ R VC+KEG+ +
Sbjct: 72 VGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPSKRDK 131
Query: 81 VKRCNRLETRTGCKVLMRFTVSN-GVWVISHINFEHNHEL 119
V R R ETR GCK ++ N G WVI+ EHNH L
Sbjct: 132 VIR-QRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSL 170
>TAIR|locus:2079651 [details] [associations]
symbol:AT3G07500 "AT3G07500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002686
GenomeReviews:BA000014_GR HOGENOM:HOG000090425 EMBL:BT004031
EMBL:BT005083 IPI:IPI00525865 RefSeq:NP_187406.2 UniGene:At.48631
UniGene:At.71201 IntAct:Q84JA7 PRIDE:Q84JA7
EnsemblPlants:AT3G07500.1 GeneID:819938 KEGG:ath:AT3G07500
TAIR:At3g07500 eggNOG:NOG320386 InParanoid:Q84JA7 OMA:ERRRCTA
PhylomeDB:Q84JA7 ProtClustDB:CLSN2690766 Genevestigator:Q84JA7
Uniprot:Q84JA7
Length = 217
Score = 141 (54.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 39/121 (32%), Positives = 57/121 (47%)
Query: 1 MDHSNSGKEALEGIGNDGELKVGTEVKSDAEAYNLCNNYAFRKGFSLRKGHVRRDA-SGN 59
M++S+ K + E +G E +S+ A + +NYA GF +R RR G
Sbjct: 14 MENSDVMKTVTDEASPMVEPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGT 73
Query: 60 IRQRDFVCSKEGFPVDEDLCAVKRCNRLETRTGCKVLMRFT-VSNGVWVISHINFEHNHE 118
+ R VC+KEGF + R R TR GCK L+ +G W+++ EHNH
Sbjct: 74 VVWRRLVCNKEGFRRSRPRRSESRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHP 133
Query: 119 L 119
L
Sbjct: 134 L 134
>TAIR|locus:2041041 [details] [associations]
symbol:AT2G43280 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] [GO:0006301 "postreplication repair"
evidence=RCA] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002685
EMBL:BT002891 EMBL:BT004409 IPI:IPI00532233 RefSeq:NP_181857.2
UniGene:At.36909 EnsemblPlants:AT2G43280.1 GeneID:818930
KEGG:ath:AT2G43280 TAIR:At2g43280 HOGENOM:HOG000090425
InParanoid:Q84J94 OMA:PREARHT PhylomeDB:Q84J94
ProtClustDB:CLSN2680222 Genevestigator:Q84J94 Uniprot:Q84J94
Length = 206
Score = 121 (47.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 38/110 (34%), Positives = 51/110 (46%)
Query: 19 ELKVGTEVKSDAEAYNLCNNYAFRKGFSLRKGHVRR-DASGNIRQRDFVCSKEGFPVD-E 76
E + G +S+ A ++Y+ R GF +R RR + G I R F C+KEG V
Sbjct: 21 EPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIR 80
Query: 77 DLCAVKRCNRLETRTGCKVLMRFTVS-NGVWVISHINFEHNHELA-KPEE 124
R R TR GCK ++ +G WVI+ EHNH L P E
Sbjct: 81 GKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPRE 130
>TAIR|locus:2135738 [details] [associations]
symbol:AT4G12850 "AT4G12850" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002687
EMBL:AL049640 EMBL:AL161535 HOGENOM:HOG000090425 IPI:IPI00545761
PIR:T06643 RefSeq:NP_193021.1 UniGene:At.33440 DNASU:826897
EnsemblPlants:AT4G12850.1 GeneID:826897 KEGG:ath:AT4G12850
TAIR:At4g12850 InParanoid:Q9SU01 OMA:EEIECQD PhylomeDB:Q9SU01
ProtClustDB:CLSN2916026 ArrayExpress:Q9SU01 Genevestigator:Q9SU01
Uniprot:Q9SU01
Length = 183
Score = 110 (43.8 bits), Expect = 0.00081, P = 0.00081
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 22 VGTEVKSDAEAYNLCNNYAFRKGFSLRKGHVRRDA-SGNIRQRDFVCSKEGFPVDEDLCA 80
VG + +S+ EA + Y+ R GF +R RR G R C+K+GF + +
Sbjct: 12 VGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFGPNNQRSS 71
Query: 81 VKRCNRLETRTGCK--VLMRFTVSNGVWVISHINFEHNHEL 119
+ +R GCK +L++ S G WV++ EHNH L
Sbjct: 72 SSSSS---SREGCKATILVKMEKS-GKWVVTRFIKEHNHSL 108
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 669 653 0.00096 120 3 11 22 0.49 33
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 623 (66 KB)
Total size of DFA: 392 KB (2191 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 57.14u 0.09s 57.23t Elapsed: 00:00:02
Total cpu time: 57.14u 0.09s 57.23t Elapsed: 00:00:02
Start: Fri May 10 20:23:23 2013 End: Fri May 10 20:23:25 2013