Query 005931
Match_columns 669
No_of_seqs 530 out of 3375
Neff 9.1
Searched_HMMs 46136
Date Thu Mar 28 15:52:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005931.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005931hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PHA02874 ankyrin repeat protei 100.0 1.8E-39 3.8E-44 354.1 35.8 299 5-325 1-300 (434)
2 KOG0510 Ankyrin repeat protein 100.0 8.3E-39 1.8E-43 339.5 38.8 305 6-319 89-416 (929)
3 PHA02876 ankyrin repeat protei 100.0 1.4E-39 2.9E-44 374.5 35.1 330 5-346 42-472 (682)
4 PHA02946 ankyin-like protein; 100.0 1.9E-39 4E-44 351.3 33.6 301 14-333 48-375 (446)
5 PHA02876 ankyrin repeat protei 100.0 1.4E-37 3E-42 357.9 37.9 320 7-342 147-499 (682)
6 PHA02946 ankyin-like protein; 100.0 2.7E-37 5.8E-42 334.5 33.0 309 8-342 12-348 (446)
7 KOG0510 Ankyrin repeat protein 100.0 5.3E-38 1.1E-42 333.5 25.1 303 31-342 79-402 (929)
8 PHA02716 CPXV016; CPX019; EVM0 100.0 3.3E-37 7.2E-42 343.0 32.5 318 14-341 151-564 (764)
9 PHA03095 ankyrin-like protein; 100.0 1.2E-36 2.6E-41 336.4 30.5 295 5-310 11-320 (471)
10 PHA02878 ankyrin repeat protei 100.0 6.3E-36 1.4E-40 329.9 32.8 302 8-324 3-311 (477)
11 PHA03100 ankyrin repeat protei 100.0 7.2E-36 1.6E-40 330.9 28.1 287 13-310 10-313 (480)
12 PHA03095 ankyrin-like protein; 100.0 2.1E-35 4.6E-40 326.4 31.3 280 45-333 19-310 (471)
13 PHA02716 CPXV016; CPX019; EVM0 100.0 3.5E-34 7.6E-39 318.9 32.0 305 4-327 177-581 (764)
14 PHA02874 ankyrin repeat protei 100.0 7.2E-34 1.6E-38 310.0 33.9 297 4-324 35-334 (434)
15 PHA03100 ankyrin repeat protei 100.0 3.6E-34 7.9E-39 317.3 29.2 278 51-341 13-307 (480)
16 PHA02730 ankyrin-like protein; 100.0 1.1E-32 2.3E-37 301.2 32.7 329 4-343 41-488 (672)
17 PHA02917 ankyrin-like protein; 100.0 1.1E-32 2.4E-37 309.4 33.6 324 4-340 32-509 (661)
18 PHA02989 ankyrin repeat protei 100.0 8.3E-33 1.8E-37 306.1 32.0 281 9-300 4-310 (494)
19 PHA02989 ankyrin repeat protei 100.0 1.5E-32 3.2E-37 304.1 29.8 274 50-333 13-309 (494)
20 PHA02878 ankyrin repeat protei 100.0 1.6E-32 3.5E-37 302.8 28.6 296 5-317 38-343 (477)
21 PHA02875 ankyrin repeat protei 100.0 2.7E-32 5.9E-37 296.1 29.6 243 41-324 3-249 (413)
22 KOG0508 Ankyrin repeat protein 100.0 8E-33 1.7E-37 277.2 21.6 217 9-230 8-235 (615)
23 PHA02917 ankyrin-like protein; 100.0 9.3E-32 2E-36 302.0 31.8 206 18-231 12-252 (661)
24 PHA02791 ankyrin-like protein; 100.0 7.5E-32 1.6E-36 272.3 26.8 214 51-277 10-225 (284)
25 PHA02875 ankyrin repeat protei 100.0 1.1E-31 2.3E-36 291.4 29.8 219 7-230 4-222 (413)
26 KOG4177 Ankyrin [Cell wall/mem 100.0 1.5E-32 3.2E-37 310.6 23.0 318 9-334 213-627 (1143)
27 PHA02791 ankyrin-like protein; 100.0 9.4E-32 2E-36 271.6 26.1 222 84-319 9-232 (284)
28 PHA02730 ankyrin-like protein; 100.0 2.9E-31 6.3E-36 290.0 31.7 327 4-341 77-522 (672)
29 PHA02798 ankyrin-like protein; 100.0 4.2E-31 9.1E-36 292.1 29.5 290 9-311 6-322 (489)
30 KOG4177 Ankyrin [Cell wall/mem 100.0 3.3E-32 7.3E-37 307.7 18.8 331 9-350 180-606 (1143)
31 KOG4412 26S proteasome regulat 100.0 1.4E-31 3.1E-36 236.4 15.2 200 10-215 8-209 (226)
32 KOG4412 26S proteasome regulat 100.0 1.8E-31 3.9E-36 235.8 15.5 206 110-321 5-212 (226)
33 PHA02798 ankyrin-like protein; 100.0 4.2E-30 9E-35 284.2 27.0 269 52-331 17-309 (489)
34 KOG0509 Ankyrin repeat and DHH 100.0 6.1E-29 1.3E-33 260.7 17.5 208 110-323 46-255 (600)
35 PHA02792 ankyrin-like protein; 100.0 1.6E-27 3.5E-32 257.9 28.2 279 35-322 66-452 (631)
36 PF13962 PGG: Domain of unknow 100.0 1.2E-28 2.6E-33 214.2 11.1 112 464-575 1-113 (113)
37 KOG0509 Ankyrin repeat and DHH 100.0 1.2E-27 2.6E-32 251.0 17.7 210 41-254 45-255 (600)
38 KOG0508 Ankyrin repeat protein 100.0 7.7E-27 1.7E-31 234.4 20.8 81 239-322 477-570 (615)
39 PHA02792 ankyrin-like protein; 100.0 1.5E-26 3.3E-31 250.3 24.8 286 5-299 72-473 (631)
40 PHA02859 ankyrin repeat protei 99.9 2.6E-24 5.6E-29 209.8 20.3 176 141-324 20-203 (209)
41 PHA02859 ankyrin repeat protei 99.9 8.1E-24 1.8E-28 206.3 20.1 178 37-221 18-203 (209)
42 KOG4369 RTK signaling protein 99.9 1.1E-24 2.3E-29 236.3 9.7 292 37-332 754-1046(2131)
43 KOG4369 RTK signaling protein 99.9 1.5E-24 3.3E-29 235.1 8.5 321 5-333 757-1080(2131)
44 PHA02795 ankyrin-like protein; 99.9 1.3E-22 2.8E-27 212.5 20.3 170 46-221 83-265 (437)
45 KOG0507 CASK-interacting adapt 99.9 4.3E-23 9.2E-28 218.9 15.8 256 4-265 2-278 (854)
46 TIGR00870 trp transient-recept 99.9 9.4E-21 2E-25 220.2 36.9 252 7-288 19-299 (743)
47 PHA02795 ankyrin-like protein; 99.9 2.3E-22 5E-27 210.7 20.5 199 56-266 65-284 (437)
48 KOG0502 Integral membrane anky 99.9 1.9E-23 4.1E-28 190.5 9.8 264 42-318 33-296 (296)
49 KOG0507 CASK-interacting adapt 99.9 1.6E-22 3.5E-27 214.5 15.4 249 42-324 5-265 (854)
50 TIGR00870 trp transient-recept 99.9 2.9E-22 6.2E-27 232.8 18.7 253 38-320 15-297 (743)
51 KOG0502 Integral membrane anky 99.9 9.2E-23 2E-27 186.0 9.6 263 8-284 34-296 (296)
52 PLN03192 Voltage-dependent pot 99.9 2E-20 4.4E-25 218.6 23.0 175 141-323 524-699 (823)
53 PLN03192 Voltage-dependent pot 99.9 1.6E-20 3.5E-25 219.5 21.8 173 38-217 523-696 (823)
54 KOG0514 Ankyrin repeat protein 99.8 1.6E-20 3.5E-25 183.6 12.8 166 169-338 261-432 (452)
55 KOG0505 Myosin phosphatase, re 99.8 9.1E-20 2E-24 187.9 12.9 229 7-254 42-274 (527)
56 KOG0505 Myosin phosphatase, re 99.8 2E-19 4.3E-24 185.4 13.0 232 43-324 43-275 (527)
57 KOG0514 Ankyrin repeat protein 99.8 2.9E-19 6.3E-24 174.9 11.3 196 41-267 222-430 (452)
58 KOG0512 Fetal globin-inducing 99.8 6E-18 1.3E-22 149.2 12.9 146 178-326 65-211 (228)
59 KOG0512 Fetal globin-inducing 99.8 6.6E-18 1.4E-22 148.9 13.1 141 44-186 67-208 (228)
60 PHA02743 Viral ankyrin protein 99.8 9.4E-18 2E-22 157.4 14.3 142 171-315 15-163 (166)
61 PHA02741 hypothetical protein; 99.8 1.5E-17 3.3E-22 156.7 14.9 124 207-332 18-151 (169)
62 PHA02741 hypothetical protein; 99.7 3E-17 6.4E-22 154.8 15.6 132 32-165 13-155 (169)
63 PHA02884 ankyrin repeat protei 99.7 3.6E-17 7.9E-22 165.4 16.4 157 33-200 25-186 (300)
64 PHA02743 Viral ankyrin protein 99.7 1.2E-16 2.5E-21 150.1 14.8 138 139-280 17-162 (166)
65 PHA02884 ankyrin repeat protei 99.7 6.4E-16 1.4E-20 156.4 17.3 85 175-260 69-153 (300)
66 PHA02736 Viral ankyrin protein 99.7 1.6E-16 3.4E-21 147.6 11.5 132 31-165 8-149 (154)
67 PHA02736 Viral ankyrin protein 99.7 2.3E-16 5E-21 146.5 11.3 135 67-203 10-153 (154)
68 KOG3676 Ca2+-permeable cation 99.7 1.2E-15 2.7E-20 165.0 15.7 212 7-232 103-330 (782)
69 KOG3676 Ca2+-permeable cation 99.7 5.7E-14 1.2E-18 152.2 28.2 212 108-335 101-330 (782)
70 KOG0195 Integrin-linked kinase 99.6 6.8E-16 1.5E-20 146.6 7.9 128 207-342 31-158 (448)
71 KOG0195 Integrin-linked kinase 99.6 6.1E-16 1.3E-20 147.0 5.6 138 9-150 4-141 (448)
72 PF12796 Ank_2: Ankyrin repeat 99.5 6.5E-14 1.4E-18 116.9 10.9 89 214-310 1-89 (89)
73 cd00204 ANK ankyrin repeats; 99.5 1.8E-13 3.9E-18 121.4 14.3 123 36-161 3-125 (126)
74 cd00204 ANK ankyrin repeats; 99.5 2.7E-13 5.9E-18 120.3 14.8 124 172-299 3-126 (126)
75 PF12796 Ank_2: Ankyrin repeat 99.5 8.4E-14 1.8E-18 116.3 10.3 85 44-134 1-85 (89)
76 KOG4214 Myotrophin and similar 99.4 1.7E-12 3.6E-17 102.8 9.2 106 212-322 4-109 (117)
77 KOG1710 MYND Zn-finger and ank 99.4 3.1E-12 6.6E-17 122.1 11.6 122 6-130 13-134 (396)
78 KOG4214 Myotrophin and similar 99.4 3.5E-12 7.5E-17 101.0 8.5 103 7-114 4-106 (117)
79 COG0666 Arp FOG: Ankyrin repea 99.3 3.9E-11 8.4E-16 118.4 17.4 129 170-301 67-202 (235)
80 KOG0515 p53-interacting protei 99.3 5.2E-12 1.1E-16 129.5 9.5 117 9-128 554-672 (752)
81 COG0666 Arp FOG: Ankyrin repea 99.3 1.2E-10 2.7E-15 114.7 16.6 131 68-232 67-202 (235)
82 PF13637 Ank_4: Ankyrin repeat 99.2 1.7E-11 3.8E-16 91.5 6.7 54 40-94 1-54 (54)
83 PF13857 Ank_5: Ankyrin repeat 99.2 8.6E-12 1.9E-16 93.7 4.3 51 269-320 6-56 (56)
84 PF13637 Ank_4: Ankyrin repeat 99.2 8E-11 1.7E-15 87.8 6.7 54 244-299 1-54 (54)
85 KOG0515 p53-interacting protei 99.1 1.5E-10 3.2E-15 119.1 9.7 120 42-163 552-673 (752)
86 PF13857 Ank_5: Ankyrin repeat 99.1 1.2E-10 2.6E-15 87.4 4.5 56 229-286 1-56 (56)
87 KOG1710 MYND Zn-finger and ank 99.1 8.8E-10 1.9E-14 105.5 10.8 121 143-265 13-133 (396)
88 PTZ00322 6-phosphofructo-2-kin 99.1 8.4E-10 1.8E-14 125.8 12.8 87 42-130 84-170 (664)
89 PTZ00322 6-phosphofructo-2-kin 99.0 8.2E-10 1.8E-14 125.9 11.9 106 179-286 85-195 (664)
90 KOG0782 Predicted diacylglycer 98.9 5.5E-09 1.2E-13 108.2 9.9 126 3-131 864-990 (1004)
91 KOG0506 Glutaminase (contains 98.5 1.2E-07 2.5E-12 97.0 4.7 94 37-131 503-596 (622)
92 KOG0782 Predicted diacylglycer 98.4 5.6E-07 1.2E-11 93.7 8.4 118 214-333 870-987 (1004)
93 KOG0783 Uncharacterized conser 98.4 1.4E-07 3.1E-12 102.3 3.9 89 231-322 39-128 (1267)
94 KOG0783 Uncharacterized conser 98.4 3.8E-07 8.2E-12 99.1 5.6 105 13-118 25-129 (1267)
95 KOG0522 Ankyrin repeat protein 98.4 8.8E-07 1.9E-11 92.5 7.5 92 7-99 22-113 (560)
96 KOG0818 GTPase-activating prot 98.3 1.6E-06 3.4E-11 89.3 9.1 85 248-335 137-222 (669)
97 KOG0506 Glutaminase (contains 98.3 6.1E-07 1.3E-11 91.9 5.9 94 242-337 504-597 (622)
98 PF13606 Ank_3: Ankyrin repeat 98.3 5.9E-07 1.3E-11 57.5 3.6 30 278-308 1-30 (30)
99 PF00023 Ank: Ankyrin repeat H 98.3 6.9E-07 1.5E-11 58.8 3.9 33 278-311 1-33 (33)
100 PF13606 Ank_3: Ankyrin repeat 98.3 7.5E-07 1.6E-11 57.0 3.6 27 74-100 2-28 (30)
101 KOG0818 GTPase-activating prot 98.2 3.8E-06 8.2E-11 86.6 8.6 89 42-131 135-223 (669)
102 KOG0705 GTPase-activating prot 98.2 5.1E-06 1.1E-10 87.2 8.3 92 6-98 625-718 (749)
103 KOG0522 Ankyrin repeat protein 98.2 4.7E-06 1E-10 87.2 7.7 88 212-301 22-110 (560)
104 PF00023 Ank: Ankyrin repeat H 98.1 5.7E-06 1.2E-10 54.4 4.2 28 74-101 2-29 (33)
105 KOG3609 Receptor-activated Ca2 98.0 2.3E-05 4.9E-10 86.9 9.1 119 9-135 29-158 (822)
106 KOG3609 Receptor-activated Ca2 97.8 5.3E-05 1.2E-09 84.0 9.1 122 40-169 25-158 (822)
107 KOG0521 Putative GTPase activa 97.8 3.4E-05 7.5E-10 88.0 6.4 91 241-335 653-743 (785)
108 KOG0705 GTPase-activating prot 97.6 0.00013 2.9E-09 76.9 7.9 91 43-134 627-720 (749)
109 KOG0511 Ankyrin repeat protein 97.5 0.00023 5.1E-09 71.4 7.7 55 78-133 40-94 (516)
110 KOG0520 Uncharacterized conser 97.5 8.9E-05 1.9E-09 84.1 5.4 127 207-335 571-702 (975)
111 KOG0520 Uncharacterized conser 97.4 0.00018 3.9E-09 81.7 6.0 129 170-300 568-701 (975)
112 KOG2384 Major histocompatibili 97.4 0.00028 6E-09 64.5 6.1 65 67-131 5-69 (223)
113 KOG0511 Ankyrin repeat protein 97.4 0.00025 5.5E-09 71.2 6.1 73 42-116 38-110 (516)
114 KOG2384 Major histocompatibili 97.4 0.0004 8.8E-09 63.5 6.4 70 31-100 3-72 (223)
115 KOG0521 Putative GTPase activa 97.3 0.00024 5.2E-09 81.2 4.8 80 40-121 656-735 (785)
116 smart00248 ANK ankyrin repeats 95.6 0.019 4E-07 35.1 3.7 25 74-98 2-26 (30)
117 KOG2505 Ankyrin repeat protein 95.4 0.025 5.3E-07 59.5 5.7 66 255-321 402-471 (591)
118 PF03158 DUF249: Multigene fam 95.3 0.17 3.7E-06 46.7 9.9 136 77-230 49-190 (192)
119 smart00248 ANK ankyrin repeats 94.7 0.047 1E-06 33.1 3.5 26 176-201 2-27 (30)
120 PF03158 DUF249: Multigene fam 94.3 0.36 7.9E-06 44.6 9.5 141 40-197 46-191 (192)
121 KOG2505 Ankyrin repeat protein 93.6 0.093 2E-06 55.3 4.9 63 53-116 404-471 (591)
122 PF06128 Shigella_OspC: Shigel 92.4 1 2.2E-05 43.0 9.3 46 9-63 157-202 (284)
123 cd07920 Pumilio Pumilio-family 89.1 11 0.00025 39.0 15.0 93 207-299 198-299 (322)
124 cd07920 Pumilio Pumilio-family 88.1 9.2 0.0002 39.7 13.5 270 35-336 16-302 (322)
125 PF11929 DUF3447: Domain of un 86.3 1.1 2.5E-05 35.5 4.1 46 77-130 9-54 (76)
126 TIGR01569 A_tha_TIGR01569 plan 85.9 11 0.00025 34.5 11.0 33 505-537 35-67 (154)
127 PF14126 DUF4293: Domain of un 85.7 28 0.0006 31.7 13.6 33 522-554 55-87 (149)
128 PF11929 DUF3447: Domain of un 85.2 1.7 3.6E-05 34.6 4.6 48 41-96 7-54 (76)
129 KOG4193 G protein-coupled rece 84.5 23 0.0005 40.2 14.7 67 557-627 518-585 (610)
130 PF06128 Shigella_OspC: Shigel 83.2 6.4 0.00014 37.8 8.1 116 78-201 157-279 (284)
131 COG2322 Predicted membrane pro 82.8 38 0.00083 30.9 12.7 24 471-494 11-34 (177)
132 KOG4016 Synaptic vesicle prote 79.8 45 0.00098 31.7 12.2 98 476-580 30-137 (233)
133 KOG3817 Uncharacterized conser 73.7 29 0.00064 35.6 10.0 25 516-540 161-187 (452)
134 COG4298 Uncharacterized protei 70.0 11 0.00023 30.0 4.7 47 515-574 14-60 (95)
135 PF15099 PIRT: Phosphoinositid 68.9 4.2 9E-05 35.1 2.5 24 599-622 92-115 (129)
136 PF07214 DUF1418: Protein of u 65.7 33 0.00073 28.3 6.9 55 557-611 15-70 (96)
137 PLN03077 Protein ECB2; Provisi 65.5 2.7E+02 0.0059 33.4 18.1 189 144-348 529-729 (857)
138 KOG2417 Predicted G-protein co 65.3 39 0.00084 34.8 8.8 64 511-574 38-101 (462)
139 PLN03081 pentatricopeptide (PP 62.1 3.1E+02 0.0067 32.0 20.2 276 41-342 263-560 (697)
140 PF14851 FAM176: FAM176 family 59.6 32 0.00069 31.3 6.5 24 592-615 26-49 (153)
141 PF03188 Cytochrom_B561: Eukar 59.6 68 0.0015 28.4 8.9 21 556-576 41-61 (137)
142 PTZ00370 STEVOR; Provisional 59.0 34 0.00074 34.3 7.1 19 472-490 177-195 (296)
143 PF04535 DUF588: Domain of unk 57.5 44 0.00095 30.3 7.3 34 504-537 39-72 (149)
144 PRK10591 hypothetical protein; 56.5 51 0.0011 26.9 6.4 55 557-611 15-70 (92)
145 TIGR00383 corA magnesium Mg(2+ 55.9 29 0.00063 36.0 6.6 19 556-574 261-279 (318)
146 COG1294 AppB Cytochrome bd-typ 55.3 1.4E+02 0.003 31.3 11.2 31 465-495 198-228 (346)
147 PF07086 DUF1352: Protein of u 55.0 1.5E+02 0.0032 28.1 10.3 19 602-620 166-184 (186)
148 PF05399 EVI2A: Ectropic viral 54.4 41 0.00088 32.0 6.4 35 614-648 162-197 (227)
149 PRK12438 hypothetical protein; 54.3 2.5E+02 0.0054 33.8 14.1 15 503-517 149-163 (991)
150 COG2194 Predicted membrane-ass 53.8 65 0.0014 36.2 9.1 13 561-573 79-91 (555)
151 PF03699 UPF0182: Uncharacteri 52.8 3.5E+02 0.0076 31.8 14.9 46 469-517 100-153 (774)
152 PF05313 Pox_P21: Poxvirus P21 52.6 1.2E+02 0.0026 28.2 8.9 32 548-579 82-113 (189)
153 PF12273 RCR: Chitin synthesis 52.3 15 0.00033 32.5 3.3 6 584-589 2-7 (130)
154 PF06011 TRP: Transient recept 51.9 69 0.0015 35.0 9.0 88 527-618 333-420 (438)
155 PF15086 UPF0542: Uncharacteri 51.4 30 0.00064 26.8 4.1 39 584-622 20-58 (74)
156 PLN03218 maturation of RBCL 1; 51.3 1.1E+02 0.0023 37.6 11.1 188 144-340 584-784 (1060)
157 PRK00068 hypothetical protein; 50.3 4.4E+02 0.0096 31.8 15.3 15 503-517 147-161 (970)
158 TIGR02921 PEP_integral PEP-CTE 50.3 3.9E+02 0.0085 29.9 13.7 26 472-499 107-132 (952)
159 PRK02509 hypothetical protein; 49.7 2.1E+02 0.0046 34.2 12.5 15 503-517 221-235 (973)
160 PRK10263 DNA translocase FtsK; 48.3 2.3E+02 0.005 35.2 12.9 23 466-488 21-46 (1355)
161 KOG4026 Uncharacterized conser 47.9 2.2E+02 0.0049 27.1 10.1 27 472-498 10-36 (207)
162 PF10966 DUF2768: Protein of u 47.9 17 0.00037 26.9 2.3 20 557-576 2-21 (58)
163 COG0598 CorA Mg2+ and Co2+ tra 47.5 1.1E+02 0.0024 31.9 9.3 19 556-574 265-283 (322)
164 PF04053 Coatomer_WDAD: Coatom 46.7 41 0.00089 36.7 6.1 73 10-95 269-342 (443)
165 PRK00733 hppA membrane-bound p 45.4 67 0.0015 36.4 7.5 14 475-488 211-224 (666)
166 PF04238 DUF420: Protein of un 45.1 2.2E+02 0.0049 25.3 10.8 29 599-627 86-114 (133)
167 KOG3030 Lipid phosphate phosph 44.9 1.7E+02 0.0036 30.4 9.8 50 560-615 218-267 (317)
168 PF10066 DUF2304: Uncharacteri 43.2 1.9E+02 0.0041 24.9 8.6 8 523-530 7-14 (115)
169 PF05297 Herpes_LMP1: Herpesvi 42.7 8.2 0.00018 38.2 0.0 14 579-592 131-144 (381)
170 PRK10747 putative protoheme IX 41.8 54 0.0012 35.3 6.2 9 564-572 19-27 (398)
171 COG1862 YajC Preprotein transl 41.3 47 0.001 27.7 4.2 13 624-636 45-57 (97)
172 PRK09546 zntB zinc transporter 40.8 87 0.0019 32.6 7.4 19 556-574 267-285 (324)
173 PF03669 UPF0139: Uncharacteri 40.7 1.4E+02 0.003 25.3 7.1 37 519-572 34-70 (103)
174 PF04053 Coatomer_WDAD: Coatom 40.2 59 0.0013 35.5 6.1 161 44-233 268-428 (443)
175 PLN03218 maturation of RBCL 1; 39.9 2.7E+02 0.0059 34.3 12.1 193 144-340 547-749 (1060)
176 PF10754 DUF2569: Protein of u 39.9 1.9E+02 0.0041 26.2 8.5 55 514-571 52-106 (149)
177 KOG4591 Uncharacterized conser 39.8 20 0.00044 33.6 2.1 48 241-288 219-269 (280)
178 PTZ00234 variable surface prot 39.8 18 0.0004 39.0 2.1 18 649-666 416-433 (433)
179 PF06695 Sm_multidrug_ex: Puta 39.7 80 0.0017 27.6 5.7 35 584-618 16-50 (121)
180 PRK11085 magnesium/nickel/coba 39.5 2.6E+02 0.0057 29.0 10.4 19 556-574 259-277 (316)
181 PF01544 CorA: CorA-like Mg2+ 38.9 49 0.0011 33.5 5.1 20 556-575 237-256 (292)
182 KOG0292 Vesicle coat complex C 38.7 2.1E+02 0.0045 33.6 9.9 193 42-268 548-780 (1202)
183 PF12805 FUSC-like: FUSC-like 37.2 2.7E+02 0.0058 28.3 10.2 15 583-597 70-84 (284)
184 PF10011 DUF2254: Predicted me 37.1 2.1E+02 0.0046 30.4 9.7 21 473-493 11-31 (371)
185 PF11457 DUF3021: Protein of u 36.5 3E+02 0.0065 24.2 9.7 23 599-621 110-132 (136)
186 PF12271 Chs3p: Chitin synthas 36.1 3.8E+02 0.0082 27.3 10.5 37 579-616 182-218 (293)
187 PLN00148 potassium transporter 36.1 1.5E+02 0.0032 34.7 8.4 19 470-488 396-414 (785)
188 PF06687 SUR7: SUR7/PalI famil 35.9 1.4E+02 0.0029 28.7 7.5 18 556-573 156-173 (212)
189 PF05915 DUF872: Eukaryotic pr 35.8 2.4E+02 0.0052 24.4 7.9 25 547-571 41-65 (115)
190 TIGR00540 hemY_coli hemY prote 35.5 96 0.0021 33.5 6.9 13 563-575 18-30 (409)
191 PF04971 Lysis_S: Lysis protei 35.1 90 0.0019 24.0 4.5 9 580-588 29-37 (68)
192 PF14163 SieB: Superinfection 34.4 1.7E+02 0.0037 26.5 7.4 15 560-574 11-25 (151)
193 PF09835 DUF2062: Uncharacteri 34.1 3.6E+02 0.0077 24.4 10.8 33 590-622 120-152 (154)
194 TIGR00947 2A73 probable bicarb 34.0 3.9E+02 0.0085 29.0 11.3 25 512-536 163-187 (425)
195 TIGR02184 Myco_arth_vir_N Myco 33.6 25 0.00054 22.6 1.1 22 469-490 9-30 (33)
196 PF12304 BCLP: Beta-casein lik 33.5 46 0.001 31.0 3.3 28 515-542 38-66 (188)
197 PF11241 DUF3043: Protein of u 33.4 3.2E+02 0.0069 25.4 8.7 18 552-569 77-94 (170)
198 PLN00150 potassium ion transpo 33.4 1.1E+02 0.0023 35.7 6.8 18 471-488 414-431 (779)
199 PF02009 Rifin_STEVOR: Rifin/s 33.4 81 0.0018 32.3 5.4 26 595-620 264-289 (299)
200 PLN00151 potassium transporter 33.0 1.5E+02 0.0033 34.7 8.0 18 471-488 474-491 (852)
201 PLN00149 potassium transporter 32.8 1.3E+02 0.0029 34.9 7.5 17 471-487 401-417 (779)
202 PF11137 DUF2909: Protein of u 32.1 2.3E+02 0.005 21.6 6.9 21 559-579 7-27 (63)
203 PF12442 DUF3681: Protein of u 31.7 1.3E+02 0.0028 25.5 5.4 30 470-499 8-40 (104)
204 PTZ00370 STEVOR; Provisional 31.3 86 0.0019 31.5 5.0 13 561-573 242-254 (296)
205 PF03030 H_PPase: Inorganic H+ 30.3 2.4E+02 0.0052 32.5 8.9 74 518-593 260-335 (682)
206 MTH00033 CYTB cytochrome b; Pr 30.1 7.1E+02 0.015 26.6 13.9 53 467-521 223-279 (383)
207 PRK13453 F0F1 ATP synthase sub 30.0 1.3E+02 0.0027 28.2 5.8 37 583-619 17-53 (173)
208 COG1295 Rbn Ribonuclease BN fa 30.0 2.5E+02 0.0055 28.9 8.6 40 535-576 207-246 (303)
209 TIGR00794 kup potassium uptake 28.9 1.6E+02 0.0035 33.9 7.3 20 470-489 367-386 (688)
210 COG3610 Uncharacterized conser 28.8 27 0.00058 32.0 1.0 21 476-496 10-30 (156)
211 PF02705 K_trans: K+ potassium 28.3 1.9E+02 0.0042 32.2 7.6 18 470-487 330-347 (534)
212 PF09971 DUF2206: Predicted me 28.1 2E+02 0.0043 30.6 7.5 118 486-622 91-211 (367)
213 PF01578 Cytochrom_C_asm: Cyto 28.0 5.4E+02 0.012 24.6 10.2 22 588-609 77-98 (214)
214 PLN03077 Protein ECB2; Provisi 27.3 1.1E+03 0.024 28.1 17.5 108 11-130 231-348 (857)
215 COG3887 Predicted signaling pr 27.1 3E+02 0.0066 30.9 8.6 19 556-574 17-35 (655)
216 PRK07668 hypothetical protein; 27.0 6.2E+02 0.013 25.3 10.2 53 437-489 37-91 (254)
217 KOG0292 Vesicle coat complex C 26.8 2.7E+02 0.0058 32.8 8.3 214 77-338 549-781 (1202)
218 KOG3832 Predicted amino acid t 26.5 1.5E+02 0.0032 28.3 5.4 12 563-574 32-43 (319)
219 TIGR01478 STEVOR variant surfa 26.4 3.6E+02 0.0078 27.2 8.3 19 472-490 177-195 (295)
220 PF07051 OCIA: Ovarian carcino 26.4 2.3E+02 0.0051 24.2 6.0 25 557-581 47-71 (111)
221 PHA02849 putative transmembran 26.3 1.5E+02 0.0033 23.3 4.5 17 606-622 40-56 (82)
222 PF11137 DUF2909: Protein of u 26.1 3E+02 0.0065 21.0 6.2 56 517-572 4-59 (63)
223 KOG2927 Membrane component of 26.1 1.1E+02 0.0024 31.7 4.8 58 554-613 188-245 (372)
224 COG4818 Predicted membrane pro 26.1 3.6E+02 0.0078 22.3 6.7 29 512-540 28-56 (105)
225 PRK05585 yajC preprotein trans 26.1 1.6E+02 0.0034 25.1 5.1 12 624-635 54-65 (106)
226 PRK15204 undecaprenyl-phosphat 26.0 3.6E+02 0.0078 29.8 9.4 14 479-492 18-31 (476)
227 PF11151 DUF2929: Protein of u 26.0 2.8E+02 0.006 20.6 6.3 24 556-579 7-30 (57)
228 PF13829 DUF4191: Domain of un 25.9 1.9E+02 0.004 28.3 6.1 16 584-599 52-67 (224)
229 COG1300 SpoIIM Uncharacterized 25.8 6E+02 0.013 24.5 9.7 23 603-625 149-171 (207)
230 TIGR03025 EPS_sugtrans exopoly 25.6 3E+02 0.0065 30.0 8.7 16 599-614 100-115 (445)
231 TIGR01478 STEVOR variant surfa 25.6 84 0.0018 31.5 3.8 15 560-574 245-259 (295)
232 COG5522 Predicted integral mem 25.6 3.6E+02 0.0077 25.9 7.6 85 483-581 105-189 (236)
233 PF01529 zf-DHHC: DHHC palmito 25.4 3.4E+02 0.0075 24.8 8.0 7 504-510 83-89 (174)
234 PF01566 Nramp: Natural resist 25.2 5.6E+02 0.012 26.9 10.5 17 472-488 57-73 (358)
235 PF03904 DUF334: Domain of unk 25.2 3.3E+02 0.0072 26.5 7.5 18 599-616 210-227 (230)
236 PF05656 DUF805: Protein of un 25.0 4.2E+02 0.009 22.6 7.9 18 511-528 11-28 (120)
237 PF01528 Herpes_glycop: Herpes 24.9 6.8E+02 0.015 26.6 10.6 24 467-490 207-230 (374)
238 PRK10714 undecaprenyl phosphat 24.3 4E+02 0.0086 27.7 9.0 9 545-553 230-238 (325)
239 PF05297 Herpes_LMP1: Herpesvi 24.3 25 0.00055 34.9 0.0 8 538-545 69-76 (381)
240 PF09788 Tmemb_55A: Transmembr 24.2 2.3E+02 0.0051 28.0 6.5 29 543-571 195-223 (256)
241 TIGR01477 RIFIN variant surfac 24.0 1.2E+02 0.0027 31.6 4.8 27 595-621 318-344 (353)
242 KOG3144 Ethanolamine-P-transfe 23.9 4.6E+02 0.01 24.5 7.8 97 504-604 85-188 (196)
243 COG4393 Predicted membrane pro 23.7 7.9E+02 0.017 25.5 10.1 50 525-581 8-57 (405)
244 PF10688 Imp-YgjV: Bacterial i 23.5 3.7E+02 0.0081 24.8 7.6 21 516-536 1-21 (163)
245 PF06570 DUF1129: Protein of u 23.4 2.8E+02 0.006 26.7 7.0 22 474-495 77-98 (206)
246 PTZ00046 rifin; Provisional 23.3 1.3E+02 0.0027 31.6 4.8 27 595-621 323-349 (358)
247 COG4956 Integral membrane prot 23.2 8.3E+02 0.018 25.2 10.1 153 470-629 1-164 (356)
248 PF07344 Amastin: Amastin surf 23.2 2.8E+02 0.0061 25.3 6.7 60 545-606 57-117 (155)
249 PF06687 SUR7: SUR7/PalI famil 23.2 6.1E+02 0.013 24.1 9.6 18 553-570 117-134 (212)
250 KOG3059 N-acetylglucosaminyltr 23.1 8E+02 0.017 24.9 10.6 24 522-545 174-197 (292)
251 PF04304 DUF454: Protein of un 23.0 1.2E+02 0.0027 23.3 3.7 19 559-577 31-49 (71)
252 PRK08633 2-acyl-glycerophospho 22.9 3.6E+02 0.0077 33.5 9.7 12 488-499 61-72 (1146)
253 PF13903 Claudin_2: PMP-22/EMP 22.9 5.6E+02 0.012 23.0 9.2 24 555-578 73-96 (172)
254 PF04246 RseC_MucC: Positive r 22.8 3.7E+02 0.008 23.7 7.3 13 600-612 105-117 (135)
255 PRK04214 rbn ribonuclease BN/u 22.8 4.8E+02 0.01 28.2 9.5 53 521-576 183-235 (412)
256 PF14362 DUF4407: Domain of un 22.8 2.9E+02 0.0063 28.3 7.5 14 602-615 95-108 (301)
257 PF03189 Otopetrin: Otopetrin; 22.7 2.8E+02 0.006 30.3 7.6 50 471-534 244-293 (441)
258 PF01988 VIT1: VIT family; In 22.7 6E+02 0.013 24.5 9.3 11 482-492 115-125 (213)
259 PRK10633 hypothetical protein; 22.7 4.1E+02 0.0088 21.3 7.3 22 596-617 52-73 (80)
260 PF15345 TMEM51: Transmembrane 22.7 1.2E+02 0.0025 29.6 4.0 12 598-609 68-79 (233)
261 CHL00045 ccsA cytochrome c bio 22.6 6.9E+02 0.015 25.9 10.2 18 469-486 39-56 (319)
262 MTH00119 CYTB cytochrome b; Pr 22.6 9.6E+02 0.021 25.6 13.4 53 467-520 227-280 (380)
263 PF15176 LRR19-TM: Leucine-ric 22.5 4.5E+02 0.0098 22.0 6.8 13 580-592 13-25 (102)
264 TIGR02840 spore_YtaF putative 22.5 7E+02 0.015 24.0 9.6 20 598-617 68-87 (206)
265 PF09610 Myco_arth_vir_N: Myco 22.4 54 0.0012 21.1 1.2 20 470-489 10-29 (33)
266 KOG3788 Predicted divalent cat 22.3 3.8E+02 0.0083 28.6 7.9 53 475-539 119-171 (441)
267 KOG2568 Predicted membrane pro 22.0 4.6E+02 0.0099 29.1 8.8 35 589-623 342-376 (518)
268 TIGR03144 cytochr_II_ccsB cyto 21.8 7E+02 0.015 24.6 9.7 13 590-602 100-112 (243)
269 PF06454 DUF1084: Protein of u 21.7 1.7E+02 0.0037 29.7 5.4 19 594-612 173-191 (281)
270 PF01708 Gemini_mov: Geminivir 21.5 61 0.0013 26.3 1.6 57 577-637 27-85 (91)
271 PRK05415 hypothetical protein; 21.5 7.4E+02 0.016 26.0 9.9 9 566-574 86-94 (341)
272 PF06570 DUF1129: Protein of u 21.3 7.3E+02 0.016 23.7 12.9 16 466-481 79-94 (206)
273 MTH00034 CYTB cytochrome b; Va 21.3 1E+03 0.022 25.4 13.0 54 468-522 227-281 (379)
274 PF09835 DUF2062: Uncharacteri 21.2 1.8E+02 0.004 26.3 5.1 31 591-621 124-154 (154)
275 TIGR00801 ncs2 uracil-xanthine 20.4 8.3E+02 0.018 26.4 10.7 12 525-536 18-29 (415)
276 PF11990 DUF3487: Protein of u 20.4 5.8E+02 0.013 22.3 8.3 25 615-639 88-114 (121)
277 PF04277 OAD_gamma: Oxaloaceta 20.3 2.1E+02 0.0046 22.5 4.7 9 604-612 24-32 (79)
278 PF03839 Sec62: Translocation 20.1 2.8E+02 0.0062 27.1 6.2 7 513-519 98-104 (224)
279 COG1971 Predicted membrane pro 20.1 7.6E+02 0.016 23.5 9.7 86 523-619 9-95 (190)
280 COG4280 Predicted membrane pro 20.0 7.3E+02 0.016 23.7 8.5 19 599-617 72-90 (236)
281 COG4325 Predicted membrane pro 20.0 1E+03 0.023 25.3 10.4 25 472-496 36-60 (464)
No 1
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=354.07 Aligned_cols=299 Identities=21% Similarity=0.276 Sum_probs=267.4
Q ss_pred cCHHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHc
Q 005931 5 MAQNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQ 84 (669)
Q Consensus 5 m~~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~ 84 (669)
|+..|+.|+..||++.++.+++ ..+..++..+..|.||||.|+..|+.++|++|++.|++ ++..+..|.||||.|+..
T Consensus 1 ~~~~l~~ai~~gd~~~v~~ll~-~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~-~n~~~~~~~t~L~~A~~~ 78 (434)
T PHA02874 1 ASQDLRMCIYSGDIEAIEKIIK-NKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGAD-INHINTKIPHPLLTAIKI 78 (434)
T ss_pred CcHHHHHHHhcCCHHHHHHHHH-cCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHc
Confidence 4567999999999999999998 55566777888999999999999999999999999998 788899999999999999
Q ss_pred CCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 005931 85 GNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEV 164 (669)
Q Consensus 85 g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ 164 (669)
|+.+++++|+++|++... .+....+.++++.|++.+.+.+ ..+..|.||||.|+..|+.+++++|++.
T Consensus 79 ~~~~iv~~Ll~~g~~~~~-----------~~~~~~~~~~i~~ll~~g~d~n-~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ 146 (434)
T PHA02874 79 GAHDIIKLLIDNGVDTSI-----------LPIPCIEKDMIKTILDCGIDVN-IKDAELKTFLHYAIKKGDLESIKMLFEY 146 (434)
T ss_pred CCHHHHHHHHHCCCCCCc-----------chhccCCHHHHHHHHHCcCCCC-CCCCCCccHHHHHHHCCCHHHHHHHHhC
Confidence 999999999999877532 2334467899999999998876 5677799999999999999999999999
Q ss_pred CCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCC
Q 005931 165 RPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYG 244 (669)
Q Consensus 165 ~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g 244 (669)
+.+. +..|.+|.||||+|+..|+.+++++|+++|++++.. +..|.||||.|+..|+.++++.|+..+ .+++..+..|
T Consensus 147 gad~-n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g-~~i~~~~~~g 223 (434)
T PHA02874 147 GADV-NIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVK-DNNGESPLHNAAEYGDYACIKLLIDHG-NHIMNKCKNG 223 (434)
T ss_pred CCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCcCCCCCC
Confidence 8875 678999999999999999999999999999998876 899999999999999999998888665 6788899999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcC-CHHHHHHHHHhcCcccccccCCCCCHHHHHHHc
Q 005931 245 ETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRK-NYQFVEYIIKETVLDIYCRNHKNQTALDIIEQA 323 (669)
Q Consensus 245 ~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~-~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~ 323 (669)
.||||.|+..+. +++++|+. +..++.+|.+|+||||+|+..+ +.+++++|+ ..|+|++.+|..|.|||++|.+.
T Consensus 224 ~TpL~~A~~~~~-~~i~~Ll~---~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll-~~gad~n~~d~~g~TpL~~A~~~ 298 (434)
T PHA02874 224 FTPLHNAIIHNR-SAIELLIN---NASINDQDIDGSTPLHHAINPPCDIDIIDILL-YHKADISIKDNKGENPIDTAFKY 298 (434)
T ss_pred CCHHHHHHHCCh-HHHHHHHc---CCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHH-HCcCCCCCCCCCCCCHHHHHHHh
Confidence 999999999876 56677764 5678999999999999999876 789999999 78899999999999999999987
Q ss_pred CC
Q 005931 324 GT 325 (669)
Q Consensus 324 ~~ 325 (669)
+.
T Consensus 299 ~~ 300 (434)
T PHA02874 299 IN 300 (434)
T ss_pred CC
Confidence 73
No 2
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=8.3e-39 Score=339.54 Aligned_cols=305 Identities=26% Similarity=0.350 Sum_probs=207.2
Q ss_pred CHHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcC
Q 005931 6 AQNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQG 85 (669)
Q Consensus 6 ~~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g 85 (669)
+.+|+.|+..+.++.++.+++ . +....-++.++.+|||+|+..|+.++++.|++.+.+ ++..|..|.||||.||..+
T Consensus 89 n~~l~~a~~~~~~~~i~~Lls-~-gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~d-vnl~de~~~TpLh~A~~~~ 165 (929)
T KOG0510|consen 89 NTPLHAAVEYNQGDKIQVLLS-Y-GADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGAD-VNLEDENGFTPLHLAARKN 165 (929)
T ss_pred CchhHHHhhcchHHHHHHHHh-c-CCCCChhhhhccCchhhccccchHHHHHHHHHhcCC-ccccccCCCchhhHHHhcC
Confidence 344677777777777777776 2 244555667777777777777777777777777755 6777777777777777777
Q ss_pred CHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcC-----CCccccccCCCCCcHHHHHHHcCCHHHHHH
Q 005931 86 NHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQ-----SWLMEFEEDSVESTPIYLAISRGHTDIARE 160 (669)
Q Consensus 86 ~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~-----~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~ 160 (669)
+.|..+.|++.|++.... |.+|..|+|.|+++|..|+.+..+.+ ....+ ..+..+.+|||.|+..|+.++++.
T Consensus 166 ~~E~~k~Li~~~a~~~K~-~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in-~~~n~~~~pLhlAve~g~~e~lk~ 243 (929)
T KOG0510|consen 166 KVEAKKELINKGADPCKS-DIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHIN-FDNNEKATPLHLAVEGGDIEMLKM 243 (929)
T ss_pred hHHHHHHHHhcCCCCCcc-cCcCCchHHHHHHhcchhhhhhhhccccchhhcccc-cccCCCCcchhhhhhcCCHHHHHH
Confidence 777667777777765443 67777777777777777777777752 22222 234446677777777777777777
Q ss_pred HHhcCCcc--------------cCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHH
Q 005931 161 ILEVRPRF--------------AGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKIL 226 (669)
Q Consensus 161 Ll~~~~~~--------------~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v 226 (669)
+|+.+... .+..|.+|+||||+||+.|+.++++.|+..|++++.+ +.++.||||.||..|+.+.+
T Consensus 244 ~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~k-n~d~~spLH~AA~yg~~ntv 322 (929)
T KOG0510|consen 244 CLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSK-NKDEESPLHFAAIYGRINTV 322 (929)
T ss_pred HHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCccccc-CCCCCCchHHHHHcccHHHH
Confidence 77655432 2344667777777777777777777777777777765 67777777777777777777
Q ss_pred HHHHh-cCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCc---cCCCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 005931 227 VAFLS-SSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFH---GQDQFGNTVLHLAVLRKNYQFVEYIIKET 302 (669)
Q Consensus 227 ~~LL~-~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in---~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~ 302 (669)
+.||+ ......+..|..|.||||+|++.|+.+++++|++++. +.+ ..|.+|+||||+|+..|+..+|++|+ ..
T Consensus 323 ~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA--~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li-~~ 399 (929)
T KOG0510|consen 323 ERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGA--LFLNMSEADSDGNTALHLAAKYGNTSAVQKLI-SH 399 (929)
T ss_pred HHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcCh--hhhcccccccCCchhhhHHHHhccHHHHHHHH-Hc
Confidence 77776 3344556666777777777777777777777777532 222 44777777777777777777777777 66
Q ss_pred CcccccccCCCCCHHHH
Q 005931 303 VLDIYCRNHKNQTALDI 319 (669)
Q Consensus 303 ~~d~~~~n~~g~T~L~~ 319 (669)
|+++..+|..|.+++|+
T Consensus 400 Ga~I~~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 400 GADIGVKNKKGKSAFDT 416 (929)
T ss_pred CCceeeccccccccccc
Confidence 66777777777777765
No 3
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=374.50 Aligned_cols=330 Identities=18% Similarity=0.206 Sum_probs=274.9
Q ss_pred cCHHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHH------------------------------------
Q 005931 5 MAQNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAA------------------------------------ 48 (669)
Q Consensus 5 m~~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa------------------------------------ 48 (669)
++| ||+|+..|+.|.|+.+++ ..+......|..|.||||+|+
T Consensus 42 ~t~-LH~A~~~g~~e~V~~ll~-~~~~~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 119 (682)
T PHA02876 42 FTA-IHQALQLRQIDIVEEIIQ-QNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLDE 119 (682)
T ss_pred chH-HHHHHHHHhhhHHHHHHH-hCcccchhhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHHH
Confidence 555 999999999999999999 667777888999999999666
Q ss_pred ----------------------------------HcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 005931 49 ----------------------------------RFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLM 94 (669)
Q Consensus 49 ----------------------------------~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll 94 (669)
..|+.+++++|++.|.+ ++.+|..|.||||+||..|+.++|++|+
T Consensus 120 ~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gad-vn~~d~~G~TpLh~Aa~~G~~~iv~~LL 198 (682)
T PHA02876 120 ACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGGAD-VNAKDIYCITPIHYAAERGNAKMVNLLL 198 (682)
T ss_pred HHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 45778899999999988 7889999999999999999999999999
Q ss_pred hhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccc----------------------------cccCCCCCcHH
Q 005931 95 EANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLME----------------------------FEEDSVESTPI 146 (669)
Q Consensus 95 ~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~----------------------------~~~~~~~~t~L 146 (669)
+.|++.... +..|.||||+|+..++.+++++|++.+.... ...+..|.|||
T Consensus 199 ~~Gad~n~~-~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpL 277 (682)
T PHA02876 199 SYGADVNII-ALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPL 277 (682)
T ss_pred HCCCCcCcc-CCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 999987654 7889999999999999999888876543221 13455688999
Q ss_pred HHHHHcCCH-HHHHHHHhcCCcccCCCCCCCChHHHHHHhcC-CHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHH
Q 005931 147 YLAISRGHT-DIAREILEVRPRFAGKTDKNGFSPLHYASSIG-NVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVK 224 (669)
Q Consensus 147 ~~A~~~g~~-~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g-~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e 224 (669)
|+|+..++. ++++.|++.+.+. +..|.+|.||||+|+..| +.+++++|+..|++++.. |..|.||||+|+..+...
T Consensus 278 h~Aa~~~~~~~iv~lLl~~gadi-n~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~-d~~g~TpLh~A~~~~~~~ 355 (682)
T PHA02876 278 HHASQAPSLSRLVPKLLERGADV-NAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAA-DRLYITPLHQASTLDRNK 355 (682)
T ss_pred HHHHhCCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCc-ccCCCcHHHHHHHhCCcH
Confidence 999999986 5888888887764 778889999999999998 589999999999999876 889999999999866544
Q ss_pred HHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCC-HHHHHHHHHhcC
Q 005931 225 ILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKN-YQFVEYIIKETV 303 (669)
Q Consensus 225 ~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~-~~iv~~Ll~~~~ 303 (669)
.+..+|...+.+++.+|..|+||||+|+..++.+++++|++. +.+++..+..|.||||+|+..++ ..++++|+ +.|
T Consensus 356 ~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~--gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll-~~g 432 (682)
T PHA02876 356 DIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDY--GADIEALSQKIGTALHFALCGTNPYMSVKTLI-DRG 432 (682)
T ss_pred HHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCccccCCCCCchHHHHHHcCCHHHHHHHHH-hCC
Confidence 445555667789999999999999999999999999999986 66788889999999999987765 46688888 778
Q ss_pred cccccccCCCCCHHHHHHHcCCCchHHHHHHHHHHhCCCCCCC
Q 005931 304 LDIYCRNHKNQTALDIIEQAGTNDDATSLKKLFKTAGNIGSPE 346 (669)
Q Consensus 304 ~d~~~~n~~g~T~L~~a~~~~~~~~~~~l~~~l~~~~~~~~~~ 346 (669)
+|++.+|..|+||||+|+..+.. ..+.++|...|+..+..
T Consensus 433 adin~~d~~G~TpLh~Aa~~~~~---~~iv~lLl~~Gad~n~~ 472 (682)
T PHA02876 433 ANVNSKNKDLSTPLHYACKKNCK---LDVIEMLLDNGADVNAI 472 (682)
T ss_pred CCCCcCCCCCChHHHHHHHhCCc---HHHHHHHHHCCCCCCCC
Confidence 89999999999999999886532 23556666777665443
No 4
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=351.34 Aligned_cols=301 Identities=20% Similarity=0.238 Sum_probs=253.4
Q ss_pred HhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcC--CHHHHH
Q 005931 14 VRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQG--NHEVSA 91 (669)
Q Consensus 14 ~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g--~~eivk 91 (669)
..++.+.++.|++ . +..++.+|..|.||||+||..|+.++|+.|++.|++ ++.+|..|.||||+|+..+ +.++++
T Consensus 48 ~~~~~~iv~~Ll~-~-Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAd-in~~d~~g~TpLh~A~~~~~~~~e~v~ 124 (446)
T PHA02946 48 KGLDERFVEELLH-R-GYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGAD-PNACDKQHKTPLYYLSGTDDEVIERIN 124 (446)
T ss_pred cCCCHHHHHHHHH-C-cCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCchHHHHH
Confidence 4557788888887 3 356788899999999999999999999999999988 7889999999999998866 489999
Q ss_pred HHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCC--HHHHHHHHhcCCccc
Q 005931 92 FLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGH--TDIAREILEVRPRFA 169 (669)
Q Consensus 92 ~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~--~~iv~~Ll~~~~~~~ 169 (669)
+|+++|+++....+..|.|||| |+..++.+++++|++.+.+.+ ..+..|.||||.|+..++ .+++++|++.+.+.
T Consensus 125 lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~-~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadi- 201 (446)
T PHA02946 125 LLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEAR-IVDKFGKNHIHRHLMSDNPKASTISWMMKLGISP- 201 (446)
T ss_pred HHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhcccccc-ccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCC-
Confidence 9999999988767889999997 667799999999999988776 577789999999887554 68999999998875
Q ss_pred CCCCCCCChHHHHHHhcC--CHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCH-HHHHHHHhcCCCC----------
Q 005931 170 GKTDKNGFSPLHYASSIG--NVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRV-KILVAFLSSSPAS---------- 236 (669)
Q Consensus 170 ~~~d~~g~t~Lh~Aa~~g--~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~-e~v~~LL~~~~~~---------- 236 (669)
+..|.+|.||||+|+..| +.+++++|++ |++++.. |..|.||||+|+..++. ++++.|+..+...
T Consensus 202 n~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~-d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~ 279 (446)
T PHA02946 202 SKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQ-NKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIF 279 (446)
T ss_pred cccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCC-CCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHH
Confidence 778999999999999876 7899999985 8888876 99999999999999885 6666666654211
Q ss_pred ---------cccc-cCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccc
Q 005931 237 ---------FDRL-TTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDI 306 (669)
Q Consensus 237 ---------i~~~-d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~ 306 (669)
++.. +..|+||||+|+.+|+.+++++|+++ +.+|.||||+|+..++.+++++|+ ..|+++
T Consensus 280 ~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~---------~~~~~t~L~~A~~~~~~~~v~~Ll-~~ga~~ 349 (446)
T PHA02946 280 YDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDN---------DIICEDAMYYAVLSEYETMVDYLL-FNHFSV 349 (446)
T ss_pred cCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHC---------CCccccHHHHHHHhCHHHHHHHHH-HCCCCC
Confidence 1111 23578999999999999999999985 236799999999999999999999 788899
Q ss_pred ccccCCCCCHHHHHHHcCCCchHHHHH
Q 005931 307 YCRNHKNQTALDIIEQAGTNDDATSLK 333 (669)
Q Consensus 307 ~~~n~~g~T~L~~a~~~~~~~~~~~l~ 333 (669)
+.. .+|.|||++|...++.+..+.++
T Consensus 350 n~~-~~G~t~l~~a~~~~~~~~~~~ll 375 (446)
T PHA02946 350 DSV-VNGHTCMSECVRLNNPVILSKLM 375 (446)
T ss_pred CCc-cccccHHHHHHHcCCHHHHHHHH
Confidence 986 58999999999998877665554
No 5
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=357.86 Aligned_cols=320 Identities=19% Similarity=0.242 Sum_probs=279.5
Q ss_pred HHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCC
Q 005931 7 QNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGN 86 (669)
Q Consensus 7 ~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~ 86 (669)
..|..|+..|+.+.++.|++ . +..++.+|..|.||||+||..|+.++|++|++.|++ ++..+..|.||||+|+..|+
T Consensus 147 ~~l~~~i~~~~~~i~k~Ll~-~-Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad-~n~~~~~g~t~L~~A~~~~~ 223 (682)
T PHA02876 147 KLIKERIQQDELLIAEMLLE-G-GADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGAD-VNIIALDDLSVLECAVDSKN 223 (682)
T ss_pred HHHHHHHHCCcHHHHHHHHh-C-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-cCccCCCCCCHHHHHHHcCC
Confidence 34888999999999999998 3 466889999999999999999999999999999998 78889999999999999999
Q ss_pred HHHHHHHHhhCCccc----------------------------cccCCCCCcHHHHHHHcCCH-HHHHHHHcCCCccccc
Q 005931 87 HEVSAFLMEANPTVA----------------------------TKLNHESQSAFSLACRQGHL-DVVKLLINQSWLMEFE 137 (669)
Q Consensus 87 ~eivk~Ll~~~~~~~----------------------------~~~~~~g~tpL~~A~~~g~~-eiv~~Ll~~~~~~~~~ 137 (669)
.+++++|++.+++.. ...+..|.||||+|+..++. +++++|++.+.+.+ .
T Consensus 224 ~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin-~ 302 (682)
T PHA02876 224 IDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVN-A 302 (682)
T ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCC-C
Confidence 999988887654421 12366899999999999996 69999999998876 5
Q ss_pred cCCCCCcHHHHHHHcC-CHHHHHHHHhcCCcccCCCCCCCChHHHHHHhc-CCHHHHHHHHhcCCccccccCCCCChHHH
Q 005931 138 EDSVESTPIYLAISRG-HTDIAREILEVRPRFAGKTDKNGFSPLHYASSI-GNVNMTKLLLNHNKDLALQYNKDGYTPLH 215 (669)
Q Consensus 138 ~~~~~~t~L~~A~~~g-~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~-g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh 215 (669)
.+..|.||||.|+..| ..++++.|+..+.+. +..|..|.||||+|+.. ++.+++++|++.|++++.. |..|.||||
T Consensus 303 ~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadi-n~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~-d~~G~TpLh 380 (682)
T PHA02876 303 KNIKGETPLYLMAKNGYDTENIRTLIMLGADV-NAADRLYITPLHQASTLDRNKDIVITLLELGANVNAR-DYCDKTPIH 380 (682)
T ss_pred cCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCC-CCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccC-CCCCCCHHH
Confidence 6778999999999999 599999999988875 77899999999999985 5789999999999999986 999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCC-HHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcC-CHH
Q 005931 216 LAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDK-YNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRK-NYQ 293 (669)
Q Consensus 216 ~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~-~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~-~~~ 293 (669)
+|+..|+.++++.|+.. +.+++..+..|.||||+|+..++ ..++++|++. +.++|.+|.+|+||||+|+..+ +.+
T Consensus 381 ~Aa~~~~~~iv~~Ll~~-gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~--gadin~~d~~G~TpLh~Aa~~~~~~~ 457 (682)
T PHA02876 381 YAAVRNNVVIINTLLDY-GADIEALSQKIGTALHFALCGTNPYMSVKTLIDR--GANVNSKNKDLSTPLHYACKKNCKLD 457 (682)
T ss_pred HHHHcCCHHHHHHHHHC-CCCccccCCCCCchHHHHHHcCCHHHHHHHHHhC--CCCCCcCCCCCChHHHHHHHhCCcHH
Confidence 99999999999888865 57899999999999999998665 5678999986 7789999999999999999976 689
Q ss_pred HHHHHHHhcCcccccccCCCCCHHHHHHHcCCCchHHHHHHHHHHhCCC
Q 005931 294 FVEYIIKETVLDIYCRNHKNQTALDIIEQAGTNDDATSLKKLFKTAGNI 342 (669)
Q Consensus 294 iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~~~~~~~~l~~~l~~~~~~ 342 (669)
++++|+ +.|+|++.+|..|.||+++|...+. +.+.+...++.
T Consensus 458 iv~lLl-~~Gad~n~~d~~g~tpl~~a~~~~~------~v~~Ll~~~a~ 499 (682)
T PHA02876 458 VIEMLL-DNGADVNAINIQNQYPLLIALEYHG------IVNILLHYGAE 499 (682)
T ss_pred HHHHHH-HCCCCCCCCCCCCCCHHHHHHHhCC------HHHHHHHCCCC
Confidence 999999 7789999999999999999987542 34455555544
No 6
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=2.7e-37 Score=334.52 Aligned_cols=309 Identities=14% Similarity=0.181 Sum_probs=259.4
Q ss_pred HHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHH--cCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcC
Q 005931 8 NLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAAR--FGHVELVTEITKLCPELVAAENEKLETPLHEACCQG 85 (669)
Q Consensus 8 ~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~--~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g 85 (669)
++|.++..++.+.++.+++.. ....+.++||.++. .++.++|++|++.|++ ++.+|..|.||||+|+..|
T Consensus 12 sl~~~~~~~n~~~~~~~l~~~-------~~~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~G~TpLh~Aa~~g 83 (446)
T PHA02946 12 SLYAKYNSKNLDVFRNMLQAI-------EPSGNYHILHAYCGIKGLDERFVEELLHRGYS-PNETDDDGNYPLHIASKIN 83 (446)
T ss_pred HHHHHHccCcHHHHHHHHhcc-------CCCCCChHHHHHHHhcCCCHHHHHHHHHCcCC-CCccCCCCCCHHHHHHHcC
Confidence 478999999999999998721 12224799998875 4468999999999998 7899999999999999999
Q ss_pred CHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCC--HHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 005931 86 NHEVSAFLMEANPTVATKLNHESQSAFSLACRQGH--LDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILE 163 (669)
Q Consensus 86 ~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~--~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~ 163 (669)
+.++|++|+++|++++.. |..|.||||+|+..++ .+++++|++++.+.+...+..|.|||| |+..++.++++.|++
T Consensus 84 ~~eiv~lLL~~GAdin~~-d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~ 161 (446)
T PHA02946 84 NNRIVAMLLTHGADPNAC-DKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMS 161 (446)
T ss_pred CHHHHHHHHHCcCCCCCC-CCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHh
Confidence 999999999999998754 9999999999988764 899999999999887667888999997 667799999999999
Q ss_pred cCCcccCCCCCCCChHHHHHHhcC--CHHHHHHHHhcCCccccccCCCCChHHHHHHHcC--CHHHHHHHHhcCCCCccc
Q 005931 164 VRPRFAGKTDKNGFSPLHYASSIG--NVNMTKLLLNHNKDLALQYNKDGYTPLHLAAING--RVKILVAFLSSSPASFDR 239 (669)
Q Consensus 164 ~~~~~~~~~d~~g~t~Lh~Aa~~g--~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g--~~e~v~~LL~~~~~~i~~ 239 (669)
.+.+. +..|..|.||||+|+..+ +.+++++|+++|++++.. |.+|.||||+|+.+| +.++++.|+. +++++.
T Consensus 162 ~gad~-~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~-d~~G~TpLH~Aa~~~~~~~~iv~lLl~--gadin~ 237 (446)
T PHA02946 162 IGFEA-RIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKP-DHDGNTPLHIVCSKTVKNVDIINLLLP--STDVNK 237 (446)
T ss_pred ccccc-cccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCccc-CCCCCCHHHHHHHcCCCcHHHHHHHHc--CCCCCC
Confidence 88775 788999999999988754 479999999999999986 999999999999986 7888777763 689999
Q ss_pred ccCCCCcHHHHHHHcCC-HHHHHHHHHhcCCC------------------CCccC-CCCCCcHHHHHHHcCCHHHHHHHH
Q 005931 240 LTTYGETVFHLAVRFDK-YNAFKFLAESFNTC------------------LFHGQ-DQFGNTVLHLAVLRKNYQFVEYII 299 (669)
Q Consensus 240 ~d~~g~t~Lh~Av~~~~-~~iv~~Ll~~~~~~------------------~in~~-D~~G~TpLh~A~~~~~~~iv~~Ll 299 (669)
+|..|+||||+|++.++ .+++++|++.+... .++.. +..|.||||+|+..|+.+++++|+
T Consensus 238 ~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll 317 (446)
T PHA02946 238 QNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLL 317 (446)
T ss_pred CCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999988 58999998863210 01222 246889999999999999999999
Q ss_pred HhcCcccccccCCCCCHHHHHHHcCCCchHHHHHHHHHHhCCC
Q 005931 300 KETVLDIYCRNHKNQTALDIIEQAGTNDDATSLKKLFKTAGNI 342 (669)
Q Consensus 300 ~~~~~d~~~~n~~g~T~L~~a~~~~~~~~~~~l~~~l~~~~~~ 342 (669)
++ + ..|.|||++|...++ ..+.+++...|+.
T Consensus 318 ~~-~-------~~~~t~L~~A~~~~~----~~~v~~Ll~~ga~ 348 (446)
T PHA02946 318 DN-D-------IICEDAMYYAVLSEY----ETMVDYLLFNHFS 348 (446)
T ss_pred HC-C-------CccccHHHHHHHhCH----HHHHHHHHHCCCC
Confidence 54 3 368999999999875 4456666677755
No 7
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=5.3e-38 Score=333.48 Aligned_cols=303 Identities=24% Similarity=0.302 Sum_probs=266.6
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCc
Q 005931 31 RILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQS 110 (669)
Q Consensus 31 ~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~t 110 (669)
......|..|+||||+|+.....+.++.|++.|++ +...|.++.+|+|+|+..|+.++++.|++++.+++.. +..|.|
T Consensus 79 ~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad-~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~-de~~~T 156 (929)
T KOG0510|consen 79 AISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGAD-TPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLE-DENGFT 156 (929)
T ss_pred hhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCC-CChhhhhccCchhhccccchHHHHHHHHHhcCCcccc-ccCCCc
Confidence 34566799999999999999999999999999999 8899999999999999999999999999999887655 899999
Q ss_pred HHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCC----cccCCCCCCCChHHHHHHhc
Q 005931 111 AFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRP----RFAGKTDKNGFSPLHYASSI 186 (669)
Q Consensus 111 pL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~----~~~~~~d~~g~t~Lh~Aa~~ 186 (669)
|||+||..++.|..+.|++.++++. ..+..+.+|+|.|++.|..++.+.++.+.+ ..++..+.++.||||.|+..
T Consensus 157 pLh~A~~~~~~E~~k~Li~~~a~~~-K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~ 235 (929)
T KOG0510|consen 157 PLHLAARKNKVEAKKELINKGADPC-KSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEG 235 (929)
T ss_pred hhhHHHhcChHHHHHHHHhcCCCCC-cccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhc
Confidence 9999999999998899999998876 677789999999999999999999998322 22466688899999999999
Q ss_pred CCHHHHHHHHhcCCcccc--------------ccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHH
Q 005931 187 GNVNMTKLLLNHNKDLAL--------------QYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAV 252 (669)
Q Consensus 187 g~~eiv~~Ll~~g~~~~~--------------~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av 252 (669)
|+.++++..|+.|+.... ..|++|.||||+|++.|+.+.+..|+.. |++++.++.+++||||.|+
T Consensus 236 g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~-Ga~I~~kn~d~~spLH~AA 314 (929)
T KOG0510|consen 236 GDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGF-GASINSKNKDEESPLHFAA 314 (929)
T ss_pred CCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHc-CCcccccCCCCCCchHHHH
Confidence 999999999998765432 2488999999999999999998777655 5899999999999999999
Q ss_pred HcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccc---cccCCCCCHHHHHHHcCCCchH
Q 005931 253 RFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIY---CRNHKNQTALDIIEQAGTNDDA 329 (669)
Q Consensus 253 ~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~---~~n~~g~T~L~~a~~~~~~~~~ 329 (669)
.+|+.+.++-|++..+..++|..|..|+||||+|++.|+.+++++|| +.|++.. ..|.+|.||||+|+..|+...+
T Consensus 315 ~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl-~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av 393 (929)
T KOG0510|consen 315 IYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLL-NKGALFLNMSEADSDGNTALHLAAKYGNTSAV 393 (929)
T ss_pred HcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHH-hcChhhhcccccccCCchhhhHHHHhccHHHH
Confidence 99999999999995567899999999999999999999999999999 5555544 5699999999999999987665
Q ss_pred HHHHHHHHHhCCC
Q 005931 330 TSLKKLFKTAGNI 342 (669)
Q Consensus 330 ~~l~~~l~~~~~~ 342 (669)
+.+ ...|+.
T Consensus 394 ~~L----i~~Ga~ 402 (929)
T KOG0510|consen 394 QKL----ISHGAD 402 (929)
T ss_pred HHH----HHcCCc
Confidence 444 445544
No 8
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=3.3e-37 Score=343.02 Aligned_cols=318 Identities=16% Similarity=0.105 Sum_probs=254.0
Q ss_pred HhCCHHHHHHHHcCcchhhhccc-CCCCChHHHHHHH--cCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCC--HH
Q 005931 14 VRNDKQALINLVGCSNKRILLQR-DASLNTALHLAAR--FGHVELVTEITKLCPELVAAENEKLETPLHEACCQGN--HE 88 (669)
Q Consensus 14 ~~gd~~~l~~ll~~~~~~~l~~~-d~~g~T~Lh~Aa~--~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~--~e 88 (669)
..++.+.++.|++ .+...++.+ |..|.||||.|+. +++.++|++|++.|++ ++.+|..|.||||+|++.|+ .+
T Consensus 151 ~~v~leiVk~LLe-~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GAD-VN~kD~~G~TPLH~Aa~~g~~~~e 228 (764)
T PHA02716 151 RGIDLDLIKYMVD-VGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVN-VNLQNNHLITPLHTYLITGNVCAS 228 (764)
T ss_pred cCCCHHHHHHHHH-CCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCCCHH
Confidence 4689999999998 432457777 8999999999875 4679999999999998 88999999999999999995 59
Q ss_pred HHHHHHhhCCccccccCCCCCcHHHHHH---HcCCHHHHHHHHcCCCccccccCCCCCcHHH---HHHHcCCHHHHHHHH
Q 005931 89 VSAFLMEANPTVATKLNHESQSAFSLAC---RQGHLDVVKLLINQSWLMEFEEDSVESTPIY---LAISRGHTDIAREIL 162 (669)
Q Consensus 89 ivk~Ll~~~~~~~~~~~~~g~tpL~~A~---~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~---~A~~~g~~~iv~~Ll 162 (669)
+|++|+++|++++.. +..|.||||.|+ ..++.++++.|++....... .....+++ .|+..|+.++++.|+
T Consensus 229 IVklLLe~GADVN~k-D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~---~~~~~~L~~~i~AA~~g~leiVklLL 304 (764)
T PHA02716 229 VIKKIIELGGDMDMK-CVNGMSPIMTYIINIDNINPEITNIYIESLDGNKV---KNIPMILHSYITLARNIDISVVYSFL 304 (764)
T ss_pred HHHHHHHcCCCCCCC-CCCCCCHHHHHHHhhhccCHHHHHHHHHhcccccc---ccchhhhHHHHHHHHcCCHHHHHHHH
Confidence 999999999998765 889999999875 56788999999876432211 11112333 478889999999999
Q ss_pred hcCCcccCCCCCCCChHHHHHHh--cCCHHHHHHHHhcCCccccccCCCCChHHHHHHH--------------cCCHHHH
Q 005931 163 EVRPRFAGKTDKNGFSPLHYASS--IGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAI--------------NGRVKIL 226 (669)
Q Consensus 163 ~~~~~~~~~~d~~g~t~Lh~Aa~--~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~--------------~g~~e~v 226 (669)
+.+.+. +.+|.+|.||||+|+. .++.+++++|+++|++++.. |..|.||||+|+. .++.+++
T Consensus 305 e~GAdI-N~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~k-D~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVV 382 (764)
T PHA02716 305 QPGVKL-HYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEP-DNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVI 382 (764)
T ss_pred hCCCce-eccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccC-CCCCCCHHHHHHHhhhhhccccccccccChHHHH
Confidence 988875 6778999999998764 46789999999999998875 8899999998865 3678888
Q ss_pred HHHHhcCCCCcccccCCCCcHHHH----HHHcCCHHHHHHHHHhcC----------------------------------
Q 005931 227 VAFLSSSPASFDRLTTYGETVFHL----AVRFDKYNAFKFLAESFN---------------------------------- 268 (669)
Q Consensus 227 ~~LL~~~~~~i~~~d~~g~t~Lh~----Av~~~~~~iv~~Ll~~~~---------------------------------- 268 (669)
+.|+.. |++++.+|..|.||||. |...++.+++++|++...
T Consensus 383 klLL~~-GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~ 461 (764)
T PHA02716 383 QCLISL-GADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPT 461 (764)
T ss_pred HHHHHC-CCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcch
Confidence 877764 58899999999999994 233567888888776310
Q ss_pred -------------------------CCCCccCCCCCCcHHHHHHHcCCH-----HHHHHHHHhcCcccccccCCCCCHHH
Q 005931 269 -------------------------TCLFHGQDQFGNTVLHLAVLRKNY-----QFVEYIIKETVLDIYCRNHKNQTALD 318 (669)
Q Consensus 269 -------------------------~~~in~~D~~G~TpLh~A~~~~~~-----~iv~~Ll~~~~~d~~~~n~~g~T~L~ 318 (669)
...+|..|..|+||||+|+..|+. +++++|+ +.|+|+|.+|.+|+|||+
T Consensus 462 ~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL-~~GADIN~~d~~G~TPLh 540 (764)
T PHA02716 462 DLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLL-SIQYNINIPTKNGVTPLM 540 (764)
T ss_pred hhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHH-hCCCCCcccCCCCCCHHH
Confidence 112355688999999999999876 4559999 789999999999999999
Q ss_pred HHHHcCCCc-hHHHHHHHHHHhCC
Q 005931 319 IIEQAGTND-DATSLKKLFKTAGN 341 (669)
Q Consensus 319 ~a~~~~~~~-~~~~l~~~l~~~~~ 341 (669)
+|.+.++.+ ....+.+++...|+
T Consensus 541 ~A~~~g~~~~~~~eIvk~LL~~ga 564 (764)
T PHA02716 541 LTMRNNRLSGHQWYIVKNILDKRP 564 (764)
T ss_pred HHHHcCCccccHHHHHHHHHhcCC
Confidence 999999763 33456666666654
No 9
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.2e-36 Score=336.40 Aligned_cols=295 Identities=20% Similarity=0.201 Sum_probs=259.4
Q ss_pred cCHHHHHH---HHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcC---CHHHHHHHHHhCCccccccCCCCCcHH
Q 005931 5 MAQNLSEA---IVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFG---HVELVTEITKLCPELVAAENEKLETPL 78 (669)
Q Consensus 5 m~~~L~~A---i~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g---~~e~vk~Ll~~~~~~~~~~n~~g~TpL 78 (669)
+...|+.. ...++.+.++.|++ . +..++.++..|.||||+|+..| +.++++.|++.|++ ++.++..|.|||
T Consensus 11 ~~~~l~~~~~~~~~~~~~~v~~Ll~-~-ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gad-in~~~~~g~TpL 87 (471)
T PHA03095 11 MEAALYDYLLNASNVTVEEVRRLLA-A-GADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGAD-VNAPERCGFTPL 87 (471)
T ss_pred hHHHHHHHHHcCCCCCHHHHHHHHH-c-CCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCC-CCCCCCCCCCHH
Confidence 34445444 67889999999998 3 4668889999999999999999 99999999999998 788999999999
Q ss_pred HHHHHcC-CHHHHHHHHhhCCccccccCCCCCcHHHHHH--HcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcC--
Q 005931 79 HEACCQG-NHEVSAFLMEANPTVATKLNHESQSAFSLAC--RQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRG-- 153 (669)
Q Consensus 79 h~Aa~~g-~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~--~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g-- 153 (669)
|+|+..| +.+++++|++.|+++... +..|.||||+|+ ..++.+++++|++.+.+.+ ..+..|.||||.|+..+
T Consensus 88 h~A~~~~~~~~iv~lLl~~ga~in~~-~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~-~~d~~g~tpL~~a~~~~~~ 165 (471)
T PHA03095 88 HLYLYNATTLDVIKLLIKAGADVNAK-DKVGRTPLHVYLSGFNINPKVIRLLLRKGADVN-ALDLYGMTPLAVLLKSRNA 165 (471)
T ss_pred HHHHHcCCcHHHHHHHHHcCCCCCCC-CCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCC
Confidence 9999999 599999999999998665 889999999999 5668999999999998876 56778999999998876
Q ss_pred CHHHHHHHHhcCCcccCCCCCCCChHHHHHHhc--CCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCH--HHHHHH
Q 005931 154 HTDIAREILEVRPRFAGKTDKNGFSPLHYASSI--GNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRV--KILVAF 229 (669)
Q Consensus 154 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~--g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~--e~v~~L 229 (669)
+.++++.|++.+.+... .|..|.||||+++.. ++.++++.|+++|++++.. |..|.||||+|+..|+. .++..+
T Consensus 166 ~~~iv~~Ll~~g~~~~~-~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~-d~~g~tpLh~Aa~~~~~~~~~v~~l 243 (471)
T PHA03095 166 NVELLRLLIDAGADVYA-VDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAAT-DMLGNTPLHSMATGSSCKRSLVLPL 243 (471)
T ss_pred CHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCccc-CCCCCCHHHHHHhcCCchHHHHHHH
Confidence 68999999999988744 489999999999864 7889999999999999986 99999999999999975 344444
Q ss_pred HhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccc
Q 005931 230 LSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCR 309 (669)
Q Consensus 230 L~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~ 309 (669)
+ ..+.+++.+|..|+||||+|+..|+.+++++|++. +++++.+|.+|+||||+|+..++.++++.|+ ..+.+++..
T Consensus 244 l-~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~--gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL-~~~~~~~~~ 319 (471)
T PHA03095 244 L-IAGISINARNRYGQTPLHYAAVFNNPRACRRLIAL--GADINAVSSDGNTPLSLMVRNNNGRAVRAAL-AKNPSAETV 319 (471)
T ss_pred H-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHhCCHHHHHHHH-HhCCCHHHH
Confidence 4 55689999999999999999999999999999986 7788999999999999999999999999999 555666554
Q ss_pred c
Q 005931 310 N 310 (669)
Q Consensus 310 n 310 (669)
+
T Consensus 320 ~ 320 (471)
T PHA03095 320 A 320 (471)
T ss_pred H
Confidence 4
No 10
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=6.3e-36 Score=329.95 Aligned_cols=302 Identities=19% Similarity=0.254 Sum_probs=252.7
Q ss_pred HHHHHHHhCCHHHHHHHHcC--cchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcC
Q 005931 8 NLSEAIVRNDKQALINLVGC--SNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQG 85 (669)
Q Consensus 8 ~L~~Ai~~gd~~~l~~ll~~--~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g 85 (669)
+||.++..++.+.+.+.++. ..+...+.....+.||||.||..|+.++|++|++.|++ ++.+|..|.||||+||..|
T Consensus 3 ~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~gad-vn~~d~~g~TpLh~A~~~g 81 (477)
T PHA02878 3 KLYKSMYTDNYETILKYIEYIDHTENYSTSASLIPFIPLHQAVEARNLDVVKSLLTRGHN-VNQPDHRDLTPLHIICKEP 81 (477)
T ss_pred hHHHHHHhccHHHHHHHHHHHhhhhhhcCcccccCcchHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCc
Confidence 38999999998778777762 12223344466789999999999999999999999988 7899999999999999999
Q ss_pred CHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcC--CHHHHHHHHh
Q 005931 86 NHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRG--HTDIAREILE 163 (669)
Q Consensus 86 ~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g--~~~iv~~Ll~ 163 (669)
+.++++.|++.+..... ..+.+|++.|+..++.+++++|+..+.......+ ...+......+ ..++++.|++
T Consensus 82 ~~~~v~~Ll~~~~~~~~---~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~iv~~Ll~ 155 (477)
T PHA02878 82 NKLGMKEMIRSINKCSV---FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTID---LVYIDKKSKDDIIEAEITKLLLS 155 (477)
T ss_pred cHhHHHHHHHHHhcccc---ccchhhHHHHHHcCCHHHHHHHHhCcccCcccCc---HHHHhhccchhhHHHHHHHHHHH
Confidence 99999999998765432 4678999999999999999999987543221111 11111111122 3459999999
Q ss_pred cCCcccCCCCCC-CChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccC
Q 005931 164 VRPRFAGKTDKN-GFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTT 242 (669)
Q Consensus 164 ~~~~~~~~~d~~-g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~ 242 (669)
.+.+. +..+.. |.||||+|+..|+.+++++|+++|++++.. |..|.||||.|+..|+.++++.|+.. +++++.+|.
T Consensus 156 ~gadi-n~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~-d~~g~tpLh~A~~~~~~~iv~~Ll~~-ga~in~~d~ 232 (477)
T PHA02878 156 YGADI-NMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIP-DKTNNSPLHHAVKHYNKPIVHILLEN-GASTDARDK 232 (477)
T ss_pred cCCCC-CccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHhCCHHHHHHHHHc-CCCCCCCCC
Confidence 99886 666777 999999999999999999999999999876 99999999999999999998888754 589999999
Q ss_pred CCCcHHHHHHHc-CCHHHHHHHHHhcCCCCCccCCC-CCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHH
Q 005931 243 YGETVFHLAVRF-DKYNAFKFLAESFNTCLFHGQDQ-FGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDII 320 (669)
Q Consensus 243 ~g~t~Lh~Av~~-~~~~iv~~Ll~~~~~~~in~~D~-~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a 320 (669)
.|+||||+|+.. ++.+++++|++. +.++|.++. .|+||||+| .++.+++++|+ +.|+|++.+|..|.|||++|
T Consensus 233 ~g~TpLh~A~~~~~~~~iv~~Ll~~--gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll-~~gadin~~d~~g~TpL~~A 307 (477)
T PHA02878 233 CGNTPLHISVGYCKDYDILKLLLEH--GVDVNAKSYILGLTALHSS--IKSERKLKLLL-EYGADINSLNSYKLTPLSSA 307 (477)
T ss_pred CCCCHHHHHHHhcCCHHHHHHHHHc--CCCCCccCCCCCCCHHHHH--ccCHHHHHHHH-HCCCCCCCcCCCCCCHHHHH
Confidence 999999999976 789999999997 677888875 899999999 56789999999 78899999999999999999
Q ss_pred HHcC
Q 005931 321 EQAG 324 (669)
Q Consensus 321 ~~~~ 324 (669)
....
T Consensus 308 ~~~~ 311 (477)
T PHA02878 308 VKQY 311 (477)
T ss_pred HHHc
Confidence 8754
No 11
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=7.2e-36 Score=330.91 Aligned_cols=287 Identities=18% Similarity=0.264 Sum_probs=257.8
Q ss_pred HHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHH-----HHHcCCH
Q 005931 13 IVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHE-----ACCQGNH 87 (669)
Q Consensus 13 i~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~-----Aa~~g~~ 87 (669)
......+.++.+++ . +...+..+..+.||||.|+..|+.++|++|++.|.+ ++..+..|.||||+ |+..|+.
T Consensus 10 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~-~~~~~~~~~t~L~~~~~~~a~~~~~~ 86 (480)
T PHA03100 10 SRIIKVKNIKYIIM-E-DDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGAD-INSSTKNNSTPLHYLSNIKYNLTDVK 86 (480)
T ss_pred hhHHHHHHHHHHHh-c-CccchhhhcccchhhhhhhccCCHHHHHHHHHcCCC-CCCccccCcCHHHHHHHHHHHhhchH
Confidence 34455677788886 3 355667789999999999999999999999999988 78888999999999 9999999
Q ss_pred HHHHHHHhhCCccccccCCCCCcHHHHHH--HcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcC--CHHHHHHHHh
Q 005931 88 EVSAFLMEANPTVATKLNHESQSAFSLAC--RQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRG--HTDIAREILE 163 (669)
Q Consensus 88 eivk~Ll~~~~~~~~~~~~~g~tpL~~A~--~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g--~~~iv~~Ll~ 163 (669)
+++++|++.|+++ ...+..|.||||+|+ ..|+.+++++|++.+.+.+ ..+..|.||||.|+..+ +.++++.|++
T Consensus 87 ~iv~~Ll~~ga~i-~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~ 164 (480)
T PHA03100 87 EIVKLLLEYGANV-NAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVN-IKNSDGENLLHLYLESNKIDLKILKLLID 164 (480)
T ss_pred HHHHHHHHCCCCC-CCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCC-ccCCCCCcHHHHHHHcCCChHHHHHHHHH
Confidence 9999999999998 455899999999999 9999999999999998876 56777999999999999 9999999999
Q ss_pred cCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCC------ChHHHHHHHcCC--HHHHHHHHhcCCC
Q 005931 164 VRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDG------YTPLHLAAINGR--VKILVAFLSSSPA 235 (669)
Q Consensus 164 ~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g------~tpLh~Aa~~g~--~e~v~~LL~~~~~ 235 (669)
.+.+. +..|..|.||||+|+..|+.+++++|+++|++++.. +..| .||||.|+..|+ .++++.|+.. |.
T Consensus 165 ~g~di-n~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~-g~ 241 (480)
T PHA03100 165 KGVDI-NAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAG-DIETLLFTIFETPLHIAACYNEITLEVVNYLLSY-GV 241 (480)
T ss_pred CCCCc-ccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCC-CCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHc-CC
Confidence 99885 667889999999999999999999999999999876 7777 899999999999 9998888866 58
Q ss_pred CcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccc
Q 005931 236 SFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRN 310 (669)
Q Consensus 236 ~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n 310 (669)
+++.+|..|+||||+|+..++.+++++|++. +++++.+|..|.||||+|+..++.+++++|+ +.|++++..+
T Consensus 242 din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~--gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll-~~g~~i~~i~ 313 (480)
T PHA03100 242 PINIKDVYGFTPLHYAVYNNNPEFVKYLLDL--GANPNLVNKYGDTPLHIAILNNNKEIFKLLL-NNGPSIKTII 313 (480)
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHhCCHHHHHHHH-hcCCCHHHHH
Confidence 8999999999999999999999999999996 5688999999999999999999999999999 6666777554
No 12
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=326.43 Aligned_cols=280 Identities=20% Similarity=0.223 Sum_probs=250.9
Q ss_pred HHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcC---CHHHHHHHHhhCCccccccCCCCCcHHHHHHHcC-C
Q 005931 45 HLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQG---NHEVSAFLMEANPTVATKLNHESQSAFSLACRQG-H 120 (669)
Q Consensus 45 h~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g---~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g-~ 120 (669)
..++..++.++|++|++.|.+ ++.++..|.||||+|+..| +.+++++|++.|++++.. +..|.||||+|+..| +
T Consensus 19 ~~~~~~~~~~~v~~Ll~~ga~-vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~-~~~g~TpLh~A~~~~~~ 96 (471)
T PHA03095 19 LLNASNVTVEEVRRLLAAGAD-VNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAP-ERCGFTPLHLYLYNATT 96 (471)
T ss_pred HHcCCCCCHHHHHHHHHcCCC-cccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCc
Confidence 557778899999999999998 7899999999999999999 999999999999998766 779999999999999 5
Q ss_pred HHHHHHHHcCCCccccccCCCCCcHHHHHH--HcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcC--CHHHHHHHH
Q 005931 121 LDVVKLLINQSWLMEFEEDSVESTPIYLAI--SRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIG--NVNMTKLLL 196 (669)
Q Consensus 121 ~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~--~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g--~~eiv~~Ll 196 (669)
.+++++|++++.+.+ ..+..|.||||.|+ ..++.++++.|++.+.+. +..|..|.||||+|+..+ +.+++++|+
T Consensus 97 ~~iv~lLl~~ga~in-~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~-~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll 174 (471)
T PHA03095 97 LDVIKLLIKAGADVN-AKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADV-NALDLYGMTPLAVLLKSRNANVELLRLLI 174 (471)
T ss_pred HHHHHHHHHcCCCCC-CCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence 999999999998876 56777999999999 556899999999999885 778999999999998866 689999999
Q ss_pred hcCCccccccCCCCChHHHHHHHc--CCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCH--HHHHHHHHhcCCCCC
Q 005931 197 NHNKDLALQYNKDGYTPLHLAAIN--GRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKY--NAFKFLAESFNTCLF 272 (669)
Q Consensus 197 ~~g~~~~~~~~~~g~tpLh~Aa~~--g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~--~iv~~Ll~~~~~~~i 272 (669)
++|+++... +..|.||||.|+.. ++.++++.|+.. +.+++.+|..|+||||+|+..++. .+++.|++. +.++
T Consensus 175 ~~g~~~~~~-d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~-g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~--g~di 250 (471)
T PHA03095 175 DAGADVYAV-DDRFRSLLHHHLQSFKPRARIVRELIRA-GCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIA--GISI 250 (471)
T ss_pred HcCCCCccc-CCCCCCHHHHHHHHCCCcHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHc--CCCC
Confidence 999999987 99999999999875 677777776655 589999999999999999999875 577788875 7789
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHHcCCCchHHHHH
Q 005931 273 HGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQAGTNDDATSLK 333 (669)
Q Consensus 273 n~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~~~~~~~~l~ 333 (669)
|.+|..|+||||+|+..|+.+++++|+ +.|+|++.+|.+|+|||++|...++.+....++
T Consensus 251 n~~d~~g~TpLh~A~~~~~~~~v~~LL-~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL 310 (471)
T PHA03095 251 NARNRYGQTPLHYAAVFNNPRACRRLI-ALGADINAVSSDGNTPLSLMVRNNNGRAVRAAL 310 (471)
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 999999999999999999999999999 778999999999999999999999876655443
No 13
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=3.5e-34 Score=318.89 Aligned_cols=305 Identities=18% Similarity=0.144 Sum_probs=226.0
Q ss_pred ccCHHHHHHHH--hCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCC--HHHHHHHHHhCCccccccCCCCCcHHH
Q 005931 4 GMAQNLSEAIV--RNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGH--VELVTEITKLCPELVAAENEKLETPLH 79 (669)
Q Consensus 4 ~m~~~L~~Ai~--~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~--~e~vk~Ll~~~~~~~~~~n~~g~TpLh 79 (669)
+.+| ||.|+. .++.+.++.|++ . +..++.+|..|.||||+|+..|+ .++|++|++.|++ ++.+|..|+||||
T Consensus 177 G~Tp-LH~A~~n~~~~~eIVklLLe-~-GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GAD-VN~kD~~G~TPLh 252 (764)
T PHA02716 177 GYGI-LHAYLGNMYVDIDILEWLCN-N-GVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGD-MDMKCVNGMSPIM 252 (764)
T ss_pred CCcH-HHHHHHhccCCHHHHHHHHH-c-CCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCC-CCCCCCCCCCHHH
Confidence 4455 887754 468999999998 3 46788999999999999999995 5999999999998 8899999999999
Q ss_pred HHH---HcCCHHHHHHHHhhCCccccccCCCCCcHHH---HHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHH--
Q 005931 80 EAC---CQGNHEVSAFLMEANPTVATKLNHESQSAFS---LACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAIS-- 151 (669)
Q Consensus 80 ~Aa---~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~---~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~-- 151 (669)
+|+ ..++.++++.|++.+..... .....+++ .|+..|+.+++++|++++.+.+ ..+..|+||||.|+.
T Consensus 253 ~Ai~~a~n~~~EIvkiLie~~d~n~~---~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN-~kD~~G~TPLH~Aaa~~ 328 (764)
T PHA02716 253 TYIINIDNINPEITNIYIESLDGNKV---KNIPMILHSYITLARNIDISVVYSFLQPGVKLH-YKDSAGRTCLHQYILRH 328 (764)
T ss_pred HHHHhhhccCHHHHHHHHHhcccccc---ccchhhhHHHHHHHHcCCHHHHHHHHhCCCcee-ccCCCCCCHHHHHHHHh
Confidence 875 45677888888775422111 11112233 3677788888888888777665 456667888887654
Q ss_pred cCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHh--------------cCCHHHHHHHHhcCCccccccCCCCChHHHH-
Q 005931 152 RGHTDIAREILEVRPRFAGKTDKNGFSPLHYASS--------------IGNVNMTKLLLNHNKDLALQYNKDGYTPLHL- 216 (669)
Q Consensus 152 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~--------------~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~- 216 (669)
.++.+++++|++.+.+. +.+|..|+||||+|+. .++.+++++|+++|++++.. |..|.||||.
T Consensus 329 ~~~~eIVklLLe~GADI-N~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~k-n~~G~TPLh~y 406 (764)
T PHA02716 329 NISTDIIKLLHEYGNDL-NEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAV-NCLGYTPLTSY 406 (764)
T ss_pred CCCchHHHHHHHcCCCC-ccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCc-CCCCCChHHHH
Confidence 34677888888777664 6677778888887754 25678888888888877765 7778888873
Q ss_pred ---HHHcCCHHHHHHHHhcC------------------------------------------------------------
Q 005931 217 ---AAINGRVKILVAFLSSS------------------------------------------------------------ 233 (669)
Q Consensus 217 ---Aa~~g~~e~v~~LL~~~------------------------------------------------------------ 233 (669)
|...++.++++.|+...
T Consensus 407 ~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~ 486 (764)
T PHA02716 407 ICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIE 486 (764)
T ss_pred HHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHh
Confidence 22245566665555421
Q ss_pred CCCcccccCCCCcHHHHHHHcCCH-----HHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCH-----HHHHHHHHhcC
Q 005931 234 PASFDRLTTYGETVFHLAVRFDKY-----NAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNY-----QFVEYIIKETV 303 (669)
Q Consensus 234 ~~~i~~~d~~g~t~Lh~Av~~~~~-----~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~-----~iv~~Ll~~~~ 303 (669)
...++..|..|+||||+|+..|+. +++++|++. ++++|.+|.+|+||||+|+++|+. ++++.|| +.|
T Consensus 487 ~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~--GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL-~~g 563 (764)
T PHA02716 487 RYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSI--QYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNIL-DKR 563 (764)
T ss_pred hccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhC--CCCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHH-hcC
Confidence 112345578899999999999886 456999986 788999999999999999999976 9999999 677
Q ss_pred cccccccCCCCCHHHHHHHcCCCc
Q 005931 304 LDIYCRNHKNQTALDIIEQAGTND 327 (669)
Q Consensus 304 ~d~~~~n~~g~T~L~~a~~~~~~~ 327 (669)
++++.. .+.++...++.+
T Consensus 564 a~~~~~------~l~~~~~~~~~~ 581 (764)
T PHA02716 564 PNVDIV------IIFLDKCYANGK 581 (764)
T ss_pred CCcchH------HHHHHhhhhhhH
Confidence 777766 377776555443
No 14
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=7.2e-34 Score=309.97 Aligned_cols=297 Identities=21% Similarity=0.261 Sum_probs=252.9
Q ss_pred ccCHHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHH
Q 005931 4 GMAQNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACC 83 (669)
Q Consensus 4 ~m~~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~ 83 (669)
+.+ +|+.|+..|+.+.++.|++ . +..++..+..|.||||.|+..|+.+++++|++.|.+. . ..+..
T Consensus 35 ~~t-pL~~A~~~g~~~iv~~Ll~-~-Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~-~----------~~~~~ 100 (434)
T PHA02874 35 TTT-PLIDAIRSGDAKIVELFIK-H-GADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDT-S----------ILPIP 100 (434)
T ss_pred CCC-HHHHHHHcCCHHHHHHHHH-C-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-C----------cchhc
Confidence 344 4999999999999999998 3 3556788999999999999999999999999998763 1 12334
Q ss_pred cCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 005931 84 QGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILE 163 (669)
Q Consensus 84 ~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~ 163 (669)
..+.++++.|++.|.++... +..|.||||+|+..|+.+++++|++.+.+.+ ..+..|.||||.|+..++.++++.|++
T Consensus 101 ~~~~~~i~~ll~~g~d~n~~-~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n-~~d~~g~tpLh~A~~~~~~~iv~~Ll~ 178 (434)
T PHA02874 101 CIEKDMIKTILDCGIDVNIK-DAELKTFLHYAIKKGDLESIKMLFEYGADVN-IEDDNGCYPIHIAIKHNFFDIIKLLLE 178 (434)
T ss_pred cCCHHHHHHHHHCcCCCCCC-CCCCccHHHHHHHCCCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 56789999999999998765 8899999999999999999999999998876 567779999999999999999999999
Q ss_pred cCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCC
Q 005931 164 VRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTY 243 (669)
Q Consensus 164 ~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~ 243 (669)
.+.+. +..+..|.||||+|+..|+.+++++|+++|+++... +..|.||||.|+..+. +.+..|+ .+.+++..|..
T Consensus 179 ~g~~~-n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~-~~~g~TpL~~A~~~~~-~~i~~Ll--~~~~in~~d~~ 253 (434)
T PHA02874 179 KGAYA-NVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNK-CKNGFTPLHNAIIHNR-SAIELLI--NNASINDQDID 253 (434)
T ss_pred CCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCC-CCCCCCHHHHHHHCCh-HHHHHHH--cCCCCCCcCCC
Confidence 98775 677899999999999999999999999999998875 8899999999999876 4556555 35788999999
Q ss_pred CCcHHHHHHHcC-CHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcC-CHHHHHHHHHhcCcccccccCCC-CCHHHHH
Q 005931 244 GETVFHLAVRFD-KYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRK-NYQFVEYIIKETVLDIYCRNHKN-QTALDII 320 (669)
Q Consensus 244 g~t~Lh~Av~~~-~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~-~~~iv~~Ll~~~~~d~~~~n~~g-~T~L~~a 320 (669)
|+||||+|+..+ +.+++++|++. +++++.+|..|+||||+|+..+ ..++++.|+ ..++.++..+..+ .+++..+
T Consensus 254 G~TpLh~A~~~~~~~~iv~~Ll~~--gad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll-~~~~~~~~~~~~~~~~~~~~~ 330 (434)
T PHA02874 254 GSTPLHHAINPPCDIDIIDILLYH--KADISIKDNKGENPIDTAFKYINKDPVIKDII-ANAVLIKEADKLKDSDFLEHI 330 (434)
T ss_pred CCCHHHHHHhcCCcHHHHHHHHHC--cCCCCCCCCCCCCHHHHHHHhCCccHHHHHHH-HhcCchhhccccchhHHHHHH
Confidence 999999999876 78999999986 7788999999999999999987 677889988 5555555555444 4555555
Q ss_pred HHcC
Q 005931 321 EQAG 324 (669)
Q Consensus 321 ~~~~ 324 (669)
....
T Consensus 331 ~i~~ 334 (434)
T PHA02874 331 EIKD 334 (434)
T ss_pred HHhc
Confidence 4433
No 15
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=317.26 Aligned_cols=278 Identities=22% Similarity=0.301 Sum_probs=249.4
Q ss_pred CCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHH-----HHHcCCHHHHH
Q 005931 51 GHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSL-----ACRQGHLDVVK 125 (669)
Q Consensus 51 g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~-----A~~~g~~eiv~ 125 (669)
...++++++++.+ +..+..+..+.||||.|+..|+.++|++|++.|+++... +..+.||||+ |+..++.++++
T Consensus 13 ~~~~~~~~~~~~~-~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~-~~~~~t~L~~~~~~~a~~~~~~~iv~ 90 (480)
T PHA03100 13 IKVKNIKYIIMED-DLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSS-TKNNSTPLHYLSNIKYNLTDVKEIVK 90 (480)
T ss_pred HHHHHHHHHHhcC-ccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCc-cccCcCHHHHHHHHHHHhhchHHHHH
Confidence 3457788888765 557778889999999999999999999999999987655 7889999999 99999999999
Q ss_pred HHHcCCCccccccCCCCCcHHHHHH--HcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcC--CHHHHHHHHhcCCc
Q 005931 126 LLINQSWLMEFEEDSVESTPIYLAI--SRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIG--NVNMTKLLLNHNKD 201 (669)
Q Consensus 126 ~Ll~~~~~~~~~~~~~~~t~L~~A~--~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g--~~eiv~~Ll~~g~~ 201 (669)
+|++.+.+.+ ..+..|.||||.|+ ..|+.++++.|++.+.+. +..+..|.||||+|+..| +.+++++|+++|++
T Consensus 91 ~Ll~~ga~i~-~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~d 168 (480)
T PHA03100 91 LLLEYGANVN-APDNNGITPLLYAISKKSNSYSIVEYLLDNGANV-NIKNSDGENLLHLYLESNKIDLKILKLLIDKGVD 168 (480)
T ss_pred HHHHCCCCCC-CCCCCCCchhhHHHhcccChHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCC
Confidence 9999998884 67788999999999 999999999999998875 678899999999999999 99999999999999
Q ss_pred cccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCC------CcHHHHHHHcCC--HHHHHHHHHhcCCCCCc
Q 005931 202 LALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYG------ETVFHLAVRFDK--YNAFKFLAESFNTCLFH 273 (669)
Q Consensus 202 ~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g------~t~Lh~Av~~~~--~~iv~~Ll~~~~~~~in 273 (669)
++.. +..|.||||+|+..|+.++++.|++. +++++..+..| .||||.|+..++ .+++++|++. +.+++
T Consensus 169 in~~-d~~g~tpL~~A~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~--g~din 244 (480)
T PHA03100 169 INAK-NRYGYTPLHIAVEKGNIDVIKFLLDN-GADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSY--GVPIN 244 (480)
T ss_pred cccc-cCCCCCHHHHHHHhCCHHHHHHHHHc-CCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHc--CCCCC
Confidence 9876 88999999999999999998888865 47888888888 999999999999 9999999996 67889
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHHcCCCchHHHHHHHHHHhCC
Q 005931 274 GQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQAGTNDDATSLKKLFKTAGN 341 (669)
Q Consensus 274 ~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~~~~~~~~l~~~l~~~~~ 341 (669)
.+|..|+||||+|+..++.+++++|+ +.|+|++.+|..|.||+++|...++.+. .+++...|+
T Consensus 245 ~~d~~g~TpL~~A~~~~~~~iv~~Ll-~~gad~n~~d~~g~tpl~~A~~~~~~~i----v~~Ll~~g~ 307 (480)
T PHA03100 245 IKDVYGFTPLHYAVYNNNPEFVKYLL-DLGANPNLVNKYGDTPLHIAILNNNKEI----FKLLLNNGP 307 (480)
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCcHHHHHHHhCCHHH----HHHHHhcCC
Confidence 99999999999999999999999999 6777999999999999999999886544 444445553
No 16
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=301.24 Aligned_cols=329 Identities=14% Similarity=0.147 Sum_probs=251.7
Q ss_pred ccCHHHHHHHHhC---CHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcC--CHHHHHHHHHhCCcc-ccccCCCCCcH
Q 005931 4 GMAQNLSEAIVRN---DKQALINLVGCSNKRILLQRDASLNTALHLAARFG--HVELVTEITKLCPEL-VAAENEKLETP 77 (669)
Q Consensus 4 ~m~~~L~~Ai~~g---d~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g--~~e~vk~Ll~~~~~~-~~~~n~~g~Tp 77 (669)
|.++ ||.|+..| +.+.++.|++ .+..++.+|..|.||||+|+..| +.|+|++|++.+... .+..+..+++|
T Consensus 41 G~Ta-Lh~A~~~~~~~~~eivklLLs--~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~ 117 (672)
T PHA02730 41 GNNA-LHCYVSNKCDTDIKIVRLLLS--RGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFD 117 (672)
T ss_pred CCcH-HHHHHHcCCcCcHHHHHHHHh--CCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCch
Confidence 3444 99999987 5899999998 34677889999999999999976 799999999996531 45577778999
Q ss_pred HHHHHH--cCCHHHHHHHHh-hCCccccccC----CCCCcHHHHHHHcCCHHHHHHHHcCCCccc-c------ccCCCCC
Q 005931 78 LHEACC--QGNHEVSAFLME-ANPTVATKLN----HESQSAFSLACRQGHLDVVKLLINQSWLME-F------EEDSVES 143 (669)
Q Consensus 78 Lh~Aa~--~g~~eivk~Ll~-~~~~~~~~~~----~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~-~------~~~~~~~ 143 (669)
||.++. +++.++|++|++ .+.++....+ ..|.+|+++|...++.|+|++|+++++... . ..+....
T Consensus 118 l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~ 197 (672)
T PHA02730 118 LYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCK 197 (672)
T ss_pred HHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccc
Confidence 999998 889999999997 4445443322 478999999999999999999999998873 1 1222234
Q ss_pred cHHHHHH------HcCCHHHHHHHHhcCCcccCCCCCCCChHHHH--HHhcCCHHHHHHHHh------------------
Q 005931 144 TPIYLAI------SRGHTDIAREILEVRPRFAGKTDKNGFSPLHY--ASSIGNVNMTKLLLN------------------ 197 (669)
Q Consensus 144 t~L~~A~------~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~--Aa~~g~~eiv~~Ll~------------------ 197 (669)
|.||+++ ..++.++++.|+++|.+. +.+|.+|.||||+ ++..|+.|++++|++
T Consensus 198 ~~l~~~il~~~~~~~n~~eiv~lLIs~GadI-N~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~ 276 (672)
T PHA02730 198 NSLHYYILSHRESESLSKDVIKCLIDNNVSI-HGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRG 276 (672)
T ss_pred hhHHHHHHhhhhhhccCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhh
Confidence 5566443 456789999999999875 7889999999985 556778999999999
Q ss_pred --------------cCCcccc-------------------ccCCCCCh---------------------HHHHHHHcC--
Q 005931 198 --------------HNKDLAL-------------------QYNKDGYT---------------------PLHLAAING-- 221 (669)
Q Consensus 198 --------------~g~~~~~-------------------~~~~~g~t---------------------pLh~Aa~~g-- 221 (669)
+|++... ..+..|.+ .||.-...+
T Consensus 277 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~ 356 (672)
T PHA02730 277 VLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDM 356 (672)
T ss_pred hHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCc
Confidence 6776643 13555544 566666655
Q ss_pred -CHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCC----HHHHHHHHHhcCCCCCccCCCCCCcHHHH---HHHcC---
Q 005931 222 -RVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDK----YNAFKFLAESFNTCLFHGQDQFGNTVLHL---AVLRK--- 290 (669)
Q Consensus 222 -~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~----~~iv~~Ll~~~~~~~in~~D~~G~TpLh~---A~~~~--- 290 (669)
+.++++.|+++ |++++.. ..|+||||+|+..++ .+++++|++++...++|.+|..|.||||. |...+
T Consensus 357 v~ieIvelLIs~-GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~ 434 (672)
T PHA02730 357 VSIPILRCMLDN-GATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGY 434 (672)
T ss_pred CcHHHHHHHHHC-CCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccc
Confidence 57776666655 5888875 789999999888775 79999999875555789999999999984 33222
Q ss_pred ------CHHHHHHHHHhcCcccccccCCCCCHHHHHHHcCCCchHHHHHHHHHHhCCCC
Q 005931 291 ------NYQFVEYIIKETVLDIYCRNHKNQTALDIIEQAGTNDDATSLKKLFKTAGNIG 343 (669)
Q Consensus 291 ------~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~~~~~~~~l~~~l~~~~~~~ 343 (669)
..+++++|+ ..|+|+|.+|..|+|||++|+..++. .+.++|...|+..
T Consensus 435 ~~~e~~~~~ivk~LI-s~GADINakD~~G~TPLh~Aa~~~~~----eive~LI~~GAdI 488 (672)
T PHA02730 435 HCYETILIDVFDILS-KYMDDIDMIDNENKTLLYYAVDVNNI----QFARRLLEYGASV 488 (672)
T ss_pred cccchhHHHHHHHHH-hcccchhccCCCCCCHHHHHHHhCCH----HHHHHHHHCCCCC
Confidence 235689999 78889999999999999999987754 3456666777653
No 17
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=309.43 Aligned_cols=324 Identities=16% Similarity=0.129 Sum_probs=193.5
Q ss_pred ccCHHHHHHHHh---CCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCH---------------------------
Q 005931 4 GMAQNLSEAIVR---NDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHV--------------------------- 53 (669)
Q Consensus 4 ~m~~~L~~Ai~~---gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~--------------------------- 53 (669)
+.++ ||.|+.. |+.+.++.|++ . +..++.++..|.||||+|+..|+.
T Consensus 32 g~t~-Lh~a~~~~~~~~~~~v~~Ll~-~-ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~ 108 (661)
T PHA02917 32 KNNA-LHAYLFNEHCNNVEVVKLLLD-S-GTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIFSY 108 (661)
T ss_pred CCcH-HHHHHHhhhcCcHHHHHHHHH-C-CCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchHHH
Confidence 4555 8886554 88999999998 3 345577788899999988877663
Q ss_pred --------HHHHHHHHhCCccccccCCCCCcHHHHHH--HcCCHHHHHHHHhhCCccccc--cCCCC-----------Cc
Q 005931 54 --------ELVTEITKLCPELVAAENEKLETPLHEAC--CQGNHEVSAFLMEANPTVATK--LNHES-----------QS 110 (669)
Q Consensus 54 --------e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa--~~g~~eivk~Ll~~~~~~~~~--~~~~g-----------~t 110 (669)
|+|++|++.|++ ++.+|..|.||||.|+ ..|+.+++++|+++|++++.. .+..| .|
T Consensus 109 ~a~~~~~~e~vk~Ll~~Gad-in~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t 187 (661)
T PHA02917 109 MKSKNVDVDLIKVLVEHGFD-LSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGT 187 (661)
T ss_pred HHhhcCCHHHHHHHHHcCCC-CCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccccccccccccc
Confidence 334444444444 4555555666665332 345566666666666555321 01112 36
Q ss_pred HHHHHHH-----------cCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCH--HHHHHHHhcCCccc---CCCCC
Q 005931 111 AFSLACR-----------QGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHT--DIAREILEVRPRFA---GKTDK 174 (669)
Q Consensus 111 pL~~A~~-----------~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~--~iv~~Ll~~~~~~~---~~~d~ 174 (669)
|||+|+. .++.+++++|+++|.+.+ ..+..|.||||+|+.+|+. ++++.|++ +.+.. ...|.
T Consensus 188 ~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn-~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~ 265 (661)
T PHA02917 188 VLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPS-SIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDL 265 (661)
T ss_pred HHHHHHhhcccccccccccCcHHHHHHHHHCCCCcc-cCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCc
Confidence 6666553 345566666666665554 3445556666666665553 45555543 33221 12233
Q ss_pred CCChHHHHHHh-------c--CCHHHHHHHHhcCCcccc-------cc-----------CCCCChHHHHH---HHcCC--
Q 005931 175 NGFSPLHYASS-------I--GNVNMTKLLLNHNKDLAL-------QY-----------NKDGYTPLHLA---AINGR-- 222 (669)
Q Consensus 175 ~g~t~Lh~Aa~-------~--g~~eiv~~Ll~~g~~~~~-------~~-----------~~~g~tpLh~A---a~~g~-- 222 (669)
.|.+|+|+|+. . .+.+++++|++.|++... .. ...+.+++|.+ +..|.
T Consensus 266 ~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~ 345 (661)
T PHA02917 266 TCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDID 345 (661)
T ss_pred ccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCCc
Confidence 44444444441 0 134445555555543210 00 00112222222 22333
Q ss_pred HHHHH-----------------------------HHHhcCCCCcccccCCCCcHHHHHHHcCC-----------------
Q 005931 223 VKILV-----------------------------AFLSSSPASFDRLTTYGETVFHLAVRFDK----------------- 256 (669)
Q Consensus 223 ~e~v~-----------------------------~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~----------------- 256 (669)
.++++ .||...+++++..+.+|+||||.|++.++
T Consensus 346 ~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~ 425 (661)
T PHA02917 346 IPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDM 425 (661)
T ss_pred HHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchh
Confidence 22444 44444445555556679999999875432
Q ss_pred ------HHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHH-cCCCchH
Q 005931 257 ------YNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQ-AGTNDDA 329 (669)
Q Consensus 257 ------~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~-~~~~~~~ 329 (669)
.+++++|+++ ++++|.+|..|+||||+|+..++.+++++|+ +.|+|++.+|..|+|||++|.. .++.
T Consensus 426 ~~~~~~~~~v~~Ll~~--GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll-~~GAdin~~d~~G~T~L~~A~~~~~~~--- 499 (661)
T PHA02917 426 SYACPILSTINICLPY--LKDINMIDKRGETLLHKAVRYNKQSLVSLLL-ESGSDVNIRSNNGYTCIAIAINESRNI--- 499 (661)
T ss_pred hhhhhhHHHHHHHHHC--CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHH-HCcCCCCCCCCCCCCHHHHHHHhCCCH---
Confidence 4577899886 6788999999999999999999999999999 7889999999999999999985 3333
Q ss_pred HHHHHHHHHhC
Q 005931 330 TSLKKLFKTAG 340 (669)
Q Consensus 330 ~~l~~~l~~~~ 340 (669)
.+.+++...+
T Consensus 500 -~iv~~LL~~g 509 (661)
T PHA02917 500 -ELLKMLLCHK 509 (661)
T ss_pred -HHHHHHHHcC
Confidence 3445555544
No 18
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00 E-value=8.3e-33 Score=306.11 Aligned_cols=281 Identities=18% Similarity=0.212 Sum_probs=228.7
Q ss_pred HHHHHH---hCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHc--CCHHHHHHHHHhCCccccccCCCCCcHHHHHHH
Q 005931 9 LSEAIV---RNDKQALINLVGCSNKRILLQRDASLNTALHLAARF--GHVELVTEITKLCPELVAAENEKLETPLHEACC 83 (669)
Q Consensus 9 L~~Ai~---~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~--g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~ 83 (669)
||.-+. ..+.+.++.|++ . +..++.+ ..|.|+||.++.. ++.++|+.|++.|++ ++.++ .+.||||.|+.
T Consensus 4 l~~y~~~~~~~~~~~v~~LL~-~-GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAd-vn~~~-~~~tpL~~a~~ 78 (494)
T PHA02989 4 LYEYILYSDTVDKNALEFLLR-T-GFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGAD-VNYKG-YIETPLCAVLR 78 (494)
T ss_pred HHHHHHcCCcCcHHHHHHHHH-c-CCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCC-ccCCC-CCCCcHHHHHh
Confidence 666655 478999999998 3 3456666 5688988776554 368999999999988 56665 57899999887
Q ss_pred cC------CHHHHHHHHhhCCccccccCCCCCcHHHHHHHc---CCHHHHHHHHcCCCccccccCCCCCcHHHHHHHc--
Q 005931 84 QG------NHEVSAFLMEANPTVATKLNHESQSAFSLACRQ---GHLDVVKLLINQSWLMEFEEDSVESTPIYLAISR-- 152 (669)
Q Consensus 84 ~g------~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~---g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~-- 152 (669)
.+ +.+++++|+++|++++.. +..|.||||.|+.. ++.+++++|+++|++.+...+..|.||||+|+..
T Consensus 79 ~~~~~~~~~~~iv~~Ll~~Gadin~~-d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~ 157 (494)
T PHA02989 79 NREITSNKIKKIVKLLLKFGADINLK-TFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFS 157 (494)
T ss_pred ccCcchhhHHHHHHHHHHCCCCCCCC-CCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhcc
Confidence 54 468999999999997665 88899999988765 6789999999999888446777899999998764
Q ss_pred CCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhc----CCHHHHHHHHhcCCccccccCCCCChHHHHHHHcC------C
Q 005931 153 GHTDIAREILEVRPRFAGKTDKNGFSPLHYASSI----GNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAING------R 222 (669)
Q Consensus 153 g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~----g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g------~ 222 (669)
++.++++.|++.+.+.....+..|.||||.|+.. ++.+++++|+++|++++.. +..+.|+||.++..+ .
T Consensus 158 ~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~-~~~~~t~l~~~~~~~~~~~~~~ 236 (494)
T PHA02989 158 VKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETN-NNGSESVLESFLDNNKILSKKE 236 (494)
T ss_pred CCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCcccc-CCccccHHHHHHHhchhhcccc
Confidence 5789999999999886544677899999998765 4889999999999998876 778899998876543 4
Q ss_pred HHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 005931 223 VKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIK 300 (669)
Q Consensus 223 ~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~ 300 (669)
.+++..++ . +++++.+|..|+||||+|+..++.+++++|++. +++++.+|..|+||||+|+..++.++++.|++
T Consensus 237 ~~il~~l~-~-~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~--Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~ 310 (494)
T PHA02989 237 FKVLNFIL-K-YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKL--GDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQ 310 (494)
T ss_pred hHHHHHHH-h-CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHc--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 55655444 3 378999999999999999999999999999986 67888999999999999999999999999984
No 19
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=304.14 Aligned_cols=274 Identities=16% Similarity=0.193 Sum_probs=234.8
Q ss_pred cCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHc--CCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcC------CH
Q 005931 50 FGHVELVTEITKLCPELVAAENEKLETPLHEACCQ--GNHEVSAFLMEANPTVATKLNHESQSAFSLACRQG------HL 121 (669)
Q Consensus 50 ~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~--g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g------~~ 121 (669)
....++|++|++.|.+ ++.. ..|.||||.++.. ++.++|++|+++|++++.. + .+.||||.|+.++ +.
T Consensus 13 ~~~~~~v~~LL~~Gad-vN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~-~-~~~tpL~~a~~~~~~~~~~~~ 88 (494)
T PHA02989 13 TVDKNALEFLLRTGFD-VNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYK-G-YIETPLCAVLRNREITSNKIK 88 (494)
T ss_pred cCcHHHHHHHHHcCCC-cccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCC-C-CCCCcHHHHHhccCcchhhHH
Confidence 4789999999999998 6666 5799999876654 3789999999999998764 3 5799999998754 47
Q ss_pred HHHHHHHcCCCccccccCCCCCcHHHHHHHc---CCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhc--CCHHHHHHHH
Q 005931 122 DVVKLLINQSWLMEFEEDSVESTPIYLAISR---GHTDIAREILEVRPRFAGKTDKNGFSPLHYASSI--GNVNMTKLLL 196 (669)
Q Consensus 122 eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~---g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~--g~~eiv~~Ll 196 (669)
+++++|+++|++.+ ..+..|.||||.|+.. ++.++++.|+++|.+..+..|..|.||||+|+.. ++.+++++|+
T Consensus 89 ~iv~~Ll~~Gadin-~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll 167 (494)
T PHA02989 89 KIVKLLLKFGADIN-LKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILL 167 (494)
T ss_pred HHHHHHHHCCCCCC-CCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHH
Confidence 89999999999887 5677799999988765 6799999999999886467889999999998754 6899999999
Q ss_pred hcCCccccccCCCCChHHHHHHHcC----CHHHHHHHHhcCCCCcccccCCCCcHHHHHHHc------CCHHHHHHHHHh
Q 005931 197 NHNKDLALQYNKDGYTPLHLAAING----RVKILVAFLSSSPASFDRLTTYGETVFHLAVRF------DKYNAFKFLAES 266 (669)
Q Consensus 197 ~~g~~~~~~~~~~g~tpLh~Aa~~g----~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~------~~~~iv~~Ll~~ 266 (669)
++|++++...+..|.||||.|+..+ +.++++.|++. |++++..+..|.|+||.++.. +..+++++|+.
T Consensus 168 ~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~-Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~- 245 (494)
T PHA02989 168 SFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKK-GVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK- 245 (494)
T ss_pred HcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhC-CCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-
Confidence 9999998755889999999998764 88998887765 578999999999999987764 35678888775
Q ss_pred cCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHHcCCCchHHHHH
Q 005931 267 FNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQAGTNDDATSLK 333 (669)
Q Consensus 267 ~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~~~~~~~~l~ 333 (669)
+.++|.+|..|+||||+|+..++.+++++|+ +.|+|++.+|..|.|||++|...++.+.++.++
T Consensus 246 --~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL-~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL 309 (494)
T PHA02989 246 --YIKINKKDKKGFNPLLISAKVDNYEAFNYLL-KLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRIL 309 (494)
T ss_pred --CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHH-HcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 5789999999999999999999999999999 778999999999999999999998766554443
No 20
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=302.81 Aligned_cols=296 Identities=17% Similarity=0.168 Sum_probs=243.5
Q ss_pred cCHHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHc
Q 005931 5 MAQNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQ 84 (669)
Q Consensus 5 m~~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~ 84 (669)
.+| ||.|+..|+.+.++.|++ . +..++.+|..|.||||+||..|+.+++++|++.+... .. ..+.+|++.|+..
T Consensus 38 ~tP-Lh~A~~~g~~e~vk~Ll~-~-gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~-~~--~~~~~~l~~a~~~ 111 (477)
T PHA02878 38 FIP-LHQAVEARNLDVVKSLLT-R-GHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKC-SV--FYTLVAIKDAFNN 111 (477)
T ss_pred cch-HHHHHHcCCHHHHHHHHH-C-CCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcc-cc--ccchhhHHHHHHc
Confidence 344 999999999999999998 3 3567889999999999999999999999999986552 22 5678999999999
Q ss_pred CCHHHHHHHHhhCCccccccCCCCCcHHHHHHHc--CCHHHHHHHHcCCCccccccCCC-CCcHHHHHHHcCCHHHHHHH
Q 005931 85 GNHEVSAFLMEANPTVATKLNHESQSAFSLACRQ--GHLDVVKLLINQSWLMEFEEDSV-ESTPIYLAISRGHTDIAREI 161 (669)
Q Consensus 85 g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~--g~~eiv~~Ll~~~~~~~~~~~~~-~~t~L~~A~~~g~~~iv~~L 161 (669)
|+.+++++|+..+.......+ ...+..+... .+.+++++|++++.+.+. .+.. |.||||.|+..|+.++++.|
T Consensus 112 ~~~ei~~~Ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~iv~~Ll~~gadin~-~~~~~g~tpLh~A~~~~~~~iv~~L 187 (477)
T PHA02878 112 RNVEIFKIILTNRYKNIQTID---LVYIDKKSKDDIIEAEITKLLLSYGADINM-KDRHKGNTALHYATENKDQRLTELL 187 (477)
T ss_pred CCHHHHHHHHhCcccCcccCc---HHHHhhccchhhHHHHHHHHHHHcCCCCCc-cCCCCCCCHHHHHHhCCCHHHHHHH
Confidence 999999999987544322111 1111111112 234699999999998874 4444 99999999999999999999
Q ss_pred HhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHc-CCHHHHHHHHhcCCCCcccc
Q 005931 162 LEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAIN-GRVKILVAFLSSSPASFDRL 240 (669)
Q Consensus 162 l~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~-g~~e~v~~LL~~~~~~i~~~ 240 (669)
++.+.+. +..|..|.||||.|+..|+.+++++|++.|++++.. |..|.||||+|+.. ++.++++.|+.. +++++..
T Consensus 188 l~~gad~-n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~-d~~g~TpLh~A~~~~~~~~iv~~Ll~~-gadvn~~ 264 (477)
T PHA02878 188 LSYGANV-NIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDAR-DKCGNTPLHISVGYCKDYDILKLLLEH-GVDVNAK 264 (477)
T ss_pred HHCCCCC-CCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHhcCCHHHHHHHHHc-CCCCCcc
Confidence 9998875 778999999999999999999999999999999986 99999999999976 689998877765 5788888
Q ss_pred cC-CCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcC-CHHHHHHHHHh----cCcccccccCCCC
Q 005931 241 TT-YGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRK-NYQFVEYIIKE----TVLDIYCRNHKNQ 314 (669)
Q Consensus 241 d~-~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~-~~~iv~~Ll~~----~~~d~~~~n~~g~ 314 (669)
+. .|.||||+| .++.+++++|++. ++++|.+|.+|+||||+|+..+ ..+++++|+.+ ...+++.+|..|.
T Consensus 265 ~~~~g~TpLh~A--~~~~~~v~~Ll~~--gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~g~ 340 (477)
T PHA02878 265 SYILGLTALHSS--IKSERKLKLLLEY--GADINSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPDIKNSEGF 340 (477)
T ss_pred CCCCCCCHHHHH--ccCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCcccCcHHH
Confidence 75 899999999 5778999999996 7789999999999999999854 56777777743 3457777777777
Q ss_pred CHH
Q 005931 315 TAL 317 (669)
Q Consensus 315 T~L 317 (669)
++-
T Consensus 341 ~~n 343 (477)
T PHA02878 341 IDN 343 (477)
T ss_pred HHH
Confidence 653
No 21
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.7e-32 Score=296.07 Aligned_cols=243 Identities=22% Similarity=0.267 Sum_probs=174.3
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCC
Q 005931 41 NTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGH 120 (669)
Q Consensus 41 ~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~ 120 (669)
+++||.|+..|+.+++++|++.|.+ ++..+..|.||||+|+..|+.+++++|++.|++.... +..
T Consensus 3 ~~~L~~A~~~g~~~iv~~Ll~~g~~-~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~------------- 67 (413)
T PHA02875 3 QVALCDAILFGELDIARRLLDIGIN-PNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVK-YPD------------- 67 (413)
T ss_pred chHHHHHHHhCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc-CCC-------------
Confidence 4566666666666666666666555 4555555666666666666666666666655543221 233
Q ss_pred HHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCC
Q 005931 121 LDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNK 200 (669)
Q Consensus 121 ~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~ 200 (669)
+.||||.|+..|+.++++.|++.+.......+.+|.||||+|+..|+.+++++|+++|+
T Consensus 68 ---------------------~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~ga 126 (413)
T PHA02875 68 ---------------------IESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGA 126 (413)
T ss_pred ---------------------cccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 44555555555555555555555554444456678888888888888888888888888
Q ss_pred ccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCC
Q 005931 201 DLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGN 280 (669)
Q Consensus 201 ~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~ 280 (669)
+++.. +.+|.||||+|+..|+.++++.|+.. +.+++..|..|.||||+|+..|+.+++++|++. +.+++..+..|.
T Consensus 127 d~~~~-~~~g~tpLh~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~--ga~~n~~~~~~~ 202 (413)
T PHA02875 127 DPDIP-NTDKFSPLHLAVMMGDIKGIELLIDH-KACLDIEDCCGCTPLIIAMAKGDIAICKMLLDS--GANIDYFGKNGC 202 (413)
T ss_pred CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCcCCCCCC
Confidence 88765 77888888888888888887777755 467888888888999999999999999998886 567777777764
Q ss_pred -cHHHHHHHcCCHHHHHHHHHhcCcccccc---cCCCCCHHHHHHHcC
Q 005931 281 -TVLHLAVLRKNYQFVEYIIKETVLDIYCR---NHKNQTALDIIEQAG 324 (669)
Q Consensus 281 -TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~---n~~g~T~L~~a~~~~ 324 (669)
||+|+|+..++.+++++|+ +.|+|++.. +..+.||++++....
T Consensus 203 ~t~l~~A~~~~~~~iv~~Ll-~~gad~n~~~~~~~~~~t~l~~~~~~~ 249 (413)
T PHA02875 203 VAALCYAIENNKIDIVRLFI-KRGADCNIMFMIEGEECTILDMICNMC 249 (413)
T ss_pred chHHHHHHHcCCHHHHHHHH-HCCcCcchHhhcCCCchHHHHHHHhhc
Confidence 7888899999999999999 778888765 577889999876544
No 22
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=8e-33 Score=277.18 Aligned_cols=217 Identities=29% Similarity=0.421 Sum_probs=188.9
Q ss_pred HHHHHHhCCHHHHHHHHcCcch-hh--hcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccc--------cccCCCCCcH
Q 005931 9 LSEAIVRNDKQALINLVGCSNK-RI--LLQRDASLNTALHLAARFGHVELVTEITKLCPELV--------AAENEKLETP 77 (669)
Q Consensus 9 L~~Ai~~gd~~~l~~ll~~~~~-~~--l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~--------~~~n~~g~Tp 77 (669)
.++|++.|.+..+..++..... .+ +-..+.+|.|||-+||++||.++|++|++.+...+ +-.+..|-+|
T Consensus 8 ~~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~Iegapp 87 (615)
T KOG0508|consen 8 VINAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPP 87 (615)
T ss_pred HHHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCch
Confidence 4689999999999998873221 12 23337788899999999999999999999643212 2234578899
Q ss_pred HHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHH
Q 005931 78 LHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDI 157 (669)
Q Consensus 78 Lh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~i 157 (669)
|-.|+..||+++||.|+++|++++.. .....|||-.||.-|+.|+|++|++++++.+ ..+..|.|.|++|+..|+.++
T Consensus 88 LWaAsaAGHl~vVk~L~~~ga~VN~t-T~TNStPLraACfDG~leivKyLvE~gad~~-IanrhGhTcLmIa~ykGh~~I 165 (615)
T KOG0508|consen 88 LWAASAAGHLEVVKLLLRRGASVNDT-TRTNSTPLRAACFDGHLEIVKYLVEHGADPE-IANRHGHTCLMIACYKGHVDI 165 (615)
T ss_pred hhHHhccCcHHHHHHHHHhcCccccc-cccCCccHHHHHhcchhHHHHHHHHcCCCCc-ccccCCCeeEEeeeccCchHH
Confidence 99999999999999999999888765 6677799999999999999999999999987 678889999999999999999
Q ss_pred HHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHH
Q 005931 158 AREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFL 230 (669)
Q Consensus 158 v~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL 230 (669)
+++|++.+.+. +.++..|+|+||.|+..|+++++++|+++|+.+.. |..|.|||..|+..|+.+++..|+
T Consensus 166 ~qyLle~gADv-n~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~--d~~GmtPL~~Aa~tG~~~iVe~L~ 235 (615)
T KOG0508|consen 166 AQYLLEQGADV-NAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV--DGHGMTPLLLAAVTGHTDIVERLL 235 (615)
T ss_pred HHHHHHhCCCc-chhcccCchHHHhhhhcccHHHHHHHHhCCceeee--cCCCCchHHHHhhhcchHHHHHHh
Confidence 99999999986 78899999999999999999999999999998875 788999999999999999988887
No 23
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00 E-value=9.3e-32 Score=302.02 Aligned_cols=206 Identities=17% Similarity=0.148 Sum_probs=160.4
Q ss_pred HHHHHHHHcCcchhhhcccCCCCChHHHHHHHc---CCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHH----HH
Q 005931 18 KQALINLVGCSNKRILLQRDASLNTALHLAARF---GHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHE----VS 90 (669)
Q Consensus 18 ~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~---g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~e----iv 90 (669)
++.+++++. ++...+.+|.+|+||||+||.. |+.++|++|++.|++ ++..+..|.||||+|+..|+.+ ++
T Consensus 12 ~~~~~~l~~--~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~-v~~~~~~g~TpL~~Aa~~g~~~v~~~~~ 88 (661)
T PHA02917 12 LDELKQMLR--DRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTN-PLHKNWRQLTPLEEYTNSRHVKVNKDIA 88 (661)
T ss_pred HHHHHHHHh--ccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCC-ccccCCCCCCHHHHHHHcCChhHHHHHH
Confidence 567888886 3455688899999999998665 889999999999998 6788999999999999999854 55
Q ss_pred HHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHH--HcCCHHHHHHHHhcCCcc
Q 005931 91 AFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAI--SRGHTDIAREILEVRPRF 168 (669)
Q Consensus 91 k~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~--~~g~~~iv~~Ll~~~~~~ 168 (669)
+.|++.+..... + +..+++++|+.+++.++|++|++++.+.+ ..+..|.||||.|+ ..|+.+++++|++++.+.
T Consensus 89 ~~Ll~~~~~~n~--~-~~~~~~~~a~~~~~~e~vk~Ll~~Gadin-~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~v 164 (661)
T PHA02917 89 MALLEATGYSNI--N-DFNIFSYMKSKNVDVDLIKVLVEHGFDLS-VKCENHRSVIENYVMTDDPVPEIIDLFIENGCSV 164 (661)
T ss_pred HHHHhccCCCCC--C-CcchHHHHHhhcCCHHHHHHHHHcCCCCC-ccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCc
Confidence 777776433211 1 12367788888889999999999988877 56667889998543 467899999999988775
Q ss_pred cC--CCCCCC-----------ChHHHHHHh-----------cCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCH-
Q 005931 169 AG--KTDKNG-----------FSPLHYASS-----------IGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRV- 223 (669)
Q Consensus 169 ~~--~~d~~g-----------~t~Lh~Aa~-----------~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~- 223 (669)
.. ..+..| .||||+|+. .++.+++++|+++|++++.. |.+|.||||+|+.+|+.
T Consensus 165 n~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~-d~~G~TpLh~A~~~g~~~ 243 (661)
T PHA02917 165 LYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSI-DKNYCTALQYYIKSSHID 243 (661)
T ss_pred cccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccC-CCCCCcHHHHHHHcCCCc
Confidence 31 112233 599999875 45789999999999998876 88899999999998885
Q ss_pred -HHHHHHHh
Q 005931 224 -KILVAFLS 231 (669)
Q Consensus 224 -e~v~~LL~ 231 (669)
++++.|+.
T Consensus 244 ~eivk~Li~ 252 (661)
T PHA02917 244 IDIVKLLMK 252 (661)
T ss_pred HHHHHHHHh
Confidence 67777753
No 24
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=7.5e-32 Score=272.32 Aligned_cols=214 Identities=14% Similarity=0.109 Sum_probs=93.9
Q ss_pred CCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcC
Q 005931 51 GHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQ 130 (669)
Q Consensus 51 g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~ 130 (669)
++.+++++|++.++. ..|..|.||||+|+..|+.+++++|++.|++.... ++.||||+|+..|+.+++++|++.
T Consensus 10 ~~~~~~~~Lis~~a~---~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~---d~~TpLh~Aa~~g~~eiV~lLL~~ 83 (284)
T PHA02791 10 KSKQLKSFLSSKDAF---KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLL---ENEFPLHQAATLEDTKIVKILLFS 83 (284)
T ss_pred CHHHHHHHHHhCCCC---CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCC---CCCCHHHHHHHCCCHHHHHHHHHC
Confidence 445555555555442 34555566666666666666666666555543321 234555555555555555555544
Q ss_pred CCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCC-ChHHHHHHhcCCHHHHHHHHhcCCccccccCCC
Q 005931 131 SWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNG-FSPLHYASSIGNVNMTKLLLNHNKDLALQYNKD 209 (669)
Q Consensus 131 ~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g-~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~ 209 (669)
+.+.+ ..+..|.||||+|+..|+.++++.|++.+.+. +..+..| .||||+|+..|+.+++++|++++++... ...
T Consensus 84 Gadvn-~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadi-n~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d--~~~ 159 (284)
T PHA02791 84 GMDDS-QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAI 159 (284)
T ss_pred CCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccc--ccc
Confidence 44332 23333444444444444444444444444332 2223333 2444444444444444444444332110 012
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcH-HHHHHHcCCHHHHHHHHHhcCCCCCccCCC
Q 005931 210 GYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETV-FHLAVRFDKYNAFKFLAESFNTCLFHGQDQ 277 (669)
Q Consensus 210 g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~-Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~ 277 (669)
|.||||+|+.+|+.++++.|+.. +++++..|..|.|| ||+|+.+|+.+++++|++. ++++|.+|.
T Consensus 160 g~TpLh~Aa~~g~~eiv~lLL~~-gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~--Ga~in~~~~ 225 (284)
T PHA02791 160 LLSCIHITIKNGHVDMMILLLDY-MTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKY--DINIYSVNL 225 (284)
T ss_pred CccHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHC--CCCCccCcc
Confidence 34444444444444444333332 23344444444433 4444444444444444443 333344444
No 25
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.1e-31 Score=291.41 Aligned_cols=219 Identities=19% Similarity=0.230 Sum_probs=159.5
Q ss_pred HHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCC
Q 005931 7 QNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGN 86 (669)
Q Consensus 7 ~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~ 86 (669)
..|+.|+..|+.+.++.|++ . +...+.++..|.||||+|+..|+.+++++|++.|++ ++..+..+.||||.|+..|+
T Consensus 4 ~~L~~A~~~g~~~iv~~Ll~-~-g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~t~L~~A~~~g~ 80 (413)
T PHA02875 4 VALCDAILFGELDIARRLLD-I-GINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAI-PDVKYPDIESELHDAVEEGD 80 (413)
T ss_pred hHHHHHHHhCCHHHHHHHHH-C-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-ccccCCCcccHHHHHHHCCC
Confidence 35999999999999999998 3 345677788999999999999999999999999987 67778889999999999999
Q ss_pred HHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q 005931 87 HEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRP 166 (669)
Q Consensus 87 ~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~ 166 (669)
.+++++|++.|+......+..|.||||+|+..|+.+++++|++.+.+.+ ..+..|.||||.|+..|+.++++.|++.+.
T Consensus 81 ~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~-~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~ 159 (413)
T PHA02875 81 VKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPD-IPNTDKFSPLHLAVMMGDIKGIELLIDHKA 159 (413)
T ss_pred HHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence 9999999999987766656778888888888888888888888776654 344445666666666666666666666555
Q ss_pred cccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHH
Q 005931 167 RFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFL 230 (669)
Q Consensus 167 ~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL 230 (669)
+. +..|..|.||||+|+..|+.+++++|+++|++++...+..+.||+|+|+..|+.++++.|+
T Consensus 160 ~~-~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll 222 (413)
T PHA02875 160 CL-DIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFI 222 (413)
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHH
Confidence 43 4445556666666666666666666666655555441222234444455444444444443
No 26
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=1.5e-32 Score=310.57 Aligned_cols=318 Identities=27% Similarity=0.379 Sum_probs=190.9
Q ss_pred HHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHH
Q 005931 9 LSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHE 88 (669)
Q Consensus 9 L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~e 88 (669)
++.|+.++.++.++-++. .+..+..+|..|-||||.|+..|+.+++++++..+.. ++..+..|.||+|.||+.+..+
T Consensus 213 l~~a~~~nri~~~eLll~--~gadv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~-~~~~~vr~~tplh~AA~~~~~e 289 (1143)
T KOG4177|consen 213 LHIACKKNRIKVVELLLK--HGADVSAKDESGLTPLHVAAFMGHLDIVKLLLQHGAS-VNVSTVRGETPLHMAARAGQVE 289 (1143)
T ss_pred hhhhccccccceeeeeee--ccCcCCcccccCccHHHHHHhccchhHHHHHHhcccc-cCcccccccCcchhhhccchhh
Confidence 555555555555554444 2244455555555555555555555555555555544 4445555555555555555555
Q ss_pred HHHHHHhhCCccccc--------------------------------cCCCCCcHHHHHHHcCCHHHHHHHHcCCCcccc
Q 005931 89 VSAFLMEANPTVATK--------------------------------LNHESQSAFSLACRQGHLDVVKLLINQSWLMEF 136 (669)
Q Consensus 89 ivk~Ll~~~~~~~~~--------------------------------~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~ 136 (669)
++++|+++|.++... .+..|.+|+|+++..++.++..+|...+....
T Consensus 290 ~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~- 368 (1143)
T KOG4177|consen 290 VCKLLLQNGADVLAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRR- 368 (1143)
T ss_pred hHhhhhccCcccccccccccChhhhhcccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhccccccC-
Confidence 555555554443222 12223333333333333332222222222111
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcc--------------------------------cCCCCCCCChHHHHHH
Q 005931 137 EEDSVESTPIYLAISRGHTDIAREILEVRPRF--------------------------------AGKTDKNGFSPLHYAS 184 (669)
Q Consensus 137 ~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~--------------------------------~~~~d~~g~t~Lh~Aa 184 (669)
..+..+.+|+|.|+..|..+.++.++..+... .+..+..|.||+|.|+
T Consensus 369 ~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa 448 (1143)
T KOG4177|consen 369 QAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAA 448 (1143)
T ss_pred cccccCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhh
Confidence 12222344444444444444444444433321 1334555566666666
Q ss_pred hcC-CHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcC------------------------------
Q 005931 185 SIG-NVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSS------------------------------ 233 (669)
Q Consensus 185 ~~g-~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~------------------------------ 233 (669)
..| ..+....+++.+.+++.. ...|.||||+|+..|+.+++..+++..
T Consensus 449 ~~g~~~~~~~~l~~~g~~~n~~-s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~ 527 (1143)
T KOG4177|consen 449 KKGRYLQIARLLLQYGADPNAV-SKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILL 527 (1143)
T ss_pred hcccHhhhhhhHhhcCCCcchh-ccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHh
Confidence 666 556666666666666654 566777777777777766655555322
Q ss_pred --CCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccC
Q 005931 234 --PASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNH 311 (669)
Q Consensus 234 --~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~ 311 (669)
+..++.++..|.||||.|+.+|+.++|++|+++ +.+++.+|+.|+||||.|+..|+.+|+++|+ +.|+++|+.|.
T Consensus 528 ~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~--gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLl-k~GA~vna~d~ 604 (1143)
T KOG4177|consen 528 EHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEH--GADVNAKDKLGYTPLHQAAQQGHNDIAELLL-KHGASVNAADL 604 (1143)
T ss_pred hcCCceehhcccccchHHHHHhcCCchHHHHhhhC--CccccccCCCCCChhhHHHHcChHHHHHHHH-HcCCCCCcccc
Confidence 345667788888999999999999999999986 7788889999999999999999999999998 78889999999
Q ss_pred CCCCHHHHHHHcCCCchHHHHHH
Q 005931 312 KNQTALDIIEQAGTNDDATSLKK 334 (669)
Q Consensus 312 ~g~T~L~~a~~~~~~~~~~~l~~ 334 (669)
+|.|||++|...++.+....++.
T Consensus 605 ~g~TpL~iA~~lg~~~~~k~l~~ 627 (1143)
T KOG4177|consen 605 DGFTPLHIAVRLGYLSVVKLLKV 627 (1143)
T ss_pred cCcchhHHHHHhcccchhhHHHh
Confidence 99999999999888776655543
No 27
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=9.4e-32 Score=271.61 Aligned_cols=222 Identities=22% Similarity=0.282 Sum_probs=196.4
Q ss_pred cCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 005931 84 QGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILE 163 (669)
Q Consensus 84 ~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~ 163 (669)
.++.+++++|+++++. ..|..|.||||+|+..|+.+++++|++.+.+.+. . .+.||||.|+..|+.++++.|++
T Consensus 9 ~~~~~~~~~Lis~~a~---~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~-~--d~~TpLh~Aa~~g~~eiV~lLL~ 82 (284)
T PHA02791 9 WKSKQLKSFLSSKDAF---KADVHGHSALYYAIADNNVRLVCTLLNAGALKNL-L--ENEFPLHQAATLEDTKIVKILLF 82 (284)
T ss_pred cCHHHHHHHHHhCCCC---CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcC-C--CCCCHHHHHHHCCCHHHHHHHHH
Confidence 5788999999999875 3588999999999999999999999999877653 2 36899999999999999999999
Q ss_pred cCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-ChHHHHHHHcCCHHHHHHHHhcCCCCcccccC
Q 005931 164 VRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDG-YTPLHLAAINGRVKILVAFLSSSPASFDRLTT 242 (669)
Q Consensus 164 ~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g-~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~ 242 (669)
.+.+. +..|..|.||||+|+..|+.+++++|+++|++++.. +..| .||||+|+..|+.++++.|+...+...+. .
T Consensus 83 ~Gadv-n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~-~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~--~ 158 (284)
T PHA02791 83 SGMDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFY-GKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL--A 158 (284)
T ss_pred CCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc-CCCCCcHHHHHHHHcCCHHHHHHHHhcCCccccc--c
Confidence 88775 678999999999999999999999999999999875 6666 58999999999999999999876533221 3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcH-HHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHH
Q 005931 243 YGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTV-LHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDI 319 (669)
Q Consensus 243 ~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~Tp-Lh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~ 319 (669)
.|.||||+|+++|+.+++++|++. +++++.+|..|.|| ||+|+..|+.+++++|+ +.|+|++.+|..| |+|+.
T Consensus 159 ~g~TpLh~Aa~~g~~eiv~lLL~~--gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl-~~Ga~in~~~~~~-~~l~~ 232 (284)
T PHA02791 159 ILLSCIHITIKNGHVDMMILLLDY--MTSTNTNNSLLFIPDIKLAIDNKDLEMLQALF-KYDINIYSVNLEN-VLLDD 232 (284)
T ss_pred cCccHHHHHHHcCCHHHHHHHHHC--CCCCCcccCCCCChHHHHHHHcCCHHHHHHHH-HCCCCCccCcccC-ccCCC
Confidence 589999999999999999999997 66889999999987 99999999999999999 7789999999955 77743
No 28
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00 E-value=2.9e-31 Score=290.04 Aligned_cols=327 Identities=15% Similarity=0.115 Sum_probs=255.4
Q ss_pred ccCHHHHHHHHhC--CHHHHHHHHcCcchhhhcccCCCCChHHHHHHH--cCCHHHHHHHHHhC-CccccccC-----CC
Q 005931 4 GMAQNLSEAIVRN--DKQALINLVGCSNKRILLQRDASLNTALHLAAR--FGHVELVTEITKLC-PELVAAEN-----EK 73 (669)
Q Consensus 4 ~m~~~L~~Ai~~g--d~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~--~g~~e~vk~Ll~~~-~~~~~~~n-----~~ 73 (669)
|.+| ||.|+..| +.++++.|++.......+..+..+++|||.++. +++.++|++|++.+ .+ ++..+ ..
T Consensus 77 G~TP-Lh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~-~~~~~~~~~~~~ 154 (672)
T PHA02730 77 GLTP-LGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIR-PSKNTNYYIHCL 154 (672)
T ss_pred CCCh-HHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCC-hhhhhhhhcccc
Confidence 5677 99999977 799999999844334445678889999999999 99999999999744 34 33332 37
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCccc------cccCCCC-CcHHHHH------HHcCCHHHHHHHHcCCCccccccCC
Q 005931 74 LETPLHEACCQGNHEVSAFLMEANPTVA------TKLNHES-QSAFSLA------CRQGHLDVVKLLINQSWLMEFEEDS 140 (669)
Q Consensus 74 g~TpLh~Aa~~g~~eivk~Ll~~~~~~~------~~~~~~g-~tpL~~A------~~~g~~eiv~~Ll~~~~~~~~~~~~ 140 (669)
|.+|+++|+..++.|+|++|+++|+++. ...+... .|.||++ ..+++.|++++|+++|++.+ ..+.
T Consensus 155 ~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN-~kd~ 233 (672)
T PHA02730 155 GLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIH-GRDE 233 (672)
T ss_pred chhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCC-CCCC
Confidence 8999999999999999999999999984 1123333 4555533 35678999999999999887 6788
Q ss_pred CCCcHHHH--HHHcCCHHHHHHHHh--------------------------------cCCcccCC---------------
Q 005931 141 VESTPIYL--AISRGHTDIAREILE--------------------------------VRPRFAGK--------------- 171 (669)
Q Consensus 141 ~~~t~L~~--A~~~g~~~iv~~Ll~--------------------------------~~~~~~~~--------------- 171 (669)
.|.||||+ +...++.|+++.|++ ++.+. ..
T Consensus 234 ~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~i~~~~~~~~~~~~~~~ 312 (672)
T PHA02730 234 GGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDM-EIVNLLIEGRHTLIDVM 312 (672)
T ss_pred CCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcch-HHHHHHhhccCcchhhh
Confidence 89999995 555677999999998 33322 11
Q ss_pred -----CCCCCCh---------------------HHHHHHhcC---CHHHHHHHHhcCCccccccCCCCChHHHHHHHcCC
Q 005931 172 -----TDKNGFS---------------------PLHYASSIG---NVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGR 222 (669)
Q Consensus 172 -----~d~~g~t---------------------~Lh~Aa~~g---~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~ 222 (669)
.+..|.+ .||.-.+.+ +.+++++|+++|++++. +..|.||||+|+..++
T Consensus 313 ~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~--k~~G~TpLH~Aa~~nn 390 (672)
T PHA02730 313 RSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDK--TTDNNYPLHDYFVNNN 390 (672)
T ss_pred hccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCc--CCCCCcHHHHHHHHcC
Confidence 3455543 566666644 68999999999999996 3789999999998875
Q ss_pred ----HHHHHHHHhcCC-CCcccccCCCCcHHHH---HHHcC---------CHHHHHHHHHhcCCCCCccCCCCCCcHHHH
Q 005931 223 ----VKILVAFLSSSP-ASFDRLTTYGETVFHL---AVRFD---------KYNAFKFLAESFNTCLFHGQDQFGNTVLHL 285 (669)
Q Consensus 223 ----~e~v~~LL~~~~-~~i~~~d~~g~t~Lh~---Av~~~---------~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~ 285 (669)
.++++.|++.++ .+++..|..|+||||. |...+ ..+++++|+.. ++++|.+|..|+||||+
T Consensus 391 n~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~--GADINakD~~G~TPLh~ 468 (672)
T PHA02730 391 NIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKY--MDDIDMIDNENKTLLYY 468 (672)
T ss_pred CcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhc--ccchhccCCCCCCHHHH
Confidence 899999998765 4789999999999994 33332 23579999986 77899999999999999
Q ss_pred HHHcCCHHHHHHHHHhcCcccccccC-CCCCHHHHHHHcCCCchHHHHHHHHHHhCC
Q 005931 286 AVLRKNYQFVEYIIKETVLDIYCRNH-KNQTALDIIEQAGTNDDATSLKKLFKTAGN 341 (669)
Q Consensus 286 A~~~~~~~iv~~Ll~~~~~d~~~~n~-~g~T~L~~a~~~~~~~~~~~l~~~l~~~~~ 341 (669)
|+..++.+++++|+ +.|++++.+|. .|.|||+.|...... ...+.++|...|+
T Consensus 469 Aa~~~~~eive~LI-~~GAdIN~~d~~~g~TaL~~Aa~~~~~--~~eIv~~LLs~ga 522 (672)
T PHA02730 469 AVDVNNIQFARRLL-EYGASVNTTSRSIINTAIQKSSYRREN--KTKLVDLLLSYHP 522 (672)
T ss_pred HHHhCCHHHHHHHH-HCCCCCCCCCCcCCcCHHHHHHHhhcC--cHHHHHHHHHcCC
Confidence 99999999999999 77899999997 599999999864211 2445566666653
No 29
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00 E-value=4.2e-31 Score=292.14 Aligned_cols=290 Identities=15% Similarity=0.169 Sum_probs=239.5
Q ss_pred HHHHHHhCC---HHHHHHHHcCcchhhhcccCCCCChHHHHHHH--cCCHHHHHHHHHhCCccccccCCCCCcHHHHHHH
Q 005931 9 LSEAIVRND---KQALINLVGCSNKRILLQRDASLNTALHLAAR--FGHVELVTEITKLCPELVAAENEKLETPLHEACC 83 (669)
Q Consensus 9 L~~Ai~~gd---~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~--~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~ 83 (669)
||.-+...+ ++.++.+++..+ .+.. ..+.|+++.+.. .++.++|++|++.|++ ++..|..|.||||.|+.
T Consensus 6 l~~y~~~~~~~~~~~v~~ll~~~~---~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~TpL~~~~~ 80 (489)
T PHA02798 6 LYNYITFSDNVKLSTVKLLIKSCN---PNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGAN-VNGLDNEYSTPLCTILS 80 (489)
T ss_pred hHHHeeecCcccHHHHHHHHhcCC---hhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCC-CCCCCCCCCChHHHHHH
Confidence 777766554 778899998322 1222 446677764444 4589999999999998 88999999999999986
Q ss_pred c-----CCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcC---CHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCC-
Q 005931 84 Q-----GNHEVSAFLMEANPTVATKLNHESQSAFSLACRQG---HLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGH- 154 (669)
Q Consensus 84 ~-----g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g---~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~- 154 (669)
. ++.+++++|+++|++++.. +..|.||||+|+..+ +.+++++|+++|++.+ ..+..|.||||.|+..++
T Consensus 81 n~~~~~~~~~iv~~Ll~~GadiN~~-d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn-~~d~~g~tpL~~a~~~~~~ 158 (489)
T PHA02798 81 NIKDYKHMLDIVKILIENGADINKK-NSDGETPLYCLLSNGYINNLEILLFMIENGADTT-LLDKDGFTMLQVYLQSNHH 158 (489)
T ss_pred hHHhHHhHHHHHHHHHHCCCCCCCC-CCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcc-ccCCCCCcHHHHHHHcCCc
Confidence 4 6799999999999998765 889999999999986 7899999999999886 677889999999999988
Q ss_pred --HHHHHHHHhcCCcccCCCCCCCChHHHHHHhc----CCHHHHHHHHhcCCccccccCCCCChHHH-------HHHHcC
Q 005931 155 --TDIAREILEVRPRFAGKTDKNGFSPLHYASSI----GNVNMTKLLLNHNKDLALQYNKDGYTPLH-------LAAING 221 (669)
Q Consensus 155 --~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~----g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh-------~Aa~~g 221 (669)
.++++.|++.+.+.....+..|.||||.++.. ++.+++++|+++|++++.. +..|.++++ .+...+
T Consensus 159 ~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~-~~~~~~~~~~~l~~l~~~~~~~ 237 (489)
T PHA02798 159 IDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKE-NKSHKKKFMEYLNSLLYDNKRF 237 (489)
T ss_pred chHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccC-CccccchHHHHHHHHHhhcccc
Confidence 99999999999886444456789999988764 5799999999999999875 777788766 234556
Q ss_pred CHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHh
Q 005931 222 RVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKE 301 (669)
Q Consensus 222 ~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~ 301 (669)
+.+++..++. + .+++.+|..|+||||+|+.+++.+++++|++. ++++|.+|..|+||||+|+..++.++++.|+ +
T Consensus 238 ~~~i~~~l~~-~-~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~--GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL-~ 312 (489)
T PHA02798 238 KKNILDFIFS-Y-IDINQVDELGFNPLYYSVSHNNRKIFEYLLQL--GGDINIITELGNTCLFTAFENESKFIFNSIL-N 312 (489)
T ss_pred hHHHHHHHHh-c-CCCCCcCcCCccHHHHHHHcCcHHHHHHHHHc--CCcccccCCCCCcHHHHHHHcCcHHHHHHHH-c
Confidence 6777666554 3 78999999999999999999999999999996 7789999999999999999999999999999 6
Q ss_pred cCcccccccC
Q 005931 302 TVLDIYCRNH 311 (669)
Q Consensus 302 ~~~d~~~~n~ 311 (669)
.+.+++..+.
T Consensus 313 ~~~~~~~i~~ 322 (489)
T PHA02798 313 KKPNKNTISY 322 (489)
T ss_pred cCCCHHHHHH
Confidence 6667765443
No 30
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.98 E-value=3.3e-32 Score=307.74 Aligned_cols=331 Identities=26% Similarity=0.338 Sum_probs=266.4
Q ss_pred HHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHH
Q 005931 9 LSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHE 88 (669)
Q Consensus 9 L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~e 88 (669)
++.+...++.+.++.+++ . ....+..+.+|.||||+||..+..++++.++..+.+ +...|..|.||||.|+..|+.+
T Consensus 180 ~~~~~~~~~~~~~~ll~~-~-~~~~~a~~~~~~tpl~~a~~~nri~~~eLll~~gad-v~a~d~~gl~~lh~a~~~g~~~ 256 (1143)
T KOG4177|consen 180 LHVAAHCGHARVAKLLLD-K-KADPNASALNGFTPLHIACKKNRIKVVELLLKHGAD-VSAKDESGLTPLHVAAFMGHLD 256 (1143)
T ss_pred hhHHhhcchHHHHhhhhc-c-cCCccccccCCCCchhhhccccccceeeeeeeccCc-CCcccccCccHHHHHHhccchh
Confidence 467777888888887777 2 355678899999999999999999999999999998 8999999999999999999999
Q ss_pred HHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCC----------------------------
Q 005931 89 VSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDS---------------------------- 140 (669)
Q Consensus 89 ivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~---------------------------- 140 (669)
++.+|+.+|+..... +..|+||+|+|+..+..++.++|++++.+.. ..+.
T Consensus 257 i~~~l~~~ga~~~~~-~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~-~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~ 334 (1143)
T KOG4177|consen 257 IVKLLLQHGASVNVS-TVRGETPLHMAARAGQVEVCKLLLQNGADVL-AKARDDQTPLHIASRLGHEEIVHLLLQAGATP 334 (1143)
T ss_pred HHHHHHhcccccCcc-cccccCcchhhhccchhhhHhhhhccCcccc-cccccccChhhhhcccchHHHHHHHhhccCCc
Confidence 999999999998766 9999999999999999999999999986654 2222
Q ss_pred -----CCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccc----------
Q 005931 141 -----VESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQ---------- 205 (669)
Q Consensus 141 -----~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~---------- 205 (669)
.+.+|+|+++..++.++...+....+.- ...+..|.+|+|.|+..|..+++++++..|++++..
T Consensus 335 ~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~-~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~ 413 (1143)
T KOG4177|consen 335 NAARTAGYTPLHLAAKEGQVEVAGALLEHGAQR-RQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHV 413 (1143)
T ss_pred cccCcCCcccccHhhhhhhHHHHHHhhcccccc-CcccccCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeee
Confidence 3445555555555555554444444443 344667788888888888888888888888765543
Q ss_pred ----------------------cCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHH
Q 005931 206 ----------------------YNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFL 263 (669)
Q Consensus 206 ----------------------~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~L 263 (669)
.+..|+||+|+|+..|.......++...+.+++.....|.||||+|+..|+.+++..|
T Consensus 414 aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~ll 493 (1143)
T KOG4177|consen 414 AAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLL 493 (1143)
T ss_pred hhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHh
Confidence 2345788889888888433345666677889999999999999999999999999999
Q ss_pred HHhc-------------------------------CCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCC
Q 005931 264 AESF-------------------------------NTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHK 312 (669)
Q Consensus 264 l~~~-------------------------------~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~ 312 (669)
++.. .+..++.++..|+||||.|+.+|+.++|++|| +.|+|++++++.
T Consensus 494 le~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLL-e~gAdv~ak~~~ 572 (1143)
T KOG4177|consen 494 LEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLL-EHGADVNAKDKL 572 (1143)
T ss_pred hhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhh-hCCccccccCCC
Confidence 8732 13456677899999999999999999999999 889999999999
Q ss_pred CCCHHHHHHHcCCCchHHHHHHHHHHhCCCCCCCCCCc
Q 005931 313 NQTALDIIEQAGTNDDATSLKKLFKTAGNIGSPELSPP 350 (669)
Q Consensus 313 g~T~L~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 350 (669)
|+||||.|+..|+.+ +..+|.+.|+..+-...+.
T Consensus 573 G~TPLH~Aa~~G~~~----i~~LLlk~GA~vna~d~~g 606 (1143)
T KOG4177|consen 573 GYTPLHQAAQQGHND----IAELLLKHGASVNAADLDG 606 (1143)
T ss_pred CCChhhHHHHcChHH----HHHHHHHcCCCCCcccccC
Confidence 999999999999554 4566677777665444333
No 31
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.4e-31 Score=236.44 Aligned_cols=200 Identities=27% Similarity=0.391 Sum_probs=95.8
Q ss_pred HHHHHhCCHHHHHHHHcCcchhhhccc-CCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHH
Q 005931 10 SEAIVRNDKQALINLVGCSNKRILLQR-DASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHE 88 (669)
Q Consensus 10 ~~Ai~~gd~~~l~~ll~~~~~~~l~~~-d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~e 88 (669)
..+.......-++++++ ..+..++.+ |.+|+||||+||..|+.++|++|+....-.++.+|..|+||||.||..|+.|
T Consensus 8 ~~~~~~~~~~kveel~~-s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~e 86 (226)
T KOG4412|consen 8 KAICENCEEFKVEELIQ-SDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDE 86 (226)
T ss_pred HHHHhhchHHHHHHHHh-cChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHH
Confidence 33444444445555555 333333333 3355555555555555555555554222224444555555555555555555
Q ss_pred HHHHHHhh-CCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCc
Q 005931 89 VSAFLMEA-NPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPR 167 (669)
Q Consensus 89 ivk~Ll~~-~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~ 167 (669)
+|+.|+.+ |++++.. +..|.|+||+|+..|..+++++|++++..+. ..|..|.||||-|+.-|..+++++|+..+..
T Consensus 87 vVk~Ll~r~~advna~-tn~G~T~LHyAagK~r~eIaqlLle~ga~i~-~kD~~~qtplHRAAavGklkvie~Li~~~a~ 164 (226)
T KOG4412|consen 87 VVKELLNRSGADVNAT-TNGGQTCLHYAAGKGRLEIAQLLLEKGALIR-IKDKQGQTPLHRAAAVGKLKVIEYLISQGAP 164 (226)
T ss_pred HHHHHhcCCCCCccee-cCCCcceehhhhcCChhhHHHHHHhcCCCCc-ccccccCchhHHHHhccchhhHHHHHhcCCC
Confidence 55555555 4444333 4455555555555555555555555544333 3444444444444444444444444444433
Q ss_pred ccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHH
Q 005931 168 FAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLH 215 (669)
Q Consensus 168 ~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh 215 (669)
. +..|..|+||||.|...|+.++..+|+++|++.... |++| ||+.
T Consensus 165 ~-n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~e-dke~-t~~~ 209 (226)
T KOG4412|consen 165 L-NTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDRE-DKEG-TALR 209 (226)
T ss_pred C-CcccccCccHHHHHHhccCchHHHHHHHhccceeec-cccC-chHH
Confidence 2 444444444444444444444444444444444433 4444 4433
No 32
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.8e-31 Score=235.79 Aligned_cols=206 Identities=28% Similarity=0.322 Sum_probs=155.0
Q ss_pred cHHHHHHHcCCHHHHHHHHcCCC-ccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCC
Q 005931 110 SAFSLACRQGHLDVVKLLINQSW-LMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGN 188 (669)
Q Consensus 110 tpL~~A~~~g~~eiv~~Ll~~~~-~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~ 188 (669)
++.+.+|......-++-+++... ..+...+.+|+||||+||+.|+.+++.+|+......++..|..||||||.||+.|+
T Consensus 5 ~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~ 84 (226)
T KOG4412|consen 5 SLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGN 84 (226)
T ss_pred chHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCc
Confidence 44445555544444554544433 23333344566777777777777777777754444456668888888888888888
Q ss_pred HHHHHHHHhc-CCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 005931 189 VNMTKLLLNH-NKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESF 267 (669)
Q Consensus 189 ~eiv~~Ll~~-g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~ 267 (669)
.++|+.|+.+ |++++.. ++.|.|+||+|+.+|+.++.+.|+..+ +.++.+|..|.||||-|+.-|+.+++++|+..
T Consensus 85 ~evVk~Ll~r~~advna~-tn~G~T~LHyAagK~r~eIaqlLle~g-a~i~~kD~~~qtplHRAAavGklkvie~Li~~- 161 (226)
T KOG4412|consen 85 DEVVKELLNRSGADVNAT-TNGGQTCLHYAAGKGRLEIAQLLLEKG-ALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQ- 161 (226)
T ss_pred HHHHHHHhcCCCCCccee-cCCCcceehhhhcCChhhHHHHHHhcC-CCCcccccccCchhHHHHhccchhhHHHHHhc-
Confidence 8888888888 8888876 888888888888888888876666555 88888888888899988888888899988876
Q ss_pred CCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHH
Q 005931 268 NTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIE 321 (669)
Q Consensus 268 ~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~ 321 (669)
+..+|.+|..|+||||.|...++.++..+|+ ..|+|++..|+.| ||+.++.
T Consensus 162 -~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV-~~gAd~~~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 162 -GAPLNTQDKYGFTPLHHALAEGHPDVAVLLV-RAGADTDREDKEG-TALRIAC 212 (226)
T ss_pred -CCCCCcccccCccHHHHHHhccCchHHHHHH-HhccceeeccccC-chHHHHH
Confidence 5678888999999999997778888888888 5568999999988 8887764
No 33
>PHA02798 ankyrin-like protein; Provisional
Probab=99.97 E-value=4.2e-30 Score=284.18 Aligned_cols=269 Identities=20% Similarity=0.223 Sum_probs=228.4
Q ss_pred CHHHHHHHHHhCCccccccCCCCCcHHHHHH--HcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHc-----CCHHHH
Q 005931 52 HVELVTEITKLCPELVAAENEKLETPLHEAC--CQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQ-----GHLDVV 124 (669)
Q Consensus 52 ~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa--~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~-----g~~eiv 124 (669)
..+.|+.|++.+.. .+. ..|.|+++.+. ..++.++|++|+++|++++.. +..|.||||.|+.+ ++.+++
T Consensus 17 ~~~~v~~ll~~~~~-~~~--~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~-d~~g~TpL~~~~~n~~~~~~~~~iv 92 (489)
T PHA02798 17 KLSTVKLLIKSCNP-NEI--VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGL-DNEYSTPLCTILSNIKDYKHMLDIV 92 (489)
T ss_pred cHHHHHHHHhcCCh-hhh--cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCC-CCCCCChHHHHHHhHHhHHhHHHHH
Confidence 47899999987532 222 45778776444 345899999999999998765 89999999999865 678999
Q ss_pred HHHHcCCCccccccCCCCCcHHHHHHHcC---CHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCC---HHHHHHHHhc
Q 005931 125 KLLINQSWLMEFEEDSVESTPIYLAISRG---HTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGN---VNMTKLLLNH 198 (669)
Q Consensus 125 ~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g---~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~---~eiv~~Ll~~ 198 (669)
++|+++|++.+ ..+..|.||||+|+..+ +.+++++|++.+.+. +..|.+|.||||+|+..|+ .+++++|+++
T Consensus 93 ~~Ll~~GadiN-~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~ 170 (489)
T PHA02798 93 KILIENGADIN-KKNSDGETPLYCLLSNGYINNLEILLFMIENGADT-TLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEK 170 (489)
T ss_pred HHHHHCCCCCC-CCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHcCCcchHHHHHHHHHh
Confidence 99999999887 56778999999999876 789999999999885 7889999999999999988 9999999999
Q ss_pred CCccccccCCCCChHHHHHHHc----CCHHHHHHHHhcCCCCcccccCCCCcHHH-------HHHHcCCHHHHHHHHHhc
Q 005931 199 NKDLALQYNKDGYTPLHLAAIN----GRVKILVAFLSSSPASFDRLTTYGETVFH-------LAVRFDKYNAFKFLAESF 267 (669)
Q Consensus 199 g~~~~~~~~~~g~tpLh~Aa~~----g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh-------~Av~~~~~~iv~~Ll~~~ 267 (669)
|++++...+..|.||||.++.. ++.++++.|++. |.+++..+..|+++++ .+...+..+++++|+.
T Consensus 171 gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~-Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-- 247 (489)
T PHA02798 171 GVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDN-GFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-- 247 (489)
T ss_pred CCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHC-CCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh--
Confidence 9999887567899999998764 478988888765 4788888888999877 2445677889998876
Q ss_pred CCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHHcCCCchHHH
Q 005931 268 NTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQAGTNDDATS 331 (669)
Q Consensus 268 ~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~~~~~~~~ 331 (669)
+.++|.+|..|+||||+|+..++.+++++|+ +.|+|++.+|..|+|||++|...++.+....
T Consensus 248 -~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL-~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~ 309 (489)
T PHA02798 248 -YIDINQVDELGFNPLYYSVSHNNRKIFEYLL-QLGGDINIITELGNTCLFTAFENESKFIFNS 309 (489)
T ss_pred -cCCCCCcCcCCccHHHHHHHcCcHHHHHHHH-HcCCcccccCCCCCcHHHHHHHcCcHHHHHH
Confidence 4789999999999999999999999999999 7889999999999999999999887554433
No 34
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.96 E-value=6.1e-29 Score=260.66 Aligned_cols=208 Identities=27% Similarity=0.332 Sum_probs=176.9
Q ss_pred cHHHHHHHcCCHHHHHHHHcC-CCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCC
Q 005931 110 SAFSLACRQGHLDVVKLLINQ-SWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGN 188 (669)
Q Consensus 110 tpL~~A~~~g~~eiv~~Ll~~-~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~ 188 (669)
.-++.|++.|..+.|+.|++. +.+.+ ..|..|.|+||+|+.+++.+++++|++++.+....-..-+.||||+|+++|+
T Consensus 46 ~~~v~A~q~G~l~~v~~lve~~g~~v~-~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~ 124 (600)
T KOG0509|consen 46 DDIVKATQYGELETVKELVESEGESVN-NPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGH 124 (600)
T ss_pred hhhhhHhhcchHHHHHHHHhhcCcCCC-CCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCc
Confidence 445667777777777777766 44443 5556677788888888888888888888777644433668899999999999
Q ss_pred HHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcC
Q 005931 189 VNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFN 268 (669)
Q Consensus 189 ~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~ 268 (669)
+.+|.+|+++|++++.. |.+|.+|+|+|+..|+.-++.++|.+. .+++.+|.+|+||||+|+.++....+..|++.
T Consensus 125 ~~vv~lLlqhGAdpt~~-D~~G~~~lHla~~~~~~~~vayll~~~-~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f-- 200 (600)
T KOG0509|consen 125 ISVVDLLLQHGADPTLK-DKQGLTPLHLAAQFGHTALVAYLLSKG-ADIDLRDNNGRTPLMWAAYKGFALFVRRLLKF-- 200 (600)
T ss_pred HHHHHHHHHcCCCCcee-cCCCCcHHHHHHHhCchHHHHHHHHhc-ccCCCcCCCCCCHHHHHHHhcccHHHHHHHHh--
Confidence 99999999999999987 999999999999999999999999887 89999999999999999999998888888886
Q ss_pred CCCCccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHHc
Q 005931 269 TCLFHGQD-QFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQA 323 (669)
Q Consensus 269 ~~~in~~D-~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~ 323 (669)
+..++..| ++|+||||+|+..|+..++. |+.++|++.+.+|.+|.||+++|.+.
T Consensus 201 ~a~~~~~d~~~g~TpLHwa~~~gN~~~v~-Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 201 GASLLLTDDNHGNTPLHWAVVGGNLTAVK-LLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred cccccccccccCCchHHHHHhcCCcceEe-hhhhcCCcccccccCCCCHHHHHHHh
Confidence 55666666 99999999999999999999 66699999999999999999999776
No 35
>PHA02792 ankyrin-like protein; Provisional
Probab=99.96 E-value=1.6e-27 Score=257.89 Aligned_cols=279 Identities=14% Similarity=0.119 Sum_probs=197.8
Q ss_pred ccCCCCChHHHH-HHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHH-cCCHHHHHHHHhhCCcccc----------
Q 005931 35 QRDASLNTALHL-AARFGHVELVTEITKLCPELVAAENEKLETPLHEACC-QGNHEVSAFLMEANPTVAT---------- 102 (669)
Q Consensus 35 ~~d~~g~T~Lh~-Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~-~g~~eivk~Ll~~~~~~~~---------- 102 (669)
..+-+|.+++|+ |+..|+.|+|++|+++|++ ++.++..|.||+|+|+. .|+.|++++|++.|++...
T Consensus 66 ~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAd-vN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~ 144 (631)
T PHA02792 66 YKNINDFDIFEYLCSDNIDIELLKLLISKGLE-INSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIII 144 (631)
T ss_pred cCccCCccHHHHHHHhcccHHHHHHHHHcCCC-cccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhh
Confidence 345555666665 4446677777777777776 56666667777777754 5777777777777764210
Q ss_pred -------------------------ccCCCCCcHHHHHHHcC-------CHHHHHHHHcCCCccccccCCCCCcHHHHHH
Q 005931 103 -------------------------KLNHESQSAFSLACRQG-------HLDVVKLLINQSWLMEFEEDSVESTPIYLAI 150 (669)
Q Consensus 103 -------------------------~~~~~g~tpL~~A~~~g-------~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~ 150 (669)
..+..|.||||+|+.++ +.|+++.|++++.... ..+..|.||||+|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~-~~d~~g~t~l~~~~ 223 (631)
T PHA02792 145 EQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMR-YYTYREHTTLYYYV 223 (631)
T ss_pred hhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcC-ccCCCCChHHHHHH
Confidence 12345777777777777 6777777777776655 44555777777777
Q ss_pred HcC--CHHHHHHHHhcCCcccC------------------CCCC-------CCCh-------------------------
Q 005931 151 SRG--HTDIAREILEVRPRFAG------------------KTDK-------NGFS------------------------- 178 (669)
Q Consensus 151 ~~g--~~~iv~~Ll~~~~~~~~------------------~~d~-------~g~t------------------------- 178 (669)
.+. ..|+++.|++....... ..|. .|.+
T Consensus 224 ~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 303 (631)
T PHA02792 224 DKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYT 303 (631)
T ss_pred HcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHh
Confidence 777 66666666653110000 0000 0111
Q ss_pred -----HHHHHHhcC--CHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCC--CcHHH
Q 005931 179 -----PLHYASSIG--NVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYG--ETVFH 249 (669)
Q Consensus 179 -----~Lh~Aa~~g--~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g--~t~Lh 249 (669)
.||.-.+.+ +.+++++|+++|++.. ......+++.|+.+|+.++++.|++. |++++..|.+| .||||
T Consensus 304 ~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~---r~~~~n~~~~Aa~~gn~eIVelLIs~-GADIN~kD~~g~~~TpLh 379 (631)
T PHA02792 304 DSIQDLLSEYVSYHTVYINVIKCMIDEGATLY---RFKHINKYFQKFDNRDPKVVEYILKN-GNVVVEDDDNIINIMPLF 379 (631)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHCCCccc---cCCcchHHHHHHHcCCHHHHHHHHHc-CCchhhhcCCCCChhHHH
Confidence 133333334 5789999999999875 22356679999999999998888776 58899888775 69999
Q ss_pred HHHHcCCHH---HHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHH
Q 005931 250 LAVRFDKYN---AFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQ 322 (669)
Q Consensus 250 ~Av~~~~~~---iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~ 322 (669)
+|......+ ++++|++. ++++|.+|..|.||||+|+..++.+++++|+ +.|+|++.+|..|.|||++|..
T Consensus 380 ~A~~n~~~~v~~IlklLIs~--GADIN~kD~~G~TPLh~Aa~~~n~eivelLL-s~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 380 PTLSIHESDVLSILKLCKPY--IDDINKIDKHGRSILYYCIESHSVSLVEWLI-DNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred HHHHhccHhHHHHHHHHHhc--CCccccccccCcchHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHH
Confidence 988776654 57777875 6789999999999999999999999999999 6689999999999999999976
No 36
>PF13962 PGG: Domain of unknown function
Probab=99.96 E-value=1.2e-28 Score=214.23 Aligned_cols=112 Identities=37% Similarity=0.644 Sum_probs=99.2
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHhccccCCCccCCCCCCCCccccCCCc-cceeehhhhhHHHHHHHHHHHHHHhcccch
Q 005931 464 REALQNARNTIILVAILIATVTYTGGISPPGGVYQEGPLKGKSLVGRTK-AFKIFEISNNIALFTSLSIVIILVSIIPFE 542 (669)
Q Consensus 464 ~~~~~~~~~~~~~va~liatvtf~a~~~~Pgg~~~~~~~~g~~~~~~~~-~f~~F~~~~~~a~~~S~~~~~~l~~~~~~~ 542 (669)
+||++++||+++||||||||||||||+|||||+|||+++.|+|++.+++ .|.+|+++|++||++|+++++++++.....
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~~~~ 80 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGLDDF 80 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 4789999999999999999999999999999999987678999998777 999999999999999999999998534222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 005931 543 RKKLMRLLVITHKVMWVSISFMATAYIAATRIT 575 (669)
Q Consensus 543 ~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~ 575 (669)
.+..++.+.+++.+||+++.+|++||++|+++|
T Consensus 81 ~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v 113 (113)
T PF13962_consen 81 RRFLRRYLLIASVLMWIALISMMVAFAAGIYLV 113 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 445556788888899999999999999999875
No 37
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.95 E-value=1.2e-27 Score=251.00 Aligned_cols=210 Identities=27% Similarity=0.361 Sum_probs=173.9
Q ss_pred ChHHHHHHHcCCHHHHHHHHHh-CCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcC
Q 005931 41 NTALHLAARFGHVELVTEITKL-CPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQG 119 (669)
Q Consensus 41 ~T~Lh~Aa~~g~~e~vk~Ll~~-~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g 119 (669)
.+.++.|+++|.++-|+.|++. +.+ ++..|.+|.|+||+||.+++.+++++|+++|++++..-..-+.||||+|+++|
T Consensus 45 ~~~~v~A~q~G~l~~v~~lve~~g~~-v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G 123 (600)
T KOG0509|consen 45 LDDIVKATQYGELETVKELVESEGES-VNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNG 123 (600)
T ss_pred hhhhhhHhhcchHHHHHHHHhhcCcC-CCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcC
Confidence 4567788888888888888887 444 77778888888888888888888888888888887775577788888888888
Q ss_pred CHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcC
Q 005931 120 HLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHN 199 (669)
Q Consensus 120 ~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g 199 (669)
+..+|++|+++|+++. ..|..|.+|+|.|++.|+.-++-+++.++.+ ++.+|.+|+||||+|+.+|+...+..|++.+
T Consensus 124 ~~~vv~lLlqhGAdpt-~~D~~G~~~lHla~~~~~~~~vayll~~~~d-~d~~D~~grTpLmwAaykg~~~~v~~LL~f~ 201 (600)
T KOG0509|consen 124 HISVVDLLLQHGADPT-LKDKQGLTPLHLAAQFGHTALVAYLLSKGAD-IDLRDNNGRTPLMWAAYKGFALFVRRLLKFG 201 (600)
T ss_pred cHHHHHHHHHcCCCCc-eecCCCCcHHHHHHHhCchHHHHHHHHhccc-CCCcCCCCCCHHHHHHHhcccHHHHHHHHhc
Confidence 8888888888888876 5677788888888888888888888888744 5788888888888888888877788888888
Q ss_pred CccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHc
Q 005931 200 KDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRF 254 (669)
Q Consensus 200 ~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~ 254 (669)
+++....+.+|.||||+|+..|+..++. |+.+.+.+.+..|.+|+||+.+|...
T Consensus 202 a~~~~~d~~~g~TpLHwa~~~gN~~~v~-Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 202 ASLLLTDDNHGNTPLHWAVVGGNLTAVK-LLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred ccccccccccCCchHHHHHhcCCcceEe-hhhhcCCcccccccCCCCHHHHHHHh
Confidence 8888876688888888888888888887 77788888888888888888888766
No 38
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.95 E-value=7.7e-27 Score=234.41 Aligned_cols=81 Identities=28% Similarity=0.313 Sum_probs=71.8
Q ss_pred cccCCCCcHHHHHHHcC-------------CHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcc
Q 005931 239 RLTTYGETVFHLAVRFD-------------KYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLD 305 (669)
Q Consensus 239 ~~d~~g~t~Lh~Av~~~-------------~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d 305 (669)
.+.++|.|+||+|+..+ +..+++.|++. +.++|.+|.+||||||+|+++....++..|+ +.|+.
T Consensus 477 pr~~~~ft~LH~av~~~tt~~gry~v~~fPs~~V~k~Llec--gadvna~D~~~ntplHIa~~~~~~si~~aLi-e~Gah 553 (615)
T KOG0508|consen 477 PRGKNGFTLLHLAVDKNTTNVGRYPVCRFPSAHVTKVLLEC--GADVNARDFDNNTPLHIAAQNNCPSIVNALI-EAGAH 553 (615)
T ss_pred ccccCCCchhhhhhccCCCCCCcccccCCcHHHHHHHHHHc--CCCCCcccCCCCchhHHHHHhccHHHHHHHH-Hcccc
Confidence 45678999999999653 24688999997 7899999999999999999999999999999 89999
Q ss_pred cccccCCCCCHHHHHHH
Q 005931 306 IYCRNHKNQTALDIIEQ 322 (669)
Q Consensus 306 ~~~~n~~g~T~L~~a~~ 322 (669)
.+++|..|.|++++...
T Consensus 554 ~datN~~~~t~~~ll~~ 570 (615)
T KOG0508|consen 554 LDATNAHKKTALDLLDE 570 (615)
T ss_pred hhhhhhccccHHHHhch
Confidence 99999999999997544
No 39
>PHA02792 ankyrin-like protein; Provisional
Probab=99.95 E-value=1.5e-26 Score=250.34 Aligned_cols=286 Identities=8% Similarity=0.085 Sum_probs=225.3
Q ss_pred cCHHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHH-cCCHHHHHHHHHhCCc------------------
Q 005931 5 MAQNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAAR-FGHVELVTEITKLCPE------------------ 65 (669)
Q Consensus 5 m~~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~-~g~~e~vk~Ll~~~~~------------------ 65 (669)
.++-=+-|...|++|.++.|++ + +..++.++..|.|+||+|+. .|+.|++++|++.|++
T Consensus 72 ~~~~~~~~s~n~~lElvk~LI~-~-GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~ 149 (631)
T PHA02792 72 FDIFEYLCSDNIDIELLKLLIS-K-GLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITR 149 (631)
T ss_pred ccHHHHHHHhcccHHHHHHHHH-c-CCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhccc
Confidence 3443466788999999999999 3 57788888889999999976 6999999999999864
Q ss_pred -----------------cccccCCCCCcHHHHHHHcC-------CHHHHHHHHhhCCccccccCCCCCcHHHHHHHcC--
Q 005931 66 -----------------LVAAENEKLETPLHEACCQG-------NHEVSAFLMEANPTVATKLNHESQSAFSLACRQG-- 119 (669)
Q Consensus 66 -----------------~~~~~n~~g~TpLh~Aa~~g-------~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g-- 119 (669)
..+..|..|.||||+|+.++ +.|++++|+++|+++... +..|.||||+|+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~-d~~g~t~l~~~~~~~~i 228 (631)
T PHA02792 150 AEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYY-TYREHTTLYYYVDKCDI 228 (631)
T ss_pred ccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCcc-CCCCChHHHHHHHcccc
Confidence 12345667999999999999 899999999999998876 888999999999999
Q ss_pred CHHHHHHHHcCCCcccc------------------ccC---------CCC----------------------------Cc
Q 005931 120 HLDVVKLLINQSWLMEF------------------EED---------SVE----------------------------ST 144 (669)
Q Consensus 120 ~~eiv~~Ll~~~~~~~~------------------~~~---------~~~----------------------------~t 144 (669)
..|++++|++....... ..| +.+ +-
T Consensus 229 ~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~ 308 (631)
T PHA02792 229 KREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQD 308 (631)
T ss_pred hHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHH
Confidence 88999999875321000 000 000 11
Q ss_pred HHHHHHHcC--CHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCC--CChHHHHHHHc
Q 005931 145 PIYLAISRG--HTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKD--GYTPLHLAAIN 220 (669)
Q Consensus 145 ~L~~A~~~g--~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~--g~tpLh~Aa~~ 220 (669)
.||.-...+ +.+++++|++.+.... .......++.|+..|+.+++++|+++|++++.. |.+ +.||||.|+..
T Consensus 309 ~l~~Yl~~~~v~ieiIK~LId~Ga~~~---r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~k-D~~g~~~TpLh~A~~n 384 (631)
T PHA02792 309 LLSEYVSYHTVYINVIKCMIDEGATLY---RFKHINKYFQKFDNRDPKVVEYILKNGNVVVED-DDNIINIMPLFPTLSI 384 (631)
T ss_pred HHHHHHhcCCccHHHHHHHHHCCCccc---cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhh-cCCCCChhHHHHHHHh
Confidence 233444444 5788999999888753 123556799999999999999999999999875 665 46999998877
Q ss_pred CCHHH--HHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHH---cCC----
Q 005931 221 GRVKI--LVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVL---RKN---- 291 (669)
Q Consensus 221 g~~e~--v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~---~~~---- 291 (669)
...+. +..++...+++++.+|..|+||||+|+..++.+++++|+++ +++++.+|..|+||||+|+. .++
T Consensus 385 ~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~--GADIN~kD~~G~TpL~~A~~~~~~~~~~i~ 462 (631)
T PHA02792 385 HESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDN--GADINITTKYGSTCIGICVILAHACIPEIA 462 (631)
T ss_pred ccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHHHhcccHHHH
Confidence 66543 23344566689999999999999999999999999999997 77899999999999999976 222
Q ss_pred ---HHHHHHHH
Q 005931 292 ---YQFVEYII 299 (669)
Q Consensus 292 ---~~iv~~Ll 299 (669)
.+++++|+
T Consensus 463 ~~~~~il~lLL 473 (631)
T PHA02792 463 ELYIKILEIIL 473 (631)
T ss_pred HHHHHHHHHHH
Confidence 35577777
No 40
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.92 E-value=2.6e-24 Score=209.78 Aligned_cols=176 Identities=16% Similarity=0.259 Sum_probs=151.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcC--CHHHHHHHHhcCCccccccCCCCChHHHHHH
Q 005931 141 VESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIG--NVNMTKLLLNHNKDLALQYNKDGYTPLHLAA 218 (669)
Q Consensus 141 ~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g--~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa 218 (669)
.+.+||+.|+..|+.++++.|++. .+..|..|.||||+|+..+ +.+++++|+++|++++...+..|.||||+|+
T Consensus 20 ~~~~pL~~A~~~~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~ 95 (209)
T PHA02859 20 RYCNPLFYYVEKDDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYL 95 (209)
T ss_pred ccCcHHHHHHHhCcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHH
Confidence 357899999999999999999875 3456888999999999754 8999999999999999873468999999987
Q ss_pred Hc---CCHHHHHHHHhcCCCCcccccCCCCcHHHHHHH--cCCHHHHHHHHHhcCCCCCccCCCCCCcHHHH-HHHcCCH
Q 005931 219 IN---GRVKILVAFLSSSPASFDRLTTYGETVFHLAVR--FDKYNAFKFLAESFNTCLFHGQDQFGNTVLHL-AVLRKNY 292 (669)
Q Consensus 219 ~~---g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~--~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~-A~~~~~~ 292 (669)
.. ++.++++.|+. .+++++.+|..|+||||+|+. .++.+++++|++. +.+++.+|.+|+||||. |+..++.
T Consensus 96 ~~~~~~~~eiv~~Ll~-~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~--gadin~~d~~g~t~Lh~~a~~~~~~ 172 (209)
T PHA02859 96 SFNKNVEPEILKILID-SGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDS--GVSFLNKDFDNNNILYSYILFHSDK 172 (209)
T ss_pred HhCccccHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHc--CCCcccccCCCCcHHHHHHHhcCCH
Confidence 63 47888877775 568999999999999999986 4689999999986 67889999999999996 5667899
Q ss_pred HHHHHHHHhcCcccccccCCCCCHHHHHHHcC
Q 005931 293 QFVEYIIKETVLDIYCRNHKNQTALDIIEQAG 324 (669)
Q Consensus 293 ~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~ 324 (669)
+++++|+ +.|+|++.+|..|+|||++|...+
T Consensus 173 ~iv~~Ll-~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 173 KIFDFLT-SLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred HHHHHHH-HcCCCCCCCCCCCCCHHHHHhhhh
Confidence 9999999 678899999999999999997644
No 41
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.92 E-value=8.1e-24 Score=206.29 Aligned_cols=178 Identities=19% Similarity=0.199 Sum_probs=132.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcC--CHHHHHHHHhhCCccccccCCCCCcHHHH
Q 005931 37 DASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQG--NHEVSAFLMEANPTVATKLNHESQSAFSL 114 (669)
Q Consensus 37 d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g--~~eivk~Ll~~~~~~~~~~~~~g~tpL~~ 114 (669)
...+.||||.|+..|+.++|+.|++. .+..|..|.||||+|+..+ +.+++++|+++|++++...+..|.||||+
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~ 93 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHH 93 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHH
Confidence 45678899999999999999988875 3456788899999988754 88999999999888876634578888888
Q ss_pred HHHc---CCHHHHHHHHcCCCccccccCCCCCcHHHHHHH--cCCHHHHHHHHhcCCcccCCCCCCCChHHHH-HHhcCC
Q 005931 115 ACRQ---GHLDVVKLLINQSWLMEFEEDSVESTPIYLAIS--RGHTDIAREILEVRPRFAGKTDKNGFSPLHY-ASSIGN 188 (669)
Q Consensus 115 A~~~---g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~--~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~-Aa~~g~ 188 (669)
|+.. ++.+++++|++++.+.+ ..+..|.||||.|+. .++.+++++|++.+.+. +.+|.+|.||||. ++..++
T Consensus 94 a~~~~~~~~~eiv~~Ll~~gadin-~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadi-n~~d~~g~t~Lh~~a~~~~~ 171 (209)
T PHA02859 94 YLSFNKNVEPEILKILIDSGSSIT-EEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSF-LNKDFDNNNILYSYILFHSD 171 (209)
T ss_pred HHHhCccccHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc-ccccCCCCcHHHHHHHhcCC
Confidence 7653 46788888888877766 456667778877765 35677777777777664 5567777777774 455667
Q ss_pred HHHHHHHHhcCCccccccCCCCChHHHHHHHcC
Q 005931 189 VNMTKLLLNHNKDLALQYNKDGYTPLHLAAING 221 (669)
Q Consensus 189 ~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g 221 (669)
.+++++|+++|++++.. |..|.|||++|+.++
T Consensus 172 ~~iv~~Ll~~Gadi~~~-d~~g~tpl~la~~~~ 203 (209)
T PHA02859 172 KKIFDFLTSLGIDINET-NKSGYNCYDLIKFRN 203 (209)
T ss_pred HHHHHHHHHcCCCCCCC-CCCCCCHHHHHhhhh
Confidence 77777777777777764 777777777776543
No 42
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-24 Score=236.29 Aligned_cols=292 Identities=24% Similarity=0.268 Sum_probs=187.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHH
Q 005931 37 DASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLAC 116 (669)
Q Consensus 37 d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~ 116 (669)
..+-.|+|-.||..||.|+|+.|+..|++ ...+|..|.+||.+|+-.||..+|+.|+.+.+++....|..+.|+|.+||
T Consensus 754 e~n~~t~LT~acaggh~e~vellv~rgan-iehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlac 832 (2131)
T KOG4369|consen 754 EPNIKTNLTSACAGGHREEVELLVVRGAN-IEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLAC 832 (2131)
T ss_pred CccccccccccccCccHHHHHHHHHhccc-ccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEec
Confidence 34456677777777777777777777666 56667777777777777777777777777777766666677777777777
Q ss_pred HcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCC-CCCCChHHHHHHhcCCHHHHHHH
Q 005931 117 RQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKT-DKNGFSPLHYASSIGNVNMTKLL 195 (669)
Q Consensus 117 ~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~-d~~g~t~Lh~Aa~~g~~eiv~~L 195 (669)
..|..++|++||..+...+ .++-...|||.+|...|..+++..|+..+..+.... .+.|.+||.+|..+|+.+.++.|
T Consensus 833 sggr~~vvelLl~~ganke-hrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~l 911 (2131)
T KOG4369|consen 833 SGGRTRVVELLLNAGANKE-HRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSL 911 (2131)
T ss_pred CCCcchHHHHHHHhhcccc-ccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHH
Confidence 7777777777776665544 344445667777777777777777777665543222 33466777777777777777777
Q ss_pred HhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccC
Q 005931 196 LNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQ 275 (669)
Q Consensus 196 l~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~ 275 (669)
++.|.+++.....+..|+|-+|+..|+.+++..||.. .+.+.++.+.|-|||+-++..|..++=++|+..+.+......
T Consensus 912 l~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~-~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPv 990 (2131)
T KOG4369|consen 912 LQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAA-QANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPV 990 (2131)
T ss_pred hcccchhccccccccccceeeccccCcchHHHHHHHH-hhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCC
Confidence 7777777766666666777777777777765544443 356666667777777777777777777777665322222223
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHHcCCCchHHHH
Q 005931 276 DQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQAGTNDDATSL 332 (669)
Q Consensus 276 D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~~~~~~~~l 332 (669)
-....|+|-+++..|+...++.|+ ++.+.+..+|++|+|+|.+|+..+.......+
T Consensus 991 p~T~dtalti~a~kGh~kfv~~ll-n~~atv~v~NkkG~T~Lwla~~Gg~lss~~il 1046 (2131)
T KOG4369|consen 991 PNTWDTALTIPANKGHTKFVPKLL-NGDATVRVPNKKGCTVLWLASAGGALSSCPIL 1046 (2131)
T ss_pred CCcCCccceeecCCCchhhhHHhh-CCccceecccCCCCcccchhccCCccccchHH
Confidence 344456666666666666666666 55556666666666666666665554444333
No 43
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.90 E-value=1.5e-24 Score=235.11 Aligned_cols=321 Identities=20% Similarity=0.232 Sum_probs=285.1
Q ss_pred cCHHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHc
Q 005931 5 MAQNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQ 84 (669)
Q Consensus 5 m~~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~ 84 (669)
.+..|-.|+..|+.|+++.++. .+..+..+|+.|.+||.+|+-.||..+|+.|++...++....|+.++|+|.+||..
T Consensus 757 ~~t~LT~acaggh~e~vellv~--rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsg 834 (2131)
T KOG4369|consen 757 IKTNLTSACAGGHREEVELLVV--RGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSG 834 (2131)
T ss_pred ccccccccccCccHHHHHHHHH--hcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCC
Confidence 4455778899999999999998 33667889999999999999999999999999999998888899999999999999
Q ss_pred CCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccc-cCCCCCcHHHHHHHcCCHHHHHHHHh
Q 005931 85 GNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFE-EDSVESTPIYLAISRGHTDIAREILE 163 (669)
Q Consensus 85 g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~-~~~~~~t~L~~A~~~g~~~iv~~Ll~ 163 (669)
|..++|++||..|++...+ |....|||.+|...|..+++..|+..+..++.. -.+.|.+||.+|.++|+.+.++.|++
T Consensus 835 gr~~vvelLl~~gankehr-nvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~ 913 (2131)
T KOG4369|consen 835 GRTRVVELLLNAGANKEHR-NVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQ 913 (2131)
T ss_pred CcchHHHHHHHhhcccccc-chhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhc
Confidence 9999999999999987665 889999999999999999999999999776532 34558899999999999999999999
Q ss_pred cCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccc--c
Q 005931 164 VRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRL--T 241 (669)
Q Consensus 164 ~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~--d 241 (669)
.+.+++.....+.+|+|-+|+..|+.|++.+||...+.+..+ -+.|.|||.-++..|.+++-. +|...+++.+.- -
T Consensus 914 ~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehR-aktgltplme~AsgGyvdvg~-~li~~gad~nasPvp 991 (2131)
T KOG4369|consen 914 PGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHR-AKTGLTPLMEMASGGYVDVGN-LLIAAGADTNASPVP 991 (2131)
T ss_pred ccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhh-cccCCcccchhhcCCccccch-hhhhcccccccCCCC
Confidence 999998888889999999999999999999999999988876 889999999999999999754 444555776643 3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHH
Q 005931 242 TYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIE 321 (669)
Q Consensus 242 ~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~ 321 (669)
..-.|+|-+++..|+.+.+..|+.. ++-+..++++|+|+|-+|+..|....+.+|+ +.++|++..|+.-.+++..|.
T Consensus 992 ~T~dtalti~a~kGh~kfv~~lln~--~atv~v~NkkG~T~Lwla~~Gg~lss~~il~-~~~ad~d~qdnr~~S~~maaf 1068 (2131)
T KOG4369|consen 992 NTWDTALTIPANKGHTKFVPKLLNG--DATVRVPNKKGCTVLWLASAGGALSSCPILV-SSVADADQQDNRTNSRTMAAF 1068 (2131)
T ss_pred CcCCccceeecCCCchhhhHHhhCC--ccceecccCCCCcccchhccCCccccchHHh-hcccChhhhhcccccccHHHH
Confidence 4556899999999999999999974 5667789999999999999999999999999 888899999999999999999
Q ss_pred HcCCCchHHHHH
Q 005931 322 QAGTNDDATSLK 333 (669)
Q Consensus 322 ~~~~~~~~~~l~ 333 (669)
+.++.+++..+.
T Consensus 1069 RKgh~~iVk~mv 1080 (2131)
T KOG4369|consen 1069 RKGHFAIVKKMV 1080 (2131)
T ss_pred Hhchhheecccc
Confidence 999887765544
No 44
>PHA02795 ankyrin-like protein; Provisional
Probab=99.90 E-value=1.3e-22 Score=212.52 Aligned_cols=170 Identities=15% Similarity=0.155 Sum_probs=94.7
Q ss_pred HHHHcCCHHHHHHHHHhCCcccc------ccCCCCCcHHHHHHH--cCCHHHHHHHHhhCCccccccCCCCCcHHHHHHH
Q 005931 46 LAARFGHVELVTEITKLCPELVA------AENEKLETPLHEACC--QGNHEVSAFLMEANPTVATKLNHESQSAFSLACR 117 (669)
Q Consensus 46 ~Aa~~g~~e~vk~Ll~~~~~~~~------~~n~~g~TpLh~Aa~--~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~ 117 (669)
+|+..+..|+++.|+..+.+ ++ ..+..++|+||+|+. .|+.++|++|+++|+++.. .++.||+|.|+.
T Consensus 83 ~~~~~~~k~~~~~l~s~~~~-~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~---~~~~t~lh~A~~ 158 (437)
T PHA02795 83 LFAYITYKDIISALVSKNYM-EDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYK---IECLNAYFRGIC 158 (437)
T ss_pred HHhhcchHHHHHHHHhcccc-cchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCC---CCCCCHHHHHHH
Confidence 66666666777766666665 22 355556667776666 6666777777776666643 234566666666
Q ss_pred cCCHHHHHHHHcCCCcccccc-----CCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHH
Q 005931 118 QGHLDVVKLLINQSWLMEFEE-----DSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMT 192 (669)
Q Consensus 118 ~g~~eiv~~Ll~~~~~~~~~~-----~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv 192 (669)
.++.+++++|++++....... +..+.+++|.|...++.++++.|++++.+. +.+|..|.||||+|+..|+.+++
T Consensus 159 ~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADI-N~kD~~G~TpLh~Aa~~g~~eiV 237 (437)
T PHA02795 159 KKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDI-NQLDAGGRTLLYRAIYAGYIDLV 237 (437)
T ss_pred cCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCc-CcCCCCCCCHHHHHHHcCCHHHH
Confidence 666666666666665322111 012334455555555555555555554443 44455555555555555555555
Q ss_pred HHHHhcCCccccccCCCCChHHHHHHHcC
Q 005931 193 KLLLNHNKDLALQYNKDGYTPLHLAAING 221 (669)
Q Consensus 193 ~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g 221 (669)
++|+++|++++.. |..|.||||.|+.+|
T Consensus 238 elLL~~GAdIN~~-d~~G~TpLh~Aa~~g 265 (437)
T PHA02795 238 SWLLENGANVNAV-MSNGYTCLDVAVDRG 265 (437)
T ss_pred HHHHHCCCCCCCc-CCCCCCHHHHHHHcC
Confidence 5555555555443 445555555555544
No 45
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.90 E-value=4.3e-23 Score=218.89 Aligned_cols=256 Identities=22% Similarity=0.258 Sum_probs=213.1
Q ss_pred ccCHHHHHHHHhCCHHHHHHHHcCcch-----------hhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCC
Q 005931 4 GMAQNLSEAIVRNDKQALINLVGCSNK-----------RILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENE 72 (669)
Q Consensus 4 ~m~~~L~~Ai~~gd~~~l~~ll~~~~~-----------~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~ 72 (669)
+|...|.+|++.||.+.+..+|+...+ ...+..|.+|.|+||.||.+|+.++++.|++..+- +...+.
T Consensus 2 gk~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~-ldl~d~ 80 (854)
T KOG0507|consen 2 GKKQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEAL-LDLCDT 80 (854)
T ss_pred chhhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhh-hhhhhc
Confidence 577889999999999999999983221 23455588999999999999999999999998776 677789
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHc
Q 005931 73 KLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISR 152 (669)
Q Consensus 73 ~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~ 152 (669)
+|.+|||+|+..|+.|++++|+.++.. .+..+..|.||||.|++.||.+++.+|+.++.+.. ..+..+.|+|..|++.
T Consensus 81 kg~~plhlaaw~g~~e~vkmll~q~d~-~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~-i~nns~~t~ldlA~qf 158 (854)
T KOG0507|consen 81 KGILPLHLAAWNGNLEIVKMLLLQTDI-LNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPF-IRNNSKETVLDLASRF 158 (854)
T ss_pred cCcceEEehhhcCcchHHHHHHhcccC-CCcccccCcCccchhhhhcchHHHHHHHhcCCCcc-ccCcccccHHHHHHHh
Confidence 999999999999999999999999844 45558999999999999999999999999998875 5667788999999999
Q ss_pred CCHHHHHHHHhcCCcc-------cCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHH
Q 005931 153 GHTDIAREILEVRPRF-------AGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKI 225 (669)
Q Consensus 153 g~~~iv~~Ll~~~~~~-------~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~ 225 (669)
|..++++.|++..-.. ...++..+.+|||.|+.+|+.++++.|++.|.+++.. ....|+||.|+..|..++
T Consensus 159 gr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~--t~~gtalheaalcgk~ev 236 (854)
T KOG0507|consen 159 GRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYT--TEDGTALHEAALCGKAEV 236 (854)
T ss_pred hhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccc--cccchhhhhHhhcCcchh
Confidence 9999999998762111 1234556788999999999999999999999999874 445689999999999999
Q ss_pred HHHHHhcCCCCcccccCCCCcHHHHHHHc---CCHHHHHHHHH
Q 005931 226 LVAFLSSSPASFDRLTTYGETVFHLAVRF---DKYNAFKFLAE 265 (669)
Q Consensus 226 v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~---~~~~iv~~Ll~ 265 (669)
+..||+.+ ...+..+.+|+|+|.+-... ...+++-++..
T Consensus 237 vr~ll~~g-in~h~~n~~~qtaldil~d~~~~~~~ei~ga~~~ 278 (854)
T KOG0507|consen 237 VRFLLEIG-INTHIKNQHGQTALDIIIDLQENRRYEIAGAVKN 278 (854)
T ss_pred hhHHHhhc-cccccccccchHHHHHHHhcchhhhhhhhhhhhc
Confidence 87777554 78888999999998876643 44555555543
No 46
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.90 E-value=9.4e-21 Score=220.17 Aligned_cols=252 Identities=19% Similarity=0.128 Sum_probs=150.6
Q ss_pred HHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHH-HHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcC
Q 005931 7 QNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALH-LAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQG 85 (669)
Q Consensus 7 ~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh-~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g 85 (669)
..++.|+.+||.+.++.+++...+..++..|..|.|||| .|+..++.++++.|++.+. .+..|+||||.|+..+
T Consensus 19 ~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~A~~~~ 93 (743)
T TIGR00870 19 KAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHAISLEY 93 (743)
T ss_pred HHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHHHHhcc
Confidence 446777777777777777763223445566677777777 6666677777777776654 4556777777776521
Q ss_pred ---CHHHHHHHHhhCCcc---------ccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcC
Q 005931 86 ---NHEVSAFLMEANPTV---------ATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRG 153 (669)
Q Consensus 86 ---~~eivk~Ll~~~~~~---------~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g 153 (669)
..++++.+...++.. ....+..|.||||+|+.+|+.++|++|++++++.+.... +....
T Consensus 94 ~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~--~~~~~------- 164 (743)
T TIGR00870 94 VDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARAC--GDFFV------- 164 (743)
T ss_pred HHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcC--Cchhh-------
Confidence 122333333322210 001123466666666666666666666666655541111 10000
Q ss_pred CHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCC-----H----H
Q 005931 154 HTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGR-----V----K 224 (669)
Q Consensus 154 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~-----~----e 224 (669)
. ... ......|.||||.|+..|+.+++++|+++|++++.. |..|+||||+|+..+. . .
T Consensus 165 ---------~-~~~--~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~-d~~g~T~Lh~A~~~~~~~~~~~~l~~~ 231 (743)
T TIGR00870 165 ---------K-SQG--VDSFYHGESPLNAAACLGSPSIVALLSEDPADILTA-DSLGNTLLHLLVMENEFKAEYEELSCQ 231 (743)
T ss_pred ---------c-CCC--CCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhH-hhhhhHHHHHHHhhhhhhHHHHHHHHH
Confidence 0 000 011245788999999889999999999988888876 8888999998888761 1 1
Q ss_pred HHHHH---HhcCCCCc----ccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHH
Q 005931 225 ILVAF---LSSSPASF----DRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVL 288 (669)
Q Consensus 225 ~v~~L---L~~~~~~i----~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~ 288 (669)
+.+.+ +... .+. +..|.+|.||||+|+..|+.+++++|++... ........++.|.+++..
T Consensus 232 ~~~~l~~ll~~~-~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~--~~kk~~a~~~~~~~~~~~ 299 (743)
T TIGR00870 232 MYNFALSLLDKL-RDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKY--KQKKFVAWPNGQQLLSLY 299 (743)
T ss_pred HHHHHHHHHhcc-CChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHH--hcceeeccCcchHhHhhh
Confidence 22222 2221 122 5567888899999988888888888887521 122234556667776654
No 47
>PHA02795 ankyrin-like protein; Provisional
Probab=99.89 E-value=2.3e-22 Score=210.66 Aligned_cols=199 Identities=12% Similarity=0.076 Sum_probs=144.0
Q ss_pred HHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccc------cccCCCCCcHHHHHHH--cCCHHHHHHH
Q 005931 56 VTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVA------TKLNHESQSAFSLACR--QGHLDVVKLL 127 (669)
Q Consensus 56 vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~------~~~~~~g~tpL~~A~~--~g~~eiv~~L 127 (669)
-++++.+|.+ .+....+| +|+..+..|++++|+.+|++++ . .+..++|+||+++. .|+.++|++|
T Consensus 65 ~~~~~~~~~~-i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~-~~~~~~~~L~~~~~n~~n~~eiV~~L 137 (437)
T PHA02795 65 YDYFRIHRDN-IDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIK-NCNSVQDLLLYYLSNAYVEIDIVDFM 137 (437)
T ss_pred HHHHHHcCcc-hhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhh-ccccccHHHHHHHHhcCCCHHHHHHH
Confidence 3566677766 45555555 8888888888888888888755 3 46668888888888 7888888888
Q ss_pred HcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCC-----CCCChHHHHHHhcCCHHHHHHHHhcCCcc
Q 005931 128 INQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTD-----KNGFSPLHYASSIGNVNMTKLLLNHNKDL 202 (669)
Q Consensus 128 l~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d-----~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~ 202 (669)
+++|++.+. . .+.||+|.|+..++.+++++|+.++....+..+ ..+.+++|.|+..++.+++++|+++|+++
T Consensus 138 I~~GADIn~-~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADI 214 (437)
T PHA02795 138 VDHGAVIYK-I--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDI 214 (437)
T ss_pred HHCCCCCCC-C--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCc
Confidence 888887753 2 236788888888888888888887754322221 23667777777777777777777777777
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCC--------HHHHHHHHHh
Q 005931 203 ALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDK--------YNAFKFLAES 266 (669)
Q Consensus 203 ~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~--------~~iv~~Ll~~ 266 (669)
+.. |..|.||||+|+..|+.++++.|+.. |++++.+|..|+||||+|+..|+ .+++++|++.
T Consensus 215 N~k-D~~G~TpLh~Aa~~g~~eiVelLL~~-GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~ 284 (437)
T PHA02795 215 NQL-DAGGRTLLYRAIYAGYIDLVSWLLEN-GANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLRE 284 (437)
T ss_pred CcC-CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhC
Confidence 765 77777777777777777777666644 46777777777777777777763 5777777765
No 48
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.89 E-value=1.9e-23 Score=190.47 Aligned_cols=264 Identities=23% Similarity=0.270 Sum_probs=208.5
Q ss_pred hHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCH
Q 005931 42 TALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHL 121 (669)
Q Consensus 42 T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~ 121 (669)
..+..++..|-.+.-..|..... ..++..|+.-+-.+.+.|+.+++..++...++-....+.+|.++++.++-.++.
T Consensus 33 a~~~~~~~m~~t~p~~~l~~~~s---~~~~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~ 109 (296)
T KOG0502|consen 33 AELFEQVEMGTTEPRCALTAEIS---ALRNALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSV 109 (296)
T ss_pred HHHHHHhhccccchhHHHHHHHH---HHHHhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCc
Confidence 34555666666555555554332 234556777777888888888888888877777766777888888888888888
Q ss_pred HHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCc
Q 005931 122 DVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKD 201 (669)
Q Consensus 122 eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~ 201 (669)
+.++.++.++...+ +.+-.+.+|+.+++...+.+.+..+.+. ..+..|+.|.|||.||+.+|++++|++|++.|++
T Consensus 110 ~k~sttltN~~rgn-evs~~p~s~~slsVhql~L~~~~~~~~n---~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAd 185 (296)
T KOG0502|consen 110 DKVSTTLTNGARGN-EVSLMPWSPLSLSVHQLHLDVVDLLVNN---KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGAD 185 (296)
T ss_pred ceeeeeecccccCC-ccccccCChhhHHHHHHHHHHHHHHhhc---cccCccccCchHhHHHHhcCchHHHHHHHHcCCC
Confidence 88888888776655 5666688899999988888877666553 3577899999999999999999999999999999
Q ss_pred cccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCc
Q 005931 202 LALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNT 281 (669)
Q Consensus 202 ~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~T 281 (669)
+... .+...++|.+|++.|..++++.||.+. .++|..|-+|-|||.+|++.++.++++.|++. +++++..|..|++
T Consensus 186 p~~l-gk~resALsLAt~ggytdiV~lLL~r~-vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~s--GAd~t~e~dsGy~ 261 (296)
T KOG0502|consen 186 PDAL-GKYRESALSLATRGGYTDIVELLLTRE-VDVNVYDWNGGTPLLYAVRGNHVKCVESLLNS--GADVTQEDDSGYW 261 (296)
T ss_pred hhhh-hhhhhhhHhHHhcCChHHHHHHHHhcC-CCcceeccCCCceeeeeecCChHHHHHHHHhc--CCCcccccccCCc
Confidence 8876 777789999999999999877666554 68899999999999999999999999999886 7788888899999
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHH
Q 005931 282 VLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALD 318 (669)
Q Consensus 282 pLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~ 318 (669)
++.+|+..|+. +|+..+ +.-++.+.+|+.-.||+|
T Consensus 262 ~mdlAValGyr-~Vqqvi-e~h~lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 262 IMDLAVALGYR-IVQQVI-EKHALKLCQDSEKRTPLH 296 (296)
T ss_pred HHHHHHHhhhH-HHHHHH-HHHHHHHhhcccCCCCCC
Confidence 99999998877 777777 555577777777777653
No 49
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.89 E-value=1.6e-22 Score=214.53 Aligned_cols=249 Identities=21% Similarity=0.239 Sum_probs=152.8
Q ss_pred hHHHHHHHcCCHHHHHHHHHhC------------CccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCC
Q 005931 42 TALHLAARFGHVELVTEITKLC------------PELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQ 109 (669)
Q Consensus 42 T~Lh~Aa~~g~~e~vk~Ll~~~------------~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~ 109 (669)
+-|.-||+.|+.+.+..|++.. ++..+.+|.+|.|+||.|+.+|+.+++++|++..+-+... +..|.
T Consensus 5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~-d~kg~ 83 (854)
T KOG0507|consen 5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLC-DTKGI 83 (854)
T ss_pred hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhh-hccCc
Confidence 4466788888888888888752 2335667777888888888888888888888777665444 56777
Q ss_pred cHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCH
Q 005931 110 SAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNV 189 (669)
Q Consensus 110 tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~ 189 (669)
+|||+|+..|+.|+++.++.++...+ ..+..|.||||.|++.|+.+++.+|++++.+. ..++..+.|+|..|++.|..
T Consensus 84 ~plhlaaw~g~~e~vkmll~q~d~~n-a~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp-~i~nns~~t~ldlA~qfgr~ 161 (854)
T KOG0507|consen 84 LPLHLAAWNGNLEIVKMLLLQTDILN-AVNIENETPLHLAAQHGHLEVVFYLLKKNADP-FIRNNSKETVLDLASRFGRA 161 (854)
T ss_pred ceEEehhhcCcchHHHHHHhcccCCC-cccccCcCccchhhhhcchHHHHHHHhcCCCc-cccCcccccHHHHHHHhhhh
Confidence 77777777777777777776663333 44445666666666666666666666666553 45566666666666666666
Q ss_pred HHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCC
Q 005931 190 NMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNT 269 (669)
Q Consensus 190 eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~ 269 (669)
++++.|+...-..... ..-+ -..++..+-+|||.|+++|+.++++.|++. +
T Consensus 162 ~Vvq~ll~~~~~~~~~-------------------------~~~~--~~~~~~~~~~plHlaakngh~~~~~~ll~a--g 212 (854)
T KOG0507|consen 162 EVVQMLLQKKFPVQSS-------------------------LRVG--DIKRPFPAIYPLHLAAKNGHVECMQALLEA--G 212 (854)
T ss_pred HHHHHHhhhccchhhc-------------------------ccCC--CCCCCCCCcCCcchhhhcchHHHHHHHHhc--C
Confidence 6666666552111100 0000 122334455566666666666666666553 4
Q ss_pred CCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHHcC
Q 005931 270 CLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQAG 324 (669)
Q Consensus 270 ~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~ 324 (669)
.++|...++| |+||.|+.+|..++|.+|+ +.|++...+|.+|+|+|++.....
T Consensus 213 ~din~~t~~g-talheaalcgk~evvr~ll-~~gin~h~~n~~~qtaldil~d~~ 265 (854)
T KOG0507|consen 213 FDINYTTEDG-TALHEAALCGKAEVVRFLL-EIGINTHIKNQHGQTALDIIIDLQ 265 (854)
T ss_pred CCcccccccc-hhhhhHhhcCcchhhhHHH-hhccccccccccchHHHHHHHhcc
Confidence 4455443333 5666666666666666666 555566666666666666555433
No 50
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.88 E-value=2.9e-22 Score=232.83 Aligned_cols=253 Identities=17% Similarity=0.139 Sum_probs=178.7
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHh--CCccccccCCCCCcHHH-HHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHH
Q 005931 38 ASLNTALHLAARFGHVELVTEITKL--CPELVAAENEKLETPLH-EACCQGNHEVSAFLMEANPTVATKLNHESQSAFSL 114 (669)
Q Consensus 38 ~~g~T~Lh~Aa~~g~~e~vk~Ll~~--~~~~~~~~n~~g~TpLh-~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~ 114 (669)
..+.+.|+.||+.|+.+.|+.+++. +.+ ++..|..|.|||| .|+.+++.++++.|++.+. .+..|.||||.
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~-in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~ 88 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKKLN-INCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHA 88 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccccC-CCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHH
Confidence 4567889999999999999999987 545 6778889999999 8888889999999998876 47788999998
Q ss_pred HHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHH
Q 005931 115 ACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKL 194 (669)
Q Consensus 115 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~ 194 (669)
|+.. ..+.++.++....... .+ + .+. .+.. +.....+..|.||||+|+..|+.+++++
T Consensus 89 A~~~-~~~~v~~ll~~l~~~~--~~--~-~~~-------------~~~~---~~~~~~~~~G~TpLhlAa~~~~~eiVkl 146 (743)
T TIGR00870 89 ISLE-YVDAVEAILLHLLAAF--RK--S-GPL-------------ELAN---DQYTSEFTPGITALHLAAHRQNYEIVKL 146 (743)
T ss_pred HHhc-cHHHHHHHHHHHhhcc--cc--c-Cch-------------hhhc---cccccccCCCCcHHHHHHHhCCHHHHHH
Confidence 8873 3333333332211110 00 0 011 0000 0011224568889999999999999999
Q ss_pred HHhcCCcccccc-------------CCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcC------
Q 005931 195 LLNHNKDLALQY-------------NKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFD------ 255 (669)
Q Consensus 195 Ll~~g~~~~~~~-------------~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~------ 255 (669)
|+++|++++... ...|.||||.|+..|+.++++.|++ .|++++..|..|+||||+|+..+
T Consensus 147 LL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~-~gadin~~d~~g~T~Lh~A~~~~~~~~~~ 225 (743)
T TIGR00870 147 LLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSE-DPADILTADSLGNTLLHLLVMENEFKAEY 225 (743)
T ss_pred HHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhc-CCcchhhHhhhhhHHHHHHHhhhhhhHHH
Confidence 999888887531 1358999999999999999777765 56799999999999999999986
Q ss_pred ---CHHHHHHHHHhcCC-CCC----ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHH
Q 005931 256 ---KYNAFKFLAESFNT-CLF----HGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDII 320 (669)
Q Consensus 256 ---~~~iv~~Ll~~~~~-~~i----n~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a 320 (669)
...+.+++++.... ... +..|.+|.||||+|+..|+.+++++|++ .+.+........+.+.+++
T Consensus 226 ~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~-~~~~~kk~~a~~~~~~~~~ 297 (743)
T TIGR00870 226 EELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLA-IKYKQKKFVAWPNGQQLLS 297 (743)
T ss_pred HHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHH-HHHhcceeeccCcchHhHh
Confidence 23456666665332 222 5678999999999999999999999994 3223333333444444443
No 51
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.88 E-value=9.2e-23 Score=186.00 Aligned_cols=263 Identities=24% Similarity=0.254 Sum_probs=222.3
Q ss_pred HHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCH
Q 005931 8 NLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNH 87 (669)
Q Consensus 8 ~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~ 87 (669)
+++.++..|-.+--..+.. .+-.-++..|...+-.+.+.|+.++++.++..+++.+...+..|+.+++.|+-.|+.
T Consensus 34 ~~~~~~~m~~t~p~~~l~~----~~s~~~~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~ 109 (296)
T KOG0502|consen 34 ELFEQVEMGTTEPRCALTA----EISALRNALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSV 109 (296)
T ss_pred HHHHHhhccccchhHHHHH----HHHHHHHhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCc
Confidence 3666666666555555444 122334778888899999999999999999988887778888899999999999999
Q ss_pred HHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCc
Q 005931 88 EVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPR 167 (669)
Q Consensus 88 eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~ 167 (669)
..+..++.++...+.. +.-+.+|+.+++...+.+++..+.++.. +..|..|.|||.+|+..|+.+++++|++.+.+
T Consensus 110 ~k~sttltN~~rgnev-s~~p~s~~slsVhql~L~~~~~~~~n~V---N~~De~GfTpLiWAaa~G~i~vV~fLL~~GAd 185 (296)
T KOG0502|consen 110 DKVSTTLTNGARGNEV-SLMPWSPLSLSVHQLHLDVVDLLVNNKV---NACDEFGFTPLIWAAAKGHIPVVQFLLNSGAD 185 (296)
T ss_pred ceeeeeecccccCCcc-ccccCChhhHHHHHHHHHHHHHHhhccc---cCccccCchHhHHHHhcCchHHHHHHHHcCCC
Confidence 9999999988877654 7789999999999999999888776542 36788899999999999999999999999887
Q ss_pred ccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcH
Q 005931 168 FAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETV 247 (669)
Q Consensus 168 ~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~ 247 (669)
. ....+...|+|.+|++.|..++|++|+.++.+++.. |.+|.|||-+|++.++.++++.||.++ ++++..+..|.++
T Consensus 186 p-~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvy-DwNGgTpLlyAvrgnhvkcve~Ll~sG-Ad~t~e~dsGy~~ 262 (296)
T KOG0502|consen 186 P-DALGKYRESALSLATRGGYTDIVELLLTREVDVNVY-DWNGGTPLLYAVRGNHVKCVESLLNSG-ADVTQEDDSGYWI 262 (296)
T ss_pred h-hhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCccee-ccCCCceeeeeecCChHHHHHHHHhcC-CCcccccccCCcH
Confidence 5 666777889999999999999999999999999986 999999999999999999988888665 8899999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHH
Q 005931 248 FHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLH 284 (669)
Q Consensus 248 Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh 284 (669)
+..|+..|+. +++.+++. -.+.+.+|..-.||+|
T Consensus 263 mdlAValGyr-~Vqqvie~--h~lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 263 MDLAVALGYR-IVQQVIEK--HALKLCQDSEKRTPLH 296 (296)
T ss_pred HHHHHHhhhH-HHHHHHHH--HHHHHhhcccCCCCCC
Confidence 9999999988 77877775 3455667777777775
No 52
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.86 E-value=2e-20 Score=218.61 Aligned_cols=175 Identities=21% Similarity=0.258 Sum_probs=158.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHc
Q 005931 141 VESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAIN 220 (669)
Q Consensus 141 ~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~ 220 (669)
...++|+.|+..|+.++++.|++.+.+. +..|.+|.||||+|+..|+.+++++|+++|++++.. |.+|.||||.|+..
T Consensus 524 ~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~-n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~-d~~G~TpL~~A~~~ 601 (823)
T PLN03192 524 NMASNLLTVASTGNAALLEELLKAKLDP-DIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIR-DANGNTALWNAISA 601 (823)
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCc-CCCCCCHHHHHHHh
Confidence 3568999999999999999999998885 788999999999999999999999999999999876 99999999999999
Q ss_pred CCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 005931 221 GRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIK 300 (669)
Q Consensus 221 g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~ 300 (669)
|+.++++.|+... ...+ ...|.++||.|+.+|+.+++++|++. +.++|.+|.+|+||||+|+..|+.+++++|+
T Consensus 602 g~~~iv~~L~~~~-~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~--Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll- 675 (823)
T PLN03192 602 KHHKIFRILYHFA-SISD--PHAAGDLLCTAAKRNDLTAMKELLKQ--GLNVDSEDHQGATALQVAMAEDHVDMVRLLI- 675 (823)
T ss_pred CCHHHHHHHHhcC-cccC--cccCchHHHHHHHhCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHCCcHHHHHHHH-
Confidence 9999998887544 2222 35678999999999999999999996 7789999999999999999999999999999
Q ss_pred hcCcccccccCCC-CCHHHHHHHc
Q 005931 301 ETVLDIYCRNHKN-QTALDIIEQA 323 (669)
Q Consensus 301 ~~~~d~~~~n~~g-~T~L~~a~~~ 323 (669)
+.|+|++..|..| .||++++...
T Consensus 676 ~~GAdv~~~~~~g~~t~~~l~~~~ 699 (823)
T PLN03192 676 MNGADVDKANTDDDFSPTELRELL 699 (823)
T ss_pred HcCCCCCCCCCCCCCCHHHHHHHH
Confidence 7889999999998 9999887553
No 53
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.86 E-value=1.6e-20 Score=219.46 Aligned_cols=173 Identities=21% Similarity=0.310 Sum_probs=101.9
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHH
Q 005931 38 ASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACR 117 (669)
Q Consensus 38 ~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~ 117 (669)
..+.++||.||..|+.++++.|++.|.+ ++..|..|.||||+||..|+.+++++|+++|++++.. |.+|.||||.|+.
T Consensus 523 ~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d-~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~-d~~G~TpL~~A~~ 600 (823)
T PLN03192 523 PNMASNLLTVASTGNAALLEELLKAKLD-PDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIR-DANGNTALWNAIS 600 (823)
T ss_pred ccchhHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCc-CCCCCCHHHHHHH
Confidence 3445666666666666666666666666 5666666666666666666666666666666665443 6666666666666
Q ss_pred cCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHh
Q 005931 118 QGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLN 197 (669)
Q Consensus 118 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~ 197 (669)
.|+.+++++|++.+...+ ...+.++||.|+..|+.++++.|++++.+. +..|.+|.||||+|+..|+.+++++|++
T Consensus 601 ~g~~~iv~~L~~~~~~~~---~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadi-n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 676 (823)
T PLN03192 601 AKHHKIFRILYHFASISD---PHAAGDLLCTAAKRNDLTAMKELLKQGLNV-DSEDHQGATALQVAMAEDHVDMVRLLIM 676 (823)
T ss_pred hCCHHHHHHHHhcCcccC---cccCchHHHHHHHhCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 666666666665443322 122334555555555555555555555543 4455555555555555555555555555
Q ss_pred cCCccccccCCCC-ChHHHHH
Q 005931 198 HNKDLALQYNKDG-YTPLHLA 217 (669)
Q Consensus 198 ~g~~~~~~~~~~g-~tpLh~A 217 (669)
+|++++.. |.+| .+|+..+
T Consensus 677 ~GAdv~~~-~~~g~~t~~~l~ 696 (823)
T PLN03192 677 NGADVDKA-NTDDDFSPTELR 696 (823)
T ss_pred cCCCCCCC-CCCCCCCHHHHH
Confidence 55555544 4333 5555444
No 54
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.84 E-value=1.6e-20 Score=183.60 Aligned_cols=166 Identities=27% Similarity=0.318 Sum_probs=146.8
Q ss_pred cCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHc-----CCHHHHHHHHhcCCCCcccc-cC
Q 005931 169 AGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAIN-----GRVKILVAFLSSSPASFDRL-TT 242 (669)
Q Consensus 169 ~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~-----g~~e~v~~LL~~~~~~i~~~-d~ 242 (669)
.+..|.+|+|+|||++.+++.++|+.||+.|..-.-..|+-|+||+++|+.. .+.++|..|+..+ ++|.+ ..
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg--nVNaKAsQ 338 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG--DVNAKASQ 338 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc--Ccchhhhh
Confidence 3667999999999999999999999999998644444599999999998853 4567888888775 56665 46
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHH
Q 005931 243 YGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQ 322 (669)
Q Consensus 243 ~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~ 322 (669)
.|+|+|++|+.+|+.++++.|+.. ++++|.+|.+|.|+|++|+++|+.+++++||....+|....|.+|-|+|.+|..
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLac--gAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAle 416 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLAC--GADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALE 416 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHc--cCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHh
Confidence 899999999999999999999986 789999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHH
Q 005931 323 AGTNDDATSLKKLFKT 338 (669)
Q Consensus 323 ~~~~~~~~~l~~~l~~ 338 (669)
.|+.++.-.|...+..
T Consensus 417 agh~eIa~mlYa~~n~ 432 (452)
T KOG0514|consen 417 AGHREIAVMLYAHMNI 432 (452)
T ss_pred cCchHHHHHHHHHHHh
Confidence 9999988777655443
No 55
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.81 E-value=9.1e-20 Score=187.87 Aligned_cols=229 Identities=25% Similarity=0.308 Sum_probs=180.1
Q ss_pred HHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCC
Q 005931 7 QNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGN 86 (669)
Q Consensus 7 ~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~ 86 (669)
..++.|...||.+.+..++. .. ...+..+.+|.|+||-||.-.+.+||++|++.++. ++..|..|+||||.|+..|+
T Consensus 42 a~~l~A~~~~d~~ev~~ll~-~g-a~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~-Vn~~d~e~wtPlhaaascg~ 118 (527)
T KOG0505|consen 42 AVFLEACSRGDLEEVRKLLN-RG-ASPNLCNVDGLTALHQACIDDNLEMVKFLVENGAN-VNAQDNEGWTPLHAAASCGY 118 (527)
T ss_pred HHHHhccccccHHHHHHHhc-cC-CCccccCCccchhHHHHHhcccHHHHHHHHHhcCC-ccccccccCCcchhhccccc
Confidence 35889999999999999998 33 33478899999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcC----CHHHHHHHH
Q 005931 87 HEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRG----HTDIAREIL 162 (669)
Q Consensus 87 ~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g----~~~iv~~Ll 162 (669)
..++++|++.|+++... |.+|..|+..+...-..+++..-.... |.+ + -|++.- -.+-++..+
T Consensus 119 ~~i~~~li~~gA~~~av-Nsdg~~P~dl~e~ea~~~~l~~~~~r~----------gi~-i-ea~R~~~e~~ml~D~~q~l 185 (527)
T KOG0505|consen 119 LNIVEYLIQHGANLLAV-NSDGNMPYDLAEDEATLDVLETEMARQ----------GID-I-EAARKAEEQTMLDDARQWL 185 (527)
T ss_pred HHHHHHHHHhhhhhhhc-cCCCCCccccccCcchhHHHHHHHHHh----------ccc-H-HHHhhhhHHHHHHHHHHHH
Confidence 99999999999998765 889999988887666665555433221 111 1 111111 112223334
Q ss_pred hcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccC
Q 005931 163 EVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTT 242 (669)
Q Consensus 163 ~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~ 242 (669)
..+... ...+..|-|.||.|+.+|+.++.++|+++|.++... |.+|+||||.|+.-|..+.++ +|...+.+++..+.
T Consensus 186 ~~G~~~-d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~-D~dgWtPlHAAA~Wg~~~~~e-lL~~~ga~~d~~t~ 262 (527)
T KOG0505|consen 186 NAGAEL-DARHARGATALHVAAANGYTEVAALLLQAGYSVNIK-DYDGWTPLHAAAHWGQEDACE-LLVEHGADMDAKTK 262 (527)
T ss_pred hccccc-cccccccchHHHHHHhhhHHHHHHHHHHhccCcccc-cccCCCcccHHHHhhhHhHHH-HHHHhhcccchhhh
Confidence 444443 455555899999999999999999999999998886 999999999999999998876 66666688898899
Q ss_pred CCCcHHHHHHHc
Q 005931 243 YGETVFHLAVRF 254 (669)
Q Consensus 243 ~g~t~Lh~Av~~ 254 (669)
.|+||+-+|..-
T Consensus 263 ~g~~p~dv~dee 274 (527)
T KOG0505|consen 263 MGETPLDVADEE 274 (527)
T ss_pred cCCCCccchhhh
Confidence 999998888653
No 56
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.80 E-value=2e-19 Score=185.42 Aligned_cols=232 Identities=21% Similarity=0.246 Sum_probs=148.2
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHH
Q 005931 43 ALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLD 122 (669)
Q Consensus 43 ~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e 122 (669)
.+.-||..|..+-|+.|+..+.. ++..|.+|.|+||-||...+.+||++|+++|++++.. +..|+||||.|+..|+..
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~-~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~-d~e~wtPlhaaascg~~~ 120 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGAS-PNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQ-DNEGWTPLHAAASCGYLN 120 (527)
T ss_pred HHHhccccccHHHHHHHhccCCC-ccccCCccchhHHHHHhcccHHHHHHHHHhcCCcccc-ccccCCcchhhcccccHH
Confidence 45556667777777777777665 4666777777777777777777777777777776554 666666666666666666
Q ss_pred HHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHh-cCCc
Q 005931 123 VVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLN-HNKD 201 (669)
Q Consensus 123 iv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~-~g~~ 201 (669)
++++|++++.+.. ..+..|..|+ ..+..--..++...-.. .|.+
T Consensus 121 i~~~li~~gA~~~-avNsdg~~P~----------------------------------dl~e~ea~~~~l~~~~~r~gi~ 165 (527)
T KOG0505|consen 121 IVEYLIQHGANLL-AVNSDGNMPY----------------------------------DLAEDEATLDVLETEMARQGID 165 (527)
T ss_pred HHHHHHHhhhhhh-hccCCCCCcc----------------------------------ccccCcchhHHHHHHHHHhccc
Confidence 6666666665443 2233333333 33322222222221111 1111
Q ss_pred cccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCc
Q 005931 202 LALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNT 281 (669)
Q Consensus 202 ~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~T 281 (669)
+...+...-.+-|+ ++ ...+. .+...+..+..|.|.||+|+.+|..++.++|++. +..++.+|.+|+|
T Consensus 166 iea~R~~~e~~ml~--------D~-~q~l~-~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~a--g~~~~~~D~dgWt 233 (527)
T KOG0505|consen 166 IEAARKAEEQTMLD--------DA-RQWLN-AGAELDARHARGATALHVAAANGYTEVAALLLQA--GYSVNIKDYDGWT 233 (527)
T ss_pred HHHHhhhhHHHHHH--------HH-HHHHh-ccccccccccccchHHHHHHhhhHHHHHHHHHHh--ccCcccccccCCC
Confidence 11111111111121 11 22333 5566677776789999999999999999999986 5677888999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHHcC
Q 005931 282 VLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQAG 324 (669)
Q Consensus 282 pLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~ 324 (669)
|||.|+..|..+++++|+ ..|++.+.++..|.||++++....
T Consensus 234 PlHAAA~Wg~~~~~elL~-~~ga~~d~~t~~g~~p~dv~dee~ 275 (527)
T KOG0505|consen 234 PLHAAAHWGQEDACELLV-EHGADMDAKTKMGETPLDVADEEE 275 (527)
T ss_pred cccHHHHhhhHhHHHHHH-HhhcccchhhhcCCCCccchhhhh
Confidence 999999999999999777 778899999999999999887644
No 57
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.79 E-value=2.9e-19 Score=174.93 Aligned_cols=196 Identities=21% Similarity=0.283 Sum_probs=145.4
Q ss_pred ChHHHH----HHHc-CCHHHHHHHHHh----CCc----cccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCC
Q 005931 41 NTALHL----AARF-GHVELVTEITKL----CPE----LVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHE 107 (669)
Q Consensus 41 ~T~Lh~----Aa~~-g~~e~vk~Ll~~----~~~----~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~ 107 (669)
.|.+|. |+.. -+.+.|+-.+.. .++ .+|..|.+|+|+||||+.++|.++|+.||+.|.......|..
T Consensus 222 ~tv~~eW~~~a~~s~a~pe~V~~~l~~f~als~~lL~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrA 301 (452)
T KOG0514|consen 222 ATVQHEWFTNSSTSSSDPEQVEDYLAYFEALSPPLLEYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRA 301 (452)
T ss_pred HHHHHHHHHhcccCCCCHHHHHHHHHHHHhcChHHHHHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccc
Confidence 455553 3332 356666544432 222 356778888888888888888888888888888777777888
Q ss_pred CCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcC
Q 005931 108 SQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIG 187 (669)
Q Consensus 108 g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g 187 (669)
|.||+++|+...- + ...+.++|..|...+.. +......|.|+|.+|+.+|
T Consensus 302 GYtpiMLaALA~l--------k---------------------~~~d~~vV~~LF~mgnV-NaKAsQ~gQTALMLAVSHG 351 (452)
T KOG0514|consen 302 GYTPVMLAALAKL--------K---------------------QPADRTVVERLFKMGDV-NAKASQHGQTALMLAVSHG 351 (452)
T ss_pred cccHHHHHHHHhh--------c---------------------chhhHHHHHHHHhccCc-chhhhhhcchhhhhhhhcC
Confidence 8888887754210 0 01123555666655433 2333567889999999999
Q ss_pred CHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 005931 188 NVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESF 267 (669)
Q Consensus 188 ~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~ 267 (669)
+.++|+.||..|+|++.+ |.+|.|+|++|+.+||.|+++.||.....++...|.+|.|+|.+|...|+.+|.-+|+.+.
T Consensus 352 r~d~vk~LLacgAdVNiQ-DdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~~ 430 (452)
T KOG0514|consen 352 RVDMVKALLACGADVNIQ-DDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAHM 430 (452)
T ss_pred cHHHHHHHHHccCCCccc-cCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHHHH
Confidence 999999999999999887 8899999999999999999988888888888888888999999999999988888887653
No 58
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.76 E-value=6e-18 Score=149.16 Aligned_cols=146 Identities=25% Similarity=0.312 Sum_probs=131.4
Q ss_pred hHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCH
Q 005931 178 SPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKY 257 (669)
Q Consensus 178 t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~ 257 (669)
-.+.+|+..+.+..|+.||+..++....+|.+|+||||-|+.+|+.+|+..|+..+ ++.+.+...|+||||-||+.++.
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~g-An~~a~T~~GWTPLhSAckWnN~ 143 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSG-ANKEAKTNEGWTPLHSACKWNNF 143 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHcc-CCcccccccCccchhhhhcccch
Confidence 45678999999999999999998877778999999999999999999988887654 88999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCH-HHHHHHHHhcCcccccccCCCCCHHHHHHHcCCC
Q 005931 258 NAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNY-QFVEYIIKETVLDIYCRNHKNQTALDIIEQAGTN 326 (669)
Q Consensus 258 ~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~-~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~~~ 326 (669)
+++.+|+++ ++++|+......||||+||...+. ..+++|+...++++..+++.+.||+++|.+.+-.
T Consensus 144 ~va~~LLqh--gaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s 211 (228)
T KOG0512|consen 144 EVAGRLLQH--GADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMS 211 (228)
T ss_pred hHHHHHHhc--cCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhh
Confidence 999999997 778999999999999999988754 6788899899999999999999999999987643
No 59
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.76 E-value=6.6e-18 Score=148.88 Aligned_cols=141 Identities=20% Similarity=0.218 Sum_probs=67.4
Q ss_pred HHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHH
Q 005931 44 LHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDV 123 (669)
Q Consensus 44 Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~ei 123 (669)
+.+|+..+....|+.|++..++.++.+|.+|.||||.|+.+|+.+||+.|+..|++...+ ...|.||||.||...+.++
T Consensus 67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~-T~~GWTPLhSAckWnN~~v 145 (228)
T KOG0512|consen 67 LLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAK-TNEGWTPLHSACKWNNFEV 145 (228)
T ss_pred HHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccc-cccCccchhhhhcccchhH
Confidence 444555555555555555555555555555555555555555555555555555554433 4455555555555555555
Q ss_pred HHHHHcCCCccccccCCCCCcHHHHHHHcCC-HHHHHHHHhcCCcccCCCCCCCChHHHHHHhc
Q 005931 124 VKLLINQSWLMEFEEDSVESTPIYLAISRGH-TDIAREILEVRPRFAGKTDKNGFSPLHYASSI 186 (669)
Q Consensus 124 v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~-~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~ 186 (669)
+..|++++++++. ......||||.|+...+ ...+.+|+......+...+..+.||+..|-+.
T Consensus 146 a~~LLqhgaDVnA-~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT 208 (228)
T KOG0512|consen 146 AGRLLQHGADVNA-QTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRT 208 (228)
T ss_pred HHHHHhccCcccc-cccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHh
Confidence 5555555555442 22223455555544333 23333333333333334444455555555443
No 60
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.76 E-value=9.4e-18 Score=157.43 Aligned_cols=142 Identities=14% Similarity=0.171 Sum_probs=113.1
Q ss_pred CCCCCCChHHHHHHhcCCH----HHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHH--HHHHhcCCCCccccc-CC
Q 005931 171 KTDKNGFSPLHYASSIGNV----NMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKIL--VAFLSSSPASFDRLT-TY 243 (669)
Q Consensus 171 ~~d~~g~t~Lh~Aa~~g~~----eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v--~~LL~~~~~~i~~~d-~~ 243 (669)
..+.++.++||.||+.|+. +++++|.+.+..++.. |.+|+||||+|+..|+.+.+ ..+|...+.+++.++ ..
T Consensus 15 ~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~-d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~ 93 (166)
T PHA02743 15 EIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRY-DHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGT 93 (166)
T ss_pred hhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhcc-CCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCC
Confidence 3456677888999988887 5666777888877754 88899999999998886652 234445568888887 58
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCC
Q 005931 244 GETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQT 315 (669)
Q Consensus 244 g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T 315 (669)
|+||||+|+..++.+++++|++. .+.+++.+|..|.||||+|+..++.+++++|+ ..|++++.++..|..
T Consensus 94 g~TpLh~A~~~g~~~iv~~Ll~~-~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll-~~ga~~~~~~~~~~~ 163 (166)
T PHA02743 94 GNTLLHIAASTKNYELAEWLCRQ-LGVNLGAINYQHETAYHIAYKMRDRRMMEILR-ANGAVCDDPLSIGLS 163 (166)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhc-cCCCccCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcccCCcc
Confidence 99999999999999999999852 26677888999999999999999999999998 677899888877753
No 61
>PHA02741 hypothetical protein; Provisional
Probab=99.75 E-value=1.5e-17 Score=156.74 Aligned_cols=124 Identities=22% Similarity=0.296 Sum_probs=64.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhc-----CCCCcccccCCCCcHHHHHHHcCC----HHHHHHHHHhcCCCCCccCCC
Q 005931 207 NKDGYTPLHLAAINGRVKILVAFLSS-----SPASFDRLTTYGETVFHLAVRFDK----YNAFKFLAESFNTCLFHGQDQ 277 (669)
Q Consensus 207 ~~~g~tpLh~Aa~~g~~e~v~~LL~~-----~~~~i~~~d~~g~t~Lh~Av~~~~----~~iv~~Ll~~~~~~~in~~D~ 277 (669)
+..|.||||+|+..|+.++++.|+.. .+.+++.+|..|+||||+|+..++ .+++++|++. +.++|.+|.
T Consensus 18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~--gadin~~~~ 95 (169)
T PHA02741 18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL--GADINAQEM 95 (169)
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc--CCCCCCCCc
Confidence 34445555555555555544444321 123445555555555555555555 3455555553 444555553
Q ss_pred -CCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHHcCCCchHHHH
Q 005931 278 -FGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQAGTNDDATSL 332 (669)
Q Consensus 278 -~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~~~~~~~~l 332 (669)
+|+||||+|+..++.+++++|++..+++++.+|..|+|||++|...++.+....|
T Consensus 96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L 151 (169)
T PHA02741 96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQIL 151 (169)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHH
Confidence 5666666666666666666665444556666666666666666655544433333
No 62
>PHA02741 hypothetical protein; Provisional
Probab=99.75 E-value=3e-17 Score=154.77 Aligned_cols=132 Identities=18% Similarity=0.268 Sum_probs=101.0
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHh------CCccccccCCCCCcHHHHHHHcCC----HHHHHHHHhhCCccc
Q 005931 32 ILLQRDASLNTALHLAARFGHVELVTEITKL------CPELVAAENEKLETPLHEACCQGN----HEVSAFLMEANPTVA 101 (669)
Q Consensus 32 ~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~------~~~~~~~~n~~g~TpLh~Aa~~g~----~eivk~Ll~~~~~~~ 101 (669)
.++.+|..|.|+||+||..|+.++++.|+.. +.+ ++.+|..|+||||+|+..|+ .+++++|++.|++++
T Consensus 13 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~-in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin 91 (169)
T PHA02741 13 MIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAA-LNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADIN 91 (169)
T ss_pred HhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhh-hhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCC
Confidence 4556788899999999999999999988653 233 67888889999999999888 578888888888876
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHcC-CCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 005931 102 TKLNHESQSAFSLACRQGHLDVVKLLINQ-SWLMEFEEDSVESTPIYLAISRGHTDIAREILEVR 165 (669)
Q Consensus 102 ~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~-~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~ 165 (669)
...+..|.||||+|+..++.+++++|++. +.+.+ ..+..|.||||.|+..++.++++.|++..
T Consensus 92 ~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~-~~n~~g~tpL~~A~~~~~~~iv~~L~~~~ 155 (169)
T PHA02741 92 AQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLH-FCNADNKSPFELAIDNEDVAMMQILREIV 155 (169)
T ss_pred CCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-cCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Confidence 55224788888888888888888888863 55544 45666777777777777777777777654
No 63
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.74 E-value=3.6e-17 Score=165.40 Aligned_cols=157 Identities=17% Similarity=0.191 Sum_probs=128.7
Q ss_pred hcccCCCCCh-HHHHHHHcCCHHHHHHHHHhCCcccccc----CCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCC
Q 005931 33 LLQRDASLNT-ALHLAARFGHVELVTEITKLCPELVAAE----NEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHE 107 (669)
Q Consensus 33 l~~~d~~g~T-~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~----n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~ 107 (669)
+..+|..|.| +||.|+..|+.+++++|++.|++ ++.+ +..|.||||+|+..|+.+++++|+++|+++....+..
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAd-iN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~ 103 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGAD-PEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEA 103 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCC-ccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCC
Confidence 4566777654 57777778999999999999998 5665 4589999999999999999999999999987654667
Q ss_pred CCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcC
Q 005931 108 SQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIG 187 (669)
Q Consensus 108 g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g 187 (669)
|.||||.|+..++.+++++|++.+++.+ ..+..|.||||.|+..++.+++..+.. ...+..+.+|++++ +
T Consensus 104 g~TpLh~Aa~~~~~eivklLL~~GAdin-~kd~~G~TpL~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~---~ 173 (300)
T PHA02884 104 KITPLYISVLHGCLKCLEILLSYGADIN-IQTNDMVTPIELALMICNNFLAFMICD------NEISNFYKHPKKIL---I 173 (300)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHhCChhHHHHhcC------CcccccccChhhhh---c
Confidence 9999999999999999999999998877 467778999999999888887755542 22456677888875 4
Q ss_pred CHHHHHHHHhcCC
Q 005931 188 NVNMTKLLLNHNK 200 (669)
Q Consensus 188 ~~eiv~~Ll~~g~ 200 (669)
+.+++++|+.++.
T Consensus 174 n~ei~~~Lish~v 186 (300)
T PHA02884 174 NFDILKILVSHFI 186 (300)
T ss_pred cHHHHHHHHHHHH
Confidence 6889999988866
No 64
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.72 E-value=1.2e-16 Score=150.05 Aligned_cols=138 Identities=18% Similarity=0.216 Sum_probs=113.0
Q ss_pred CCCCCcHHHHHHHcCCH----HHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHH---HHHHHHhcCCccccccC-CCC
Q 005931 139 DSVESTPIYLAISRGHT----DIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVN---MTKLLLNHNKDLALQYN-KDG 210 (669)
Q Consensus 139 ~~~~~t~L~~A~~~g~~----~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~e---iv~~Ll~~g~~~~~~~~-~~g 210 (669)
+..+.++||.|++.|+. +++++|++.+... +..|..|+||||+|+..|+.+ ++++|+++|++++.. + ..|
T Consensus 17 ~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~-~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~-d~~~g 94 (166)
T PHA02743 17 DEDEQNTFLRICRTGNIYELMEVAPFISGDGHLL-HRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINAR-ELGTG 94 (166)
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhh-hccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCC-CCCCC
Confidence 34466788888888887 4455556655543 667889999999999988755 478999999999876 5 589
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCC
Q 005931 211 YTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGN 280 (669)
Q Consensus 211 ~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~ 280 (669)
.||||+|+..|+.++++.|+...+.+++..+..|+||||+|+..++.+++++|++. +.+++.++..|.
T Consensus 95 ~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~--ga~~~~~~~~~~ 162 (166)
T PHA02743 95 NTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRAN--GAVCDDPLSIGL 162 (166)
T ss_pred CcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcccCCc
Confidence 99999999999999998888767789999999999999999999999999999986 567777776664
No 65
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.69 E-value=6.4e-16 Score=156.39 Aligned_cols=85 Identities=26% Similarity=0.242 Sum_probs=37.9
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHc
Q 005931 175 NGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRF 254 (669)
Q Consensus 175 ~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~ 254 (669)
.|.||||+|+..|+.+++++|+++|++++...+..|.||||.|+..|+.++++.|+.. +++++.+|..|.||||+|++.
T Consensus 69 ~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~-GAdin~kd~~G~TpL~~A~~~ 147 (300)
T PHA02884 69 SKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSY-GADINIQTNDMVTPIELALMI 147 (300)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHh
Confidence 4444444444444444444444444444432223344444444444444444333322 244444444444444444444
Q ss_pred CCHHHH
Q 005931 255 DKYNAF 260 (669)
Q Consensus 255 ~~~~iv 260 (669)
++.+++
T Consensus 148 ~~~~~~ 153 (300)
T PHA02884 148 CNNFLA 153 (300)
T ss_pred CChhHH
Confidence 444443
No 66
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.69 E-value=1.6e-16 Score=147.59 Aligned_cols=132 Identities=20% Similarity=0.143 Sum_probs=81.3
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHhC------CccccccCCCCCcHHHHHHHcCCH---HHHHHHHhhCCccc
Q 005931 31 RILLQRDASLNTALHLAARFGHVELVTEITKLC------PELVAAENEKLETPLHEACCQGNH---EVSAFLMEANPTVA 101 (669)
Q Consensus 31 ~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~------~~~~~~~n~~g~TpLh~Aa~~g~~---eivk~Ll~~~~~~~ 101 (669)
...+++|..|.||||+||+.|+.+ +.+...+ +..+...|..|.||||+|+..|+. +++++|++.|++++
T Consensus 8 ~~~~~~d~~g~tpLh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin 85 (154)
T PHA02736 8 IFASEPDIEGENILHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADIN 85 (154)
T ss_pred hHHHhcCCCCCCHHHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcc
Confidence 345566888888888888888732 2222111 122445677788888888888776 45777888777766
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHcC-CCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 005931 102 TKLNHESQSAFSLACRQGHLDVVKLLINQ-SWLMEFEEDSVESTPIYLAISRGHTDIAREILEVR 165 (669)
Q Consensus 102 ~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~-~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~ 165 (669)
...+..|.||||+|+..++.+++++|+++ +.+.+ ..+..|.||||+|+..|+.++++.|++.+
T Consensus 86 ~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n-~~~~~g~tpL~~A~~~~~~~i~~~Ll~~g 149 (154)
T PHA02736 86 GKERVFGNTPLHIAVYTQNYELATWLCNQPGVNME-ILNYAFKTPYYVACERHDAKMMNILRAKG 149 (154)
T ss_pred ccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc-cccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 54224677777777777777777777753 43332 33444555555555555555555555443
No 67
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.68 E-value=2.3e-16 Score=146.50 Aligned_cols=135 Identities=16% Similarity=0.151 Sum_probs=97.7
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhhC------CccccccCCCCCcHHHHHHHcCCHH---HHHHHHcCCCccccc
Q 005931 67 VAAENEKLETPLHEACCQGNHEVSAFLMEAN------PTVATKLNHESQSAFSLACRQGHLD---VVKLLINQSWLMEFE 137 (669)
Q Consensus 67 ~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~------~~~~~~~~~~g~tpL~~A~~~g~~e---iv~~Ll~~~~~~~~~ 137 (669)
.+.+|..|.||||+|++.|+. ++++...+ .......|..|.||||+|+..|+.+ ++++|++.+.+.+..
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~ 87 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK 87 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc
Confidence 456788899999999999984 33333221 1122334778889999888888764 577888888776633
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccc
Q 005931 138 EDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLA 203 (669)
Q Consensus 138 ~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~ 203 (669)
.+..|.||||+|+..++.+++++|+.......+..|..|.||||+|+..|+.+++++|+++|++..
T Consensus 88 ~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 88 ERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 334688888888888888888888875333346777888888888888888888888888877653
No 68
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.66 E-value=1.2e-15 Score=165.00 Aligned_cols=212 Identities=24% Similarity=0.216 Sum_probs=164.7
Q ss_pred HHHHHHHHhCCHHHHHHHHcCcc-------hhhhcccCCCCChHHHHHHHc---CCHHHHHHHHHhCCccccc----cCC
Q 005931 7 QNLSEAIVRNDKQALINLVGCSN-------KRILLQRDASLNTALHLAARF---GHVELVTEITKLCPELVAA----ENE 72 (669)
Q Consensus 7 ~~L~~Ai~~gd~~~l~~ll~~~~-------~~~l~~~d~~g~T~Lh~Aa~~---g~~e~vk~Ll~~~~~~~~~----~n~ 72 (669)
+.++.+..+|+++.+..+++... --.+++|...|.|+||.|..+ ++.++++.|++..|.+++. ...
T Consensus 103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY 182 (782)
T KOG3676|consen 103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY 182 (782)
T ss_pred hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence 56888999999999998887331 124677788999999999984 5579999999998876554 346
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHc
Q 005931 73 KLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISR 152 (669)
Q Consensus 73 ~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~ 152 (669)
.|+||||+|+.+.+.++|++|++.|+++....-.. ++.+-..+... ...+.. ..-..|..||..|+..
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~----FF~~~dqk~~r-------k~T~Y~-G~~YfGEyPLSfAAC~ 250 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGA----FFCPDDQKASR-------KSTNYT-GYFYFGEYPLSFAACT 250 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhcc----ccCcccccccc-------cccCCc-ceeeeccCchHHHHHc
Confidence 79999999999999999999999999986541110 00000000000 000000 1123578999999999
Q ss_pred CCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCc--cccccCCCCChHHHHHHHcCCHHHHHHHH
Q 005931 153 GHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKD--LALQYNKDGYTPLHLAAINGRVKILVAFL 230 (669)
Q Consensus 153 g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~--~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL 230 (669)
++.|++++|++++.+. +.+|.+|+|.||..+..-..++-++++++|++ ... .|..|.|||.+|++-|+.++.+.++
T Consensus 251 nq~eivrlLl~~gAd~-~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v-~N~qgLTPLtLAaklGk~emf~~il 328 (782)
T KOG3676|consen 251 NQPEIVRLLLAHGADP-NAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHV-RNNQGLTPLTLAAKLGKKEMFQHIL 328 (782)
T ss_pred CCHHHHHHHHhcCCCC-CccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccc-cccCCCChHHHHHHhhhHHHHHHHH
Confidence 9999999999988775 88999999999999999889999999999998 544 4999999999999999999999999
Q ss_pred hc
Q 005931 231 SS 232 (669)
Q Consensus 231 ~~ 232 (669)
+.
T Consensus 329 e~ 330 (782)
T KOG3676|consen 329 ER 330 (782)
T ss_pred Hh
Confidence 87
No 69
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.66 E-value=5.7e-14 Score=152.25 Aligned_cols=212 Identities=22% Similarity=0.306 Sum_probs=131.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHcCC---------CccccccCCCCCcHHHHHHHc---CCHHHHHHHHhcCCcccCCC---
Q 005931 108 SQSAFSLACRQGHLDVVKLLINQS---------WLMEFEEDSVESTPIYLAISR---GHTDIAREILEVRPRFAGKT--- 172 (669)
Q Consensus 108 g~tpL~~A~~~g~~eiv~~Ll~~~---------~~~~~~~~~~~~t~L~~A~~~---g~~~iv~~Ll~~~~~~~~~~--- 172 (669)
.+.++..|...+..+....|+... ++.+ .+...|.|.||.|..+ ++.++++.|++..|.+.+..
T Consensus 101 d~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~-~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~ 179 (782)
T KOG3676|consen 101 DRDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLN-ERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTS 179 (782)
T ss_pred chhhhhhccccccHHHHhccchhhhhhhhhhhhhccc-cccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhh
Confidence 336777777777777777776554 2222 3466789999999874 45688999999888766543
Q ss_pred -CCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHH
Q 005931 173 -DKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLA 251 (669)
Q Consensus 173 -d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~A 251 (669)
...|.||||.|+.+.+.++|++|++.|+|++.+.-..-..|=.. +.++ ...+..-.-..|+.||..|
T Consensus 180 eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dq--k~~r----------k~T~Y~G~~YfGEyPLSfA 247 (782)
T KOG3676|consen 180 EEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQ--KASR----------KSTNYTGYFYFGEYPLSFA 247 (782)
T ss_pred HhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccc--cccc----------cccCCcceeeeccCchHHH
Confidence 34699999999999999999999999999886421110000000 0000 0000111122466666666
Q ss_pred HHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcc--cccccCCCCCHHHHHHHcCCCchH
Q 005931 252 VRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLD--IYCRNHKNQTALDIIEQAGTNDDA 329 (669)
Q Consensus 252 v~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d--~~~~n~~g~T~L~~a~~~~~~~~~ 329 (669)
+-.++.+++++|+++ +++++.+|..|||.||..+..-..++.++++ ..|++ ...+|+.|.|||.+|++.|..+..
T Consensus 248 AC~nq~eivrlLl~~--gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L-~~ga~~l~~v~N~qgLTPLtLAaklGk~emf 324 (782)
T KOG3676|consen 248 ACTNQPEIVRLLLAH--GADPNAQDSNGNTVLHMLVIHFVTEMYDLAL-ELGANALEHVRNNQGLTPLTLAAKLGKKEMF 324 (782)
T ss_pred HHcCCHHHHHHHHhc--CCCCCccccCCChHHHHHHHHHHHHHHHHHH-hcCCCccccccccCCCChHHHHHHhhhHHHH
Confidence 666666666666664 5566666666666666666666666666666 44445 556666666666666666665555
Q ss_pred HHHHHH
Q 005931 330 TSLKKL 335 (669)
Q Consensus 330 ~~l~~~ 335 (669)
+.+++.
T Consensus 325 ~~ile~ 330 (782)
T KOG3676|consen 325 QHILER 330 (782)
T ss_pred HHHHHh
Confidence 554444
No 70
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.62 E-value=6.8e-16 Score=146.64 Aligned_cols=128 Identities=26% Similarity=0.315 Sum_probs=91.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHH
Q 005931 207 NKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLA 286 (669)
Q Consensus 207 ~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A 286 (669)
|..|.+|||+|++.|+..+++.||..+ +.+|..+....||||+|+.+|+.++++.|++. ..++|+.+..|+||||+|
T Consensus 31 ddhgfsplhwaakegh~aivemll~rg-arvn~tnmgddtplhlaaahghrdivqkll~~--kadvnavnehgntplhya 107 (448)
T KOG0195|consen 31 DDHGFSPLHWAAKEGHVAIVEMLLSRG-ARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSR--KADVNAVNEHGNTPLHYA 107 (448)
T ss_pred cccCcchhhhhhhcccHHHHHHHHhcc-cccccccCCCCcchhhhhhcccHHHHHHHHHH--hcccchhhccCCCchhhh
Confidence 556666666666666666655555433 55666666666677777777777777766664 567888889999999999
Q ss_pred HHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHHcCCCchHHHHHHHHHHhCCC
Q 005931 287 VLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQAGTNDDATSLKKLFKTAGNI 342 (669)
Q Consensus 287 ~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~~~~~~~~l~~~l~~~~~~ 342 (669)
|-.|+..+++-|+ ..|+.++..|++|.|||+.|. ......++++.+..|..
T Consensus 108 cfwgydqiaedli-~~ga~v~icnk~g~tpldkak----p~l~~~l~e~aek~gq~ 158 (448)
T KOG0195|consen 108 CFWGYDQIAEDLI-SCGAAVNICNKKGMTPLDKAK----PMLKNTLLEIAEKHGQS 158 (448)
T ss_pred hhhcHHHHHHHHH-hccceeeecccCCCCchhhhc----hHHHHHHHHHHHHhCCC
Confidence 9999989999888 788899999999999998763 23344566666666643
No 71
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.60 E-value=6.1e-16 Score=147.00 Aligned_cols=138 Identities=21% Similarity=0.210 Sum_probs=124.6
Q ss_pred HHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHH
Q 005931 9 LSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHE 88 (669)
Q Consensus 9 L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~e 88 (669)
+|--+++|+--.++..++ +....++.-|..|.+|||+||+.||..+|+.|+..|+. ++..|...+||||+|+..|+.+
T Consensus 4 if~wcregna~qvrlwld-~tehdln~gddhgfsplhwaakegh~aivemll~rgar-vn~tnmgddtplhlaaahghrd 81 (448)
T KOG0195|consen 4 IFGWCREGNAFQVRLWLD-DTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGAR-VNSTNMGDDTPLHLAAAHGHRD 81 (448)
T ss_pred hhhhhhcCCeEEEEEEec-CcccccccccccCcchhhhhhhcccHHHHHHHHhcccc-cccccCCCCcchhhhhhcccHH
Confidence 677788888877777777 56677888899999999999999999999999999999 7889999999999999999999
Q ss_pred HHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHH
Q 005931 89 VSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAI 150 (669)
Q Consensus 89 ivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~ 150 (669)
||+.|++..++++.. |..|.||||+||..|...+.+-|+..++..+ ..++.|.|||..|-
T Consensus 82 ivqkll~~kadvnav-nehgntplhyacfwgydqiaedli~~ga~v~-icnk~g~tpldkak 141 (448)
T KOG0195|consen 82 IVQKLLSRKADVNAV-NEHGNTPLHYACFWGYDQIAEDLISCGAAVN-ICNKKGMTPLDKAK 141 (448)
T ss_pred HHHHHHHHhcccchh-hccCCCchhhhhhhcHHHHHHHHHhccceee-ecccCCCCchhhhc
Confidence 999999999998776 9999999999999999999999999998876 56777999998763
No 72
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.53 E-value=6.5e-14 Score=116.92 Aligned_cols=89 Identities=35% Similarity=0.490 Sum_probs=70.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHH
Q 005931 214 LHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQ 293 (669)
Q Consensus 214 Lh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~ 293 (669)
||.|++.|+.++++.|+... .+++. |+||||+|+.+|+.+++++|++. +.+++.+|..|+||||+|+..++.+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~-~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~ 73 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKG-ADINL----GNTALHYAAENGNLEIVKLLLEN--GADINSQDKNGNTALHYAAENGNLE 73 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTT-STTTS----SSBHHHHHHHTTTHHHHHHHHHT--TTCTT-BSTTSSBHHHHHHHTTHHH
T ss_pred CHHHHHcCCHHHHHHHHHCc-CCCCC----CCCHHHHHHHcCCHHHHHHHHHh--cccccccCCCCCCHHHHHHHcCCHH
Confidence 67888888888888888743 45554 78888888888888888888885 5677888889999999999999999
Q ss_pred HHHHHHHhcCccccccc
Q 005931 294 FVEYIIKETVLDIYCRN 310 (669)
Q Consensus 294 iv~~Ll~~~~~d~~~~n 310 (669)
++++|+ +.|++++.+|
T Consensus 74 ~~~~Ll-~~g~~~~~~n 89 (89)
T PF12796_consen 74 IVKLLL-EHGADVNIRN 89 (89)
T ss_dssp HHHHHH-HTTT-TTSS-
T ss_pred HHHHHH-HcCCCCCCcC
Confidence 999999 5588888775
No 73
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.53 E-value=1.8e-13 Score=121.43 Aligned_cols=123 Identities=34% Similarity=0.529 Sum_probs=90.5
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHH
Q 005931 36 RDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLA 115 (669)
Q Consensus 36 ~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A 115 (669)
+|..|.||||.|+..|+.+++++|++.+.+ .+..+..|.||||.|+..++.+++++|++.++..... +..+.||+|.|
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~-~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~-~~~~~~~l~~a 80 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNAR-DKDGNTPLHLA 80 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCCCCHHHHH
Confidence 456788888888888888888888888776 3677778888888888888888888888887655433 56777888888
Q ss_pred HHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHH
Q 005931 116 CRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREI 161 (669)
Q Consensus 116 ~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~L 161 (669)
+..++.+++++|++.+...+ ..+..+.||++.|+..++.+++++|
T Consensus 81 ~~~~~~~~~~~L~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 81 ARNGNLDVVKLLLKHGADVN-ARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred HHcCcHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 88888888888777664433 3445566677777777666666655
No 74
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.52 E-value=2.7e-13 Score=120.25 Aligned_cols=124 Identities=35% Similarity=0.547 Sum_probs=95.7
Q ss_pred CCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHH
Q 005931 172 TDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLA 251 (669)
Q Consensus 172 ~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~A 251 (669)
.|.+|.||||+|+..++.+++++|++.+.+.... +..|.+|+|.|+..++.++++.++... ..++..+..|.||+|+|
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~-~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~~l~~a 80 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAK-DNDGRTPLHLAAKNGHLEIVKLLLEKG-ADVNARDKDGNTPLHLA 80 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcc-CCCCCcHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHH
Confidence 3466788888888888888888888888776443 777888888888888888877777655 35666777788888888
Q ss_pred HHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHH
Q 005931 252 VRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYII 299 (669)
Q Consensus 252 v~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll 299 (669)
+..++.+++++|++. +..++..|..|.||+|+|...++.+++++|+
T Consensus 81 ~~~~~~~~~~~L~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 81 ARNGNLDVVKLLLKH--GADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HHcCcHHHHHHHHHc--CCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 888888888888875 3456667788888888888888888887764
No 75
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.51 E-value=8.4e-14 Score=116.26 Aligned_cols=85 Identities=27% Similarity=0.466 Sum_probs=50.1
Q ss_pred HHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHH
Q 005931 44 LHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDV 123 (669)
Q Consensus 44 Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~ei 123 (669)
||+||+.|+.+++++|++.+.+. +. |+||||+|+..|+.+++++|++.|+++... +..|.||||+|+..|+.++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~-~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~ 74 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADI-NL----GNTALHYAAENGNLEIVKLLLENGADINSQ-DKNGNTALHYAAENGNLEI 74 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTT-TS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-B-STTSSBHHHHHHHTTHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCC-CC----CCCHHHHHHHcCCHHHHHHHHHhccccccc-CCCCCCHHHHHHHcCCHHH
Confidence 56666666666666666655442 11 556666666666666666666666655443 5566666666666666666
Q ss_pred HHHHHcCCCcc
Q 005931 124 VKLLINQSWLM 134 (669)
Q Consensus 124 v~~Ll~~~~~~ 134 (669)
+++|++++.+.
T Consensus 75 ~~~Ll~~g~~~ 85 (89)
T PF12796_consen 75 VKLLLEHGADV 85 (89)
T ss_dssp HHHHHHTTT-T
T ss_pred HHHHHHcCCCC
Confidence 66666665443
No 76
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.40 E-value=1.7e-12 Score=102.77 Aligned_cols=106 Identities=16% Similarity=0.259 Sum_probs=94.1
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCC
Q 005931 212 TPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKN 291 (669)
Q Consensus 212 tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~ 291 (669)
..+.+++++|..+-++..+... .++|..- .|++|||+|+-+|+.+++++|+.. +++++.+|+.|-|||.-|+..|+
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g-~nVn~~~-ggR~plhyAAD~GQl~ilefli~i--GA~i~~kDKygITPLLsAvwEGH 79 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEG-LNVNEIY-GGRTPLHYAADYGQLSILEFLISI--GANIQDKDKYGITPLLSAVWEGH 79 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHcc-ccHHHHh-CCcccchHhhhcchHHHHHHHHHh--ccccCCccccCCcHHHHHHHHhh
Confidence 3567899999999999988776 5666544 899999999999999999999986 77899999999999999999999
Q ss_pred HHHHHHHHHhcCcccccccCCCCCHHHHHHH
Q 005931 292 YQFVEYIIKETVLDIYCRNHKNQTALDIIEQ 322 (669)
Q Consensus 292 ~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~ 322 (669)
.++|++|| +.|+|...+-.+|.+.++.+.+
T Consensus 80 ~~cVklLL-~~GAdrt~~~PdG~~~~eate~ 109 (117)
T KOG4214|consen 80 RDCVKLLL-QNGADRTIHAPDGTALIEATEE 109 (117)
T ss_pred HHHHHHHH-HcCcccceeCCCchhHHhhccH
Confidence 99999999 8889999999999999886543
No 77
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.38 E-value=3.1e-12 Score=122.10 Aligned_cols=122 Identities=30% Similarity=0.370 Sum_probs=112.3
Q ss_pred CHHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcC
Q 005931 6 AQNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQG 85 (669)
Q Consensus 6 ~~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g 85 (669)
..+|++++-+||.+.+..|+. ..+.++++|.+|.|+|..|+..|+.++|+.|++.|+|+...++..+.||||+||.+|
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs--~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG 90 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLS--TVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG 90 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHH--HhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence 356999999999999999998 357789999999999999999999999999999999988888889999999999999
Q ss_pred CHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcC
Q 005931 86 NHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQ 130 (669)
Q Consensus 86 ~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~ 130 (669)
+.++.+.|++.|+..... |.-|+|+-.+|+.-|+.++|..+-++
T Consensus 91 n~dvcrllldaGa~~~~v-NsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 91 NQDVCRLLLDAGARMYLV-NSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred CchHHHHHHhccCccccc-cchhhhHHHHHHHhcchHHHHHHhcc
Confidence 999999999999987655 89999999999999999999876544
No 78
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.35 E-value=3.5e-12 Score=100.98 Aligned_cols=103 Identities=13% Similarity=0.202 Sum_probs=79.8
Q ss_pred HHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCC
Q 005931 7 QNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGN 86 (669)
Q Consensus 7 ~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~ 86 (669)
.++.++++.|+++.++..+. +. ..++. ...|+||||+|+.+|+.+++++|+..|++ ++.+|..|-|||.-|+..||
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~-~g-~nVn~-~~ggR~plhyAAD~GQl~ilefli~iGA~-i~~kDKygITPLLsAvwEGH 79 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVN-EG-LNVNE-IYGGRTPLHYAADYGQLSILEFLISIGAN-IQDKDKYGITPLLSAVWEGH 79 (117)
T ss_pred hhHhhhhccCcHHHHHHHHH-cc-ccHHH-HhCCcccchHhhhcchHHHHHHHHHhccc-cCCccccCCcHHHHHHHHhh
Confidence 45677888999999988887 32 22332 24788999999999999999999988888 78888889999999999999
Q ss_pred HHHHHHHHhhCCccccccCCCCCcHHHH
Q 005931 87 HEVSAFLMEANPTVATKLNHESQSAFSL 114 (669)
Q Consensus 87 ~eivk~Ll~~~~~~~~~~~~~g~tpL~~ 114 (669)
.++|++|++.|++-... ..+|.+.+..
T Consensus 80 ~~cVklLL~~GAdrt~~-~PdG~~~~ea 106 (117)
T KOG4214|consen 80 RDCVKLLLQNGADRTIH-APDGTALIEA 106 (117)
T ss_pred HHHHHHHHHcCccccee-CCCchhHHhh
Confidence 99999999888876544 5566665543
No 79
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.34 E-value=3.9e-11 Score=118.37 Aligned_cols=129 Identities=28% Similarity=0.404 Sum_probs=108.2
Q ss_pred CCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCC-----HHHHHHHHhcCC--CCcccccC
Q 005931 170 GKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGR-----VKILVAFLSSSP--ASFDRLTT 242 (669)
Q Consensus 170 ~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~-----~e~v~~LL~~~~--~~i~~~d~ 242 (669)
...+..+.+++|.++..+..+++++++..+.+++. .+.+|.||||+|+..|+ .++++.|+.... ...+..|.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~ 145 (235)
T COG0666 67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNA-KDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDE 145 (235)
T ss_pred ccCCccccCHHHHHHHcCcHHHHHHHHHcCCCccc-ccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCC
Confidence 45566688889999998888888899999988854 48889999999999988 888888888776 56777788
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHh
Q 005931 243 YGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKE 301 (669)
Q Consensus 243 ~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~ 301 (669)
.|.||||+|+..|+.+++++|++. +.+++..+..|.|+++.|+..++.+++..+++.
T Consensus 146 ~g~tpl~~A~~~~~~~~~~~ll~~--~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~ 202 (235)
T COG0666 146 DGNTPLHWAALNGDADIVELLLEA--GADPNSRNSYGVTALDPAAKNGRIELVKLLLDK 202 (235)
T ss_pred CCCchhHHHHHcCchHHHHHHHhc--CCCCcccccCCCcchhhhcccchHHHHHHHHhc
Confidence 999999999999999999999886 556677788999999999999999988888854
No 80
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=5.2e-12 Score=129.50 Aligned_cols=117 Identities=22% Similarity=0.188 Sum_probs=71.9
Q ss_pred HHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHH
Q 005931 9 LSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHE 88 (669)
Q Consensus 9 L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~e 88 (669)
|.+|+.+|.++.|+.++. + -....+.+..|-|+||-|+..||.+||++||+.|.+ +|..|.+|+||||+||..+++.
T Consensus 554 LLDaaLeGEldlVq~~i~-e-v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~gan-VNa~DSdGWTPLHCAASCNnv~ 630 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIY-E-VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGAN-VNAADSDGWTPLHCAASCNNVP 630 (752)
T ss_pred HHhhhhcchHHHHHHHHH-h-hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCc-ccCccCCCCchhhhhhhcCchH
Confidence 566666777776666665 1 123445566666777777777777777777776666 6666667777777777777777
Q ss_pred HHHHHHhhCCccccccCCCCCcHHHHH--HHcCCHHHHHHHH
Q 005931 89 VSAFLMEANPTVATKLNHESQSAFSLA--CRQGHLDVVKLLI 128 (669)
Q Consensus 89 ivk~Ll~~~~~~~~~~~~~g~tpL~~A--~~~g~~eiv~~Ll 128 (669)
+++.|++.|+.+....-.++.|+..-+ -..|..++.+||.
T Consensus 631 ~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~ 672 (752)
T KOG0515|consen 631 MCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLY 672 (752)
T ss_pred HHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHH
Confidence 777777766666555445555554433 2234444555544
No 81
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.27 E-value=1.2e-10 Score=114.75 Aligned_cols=131 Identities=28% Similarity=0.469 Sum_probs=75.9
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCC-----HHHHHHHHcCCCccccccCCCC
Q 005931 68 AAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGH-----LDVVKLLINQSWLMEFEEDSVE 142 (669)
Q Consensus 68 ~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~-----~eiv~~Ll~~~~~~~~~~~~~~ 142 (669)
...+..+.+++|.++..+..+++++++..+.++ ...+..|.||||+|+..++ .++++.|++.+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~--------- 136 (235)
T COG0666 67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGAD--------- 136 (235)
T ss_pred ccCCccccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCC---------
Confidence 344555666777777777777776666666666 4446666666666666666 4555555554441
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCC
Q 005931 143 STPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGR 222 (669)
Q Consensus 143 ~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~ 222 (669)
.......|..|.||||+|+..|+.+++++|++.++++... +..|.|+++.|+..++
T Consensus 137 -----------------------~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~-~~~g~t~l~~a~~~~~ 192 (235)
T COG0666 137 -----------------------LDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSR-NSYGVTALDPAAKNGR 192 (235)
T ss_pred -----------------------CCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCccc-ccCCCcchhhhcccch
Confidence 0333444555555555555555555555555555555544 5555555555555555
Q ss_pred HHHHHHHHhc
Q 005931 223 VKILVAFLSS 232 (669)
Q Consensus 223 ~e~v~~LL~~ 232 (669)
.+++..++..
T Consensus 193 ~~~~~~l~~~ 202 (235)
T COG0666 193 IELVKLLLDK 202 (235)
T ss_pred HHHHHHHHhc
Confidence 5555555443
No 82
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.24 E-value=1.7e-11 Score=91.45 Aligned_cols=54 Identities=37% Similarity=0.538 Sum_probs=37.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 005931 40 LNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLM 94 (669)
Q Consensus 40 g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll 94 (669)
|.||||+||..|+.+++++|++.+.+ ++.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~d-in~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGAD-INAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSG-TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 56788888888888888888877766 6666777888888888888888887775
No 83
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.23 E-value=8.6e-12 Score=93.66 Aligned_cols=51 Identities=25% Similarity=0.357 Sum_probs=31.9
Q ss_pred CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHH
Q 005931 269 TCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDII 320 (669)
Q Consensus 269 ~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a 320 (669)
..+++.+|..|+||||+|+..|+.+++++|+ +.++|++.+|.+|+||+|+|
T Consensus 6 ~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll-~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 6 PADVNAQDKYGNTPLHWAARYGHSEVVRLLL-QNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp T--TT---TTS--HHHHHHHHT-HHHHHHHH-HCT--TT---TTS--HHHH-
T ss_pred cCCCcCcCCCCCcHHHHHHHcCcHHHHHHHH-HCcCCCCCCcCCCCCHHHhC
Confidence 4678889999999999999999999999999 88999999999999999986
No 84
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.16 E-value=8e-11 Score=87.84 Aligned_cols=54 Identities=31% Similarity=0.446 Sum_probs=40.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHH
Q 005931 244 GETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYII 299 (669)
Q Consensus 244 g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll 299 (669)
|+||||+|++.|+.+++++|++. +.++|.+|.+|+||||+|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~--~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEH--GADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHT--TSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 67888888888888888888876 5678888888888888888888888888875
No 85
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.14 E-value=1.5e-10 Score=119.05 Aligned_cols=120 Identities=21% Similarity=0.218 Sum_probs=97.0
Q ss_pred hHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCH
Q 005931 42 TALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHL 121 (669)
Q Consensus 42 T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~ 121 (669)
-.|.-|+..|.+|+|+.++..-.| +...|..|-|+||-|+..||.+||++|++.|++++.. |.+|+||||+|+..++.
T Consensus 552 aLLLDaaLeGEldlVq~~i~ev~D-pSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~-DSdGWTPLHCAASCNnv 629 (752)
T KOG0515|consen 552 ALLLDAALEGELDLVQRIIYEVTD-PSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAA-DSDGWTPLHCAASCNNV 629 (752)
T ss_pred HHHHhhhhcchHHHHHHHHHhhcC-CCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCc-cCCCCchhhhhhhcCch
Confidence 345568889999999999887666 7788999999999999999999999999999998776 89999999999999999
Q ss_pred HHHHHHHcCCCccccccCCCCCcHHHHHH--HcCCHHHHHHHHh
Q 005931 122 DVVKLLINQSWLMEFEEDSVESTPIYLAI--SRGHTDIAREILE 163 (669)
Q Consensus 122 eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~--~~g~~~iv~~Ll~ 163 (669)
.+++.|++.|..+-...-.++.|+...|- ..|..++.++|..
T Consensus 630 ~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 630 PMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred HHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 99999999887765555555666665542 3455666666654
No 86
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.08 E-value=1.2e-10 Score=87.41 Aligned_cols=56 Identities=29% Similarity=0.475 Sum_probs=29.6
Q ss_pred HHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHH
Q 005931 229 FLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLA 286 (669)
Q Consensus 229 LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A 286 (669)
||+..+.+++..|..|+||||+|+.+|+.+++++|++. +++++.+|.+|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~--g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQN--GADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHC--T--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHC--cCCCCCCcCCCCCHHHhC
Confidence 34555678888888888888888888888888888853 778888888888888887
No 87
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.07 E-value=8.8e-10 Score=105.52 Aligned_cols=121 Identities=24% Similarity=0.353 Sum_probs=104.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCC
Q 005931 143 STPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGR 222 (669)
Q Consensus 143 ~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~ 222 (669)
..+|.-++..+..+-+..||..... .+.+|.+|.|+|..|+.+|+.+++++|++.|+|++...+..++||||+|+..|+
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~vr~-vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn 91 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTVRQ-VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN 91 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHhhh-hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence 4588889999999999999886443 478899999999999999999999999999999998888889999999999999
Q ss_pred HHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHH
Q 005931 223 VKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAE 265 (669)
Q Consensus 223 ~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~ 265 (669)
.++.. ++...|+.....+.-|+|+-..|+.-|+.++|..+-.
T Consensus 92 ~dvcr-llldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN 133 (396)
T KOG1710|consen 92 QDVCR-LLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINN 133 (396)
T ss_pred chHHH-HHHhccCccccccchhhhHHHHHHHhcchHHHHHHhc
Confidence 99754 5555568888888899999999999999988887754
No 88
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.07 E-value=8.4e-10 Score=125.84 Aligned_cols=87 Identities=23% Similarity=0.289 Sum_probs=81.2
Q ss_pred hHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCH
Q 005931 42 TALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHL 121 (669)
Q Consensus 42 T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~ 121 (669)
+.|+.|+..|+.+.++.|++.+++ ++.+|..|.||||+|+..|+.+++++|++.|++++.. |..|.||||+|+..|+.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gad-in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~-d~~G~TpLh~A~~~g~~ 161 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGAD-PNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLL-DKDGKTPLELAEENGFR 161 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCCcH
Confidence 358899999999999999999988 7889999999999999999999999999999998654 89999999999999999
Q ss_pred HHHHHHHcC
Q 005931 122 DVVKLLINQ 130 (669)
Q Consensus 122 eiv~~Ll~~ 130 (669)
+++++|+++
T Consensus 162 ~iv~~Ll~~ 170 (664)
T PTZ00322 162 EVVQLLSRH 170 (664)
T ss_pred HHHHHHHhC
Confidence 999999988
No 89
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.05 E-value=8.2e-10 Score=125.91 Aligned_cols=106 Identities=23% Similarity=0.224 Sum_probs=64.9
Q ss_pred HHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHH
Q 005931 179 PLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYN 258 (669)
Q Consensus 179 ~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~ 258 (669)
.|+.|+..|+.+.++.|++.|++++.. |.+|.||||+|+.+|+.++++.|+.. +.+++..|..|.||||+|+.+++.+
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~-d~~G~TpLh~Aa~~g~~eiv~~LL~~-Gadvn~~d~~G~TpLh~A~~~g~~~ 162 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCR-DYDGRTPLHIACANGHVQVVRVLLEF-GADPTLLDKDGKTPLELAEENGFRE 162 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCc-CCCCCcHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCcHH
Confidence 466666666666666666666666654 66666666666666666666655544 4566666666666666666666666
Q ss_pred HHHHHHHh-----cCCCCCccCCCCCCcHHHHH
Q 005931 259 AFKFLAES-----FNTCLFHGQDQFGNTVLHLA 286 (669)
Q Consensus 259 iv~~Ll~~-----~~~~~in~~D~~G~TpLh~A 286 (669)
++++|+++ ..+++.+..+..|.+|+..+
T Consensus 163 iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~ 195 (664)
T PTZ00322 163 VVQLLSRHSQCHFELGANAKPDSFTGKPPSLED 195 (664)
T ss_pred HHHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence 66666654 11334444555555555444
No 90
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.90 E-value=5.5e-09 Score=108.19 Aligned_cols=126 Identities=26% Similarity=0.358 Sum_probs=111.8
Q ss_pred cccCHHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCC-ccccccCCCCCcHHHHH
Q 005931 3 QGMAQNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCP-ELVAAENEKLETPLHEA 81 (669)
Q Consensus 3 ~~m~~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~-~~~~~~n~~g~TpLh~A 81 (669)
+....+|.+|+..+|+-.+++.-. ++..+-.++.+..|.||+|+..|+-|+|+||++++| ++++..|..|+|+||-|
T Consensus 864 ppiseeil~av~~~D~~klqE~h~--~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhka 941 (1004)
T KOG0782|consen 864 PPISEEILRAVLSSDLMKLQETHL--NGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKA 941 (1004)
T ss_pred CCccHHHHHHHHhccHHHHHHHHh--cCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHH
Confidence 446778999999999999888776 345567789999999999999999999999999986 46778889999999999
Q ss_pred HHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCC
Q 005931 82 CCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQS 131 (669)
Q Consensus 82 a~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~ 131 (669)
+..++..++++|++.|+.+... |..|.||-..|-+.|..|+..||-+..
T Consensus 942 a~~~~r~vc~~lvdagasl~kt-d~kg~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 942 ACQRNRAVCQLLVDAGASLRKT-DSKGKTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred HHhcchHHHHHHHhcchhheec-ccCCCChHHHHHhcCCchHHHHHhhhh
Confidence 9999999999999999998655 999999999999999999999987543
No 91
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.48 E-value=1.2e-07 Score=97.03 Aligned_cols=94 Identities=21% Similarity=0.237 Sum_probs=63.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHH
Q 005931 37 DASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLAC 116 (669)
Q Consensus 37 d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~ 116 (669)
+.++...+.+|+..|.+..++.+.-.+.+ ++.+|.+.+|+||.||..|+++++++|++.-.......|..|+|||.-|.
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D-~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~ 581 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMD-LETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK 581 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhccc-ccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence 44455566677777777777766666666 56667777777777777777777777776555444555677777777777
Q ss_pred HcCCHHHHHHHHcCC
Q 005931 117 RQGHLDVVKLLINQS 131 (669)
Q Consensus 117 ~~g~~eiv~~Ll~~~ 131 (669)
.-+|.+++++|-+..
T Consensus 582 ~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 582 HFKHKEVVKLLEEAQ 596 (622)
T ss_pred hcCcHHHHHHHHHHh
Confidence 777777777766543
No 92
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.44 E-value=5.6e-07 Score=93.67 Aligned_cols=118 Identities=19% Similarity=0.193 Sum_probs=98.9
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHH
Q 005931 214 LHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQ 293 (669)
Q Consensus 214 Lh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~ 293 (669)
+.-|+..++.--+++.... +.++-.++.+..+.||+|++.|+-++++|+++++....++..|..|.|+||-|+-.++..
T Consensus 870 il~av~~~D~~klqE~h~~-gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~ 948 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLN-GGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRA 948 (1004)
T ss_pred HHHHHHhccHHHHHHHHhc-CCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchH
Confidence 3345555554333444433 456777889999999999999999999999999887788899999999999999999999
Q ss_pred HHHHHHHhcCcccccccCCCCCHHHHHHHcCCCchHHHHH
Q 005931 294 FVEYIIKETVLDIYCRNHKNQTALDIIEQAGTNDDATSLK 333 (669)
Q Consensus 294 iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~~~~~~~~l~ 333 (669)
++.+|+ +.|+.+...|..|.||-.-|.+.++.+.+.+|.
T Consensus 949 vc~~lv-dagasl~ktd~kg~tp~eraqqa~d~dlaayle 987 (1004)
T KOG0782|consen 949 VCQLLV-DAGASLRKTDSKGKTPQERAQQAGDPDLAAYLE 987 (1004)
T ss_pred HHHHHH-hcchhheecccCCCChHHHHHhcCCchHHHHHh
Confidence 999999 888999999999999999999999988776653
No 93
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.42 E-value=1.4e-07 Score=102.27 Aligned_cols=89 Identities=20% Similarity=0.290 Sum_probs=73.9
Q ss_pred hcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCcccccc
Q 005931 231 SSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQD-QFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCR 309 (669)
Q Consensus 231 ~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D-~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~ 309 (669)
..++...+..|..|+|+||+|+..+..+++++|+++ +.+++.+| ..|.||||-|..+|+.+++-+|| ..|+.+..+
T Consensus 39 k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqh--Gidv~vqD~ESG~taLHRaiyyG~idca~lLL-~~g~SL~i~ 115 (1267)
T KOG0783|consen 39 KSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQH--GIDVFVQDEESGYTALHRAIYYGNIDCASLLL-SKGRSLRIK 115 (1267)
T ss_pred HhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhc--CceeeeccccccchHhhHhhhhchHHHHHHHH-hcCCceEEe
Confidence 344555778888899999999998999999999887 67778787 46889999999999999988888 666788889
Q ss_pred cCCCCCHHHHHHH
Q 005931 310 NHKNQTALDIIEQ 322 (669)
Q Consensus 310 n~~g~T~L~~a~~ 322 (669)
|++|..||++..+
T Consensus 116 Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 116 DKEGLSPLQFLSR 128 (1267)
T ss_pred cccCCCHHHHHhh
Confidence 9999999988776
No 94
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.37 E-value=3.8e-07 Score=99.11 Aligned_cols=105 Identities=19% Similarity=0.230 Sum_probs=87.0
Q ss_pred HHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHH
Q 005931 13 IVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAF 92 (669)
Q Consensus 13 i~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~ 92 (669)
..++...-++.++........+.+|..|+|+||+|+..|..+++++|+++|.++.-.....|+||||.|+..|+++++-.
T Consensus 25 ~tKs~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~l 104 (1267)
T KOG0783|consen 25 KTKSEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASL 104 (1267)
T ss_pred hhcCChhHHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHH
Confidence 33444445666666333456788899999999999999999999999999999555555689999999999999999999
Q ss_pred HHhhCCccccccCCCCCcHHHHHHHc
Q 005931 93 LMEANPTVATKLNHESQSAFSLACRQ 118 (669)
Q Consensus 93 Ll~~~~~~~~~~~~~g~tpL~~A~~~ 118 (669)
|+.+|..+... |++|.+||..-++-
T Consensus 105 LL~~g~SL~i~-Dkeglsplq~~~r~ 129 (1267)
T KOG0783|consen 105 LLSKGRSLRIK-DKEGLSPLQFLSRV 129 (1267)
T ss_pred HHhcCCceEEe-cccCCCHHHHHhhc
Confidence 99999887655 99999999988773
No 95
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.35 E-value=8.8e-07 Score=92.48 Aligned_cols=92 Identities=28% Similarity=0.356 Sum_probs=79.4
Q ss_pred HHHHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCC
Q 005931 7 QNLSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGN 86 (669)
Q Consensus 7 ~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~ 86 (669)
++||.++...+.+.+...+..+....++.+|..|+||||+|+..|+.+.++.|+..+++ ...+|+.|++|||.|+..|+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad-v~~kN~~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD-VSIKNNEGWSPLHEAVSTGN 100 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC-ccccccccccHHHHHHHcCC
Confidence 45899999999999988777444456788899999999999999999999999999998 78899999999999999999
Q ss_pred HHHHHHHHhhCCc
Q 005931 87 HEVSAFLMEANPT 99 (669)
Q Consensus 87 ~eivk~Ll~~~~~ 99 (669)
.+++..++.+...
T Consensus 101 ~q~i~~vlr~~~~ 113 (560)
T KOG0522|consen 101 EQIITEVLRHLKY 113 (560)
T ss_pred HHHHHHHHHHhHH
Confidence 9999888876433
No 96
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.35 E-value=1.6e-06 Score=89.30 Aligned_cols=85 Identities=21% Similarity=0.160 Sum_probs=57.0
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCCCCccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHHHcCCC
Q 005931 248 FHLAVRFDKYNAFKFLAESFNTCLFHGQD-QFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIEQAGTN 326 (669)
Q Consensus 248 Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D-~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~~~~~~ 326 (669)
||-.++.++.+..-.|+.. +++.|..+ ..|+||||+|++.|+..-+++|+ -.|+|+++.|.+|.||+++|...|+.
T Consensus 137 LhasvRt~nlet~LRll~l--GA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~-vYGAD~~a~d~~GmtP~~~AR~~gH~ 213 (669)
T KOG0818|consen 137 LHSSVRTGNLETCLRLLSL--GAQANFFHPEKGNTPLHVAAKAGQILQAELLA-VYGADPGAQDSSGMTPVDYARQGGHH 213 (669)
T ss_pred HHHHhhcccHHHHHHHHHc--ccccCCCCcccCCchhHHHHhccchhhhhHHh-hccCCCCCCCCCCCcHHHHHHhcCch
Confidence 6666677776665555554 33444433 46777777777777777777776 67777777777777777777777777
Q ss_pred chHHHHHHH
Q 005931 327 DDATSLKKL 335 (669)
Q Consensus 327 ~~~~~l~~~ 335 (669)
+.++.|.+.
T Consensus 214 ~laeRl~e~ 222 (669)
T KOG0818|consen 214 ELAERLVEI 222 (669)
T ss_pred HHHHHHHHH
Confidence 766666554
No 97
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.34 E-value=6.1e-07 Score=91.90 Aligned_cols=94 Identities=15% Similarity=0.120 Sum_probs=83.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHH
Q 005931 242 TYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIE 321 (669)
Q Consensus 242 ~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~ 321 (669)
.++...+.+|++.|....++.+.-. +.+++.+|.+.+|+||+|+..|+.+++++|++..++|++.+|..|+||||-|.
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~--g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~ 581 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQ--GMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK 581 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHh--cccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence 4556789999999999998877654 77899999999999999999999999999999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHH
Q 005931 322 QAGTNDDATSLKKLFK 337 (669)
Q Consensus 322 ~~~~~~~~~~l~~~l~ 337 (669)
.-++.+..+.|.+...
T Consensus 582 ~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 582 HFKHKEVVKLLEEAQY 597 (622)
T ss_pred hcCcHHHHHHHHHHhc
Confidence 9998887777665544
No 98
>PF13606 Ank_3: Ankyrin repeat
Probab=98.33 E-value=5.9e-07 Score=57.45 Aligned_cols=30 Identities=40% Similarity=0.568 Sum_probs=23.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCccccc
Q 005931 278 FGNTVLHLAVLRKNYQFVEYIIKETVLDIYC 308 (669)
Q Consensus 278 ~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~ 308 (669)
+|+||||+|+..|+.+++++|+ +.|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll-~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLL-EHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHH-HcCCCCCC
Confidence 4788888888888888888888 45677763
No 99
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.32 E-value=6.9e-07 Score=58.83 Aligned_cols=33 Identities=33% Similarity=0.441 Sum_probs=28.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCcccccccC
Q 005931 278 FGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNH 311 (669)
Q Consensus 278 ~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~ 311 (669)
+|+||||+|+..++.+++++|+ +.|+|++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll-~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLL-KHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHH-HTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHH-HCcCCCCCCCC
Confidence 5889999999999999999999 58888888774
No 100
>PF13606 Ank_3: Ankyrin repeat
Probab=98.30 E-value=7.5e-07 Score=56.97 Aligned_cols=27 Identities=41% Similarity=0.615 Sum_probs=17.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCcc
Q 005931 74 LETPLHEACCQGNHEVSAFLMEANPTV 100 (669)
Q Consensus 74 g~TpLh~Aa~~g~~eivk~Ll~~~~~~ 100 (669)
|+||||+||+.|+.|++++|+++|+++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 566666666666666666666666554
No 101
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.22 E-value=3.8e-06 Score=86.59 Aligned_cols=89 Identities=21% Similarity=0.267 Sum_probs=76.8
Q ss_pred hHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCH
Q 005931 42 TALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHL 121 (669)
Q Consensus 42 T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~ 121 (669)
.-||-.++.|+.|..-.|+..|++..-.-...|.||||.|++.|+..=+++|+-+|+++... |.+|.||+.+|-..||-
T Consensus 135 rQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~-d~~GmtP~~~AR~~gH~ 213 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQ-DSSGMTPVDYARQGGHH 213 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCC-CCCCCcHHHHHHhcCch
Confidence 35899999999999999999998855455578999999999999999999999999998765 99999999999999999
Q ss_pred HHHHHHHcCC
Q 005931 122 DVVKLLINQS 131 (669)
Q Consensus 122 eiv~~Ll~~~ 131 (669)
++.+.|++..
T Consensus 214 ~laeRl~e~~ 223 (669)
T KOG0818|consen 214 ELAERLVEIQ 223 (669)
T ss_pred HHHHHHHHHH
Confidence 8888887643
No 102
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.17 E-value=5.1e-06 Score=87.22 Aligned_cols=92 Identities=28% Similarity=0.282 Sum_probs=53.4
Q ss_pred CHHHHHHHHhCCHHHHHHHHcCcchhhhccc--CCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHH
Q 005931 6 AQNLSEAIVRNDKQALINLVGCSNKRILLQR--DASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACC 83 (669)
Q Consensus 6 ~~~L~~Ai~~gd~~~l~~ll~~~~~~~l~~~--d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~ 83 (669)
.+.|..|+...|+..+..||......-++.. +.+|.|+||+||+.|++.+.+.|+=.+.+ +..+|..|+|+|.||-.
T Consensus 625 gqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d-v~~rda~g~t~l~yar~ 703 (749)
T KOG0705|consen 625 GQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD-VMARDAHGRTALFYARQ 703 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc-ceecccCCchhhhhHhh
Confidence 3456666666666666666653333333333 44556666666666666666666655555 55566666666666666
Q ss_pred cCCHHHHHHHHhhCC
Q 005931 84 QGNHEVSAFLMEANP 98 (669)
Q Consensus 84 ~g~~eivk~Ll~~~~ 98 (669)
.|.-|++..|+++|.
T Consensus 704 a~sqec~d~llq~gc 718 (749)
T KOG0705|consen 704 AGSQECIDVLLQYGC 718 (749)
T ss_pred cccHHHHHHHHHcCC
Confidence 666666666666553
No 103
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.15 E-value=4.7e-06 Score=87.15 Aligned_cols=88 Identities=27% Similarity=0.317 Sum_probs=65.0
Q ss_pred hHHHHHHHcCCHHHHHHHH-hcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcC
Q 005931 212 TPLHLAAINGRVKILVAFL-SSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRK 290 (669)
Q Consensus 212 tpLh~Aa~~g~~e~v~~LL-~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~ 290 (669)
-|+|.++.....+-+...+ ......++.+|..|+||||+|+..|+.+.++.|+.. ++++..+|++|++|||.|+..|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a--~Adv~~kN~~gWs~L~EAv~~g 99 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSA--GADVSIKNNEGWSPLHEAVSTG 99 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhc--CCCccccccccccHHHHHHHcC
Confidence 3578877766665554433 334556777888888888888888888888888875 6667778888888888888888
Q ss_pred CHHHHHHHHHh
Q 005931 291 NYQFVEYIIKE 301 (669)
Q Consensus 291 ~~~iv~~Ll~~ 301 (669)
+.+++..++.+
T Consensus 100 ~~q~i~~vlr~ 110 (560)
T KOG0522|consen 100 NEQIITEVLRH 110 (560)
T ss_pred CHHHHHHHHHH
Confidence 88877777744
No 104
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.07 E-value=5.7e-06 Score=54.41 Aligned_cols=28 Identities=25% Similarity=0.474 Sum_probs=14.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCccc
Q 005931 74 LETPLHEACCQGNHEVSAFLMEANPTVA 101 (669)
Q Consensus 74 g~TpLh~Aa~~g~~eivk~Ll~~~~~~~ 101 (669)
|+||||+|+..|+.+++++|+++|+++.
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~ 29 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADIN 29 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTT
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCC
Confidence 4555555555555555555555555443
No 105
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.97 E-value=2.3e-05 Score=86.88 Aligned_cols=119 Identities=15% Similarity=0.117 Sum_probs=92.1
Q ss_pred HHHHHHhCCHHHHHHHHcCcch--hhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCC
Q 005931 9 LSEAIVRNDKQALINLVGCSNK--RILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGN 86 (669)
Q Consensus 9 L~~Ai~~gd~~~l~~ll~~~~~--~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~ 86 (669)
...|+..||...+++.++.... -.++.+|.-|.++||+|+.+.+.|+++.|++...+. ..+|.+|++.|.
T Consensus 29 fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~aI~~~~ 100 (822)
T KOG3609|consen 29 FLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLAIAVGS 100 (822)
T ss_pred HHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHHHHHHH
Confidence 5678999999999999984333 356777999999999999999999999999876542 358889999999
Q ss_pred HHHHHHHHhhCCccc---------cccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccc
Q 005931 87 HEVSAFLMEANPTVA---------TKLNHESQSAFSLACRQGHLDVVKLLINQSWLME 135 (669)
Q Consensus 87 ~eivk~Ll~~~~~~~---------~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~ 135 (669)
.++|+.++.+-.... ...-..+.||+.+||..++.|+++.|+.++....
T Consensus 101 v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 101 VPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred HHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 999999998543321 1112346788888888888888888888776554
No 106
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.84 E-value=5.3e-05 Score=84.04 Aligned_cols=122 Identities=20% Similarity=0.181 Sum_probs=86.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCc---cccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHH
Q 005931 40 LNTALHLAARFGHVELVTEITKLCPE---LVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLAC 116 (669)
Q Consensus 40 g~T~Lh~Aa~~g~~e~vk~Ll~~~~~---~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~ 116 (669)
+.--...||..|+.-.|+..++.... ..|..|.-|.++|+.|+.+.|.|+.++|++++... ..+|.+|+
T Consensus 25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~aI 96 (822)
T KOG3609|consen 25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLAI 96 (822)
T ss_pred hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHHH
Confidence 34456778999999999888886433 25677888899999999999999999999875443 45788899
Q ss_pred HcCCHHHHHHHHcCCCccc---------cccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccc
Q 005931 117 RQGHLDVVKLLINQSWLME---------FEEDSVESTPIYLAISRGHTDIAREILEVRPRFA 169 (669)
Q Consensus 117 ~~g~~eiv~~Ll~~~~~~~---------~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~ 169 (669)
..|..+.|+.++++..... ...-..+.||+.+|+..+++|+++.|++++...+
T Consensus 97 ~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 97 AVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred HHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 9999999999887654321 1122234566666666666666666666655543
No 107
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.77 E-value=3.4e-05 Score=87.98 Aligned_cols=91 Identities=23% Similarity=0.252 Sum_probs=79.1
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHH
Q 005931 241 TTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDII 320 (669)
Q Consensus 241 d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a 320 (669)
-..|.++||.|+.++...+.++|++. +.++|..|..|+||||.+...|+...+..|+ +.|+++++.|.+|++|+++|
T Consensus 653 ~~~~~s~lh~a~~~~~~~~~e~ll~~--ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll-~~~a~~~a~~~~~~~~l~~a 729 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGDSGAVELLLQN--GADVNALDSKGRTPLHHATASGHTSIACLLL-KRGADPNAFDPDGKLPLDIA 729 (785)
T ss_pred hhcccchhhhhhccchHHHHHHHHhc--CCcchhhhccCCCcchhhhhhcccchhhhhc-cccccccccCccCcchhhHH
Confidence 34689999999999999999999996 6679999999999999999999999999999 69999999999999999999
Q ss_pred HHcCCCchHHHHHHH
Q 005931 321 EQAGTNDDATSLKKL 335 (669)
Q Consensus 321 ~~~~~~~~~~~l~~~ 335 (669)
.... ......+..+
T Consensus 730 ~~~~-~~d~~~l~~l 743 (785)
T KOG0521|consen 730 MEAA-NADIVLLLRL 743 (785)
T ss_pred hhhc-cccHHHHHhh
Confidence 8884 3333334333
No 108
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.64 E-value=0.00013 Score=76.91 Aligned_cols=91 Identities=15% Similarity=0.138 Sum_probs=65.1
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCcc---ccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcC
Q 005931 43 ALHLAARFGHVELVTEITKLCPEL---VAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQG 119 (669)
Q Consensus 43 ~Lh~Aa~~g~~e~vk~Ll~~~~~~---~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g 119 (669)
-|.-|+...++..+-.|+.+|... ....+.+|.|+||+||+.|++.+.++|+=+|.++... |..|+|+|.+|-+.|
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~r-da~g~t~l~yar~a~ 705 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMAR-DAHGRTALFYARQAG 705 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceec-ccCCchhhhhHhhcc
Confidence 355566666677777777766431 2233456678888888888888888888877776554 788888888888888
Q ss_pred CHHHHHHHHcCCCcc
Q 005931 120 HLDVVKLLINQSWLM 134 (669)
Q Consensus 120 ~~eiv~~Ll~~~~~~ 134 (669)
.-+++..|++++...
T Consensus 706 sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 706 SQECIDVLLQYGCPD 720 (749)
T ss_pred cHHHHHHHHHcCCCc
Confidence 888888888877543
No 109
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.55 E-value=0.00023 Score=71.44 Aligned_cols=55 Identities=35% Similarity=0.488 Sum_probs=30.5
Q ss_pred HHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCc
Q 005931 78 LHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWL 133 (669)
Q Consensus 78 Lh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~ 133 (669)
|++||+.|+.+.|+.|++.|.+++.. |....+||++|+..||.++|++|+++|+.
T Consensus 40 lceacR~GD~d~v~~LVetgvnVN~v-D~fD~spL~lAsLcGHe~vvklLLenGAi 94 (516)
T KOG0511|consen 40 LCEACRAGDVDRVRYLVETGVNVNAV-DRFDSSPLYLASLCGHEDVVKLLLENGAI 94 (516)
T ss_pred HHHHhhcccHHHHHHHHHhCCCcchh-hcccccHHHHHHHcCcHHHHHHHHHcCCc
Confidence 55555555555555555555554443 55555555555555555555555555543
No 110
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.54 E-value=8.9e-05 Score=84.09 Aligned_cols=127 Identities=20% Similarity=0.125 Sum_probs=91.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHH
Q 005931 207 NKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLA 286 (669)
Q Consensus 207 ~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A 286 (669)
...|++.+|+++..+....+..+++-.+......|.+|...+|. |..++++++-+++.. .+..++.+|..|+||||+|
T Consensus 571 ~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~-~~~ai~i~D~~G~tpL~wA 648 (975)
T KOG0520|consen 571 NFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISA-DGVAIDIRDRNGWTPLHWA 648 (975)
T ss_pred CCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEee-cccccccccCCCCcccchH
Confidence 45678888888888888888888775344455567777777777 445556666555543 4667788888899999999
Q ss_pred HHcCCHHHHHHHHHhcC-----cccccccCCCCCHHHHHHHcCCCchHHHHHHH
Q 005931 287 VLRKNYQFVEYIIKETV-----LDIYCRNHKNQTALDIIEQAGTNDDATSLKKL 335 (669)
Q Consensus 287 ~~~~~~~iv~~Ll~~~~-----~d~~~~n~~g~T~L~~a~~~~~~~~~~~l~~~ 335 (669)
+.+|+..++..|+..+. .|+...+-.|.|+-++|...++....-.|.+.
T Consensus 649 a~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 649 AFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred hhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 98888888888883322 23445556799999999988888777665443
No 111
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.43 E-value=0.00018 Score=81.66 Aligned_cols=129 Identities=14% Similarity=0.059 Sum_probs=103.5
Q ss_pred CCCCCCCChHHHHHHhcCCHHHHHHHHhc-CCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCcHH
Q 005931 170 GKTDKNGFSPLHYASSIGNVNMTKLLLNH-NKDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTYGETVF 248 (669)
Q Consensus 170 ~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~-g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~g~t~L 248 (669)
......|.+.+|+++..++..+++.+++. |..... .|.+|.-.+|+ |..++.+....++.-.+..++.+|.+|+|||
T Consensus 568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~e-ld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL 645 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLE-LDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPL 645 (975)
T ss_pred ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchh-hcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCccc
Confidence 44456789999999999999999999986 444333 37888888888 4456667767777778889999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhcC--CC--CCccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 005931 249 HLAVRFDKYNAFKFLAESFN--TC--LFHGQDQFGNTVLHLAVLRKNYQFVEYIIK 300 (669)
Q Consensus 249 h~Av~~~~~~iv~~Ll~~~~--~~--~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~ 300 (669)
|+|+.+|+..++..|++.+. +. +....+..|-|+-.+|-.+|+..+..+|-+
T Consensus 646 ~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse 701 (975)
T KOG0520|consen 646 HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSE 701 (975)
T ss_pred chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhh
Confidence 99999999999999997644 22 333445679999999999999888887763
No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.43 E-value=0.00028 Score=64.51 Aligned_cols=65 Identities=22% Similarity=0.220 Sum_probs=48.2
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCC
Q 005931 67 VAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQS 131 (669)
Q Consensus 67 ~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~ 131 (669)
++.+|..|+|||+.|+..|+.+.+.+|+++|.......+..|.+++.+|-+.|+.+++..|.+..
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND 69 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence 56777778888888888888888888887775555555777777777777777777777777653
No 113
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.42 E-value=0.00025 Score=71.21 Aligned_cols=73 Identities=22% Similarity=0.216 Sum_probs=61.6
Q ss_pred hHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHH
Q 005931 42 TALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLAC 116 (669)
Q Consensus 42 T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~ 116 (669)
--|-.||+.|..+.|++|++.|.+ +|..|....+||.+|+..||.++|++|+++|+--... ..+|...++-|.
T Consensus 38 ~elceacR~GD~d~v~~LVetgvn-VN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rd-tf~G~RC~YgaL 110 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVN-VNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRD-TFDGDRCHYGAL 110 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCC-cchhhcccccHHHHHHHcCcHHHHHHHHHcCCccccc-ccCcchhhhhhh
Confidence 348899999999999999998888 8999999999999999999999999999999865433 556766655443
No 114
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.38 E-value=0.0004 Score=63.47 Aligned_cols=70 Identities=24% Similarity=0.090 Sum_probs=64.3
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCcc
Q 005931 31 RILLQRDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTV 100 (669)
Q Consensus 31 ~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~ 100 (669)
..++.+|..|+|+|..|+..|+.+.|.+|+..+...+...|..|.+++.+|-+.|..++++.|.+...+.
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et 72 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET 72 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence 4578999999999999999999999999999997779999999999999999999999999999975443
No 115
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.28 E-value=0.00024 Score=81.23 Aligned_cols=80 Identities=20% Similarity=0.282 Sum_probs=40.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcC
Q 005931 40 LNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQG 119 (669)
Q Consensus 40 g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g 119 (669)
|.|+||.|+..|..-.++.|++.+++ ++..|..|+||||.+...|+...+..|++++++.... +.+|.+|+++|....
T Consensus 656 ~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~-~~~~~~~l~~a~~~~ 733 (785)
T KOG0521|consen 656 GCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAF-DPDGKLPLDIAMEAA 733 (785)
T ss_pred ccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhcccccccccc-CccCcchhhHHhhhc
Confidence 34555555555555555555555554 4555555555555555555555555555555444333 445555555554443
Q ss_pred CH
Q 005931 120 HL 121 (669)
Q Consensus 120 ~~ 121 (669)
+.
T Consensus 734 ~~ 735 (785)
T KOG0521|consen 734 NA 735 (785)
T ss_pred cc
Confidence 33
No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.60 E-value=0.019 Score=35.08 Aligned_cols=25 Identities=40% Similarity=0.531 Sum_probs=14.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCC
Q 005931 74 LETPLHEACCQGNHEVSAFLMEANP 98 (669)
Q Consensus 74 g~TpLh~Aa~~g~~eivk~Ll~~~~ 98 (669)
|.||+|+|+..|+.++++.|++.+.
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~ 26 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGA 26 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4555555555555555555555544
No 117
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.44 E-value=0.025 Score=59.48 Aligned_cols=66 Identities=18% Similarity=0.237 Sum_probs=51.1
Q ss_pred CCHHHHHHHHHhcCCC----CCccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCCCHHHHHH
Q 005931 255 DKYNAFKFLAESFNTC----LFHGQDQFGNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQTALDIIE 321 (669)
Q Consensus 255 ~~~~iv~~Ll~~~~~~----~in~~D~~G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~T~L~~a~ 321 (669)
.-.+.+++|.+..-.. .....|..-.|+||+|+..|..++|.+||++ |+|+..+|..|.||.+++.
T Consensus 402 ~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Lee-g~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 402 PEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEE-GCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred CchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHh-cCCchhcccCCCCcccccc
Confidence 3466778887753211 1122455578999999999999999999955 5999999999999999876
No 118
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=95.28 E-value=0.17 Score=46.71 Aligned_cols=136 Identities=17% Similarity=0.119 Sum_probs=63.7
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHH
Q 005931 77 PLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTD 156 (669)
Q Consensus 77 pLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~ 156 (669)
.|.-|+..+...|++..-+..... -...++.+..||+..+.|+|+|+-++-...+ -.+.+..|....+.+
T Consensus 49 Ll~HAVk~nmL~ILqkyke~L~~~----~~~~q~LFElAC~~qkydiV~WI~qnL~i~~------~~~iFdIA~~~kDls 118 (192)
T PF03158_consen 49 LLYHAVKYNMLSILQKYKEDLENE----RYLNQELFELACEEQKYDIVKWIGQNLHIYN------PEDIFDIAFAKKDLS 118 (192)
T ss_pred HHHHHHHcCcHHHHHHHHHHhhcc----hhHHHHHHHHHHHHccccHHHHHhhccCCCC------chhhhhhhhhccchh
Confidence 445555555555555554432211 1234455566666666666666643322111 233455555555554
Q ss_pred HHH----HHHhcCCcccCCCCCC--CChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHHcCCHHHHHHHH
Q 005931 157 IAR----EILEVRPRFAGKTDKN--GFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAINGRVKILVAFL 230 (669)
Q Consensus 157 iv~----~Ll~~~~~~~~~~d~~--g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL 230 (669)
+.. .+.+..... ...|.. -..-|..|+.+|....+...+++|.+++. +.|..|+..++..++..++
T Consensus 119 LyslGY~l~~~~~~~~-~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~-------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 119 LYSLGYKLLFNRMMSE-HNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI-------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHHHHHhhcccc-cccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH-------HHHHHHHHhhHHHHHHHhh
Confidence 421 111111000 000000 01235566666666666666666655542 4566666666666655544
No 119
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=94.71 E-value=0.047 Score=33.14 Aligned_cols=26 Identities=46% Similarity=0.779 Sum_probs=15.6
Q ss_pred CChHHHHHHhcCCHHHHHHHHhcCCc
Q 005931 176 GFSPLHYASSIGNVNMTKLLLNHNKD 201 (669)
Q Consensus 176 g~t~Lh~Aa~~g~~eiv~~Ll~~g~~ 201 (669)
|.||+|+|+..++.++++.|++.+.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 45566666666666666666665553
No 120
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=94.31 E-value=0.36 Score=44.61 Aligned_cols=141 Identities=12% Similarity=0.131 Sum_probs=97.0
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcC
Q 005931 40 LNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQG 119 (669)
Q Consensus 40 g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g 119 (669)
-.-.|..|+.++.+.++++.-+...+. -...++.+-.||+..+.|+|+|+-+.-. -.+-.+.+..|....
T Consensus 46 ~~CLl~HAVk~nmL~ILqkyke~L~~~----~~~~q~LFElAC~~qkydiV~WI~qnL~------i~~~~~iFdIA~~~k 115 (192)
T PF03158_consen 46 MWCLLYHAVKYNMLSILQKYKEDLENE----RYLNQELFELACEEQKYDIVKWIGQNLH------IYNPEDIFDIAFAKK 115 (192)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHhhcc----hhHHHHHHHHHHHHccccHHHHHhhccC------CCCchhhhhhhhhcc
Confidence 346678899999999998876543221 1245778899999999999999954221 123356788899988
Q ss_pred CHHHHHH----HHcCCCcc-ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHH
Q 005931 120 HLDVVKL----LINQSWLM-EFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKL 194 (669)
Q Consensus 120 ~~eiv~~----Ll~~~~~~-~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~ 194 (669)
+.++... ++++.... +......-..-|..|+..|..+.+...++.+... ..+.|..|+..++..++.+
T Consensus 116 DlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~-------~~~vls~Av~ynhRkIL~y 188 (192)
T PF03158_consen 116 DLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNV-------DIIVLSQAVKYNHRKILDY 188 (192)
T ss_pred chhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcc-------cHHHHHHHHHhhHHHHHHH
Confidence 8876432 22221111 0000111123577899999999999999988765 2289999999999999998
Q ss_pred HHh
Q 005931 195 LLN 197 (669)
Q Consensus 195 Ll~ 197 (669)
++.
T Consensus 189 fi~ 191 (192)
T PF03158_consen 189 FIR 191 (192)
T ss_pred hhc
Confidence 874
No 121
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=93.61 E-value=0.093 Score=55.31 Aligned_cols=63 Identities=17% Similarity=0.210 Sum_probs=42.3
Q ss_pred HHHHHHHHHhCCcc-----ccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHH
Q 005931 53 VELVTEITKLCPEL-----VAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLAC 116 (669)
Q Consensus 53 ~e~vk~Ll~~~~~~-----~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~ 116 (669)
...+++|.+++.+. +...+.---|+||+|+..|.-++|.++|+.|.+... .|..|.||..++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~-kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPST-KDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchh-cccCCCCcccccc
Confidence 55667777765432 122233346788888888888888888888855544 4888888887776
No 122
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=92.40 E-value=1 Score=42.99 Aligned_cols=46 Identities=17% Similarity=0.234 Sum_probs=30.5
Q ss_pred HHHHHHhCCHHHHHHHHcCcchhhhcccCCCCChHHHHHHHcCCHHHHHHHHHhC
Q 005931 9 LSEAIVRNDKQALINLVGCSNKRILLQRDASLNTALHLAARFGHVELVTEITKLC 63 (669)
Q Consensus 9 L~~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~ 63 (669)
|-+||..-+.+.+..++. ... .-.++|-+|..++..+++-+|+...
T Consensus 157 ledAV~AsN~~~i~~~Vt-dKk--------dA~~Am~~si~~~K~dva~~lls~f 202 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVT-DKK--------DAHQAMWLSIGNAKEDVALYLLSKF 202 (284)
T ss_pred HHHHHhhcCHHHHHHHhc-chH--------HHHHHHHHHhcccHHHHHHHHHhhc
Confidence 566777777777777666 211 1246777777777778887777653
No 123
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=89.10 E-value=11 Score=39.04 Aligned_cols=93 Identities=11% Similarity=0.076 Sum_probs=46.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCC--cccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCC-------CCccCCC
Q 005931 207 NKDGYTPLHLAAINGRVKILVAFLSSSPAS--FDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTC-------LFHGQDQ 277 (669)
Q Consensus 207 ~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~--i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~-------~in~~D~ 277 (669)
|..|...+..+...+..+....++..-... .-..++.|...+..+......+.-+.+++..-.. .-=..|.
T Consensus 198 d~~Gn~vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~k~Gs~Vve~~l~~~~~~~~~~ii~~l~~~~~~~~~l~~l~~d~ 277 (322)
T cd07920 198 DQFGNYVVQHVLELGDPDDTSRIIEKLLGNIVQLSCHKFASNVVEKCLKHASKEERELIIDEILASGNETSALDTLMKDQ 277 (322)
T ss_pred CCchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHCCHHHHHHHHHHHhcCCCchhHHHHHhCCC
Confidence 555655566655555543322222211111 1133566666666666665533333333322110 1124678
Q ss_pred CCCcHHHHHHHcCCHHHHHHHH
Q 005931 278 FGNTVLHLAVLRKNYQFVEYII 299 (669)
Q Consensus 278 ~G~TpLh~A~~~~~~~iv~~Ll 299 (669)
.|+-.+..+.........+.++
T Consensus 278 ~Gn~Viq~~l~~~~~~~~~~i~ 299 (322)
T cd07920 278 YGNYVIQTALDVAKEEQRELLV 299 (322)
T ss_pred cccHHHHHHHHhCCHHHHHHHH
Confidence 8888888888777655444444
No 124
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=88.08 E-value=9.2 Score=39.74 Aligned_cols=270 Identities=11% Similarity=0.060 Sum_probs=133.6
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHh-CCcc-ccccCCCCCcHHHHHHHcCCHHHHHHHHhh--CCccccccCCCCCc
Q 005931 35 QRDASLNTALHLAARFGHVELVTEITKL-CPEL-VAAENEKLETPLHEACCQGNHEVSAFLMEA--NPTVATKLNHESQS 110 (669)
Q Consensus 35 ~~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~-~~~~-~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~--~~~~~~~~~~~g~t 110 (669)
..|..|.-.|.-+...+..+....+++. .+.. .-..|..|+-.+.-....+..+-...+++. +.-..-..+..|.-
T Consensus 16 ~~~~~gsr~lQ~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~~ 95 (322)
T cd07920 16 AKDQHGSRFLQQKLEEATPEEKELIFDEILPHVVELMVDPFGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGCR 95 (322)
T ss_pred cCCchhhHHHHHHhccCCHHHHHHHHHHHHHhHHHHhcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhHH
Confidence 3488899999999999998888877775 1221 223455666666666666665544444432 11111112333333
Q ss_pred HHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHH
Q 005931 111 AFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVN 190 (669)
Q Consensus 111 pL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~e 190 (669)
.+..+...+..+....+++. +...-.. -..|..|...+..+...+..+
T Consensus 96 vlqkll~~~~~~~~~~i~~~------------------------------l~~~~~~--L~~d~~gn~Vvq~~l~~~~~~ 143 (322)
T cd07920 96 VIQKLLESISEEQISLLVKE------------------------------LRGHVVE--LVKDQNGNHVIQKCIEKFPPE 143 (322)
T ss_pred HHHHHHHhcCHHHHHHHHHH------------------------------HHHCHHH--HhhcccccHHHHHHHHhCCHH
Confidence 33333333332222222211 1100000 112344444444444444333
Q ss_pred HHHHHHhcC--CccccccCCCCChHHHHHHHcCCHHHHHHHHhcCC--CCcccccCCCCcHHHHHHHcCCHHHHHHHHHh
Q 005931 191 MTKLLLNHN--KDLALQYNKDGYTPLHLAAINGRVKILVAFLSSSP--ASFDRLTTYGETVFHLAVRFDKYNAFKFLAES 266 (669)
Q Consensus 191 iv~~Ll~~g--~~~~~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~--~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~ 266 (669)
..+.+++.- .-.....+..|...+.........+....++..-- ...-..|..|...+..++..+..+..+.+++.
T Consensus 144 ~~~~i~~~l~~~~~~l~~~~~G~~vvq~~l~~~~~~~~~~l~~~l~~~~~~L~~d~~Gn~vvq~~l~~~~~~~~~~i~~~ 223 (322)
T cd07920 144 DLQFIIDAFKGNCVALSTHPYGCRVIQRCLEHCSEEQREPLLEEILEHALELVQDQFGNYVVQHVLELGDPDDTSRIIEK 223 (322)
T ss_pred HHHHHHHHHHHHHHHHHcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHhcCCHHHHHHHHHH
Confidence 333322210 01111224455555555554443332222222110 01113467899999999998877666666554
Q ss_pred cCCCCC-ccCCCCCCcHHHHHHHcCCH----HHHHHHHHhc----CcccccccCCCCCHHHHHHHcCCCchHHHHHHHH
Q 005931 267 FNTCLF-HGQDQFGNTVLHLAVLRKNY----QFVEYIIKET----VLDIYCRNHKNQTALDIIEQAGTNDDATSLKKLF 336 (669)
Q Consensus 267 ~~~~~i-n~~D~~G~TpLh~A~~~~~~----~iv~~Ll~~~----~~d~~~~n~~g~T~L~~a~~~~~~~~~~~l~~~l 336 (669)
..+... -..+..|...+..+...+.. .+++.|+... ...--+.|..|.-.+.-+...........+...+
T Consensus 224 l~~~~~~l~~~k~Gs~Vve~~l~~~~~~~~~~ii~~l~~~~~~~~~l~~l~~d~~Gn~Viq~~l~~~~~~~~~~i~~~l 302 (322)
T cd07920 224 LLGNIVQLSCHKFASNVVEKCLKHASKEERELIIDEILASGNETSALDTLMKDQYGNYVIQTALDVAKEEQRELLVEAI 302 (322)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHCCHHHHHHHHHHHhcCCCchhHHHHHhCCCcccHHHHHHHHhCCHHHHHHHHHHH
Confidence 322111 24678999988888887754 3444444221 2223456778887777777766644334444433
No 125
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=86.28 E-value=1.1 Score=35.52 Aligned_cols=46 Identities=20% Similarity=0.289 Sum_probs=25.0
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcC
Q 005931 77 PLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQ 130 (669)
Q Consensus 77 pLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~ 130 (669)
-+..|+.+|+.||++.+++.+... ...+..|+...+.+++++|+++
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~~~~--------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKNKPD--------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHhccH--------HHHHHHHHHHhhHHHHHHHHHh
Confidence 455666666666666665433110 2345566666666666666554
No 126
>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569. This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.
Probab=85.88 E-value=11 Score=34.46 Aligned_cols=33 Identities=27% Similarity=0.270 Sum_probs=27.1
Q ss_pred ccccCCCccceeehhhhhHHHHHHHHHHHHHHh
Q 005931 505 KSLVGRTKAFKIFEISNNIALFTSLSIVIILVS 537 (669)
Q Consensus 505 ~~~~~~~~~f~~F~~~~~~a~~~S~~~~~~l~~ 537 (669)
+..+.+.++|+.|++.|.++...|+..++.-+.
T Consensus 35 ~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~ 67 (154)
T TIGR01569 35 KAKFSDLPAFVYFVVANAIACGYSLLSLVVSIF 67 (154)
T ss_pred eeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355677889999999999999999988776544
No 127
>PF14126 DUF4293: Domain of unknown function (DUF4293)
Probab=85.74 E-value=28 Score=31.71 Aligned_cols=33 Identities=21% Similarity=0.419 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH
Q 005931 522 NIALFTSLSIVIILVSIIPFERKKLMRLLVITH 554 (669)
Q Consensus 522 ~~a~~~S~~~~~~l~~~~~~~~~~~~~~l~~~~ 554 (669)
.+...+.+++++.+++++.+++|...-.+....
T Consensus 55 ~l~il~~l~~~lal~aIFlyKnR~lQ~~L~~~n 87 (149)
T PF14126_consen 55 PLFILLVLSAILALIAIFLYKNRKLQIRLCVLN 87 (149)
T ss_pred HHHHHHHHHHHHHHHHHHccccHHHHHHHHHHH
Confidence 344445555566677888888777665555533
No 128
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=85.24 E-value=1.7 Score=34.55 Aligned_cols=48 Identities=23% Similarity=0.207 Sum_probs=37.5
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhh
Q 005931 41 NTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEA 96 (669)
Q Consensus 41 ~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~ 96 (669)
...|..|+..|+.|+++.+++.+.. ....+..|+..-+.+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~~~--------~~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKNKP--------DNDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhcc--------HHHHHHHHHHHhhHHHHHHHHHh
Confidence 4568888999999999888865422 14568889999999999999886
No 129
>KOG4193 consensus G protein-coupled receptors [Signal transduction mechanisms]
Probab=84.51 E-value=23 Score=40.18 Aligned_cols=67 Identities=18% Similarity=0.151 Sum_probs=42.5
Q ss_pred HHHHHH-HHHHHHHHhhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhCCCC
Q 005931 557 MWVSIS-FMATAYIAATRITVPDDRGTGWVTDSLLATGAGTLGFLFLYLGVELIRHRLRKLEWRAKKLGKQS 627 (669)
Q Consensus 557 ~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (669)
..++++ -|.++.+.|++...+. .|..+.++....-.+=.+|+++.+.+.++..|+..+|....++++
T Consensus 518 ~~l~L~~lLGlTW~fgi~s~~~~----~~~v~~YlFti~NalQG~fIFi~~cll~~kvr~~~~k~~~~~~~~ 585 (610)
T KOG4193|consen 518 SALALLFLLGLTWIFGIFSWLPG----TSVVFAYLFTIFNALQGVFIFIFHCLLRKKVRKEYRKWLCCGRGD 585 (610)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc----cchHHHHHHHHHHHhhhhHhhHhhhhhhHHHHHHHHHHhcccCCC
Confidence 344444 3556777777777653 244444444444556667888888888888888877777755544
No 130
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=83.19 E-value=6.4 Score=37.79 Aligned_cols=116 Identities=17% Similarity=0.109 Sum_probs=62.8
Q ss_pred HHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcCCCcc--ccccCCCCCcHHHHHHH--cC
Q 005931 78 LHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQSWLM--EFEEDSVESTPIYLAIS--RG 153 (669)
Q Consensus 78 Lh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~--~~~~~~~~~t~L~~A~~--~g 153 (669)
|-.|+..-|.+-+.-++....+ ..+++-+|+.++..+++.+|+.+-.-. +...-..+..-+.++.. ..
T Consensus 157 ledAV~AsN~~~i~~~VtdKkd--------A~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~~~ydieY~LS~h~a 228 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVTDKKD--------AHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEKELYDIEYLLSEHSA 228 (284)
T ss_pred HHHHHhhcCHHHHHHHhcchHH--------HHHHHHHHhcccHHHHHHHHHhhcceecchhhhcCcchhhHHHHHhhcCC
Confidence 4555555555555555442221 224555555555566666665432110 00000111112333322 23
Q ss_pred CHHHHHHHHhcCCcccC---CCCCCCChHHHHHHhcCCHHHHHHHHhcCCc
Q 005931 154 HTDIAREILEVRPRFAG---KTDKNGFSPLHYASSIGNVNMTKLLLNHNKD 201 (669)
Q Consensus 154 ~~~iv~~Ll~~~~~~~~---~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~ 201 (669)
+..+++++++.|-..++ .+-..|.|-|.-|...++.+++..|+++|+-
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 45677777776644332 2345688999999999999999999999874
No 131
>COG2322 Predicted membrane protein [Function unknown]
Probab=82.77 E-value=38 Score=30.95 Aligned_cols=24 Identities=21% Similarity=0.245 Sum_probs=15.4
Q ss_pred hhhHHHHHHHHHHHHHhccccCCC
Q 005931 471 RNTIILVAILIATVTYTGGISPPG 494 (669)
Q Consensus 471 ~~~~~~va~liatvtf~a~~~~Pg 494 (669)
..+.+.+|.++..++=--++.|||
T Consensus 11 ~~~vl~~a~va~~~~av~~~~P~g 34 (177)
T COG2322 11 LAAVLGLASVAVVVIAVLAFSPAG 34 (177)
T ss_pred cHHHHHHHHHHHHHHHHHhhCCCC
Confidence 445566666666666666778777
No 132
>KOG4016 consensus Synaptic vesicle protein Synaptogyrin involved in regulation of Ca2+-dependent exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=79.79 E-value=45 Score=31.67 Aligned_cols=98 Identities=13% Similarity=0.274 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHhccccCCCccCCCCCCCCccc--cCCCccceeehhhhhHHHHHHHHHHHHHH--------hcccchhHH
Q 005931 476 LVAILIATVTYTGGISPPGGVYQEGPLKGKSL--VGRTKAFKIFEISNNIALFTSLSIVIILV--------SIIPFERKK 545 (669)
Q Consensus 476 ~va~liatvtf~a~~~~Pgg~~~~~~~~g~~~--~~~~~~f~~F~~~~~~a~~~S~~~~~~l~--------~~~~~~~~~ 545 (669)
+++-|.+-|.|.... -+||.. ....|.+. +.++. .+=-+.++++|++-+..+.+|+ |..+.|++.
T Consensus 30 ~~~~lFsliVf~si~--~eGy~n-~~~~~~~~Ciynrn~--~ACsyg~avG~~Afla~~~flvlD~~f~qISsv~~Rkra 104 (233)
T KOG4016|consen 30 VVSWLFSLIVFGSIV--NEGYLN-SASSGEEFCIYNRNS--NACSYGVAVGVLAFLACLAFLVLDVYFPQISSVKDRKRA 104 (233)
T ss_pred HHHHHHHHhheeeec--cccccC-cccCCceEEEECCCC--cchhHHHHHHHHHHHHHHHHHHHHhhhhhhcccchhHHH
Confidence 455566666675544 356533 22234332 22111 1223445555554444444433 333334443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 005931 546 LMRLLVITHKVMWVSISFMATAYIAATRITVPDDR 580 (669)
Q Consensus 546 ~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 580 (669)
+ +.=++...+|..+-++...|.+.-|-+.++..
T Consensus 105 V--l~Dl~~SalwtflwfvGFc~l~nqwqvs~p~~ 137 (233)
T KOG4016|consen 105 V--LADLGVSALWAFLWFVGFCFLANQWQVSKPKE 137 (233)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Confidence 3 33445568999999999999999998886543
No 133
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.69 E-value=29 Score=35.65 Aligned_cols=25 Identities=36% Similarity=0.486 Sum_probs=17.8
Q ss_pred eehhhh--hHHHHHHHHHHHHHHhccc
Q 005931 516 IFEISN--NIALFTSLSIVIILVSIIP 540 (669)
Q Consensus 516 ~F~~~~--~~a~~~S~~~~~~l~~~~~ 540 (669)
+|.++. +++.++|+++|+++++.+.
T Consensus 161 vFYYssG~v~GilaSLl~Viflv~rf~ 187 (452)
T KOG3817|consen 161 VFYYSSGIVIGILASLLVVIFLVARFF 187 (452)
T ss_pred eEEEecccHHHHHHHHHHHHHHHHHhc
Confidence 455544 5677999999999887543
No 134
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.00 E-value=11 Score=29.98 Aligned_cols=47 Identities=11% Similarity=0.106 Sum_probs=33.3
Q ss_pred eeehhhhhHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 005931 515 KIFEISNNIALFTSLSIVIILVSIIPFERKKLMRLLVITHKVMWVSISFMATAYIAATRI 574 (669)
Q Consensus 515 ~~F~~~~~~a~~~S~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~ 574 (669)
.+++++|++||-+|+..+.+=++..|.+.... ...+|.++|..|+.+
T Consensus 14 pawi~f~waafg~s~~m~~~gi~~lPVD~w~K-------------Gy~~MG~lfltgSt~ 60 (95)
T COG4298 14 PAWIMFNWAAFGASYFMLGLGIWLLPVDLWTK-------------GYWAMGILFLTGSTV 60 (95)
T ss_pred chhHhHHHHHHHHHHHHHHHHhheechHHHHH-------------HHHHHHHHHHhcchh
Confidence 45788999999999988877777777653322 233577777777744
No 135
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=68.93 E-value=4.2 Score=35.08 Aligned_cols=24 Identities=13% Similarity=0.183 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHhh
Q 005931 599 FLFLYLGVELIRHRLRKLEWRAKK 622 (669)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~ 622 (669)
++++..+.-.++-++||++.||++
T Consensus 92 LmlL~~~alcW~~~~rkK~~kr~e 115 (129)
T PF15099_consen 92 LMLLACSALCWKPIIRKKKKKRRE 115 (129)
T ss_pred HHHHHhhhheehhhhHhHHHHhhh
Confidence 333333433334444554444433
No 136
>PF07214 DUF1418: Protein of unknown function (DUF1418); InterPro: IPR010815 This family consists of several hypothetical Enterobacterial proteins of around 100 residues in length. Members of this family are often described as YbjC. In Escherichia coli the ybjC gene is located downstream of nfsA (which encodes the major oxygen-insensitive nitroreductase). It is thought that nfsA and ybjC form an operon an its promoter is a class I SoxS-dependent promoter []. The function of this family is unknown.
Probab=65.73 E-value=33 Score=28.25 Aligned_cols=55 Identities=11% Similarity=0.158 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHhh-hccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005931 557 MWVSISFMATAYIAAT-RITVPDDRGTGWVTDSLLATGAGTLGFLFLYLGVELIRH 611 (669)
Q Consensus 557 ~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (669)
=.+.++-+++||.+-- |+.+|..-...-..+..+.+++++++.-.+.+.||...-
T Consensus 15 E~lG~~LLv~a~Lsin~~l~LP~~l~~~~aai~MIf~Gi~lMlPAav~ivWR~a~~ 70 (96)
T PF07214_consen 15 EVLGMILLVLAYLSINDYLSLPAPLSTPTAAIAMIFVGIGLMLPAAVNIVWRVAKG 70 (96)
T ss_pred HHHHHHHHHHHHHHHcccccCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667777886643 567776666666666677777777777777777776543
No 137
>PLN03077 Protein ECB2; Provisional
Probab=65.54 E-value=2.7e+02 Score=33.37 Aligned_cols=189 Identities=14% Similarity=0.117 Sum_probs=94.1
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHH-HHHHhcCCHHHHHHHH----hcCCccccccCCCCChHHH-HH
Q 005931 144 TPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPL-HYASSIGNVNMTKLLL----NHNKDLALQYNKDGYTPLH-LA 217 (669)
Q Consensus 144 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L-h~Aa~~g~~eiv~~Ll----~~g~~~~~~~~~~g~tpLh-~A 217 (669)
..+...++.|..+-+..+.+.. ..|...++.| ...+..|..+-+..++ +.|..+ |....+.+. ..
T Consensus 529 aLi~~y~k~G~~~~A~~~f~~~-----~~d~~s~n~lI~~~~~~G~~~~A~~lf~~M~~~g~~P----d~~T~~~ll~a~ 599 (857)
T PLN03077 529 ALLDLYVRCGRMNYAWNQFNSH-----EKDVVSWNILLTGYVAHGKGSMAVELFNRMVESGVNP----DEVTFISLLCAC 599 (857)
T ss_pred HHHHHHHHcCCHHHHHHHHHhc-----CCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC----CcccHHHHHHHH
Confidence 4555666777777776666543 2233344444 3445677765444444 344333 333334443 33
Q ss_pred HHcCCHHHHHHHHh----cCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHH-cCCH
Q 005931 218 AINGRVKILVAFLS----SSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVL-RKNY 292 (669)
Q Consensus 218 a~~g~~e~v~~LL~----~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~-~~~~ 292 (669)
+..|..+-...++. ..+..++.. .-...+..-.+.|+.+-+.-+++... -..|..-++.|--|+. +++.
T Consensus 600 ~~~g~v~ea~~~f~~M~~~~gi~P~~~--~y~~lv~~l~r~G~~~eA~~~~~~m~----~~pd~~~~~aLl~ac~~~~~~ 673 (857)
T PLN03077 600 SRSGMVTQGLEYFHSMEEKYSITPNLK--HYACVVDLLGRAGKLTEAYNFINKMP----ITPDPAVWGALLNACRIHRHV 673 (857)
T ss_pred hhcChHHHHHHHHHHHHHHhCCCCchH--HHHHHHHHHHhCCCHHHHHHHHHHCC----CCCCHHHHHHHHHHHHHcCCh
Confidence 44566655444443 333322210 01122334456787776666666422 1234444555555554 5677
Q ss_pred HHHHHHHHhcCcccccccCCCCCHH-HHHHHcCCCchHHHHHHHHHHhCCCCCCCCC
Q 005931 293 QFVEYIIKETVLDIYCRNHKNQTAL-DIIEQAGTNDDATSLKKLFKTAGNIGSPELS 348 (669)
Q Consensus 293 ~iv~~Ll~~~~~d~~~~n~~g~T~L-~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 348 (669)
+..+...+ .-....-.|...+.-| .+-...|.-+.+..+.+.++..|-...+..+
T Consensus 674 e~~e~~a~-~l~~l~p~~~~~y~ll~n~ya~~g~~~~a~~vr~~M~~~g~~k~~g~s 729 (857)
T PLN03077 674 ELGELAAQ-HIFELDPNSVGYYILLCNLYADAGKWDEVARVRKTMRENGLTVDPGCS 729 (857)
T ss_pred HHHHHHHH-HHHhhCCCCcchHHHHHHHHHHCCChHHHHHHHHHHHHcCCCCCCCcc
Confidence 76554431 1112222222222222 2445677778888888888888765554433
No 138
>KOG2417 consensus Predicted G-protein coupled receptor [Signal transduction mechanisms]
Probab=65.32 E-value=39 Score=34.78 Aligned_cols=64 Identities=20% Similarity=0.164 Sum_probs=39.5
Q ss_pred CccceeehhhhhHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 005931 511 TKAFKIFEISNNIALFTSLSIVIILVSIIPFERKKLMRLLVITHKVMWVSISFMATAYIAATRI 574 (669)
Q Consensus 511 ~~~f~~F~~~~~~a~~~S~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~ 574 (669)
+.+..-|+++-+.||.+|+.-.+++--+........+..-...+.++.+-++.|+--|.+...+
T Consensus 38 ~~~~Vq~Ifs~tfa~sc~lfeliifeii~vl~~~sr~~~w~~~l~~ill~lv~~ip~Y~~y~ii 101 (462)
T KOG2417|consen 38 HNRVVQFIFSVTFAFSCSLFELIIFEIIDVLSPESRMFCWKVCLSLILLTLVFMIPYYHCYLII 101 (462)
T ss_pred HhhheeeehhHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHhHHHHHHHHHHHHHHHhheeee
Confidence 4566779999999999999877765433322222222222233446666777777777766543
No 139
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=62.07 E-value=3.1e+02 Score=31.96 Aligned_cols=276 Identities=12% Similarity=0.102 Sum_probs=131.8
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcH-HHHHHHcCCHHHHHHHH----hhCCccccccCCC-CCcHHHH
Q 005931 41 NTALHLAARFGHVELVTEITKLCPELVAAENEKLETP-LHEACCQGNHEVSAFLM----EANPTVATKLNHE-SQSAFSL 114 (669)
Q Consensus 41 ~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~Tp-Lh~Aa~~g~~eivk~Ll----~~~~~~~~~~~~~-g~tpL~~ 114 (669)
++.+..-++.|..+-...+++.-++ +|..-++. +..-+..|+.+-+..++ +.|..+ |.. -.+.+..
T Consensus 263 n~Li~~y~k~g~~~~A~~vf~~m~~----~~~vt~n~li~~y~~~g~~~eA~~lf~~M~~~g~~p----d~~t~~~ll~a 334 (697)
T PLN03081 263 CALIDMYSKCGDIEDARCVFDGMPE----KTTVAWNSMLAGYALHGYSEEALCLYYEMRDSGVSI----DQFTFSIMIRI 334 (697)
T ss_pred HHHHHHHHHCCCHHHHHHHHHhCCC----CChhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC----CHHHHHHHHHH
Confidence 4455566666666666666554332 12222233 33344566654433333 222221 111 1223344
Q ss_pred HHHcCCHHHHHHH----HcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHH-HHHhcCCH
Q 005931 115 ACRQGHLDVVKLL----INQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLH-YASSIGNV 189 (669)
Q Consensus 115 A~~~g~~eiv~~L----l~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh-~Aa~~g~~ 189 (669)
.+..|..+-.+.+ ++.+...+ .....+.+...+..|+.+-+..+++.-.. .|..-++.|. ..+..|+.
T Consensus 335 ~~~~g~~~~a~~i~~~m~~~g~~~d---~~~~~~Li~~y~k~G~~~~A~~vf~~m~~----~d~~t~n~lI~~y~~~G~~ 407 (697)
T PLN03081 335 FSRLALLEHAKQAHAGLIRTGFPLD---IVANTALVDLYSKWGRMEDARNVFDRMPR----KNLISWNALIAGYGNHGRG 407 (697)
T ss_pred HHhccchHHHHHHHHHHHHhCCCCC---eeehHHHHHHHHHCCCHHHHHHHHHhCCC----CCeeeHHHHHHHHHHcCCH
Confidence 4555555543333 33332221 11133456666778888888887775432 2333444443 34566765
Q ss_pred HH----HHHHHhcCCccccccCCCCChH-HHHHHHcCCHHHHHHHHhc----CCCCcccccCCCCcHHHHHHHcCCHHHH
Q 005931 190 NM----TKLLLNHNKDLALQYNKDGYTP-LHLAAINGRVKILVAFLSS----SPASFDRLTTYGETVFHLAVRFDKYNAF 260 (669)
Q Consensus 190 ei----v~~Ll~~g~~~~~~~~~~g~tp-Lh~Aa~~g~~e~v~~LL~~----~~~~i~~~d~~g~t~Lh~Av~~~~~~iv 260 (669)
+- .+.+.+.|..++.. ..+. |...+..|..+-...++.. .+...+. ..-...+..-++.|+.+-+
T Consensus 408 ~~A~~lf~~M~~~g~~Pd~~----T~~~ll~a~~~~g~~~~a~~~f~~m~~~~g~~p~~--~~y~~li~~l~r~G~~~eA 481 (697)
T PLN03081 408 TKAVEMFERMIAEGVAPNHV----TFLAVLSACRYSGLSEQGWEIFQSMSENHRIKPRA--MHYACMIELLGREGLLDEA 481 (697)
T ss_pred HHHHHHHHHHHHhCCCCCHH----HHHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCCCc--cchHhHHHHHHhcCCHHHH
Confidence 43 33334444443322 2223 3333455666655555432 2222221 1112234455677777766
Q ss_pred HHHHHhcCCCCCccCCCC-CCcHHHHHHHcCCHHHHHHHHHhcCcccccccCCCC-CHHHHHHHcCCCchHHHHHHHHHH
Q 005931 261 KFLAESFNTCLFHGQDQF-GNTVLHLAVLRKNYQFVEYIIKETVLDIYCRNHKNQ-TALDIIEQAGTNDDATSLKKLFKT 338 (669)
Q Consensus 261 ~~Ll~~~~~~~in~~D~~-G~TpLh~A~~~~~~~iv~~Ll~~~~~d~~~~n~~g~-T~L~~a~~~~~~~~~~~l~~~l~~ 338 (669)
.-+++... -..|.. -++.|......|+.+..+...++. ......+...+ ...++....|..+.+..+.+.++.
T Consensus 482 ~~~~~~~~----~~p~~~~~~~Ll~a~~~~g~~~~a~~~~~~l-~~~~p~~~~~y~~L~~~y~~~G~~~~A~~v~~~m~~ 556 (697)
T PLN03081 482 YAMIRRAP----FKPTVNMWAALLTACRIHKNLELGRLAAEKL-YGMGPEKLNNYVVLLNLYNSSGRQAEAAKVVETLKR 556 (697)
T ss_pred HHHHHHCC----CCCCHHHHHHHHHHHHHcCCcHHHHHHHHHH-hCCCCCCCcchHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 66665321 112222 234445555778888776655331 12222222222 234556677778888888888887
Q ss_pred hCCC
Q 005931 339 AGNI 342 (669)
Q Consensus 339 ~~~~ 342 (669)
.|-.
T Consensus 557 ~g~~ 560 (697)
T PLN03081 557 KGLS 560 (697)
T ss_pred cCCc
Confidence 7754
No 140
>PF14851 FAM176: FAM176 family
Probab=59.59 E-value=32 Score=31.31 Aligned_cols=24 Identities=29% Similarity=0.221 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 005931 592 TGAGTLGFLFLYLGVELIRHRLRK 615 (669)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~ 615 (669)
+++|+.+.+++.|+...++-.+++
T Consensus 26 Fv~gVC~GLlLtLcllV~risc~~ 49 (153)
T PF14851_consen 26 FVSGVCAGLLLTLCLLVIRISCRP 49 (153)
T ss_pred HHHHHHHHHHHHHHHHHhhheeec
Confidence 334455555555665555555543
No 141
>PF03188 Cytochrom_B561: Eukaryotic cytochrome b561; InterPro: IPR004877 Cytochrome b561 is a secretory vesicle-specific electron transport protein []. It is an integral membrane protein, that binds two haem groups non-covalently. This entry represents the eukaryotic family. Members of the 'bacterial cytochrome b561' family can be found in IPR011577 from INTERPRO.; GO: 0016021 integral to membrane
Probab=59.56 E-value=68 Score=28.39 Aligned_cols=21 Identities=10% Similarity=0.138 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHhhhccc
Q 005931 556 VMWVSISFMATAYIAATRITV 576 (669)
Q Consensus 556 ~~~~~~~~~~~a~~~~~~~~~ 576 (669)
+.++++++++++++++....-
T Consensus 41 lq~l~~~~~~~G~~~~~~~~~ 61 (137)
T PF03188_consen 41 LQVLALVFAIIGFVAIFINKN 61 (137)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 677888888888888776544
No 142
>PTZ00370 STEVOR; Provisional
Probab=59.04 E-value=34 Score=34.27 Aligned_cols=19 Identities=11% Similarity=0.097 Sum_probs=15.8
Q ss_pred hhHHHHHHHHHHHHHhccc
Q 005931 472 NTIILVAILIATVTYTGGI 490 (669)
Q Consensus 472 ~~~~~va~liatvtf~a~~ 490 (669)
.+|.|.++|...+..+||=
T Consensus 177 ~~CsVGSafLT~IGLaAAK 195 (296)
T PTZ00370 177 CSCSLGSALLTLIGLAAAK 195 (296)
T ss_pred EeeccHHHHHHHHHHHHHH
Confidence 6788999999988888764
No 143
>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.
Probab=57.54 E-value=44 Score=30.35 Aligned_cols=34 Identities=21% Similarity=0.169 Sum_probs=27.5
Q ss_pred CccccCCCccceeehhhhhHHHHHHHHHHHHHHh
Q 005931 504 GKSLVGRTKAFKIFEISNNIALFTSLSIVIILVS 537 (669)
Q Consensus 504 g~~~~~~~~~f~~F~~~~~~a~~~S~~~~~~l~~ 537 (669)
++.-+.+-+.|+.|+..|.+++..|+..++.-+.
T Consensus 39 ~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~ 72 (149)
T PF04535_consen 39 FTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIY 72 (149)
T ss_pred cceeecccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555667788999999999999999988777554
No 144
>PRK10591 hypothetical protein; Provisional
Probab=56.47 E-value=51 Score=26.94 Aligned_cols=55 Identities=9% Similarity=0.086 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHhh-hccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005931 557 MWVSISFMATAYIAAT-RITVPDDRGTGWVTDSLLATGAGTLGFLFLYLGVELIRH 611 (669)
Q Consensus 557 ~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (669)
=.+.++.+++||.+-- |+.+|..-++.-..+..+.+++++++..-+.+.||...-
T Consensus 15 E~lGi~LLv~a~Lsindyl~lP~~l~~~~aai~mif~Gi~lmiPAav~ivWR~a~~ 70 (92)
T PRK10591 15 EVLGMLLLVVAYLSLNDYLSLPEPLSTPTAAILMIFLGVLLMLPAAVVIIWRVAKG 70 (92)
T ss_pred HHHHHHHHHHHHHHHcccccCCccccCchHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3456667777877765 566776656656666667777777777777777766543
No 145
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=55.87 E-value=29 Score=35.99 Aligned_cols=19 Identities=26% Similarity=0.282 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 005931 556 VMWVSISFMATAYIAATRI 574 (669)
Q Consensus 556 ~~~~~~~~~~~a~~~~~~~ 574 (669)
+..++++++..+|++|+|-
T Consensus 261 LTvvt~IflP~t~IaGiyG 279 (318)
T TIGR00383 261 LTVVSTIFIPLTFIAGIYG 279 (318)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 5677889999999999984
No 146
>COG1294 AppB Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]
Probab=55.25 E-value=1.4e+02 Score=31.33 Aligned_cols=31 Identities=16% Similarity=-0.081 Sum_probs=16.2
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHhccccCCCc
Q 005931 465 EALQNARNTIILVAILIATVTYTGGISPPGG 495 (669)
Q Consensus 465 ~~~~~~~~~~~~va~liatvtf~a~~~~Pgg 495 (669)
+.-+.+|.+.++++....-++..+.+..+|.
T Consensus 198 rA~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (346)
T COG1294 198 RARKLARIAALLTLVGFLLFGVWVTPGLDGF 228 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3344455555555555555555455555443
No 147
>PF07086 DUF1352: Protein of unknown function (DUF1352); InterPro: IPR009787 This family consists of several hypothetical eukaryotic proteins of around 190 residues in length. The function of this family is unknown.
Probab=54.96 E-value=1.5e+02 Score=28.08 Aligned_cols=19 Identities=16% Similarity=0.316 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHhHHHH
Q 005931 602 LYLGVELIRHRLRKLEWRA 620 (669)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~ 620 (669)
++.+..|+..|..+-+.||
T Consensus 166 lYf~~kL~~aW~~~~~~kk 184 (186)
T PF07086_consen 166 LYFSKKLLDAWQTRTQKKK 184 (186)
T ss_pred HHHHHHHHHHHHhcccccc
Confidence 4466777777755444443
No 148
>PF05399 EVI2A: Ectropic viral integration site 2A protein (EVI2A); InterPro: IPR008608 This family contains several mammalian ectropic viral integration site 2A (EVI2A) proteins. The function of this protein is unknown although it is thought to be a membrane protein and may function as an oncogene in retrovirus induced myeloid tumours [, ].; GO: 0016021 integral to membrane
Probab=54.36 E-value=41 Score=31.99 Aligned_cols=35 Identities=9% Similarity=0.107 Sum_probs=22.3
Q ss_pred HHhHHHHhhhCC-CCccccccccccccccccccCCC
Q 005931 614 RKLEWRAKKLGK-QSKVGVIRGRIQSHYTKFKPKNK 648 (669)
Q Consensus 614 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 648 (669)
|+.+...||.+| ..-+-+-+|.|++.-.-|+++..
T Consensus 162 KrskQ~gKRqpRSNGDFLASSgLWPa~sdTWkRakq 197 (227)
T PF05399_consen 162 KRSKQVGKRQPRSNGDFLASSGLWPAESDTWKRAKQ 197 (227)
T ss_pred HHHHHhhccCCCcccceeeccccCccccchhhhhhh
Confidence 444443445555 33344568999999889988654
No 149
>PRK12438 hypothetical protein; Provisional
Probab=54.30 E-value=2.5e+02 Score=33.83 Aligned_cols=15 Identities=20% Similarity=0.246 Sum_probs=12.9
Q ss_pred CCccccCCCccceee
Q 005931 503 KGKSLVGRTKAFKIF 517 (669)
Q Consensus 503 ~g~~~~~~~~~f~~F 517 (669)
.-+|+++....|.+|
T Consensus 149 ~~DP~Fg~DigFYvF 163 (991)
T PRK12438 149 IVDPEFGYDIGFYVF 163 (991)
T ss_pred CCCCCCCCcceEEEE
Confidence 357999999999998
No 150
>COG2194 Predicted membrane-associated, metal-dependent hydrolase [General function prediction only]
Probab=53.79 E-value=65 Score=36.23 Aligned_cols=13 Identities=23% Similarity=0.192 Sum_probs=5.3
Q ss_pred HHHHHHHHHHhhh
Q 005931 561 ISFMATAYIAATR 573 (669)
Q Consensus 561 ~~~~~~a~~~~~~ 573 (669)
+++-.++|.+..|
T Consensus 79 l~sa~asy~~~~y 91 (555)
T COG2194 79 LVSAAASYFAYFY 91 (555)
T ss_pred HHHHHHHHHHHHh
Confidence 3333444444443
No 151
>PF03699 UPF0182: Uncharacterised protein family (UPF0182); InterPro: IPR005372 This family contains uncharacterised integral membrane proteins.; GO: 0016021 integral to membrane
Probab=52.78 E-value=3.5e+02 Score=31.82 Aligned_cols=46 Identities=17% Similarity=0.225 Sum_probs=25.9
Q ss_pred HhhhhHHHHHHHHHHHHHhccccCCCccCCC------C--CCCCccccCCCccceee
Q 005931 469 NARNTIILVAILIATVTYTGGISPPGGVYQE------G--PLKGKSLVGRTKAFKIF 517 (669)
Q Consensus 469 ~~~~~~~~va~liatvtf~a~~~~Pgg~~~~------~--~~~g~~~~~~~~~f~~F 517 (669)
..+..++++.+++.++.++..+.- . |+. + -..-+|++++...|.+|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~--~-W~~~L~f~n~~~Fg~~DP~Fg~Di~FYvF 153 (774)
T PF03699_consen 100 PRRRWVIIGVSLVLGLFAGLSASS--Q-WETILLFLNGTPFGITDPIFGKDISFYVF 153 (774)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--h-HHHHHHHhCCCCCCCCCCCCCCCceeeee
Confidence 344455555555555544443322 2 332 1 12357999999999998
No 152
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=52.64 E-value=1.2e+02 Score=28.24 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 005931 548 RLLVITHKVMWVSISFMATAYIAATRITVPDD 579 (669)
Q Consensus 548 ~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 579 (669)
.+++++...+++.+-++++||++++-++-|..
T Consensus 82 alimi~iAs~llP~PsLVIaYCl~mqi~~~~~ 113 (189)
T PF05313_consen 82 ALIMIIIASLLLPFPSLVIAYCLSMQIYNPGA 113 (189)
T ss_pred HHHHHHHHHHHcCccHHHHHHHHHheeecCCC
Confidence 33444444555566677777777776554443
No 153
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=52.28 E-value=15 Score=32.51 Aligned_cols=6 Identities=33% Similarity=0.872 Sum_probs=2.9
Q ss_pred chhHHH
Q 005931 584 WVTDSL 589 (669)
Q Consensus 584 ~~~~~~ 589 (669)
|+++++
T Consensus 2 W~l~~i 7 (130)
T PF12273_consen 2 WVLFAI 7 (130)
T ss_pred eeeHHH
Confidence 655433
No 154
>PF06011 TRP: Transient receptor potential (TRP) ion channel; InterPro: IPR010308 This family consists of hypothetical proteins of unknown function found in fungi.
Probab=51.87 E-value=69 Score=34.99 Aligned_cols=88 Identities=20% Similarity=0.234 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 005931 527 TSLSIVIILVSIIPFERKKLMRLLVITHKVMWVSISFMATAYIAATRITVPDDRGTGWVTDSLLATGAGTLGFLFLYLGV 606 (669)
Q Consensus 527 ~S~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (669)
..++..+++....|+..+.. ..+.+....+-+-.+.+.++|.-..- +|.. ...|+.++++++-+.+.+++++...+
T Consensus 333 ~e~~~l~~~~~~~Py~~~~~-n~~~~~~~~~~~i~~~l~i~f~~~~~--~~~~-~~~~vg~vi~~i~~~v~~~~~i~~~~ 408 (438)
T PF06011_consen 333 IEVIYLILLFILRPYMDKRT-NVLNIILSVVRLITLFLLIAFLPSLN--LSEI-VRTVVGYVIIIINAIVLLILFILIIV 408 (438)
T ss_pred HHHHHHHHHHHhChhccccc-cHHHHHHHHHHHHHHHHHHHHhcccC--CCcc-ccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 33344444555666665443 33333333444444455556643331 2222 23466666666665555555555555
Q ss_pred HHHHHHHHHhHH
Q 005931 607 ELIRHRLRKLEW 618 (669)
Q Consensus 607 ~~~~~~~~~~~~ 618 (669)
..+....++.++
T Consensus 409 ~~~~~~~~~~~~ 420 (438)
T PF06011_consen 409 STIISLFRKRPD 420 (438)
T ss_pred HHHHHHHHhCcC
Confidence 555554444443
No 155
>PF15086 UPF0542: Uncharacterised protein family UPF0542
Probab=51.36 E-value=30 Score=26.78 Aligned_cols=39 Identities=13% Similarity=-0.039 Sum_probs=22.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 005931 584 WVTDSLLATGAGTLGFLFLYLGVELIRHRLRKLEWRAKK 622 (669)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (669)
|-++..+++++.-++++-.++++.|..+.-++.+.+|+|
T Consensus 20 ~~Fl~~vll~LtPlfiisa~lSwkLaK~ie~~ere~K~k 58 (74)
T PF15086_consen 20 YEFLTTVLLILTPLFIISAVLSWKLAKAIEKEEREKKKK 58 (74)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444455668888887776655555554
No 156
>PLN03218 maturation of RBCL 1; Provisional
Probab=51.35 E-value=1.1e+02 Score=37.62 Aligned_cols=188 Identities=11% Similarity=0.047 Sum_probs=78.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCcccCCCCCC-CChHHHHHHhcCCHHHHHHHH----hcCCccccccCCCCC-hHHHHH
Q 005931 144 TPIYLAISRGHTDIAREILEVRPRFAGKTDKN-GFSPLHYASSIGNVNMTKLLL----NHNKDLALQYNKDGY-TPLHLA 217 (669)
Q Consensus 144 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~-g~t~Lh~Aa~~g~~eiv~~Ll----~~g~~~~~~~~~~g~-tpLh~A 217 (669)
+.+...+..|..+-+..+++.-.......+.. -.+.+...++.|+.+-+..++ +.|..++. .-+ +.+...
T Consensus 584 aLI~ay~k~G~ldeA~elf~~M~e~gi~p~~~tynsLI~ay~k~G~~deAl~lf~eM~~~Gv~PD~----~TynsLI~a~ 659 (1060)
T PLN03218 584 ALMKACANAGQVDRAKEVYQMIHEYNIKGTPEVYTIAVNSCSQKGDWDFALSIYDDMKKKGVKPDE----VFFSALVDVA 659 (1060)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCCH----HHHHHHHHHH
Confidence 34445566666665555544321110011111 123344455566654433333 33332221 112 234445
Q ss_pred HHcCCHHHHHHHHhcC---CCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCC-CcHHHHHHHcCCHH
Q 005931 218 AINGRVKILVAFLSSS---PASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFG-NTVLHLAVLRKNYQ 293 (669)
Q Consensus 218 a~~g~~e~v~~LL~~~---~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G-~TpLh~A~~~~~~~ 293 (669)
++.|+.+....++... +...+. ....+.+...++.|+.+-+..+++......+ .+|..- ++.+...++.|+.+
T Consensus 660 ~k~G~~eeA~~l~~eM~k~G~~pd~--~tynsLI~ay~k~G~~eeA~~lf~eM~~~g~-~PdvvtyN~LI~gy~k~G~~e 736 (1060)
T PLN03218 660 GHAGDLDKAFEILQDARKQGIKLGT--VSYSSLMGACSNAKNWKKALELYEDIKSIKL-RPTVSTMNALITALCEGNQLP 736 (1060)
T ss_pred HhCCCHHHHHHHHHHHHHcCCCCCH--HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHCCCHH
Confidence 5666665544444321 111111 1122344555566776655555443211000 122222 23334445666655
Q ss_pred HHHHHHH---hcCcccccccCCCCCHHHHHHHcCCCchHHHHHHHHHHhC
Q 005931 294 FVEYIIK---ETVLDIYCRNHKNQTALDIIEQAGTNDDATSLKKLFKTAG 340 (669)
Q Consensus 294 iv~~Ll~---~~~~d~~~~n~~g~T~L~~a~~~~~~~~~~~l~~~l~~~~ 340 (669)
-+..+++ ..|+.++.... .+.++...+.+..+.+..+...+...|
T Consensus 737 eAlelf~eM~~~Gi~Pd~~Ty--~sLL~a~~k~G~le~A~~l~~~M~k~G 784 (1060)
T PLN03218 737 KALEVLSEMKRLGLCPNTITY--SILLVASERKDDADVGLDLLSQAKEDG 784 (1060)
T ss_pred HHHHHHHHHHHcCCCCCHHHH--HHHHHHHHHCCCHHHHHHHHHHHHHcC
Confidence 4433332 23444433211 123444555566666666666655554
No 157
>PRK00068 hypothetical protein; Validated
Probab=50.29 E-value=4.4e+02 Score=31.78 Aligned_cols=15 Identities=20% Similarity=0.357 Sum_probs=12.9
Q ss_pred CCccccCCCccceee
Q 005931 503 KGKSLVGRTKAFKIF 517 (669)
Q Consensus 503 ~g~~~~~~~~~f~~F 517 (669)
.-+|+++....|.+|
T Consensus 147 ~~DP~Fg~DigFY~F 161 (970)
T PRK00068 147 VKDPQFGKDLSFYAF 161 (970)
T ss_pred CCCCCCCCcceEEEE
Confidence 457999999999998
No 158
>TIGR02921 PEP_integral PEP-CTERM family integral membrane protein. Members of this protein family, found in three different species so far, have a PEP-CTERM sequence at the carboxyl-terminus (see model TIGR02595), but are unusual among PEP-CTERM proteins in having multiple predicted transmembrane segments. The function is unknown. It is proposed that a member of the EpsH family, to be designated exosortase (see TIGR02602), recognizes and cleaves PEP-CTERM proteins in a manner analogous to the cleavage of LPXTG proteins by sortase (see Haft, et al., 2006).
Probab=50.28 E-value=3.9e+02 Score=29.92 Aligned_cols=26 Identities=31% Similarity=0.454 Sum_probs=19.4
Q ss_pred hhHHHHHHHHHHHHHhccccCCCccCCC
Q 005931 472 NTIILVAILIATVTYTGGISPPGGVYQE 499 (669)
Q Consensus 472 ~~~~~va~liatvtf~a~~~~Pgg~~~~ 499 (669)
.+..++-.+||-.+|+|-+ =|||...
T Consensus 107 ~s~ili~~~i~i~a~~~~l--~~g~~sr 132 (952)
T TIGR02921 107 SSHILINIGIAIAAFAACL--FGGVASR 132 (952)
T ss_pred hhhHHHHHHHHHHHHHHHH--hhcchhc
Confidence 4567788899999998875 4777543
No 159
>PRK02509 hypothetical protein; Provisional
Probab=49.73 E-value=2.1e+02 Score=34.17 Aligned_cols=15 Identities=40% Similarity=0.696 Sum_probs=13.0
Q ss_pred CCccccCCCccceee
Q 005931 503 KGKSLVGRTKAFKIF 517 (669)
Q Consensus 503 ~g~~~~~~~~~f~~F 517 (669)
..+|+++....|.+|
T Consensus 221 ~~DP~Fg~DisFYvF 235 (973)
T PRK02509 221 ETDPLFGRDISFYIF 235 (973)
T ss_pred CCCCCCCCCcEEEEE
Confidence 467999999999988
No 160
>PRK10263 DNA translocase FtsK; Provisional
Probab=48.34 E-value=2.3e+02 Score=35.18 Aligned_cols=23 Identities=17% Similarity=0.248 Sum_probs=11.7
Q ss_pred HHHHhhhhHHHHHH---HHHHHHHhc
Q 005931 466 ALQNARNTIILVAI---LIATVTYTG 488 (669)
Q Consensus 466 ~~~~~~~~~~~va~---liatvtf~a 488 (669)
++.+....++++.+ ++|-+||..
T Consensus 21 rL~E~~gIlLlllAlfL~lALiSYsP 46 (1355)
T PRK10263 21 RLLEALLILIVLFAVWLMAALLSFNP 46 (1355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 34445544444444 455566655
No 161
>KOG4026 consensus Uncharacterized conserved protein [Function unknown]
Probab=47.94 E-value=2.2e+02 Score=27.12 Aligned_cols=27 Identities=11% Similarity=0.070 Sum_probs=19.5
Q ss_pred hhHHHHHHHHHHHHHhccccCCCccCC
Q 005931 472 NTIILVAILIATVTYTGGISPPGGVYQ 498 (669)
Q Consensus 472 ~~~~~va~liatvtf~a~~~~Pgg~~~ 498 (669)
+.+=.+-++.++|.|..+|--|-..++
T Consensus 10 gviW~l~t~c~a~l~~v~fi~P~Wig~ 36 (207)
T KOG4026|consen 10 GVIWALCTICFAVLFMVAFIQPYWIGD 36 (207)
T ss_pred HHHHHHHHHHHHHHHHHHhccceeccC
Confidence 444556678888999999988855544
No 162
>PF10966 DUF2768: Protein of unknown function (DUF2768); InterPro: IPR020076 This entry contains proteins with no known function.
Probab=47.92 E-value=17 Score=26.94 Aligned_cols=20 Identities=25% Similarity=0.561 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHhhhccc
Q 005931 557 MWVSISFMATAYIAATRITV 576 (669)
Q Consensus 557 ~~~~~~~~~~a~~~~~~~~~ 576 (669)
||+|+.+|..=|++.....+
T Consensus 2 MWiS~~~iglMfisv~~i~~ 21 (58)
T PF10966_consen 2 MWISFGAIGLMFISVILIYF 21 (58)
T ss_pred cchHHHHHHHHHHHHHHHHH
Confidence 45555555544444444433
No 163
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]
Probab=47.47 E-value=1.1e+02 Score=31.87 Aligned_cols=19 Identities=21% Similarity=0.177 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 005931 556 VMWVSISFMATAYIAATRI 574 (669)
Q Consensus 556 ~~~~~~~~~~~a~~~~~~~ 574 (669)
+.++|++++..+|++|+|-
T Consensus 265 LTi~s~iflPpTlIagiyG 283 (322)
T COG0598 265 LTIVSTIFLPPTLITGFYG 283 (322)
T ss_pred HHHHHHHHHhhHHHHcccc
Confidence 5667899999999999983
No 164
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=46.73 E-value=41 Score=36.72 Aligned_cols=73 Identities=14% Similarity=0.246 Sum_probs=29.6
Q ss_pred HHHHHhCCHHHHHHHHcCcchhhhcc-cCCCCChHHHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHH
Q 005931 10 SEAIVRNDKQALINLVGCSNKRILLQ-RDASLNTALHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHE 88 (669)
Q Consensus 10 ~~Ai~~gd~~~l~~ll~~~~~~~l~~-~d~~g~T~Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~e 88 (669)
..|+..||.+.+..++. . ..++.. ....|+...++--..|..|+.-.+.. | -++=+.+|...|+++
T Consensus 269 k~av~~~d~~~v~~~i~-~-~~ll~~i~~~~~~~i~~fL~~~G~~e~AL~~~~---D--------~~~rFeLAl~lg~L~ 335 (443)
T PF04053_consen 269 KTAVLRGDFEEVLRMIA-A-SNLLPNIPKDQGQSIARFLEKKGYPELALQFVT---D--------PDHRFELALQLGNLD 335 (443)
T ss_dssp HHHHHTT-HHH-----H-H-HHTGGG--HHHHHHHHHHHHHTT-HHHHHHHSS------------HHHHHHHHHHCT-HH
T ss_pred HHHHHcCChhhhhhhhh-h-hhhcccCChhHHHHHHHHHHHCCCHHHHHhhcC---C--------hHHHhHHHHhcCCHH
Confidence 34566666666655554 1 112211 12334455555555555555433221 1 123455666666666
Q ss_pred HHHHHHh
Q 005931 89 VSAFLME 95 (669)
Q Consensus 89 ivk~Ll~ 95 (669)
.+.-+.+
T Consensus 336 ~A~~~a~ 342 (443)
T PF04053_consen 336 IALEIAK 342 (443)
T ss_dssp HHHHHCC
T ss_pred HHHHHHH
Confidence 6555554
No 165
>PRK00733 hppA membrane-bound proton-translocating pyrophosphatase; Validated
Probab=45.40 E-value=67 Score=36.44 Aligned_cols=14 Identities=7% Similarity=0.185 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHhc
Q 005931 475 ILVAILIATVTYTG 488 (669)
Q Consensus 475 ~~va~liatvtf~a 488 (669)
+.+++.+|++..++
T Consensus 211 Sy~~sivaamilg~ 224 (666)
T PRK00733 211 SYAVTIVAAMVLGA 224 (666)
T ss_pred HHHHHHHHHHHHhh
Confidence 35788889988886
No 166
>PF04238 DUF420: Protein of unknown function (DUF420); InterPro: IPR007352 This is a predicted membrane protein with four transmembrane helices.
Probab=45.10 E-value=2.2e+02 Score=25.28 Aligned_cols=29 Identities=24% Similarity=0.227 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHhhhCCCC
Q 005931 599 FLFLYLGVELIRHRLRKLEWRAKKLGKQS 627 (669)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (669)
.+-+.+....+..-+|+...|=||.||-+
T Consensus 86 ~~~~pL~l~tl~~a~~~~~~~Hrki~r~t 114 (133)
T PF04238_consen 86 IVALPLVLYTLYRALRGRFTRHRKIGRWT 114 (133)
T ss_pred HHHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 33444555555666677777777777644
No 167
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=44.93 E-value=1.7e+02 Score=30.38 Aligned_cols=50 Identities=8% Similarity=0.105 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005931 560 SISFMATAYIAATRITVPDDRGTGWVTDSLLATGAGTLGFLFLYLGVELIRHRLRK 615 (669)
Q Consensus 560 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (669)
.++.+++|+..|+..|.. .+-.|.-+.. ++++++.+.++.+..+..-+.+
T Consensus 218 ~f~~l~~A~~v~lSRV~D--YkHHwsDV~a----G~liG~~~A~~~~~~v~~~f~~ 267 (317)
T KOG3030|consen 218 QFLPLMLALLVGLSRVSD--YKHHWSDVLA----GALIGAFVAYFLYRYVFPNFKD 267 (317)
T ss_pred HHHHHHHHHHHeeehhcc--cccccHHHHH----HHHHHHHHHHHHHhhhcchhhc
Confidence 455788899999999884 4445655533 2333344444444444444444
No 168
>PF10066 DUF2304: Uncharacterized conserved protein (DUF2304); InterPro: IPR019277 This entry represents hypothetical archaeal and bacterial proteins that have no known function.
Probab=43.16 E-value=1.9e+02 Score=24.91 Aligned_cols=8 Identities=13% Similarity=0.285 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q 005931 523 IALFTSLS 530 (669)
Q Consensus 523 ~a~~~S~~ 530 (669)
++...|+.
T Consensus 7 i~i~~~v~ 14 (115)
T PF10066_consen 7 ILIIIAVL 14 (115)
T ss_pred HHHHHHHH
Confidence 33334433
No 169
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=42.69 E-value=8.2 Score=38.20 Aligned_cols=14 Identities=14% Similarity=0.138 Sum_probs=0.0
Q ss_pred CCCCcchhHHHHHH
Q 005931 579 DRGTGWVTDSLLAT 592 (669)
Q Consensus 579 ~~~~~~~~~~~~~~ 592 (669)
..+.+|+.+...++
T Consensus 131 ~~GAs~WtiLaFcL 144 (381)
T PF05297_consen 131 ELGASFWTILAFCL 144 (381)
T ss_dssp --------------
T ss_pred HhhhHHHHHHHHHH
Confidence 33444444433333
No 170
>PRK10747 putative protoheme IX biogenesis protein; Provisional
Probab=41.82 E-value=54 Score=35.26 Aligned_cols=9 Identities=11% Similarity=-0.333 Sum_probs=3.5
Q ss_pred HHHHHHHhh
Q 005931 564 MATAYIAAT 572 (669)
Q Consensus 564 ~~~a~~~~~ 572 (669)
..++.-.|.
T Consensus 19 ~~~~~~~Gy 27 (398)
T PRK10747 19 PMIAGHQGY 27 (398)
T ss_pred HHHcCCCCe
Confidence 333344443
No 171
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=41.33 E-value=47 Score=27.70 Aligned_cols=13 Identities=31% Similarity=0.340 Sum_probs=9.4
Q ss_pred CCCCccccccccc
Q 005931 624 GKQSKVGVIRGRI 636 (669)
Q Consensus 624 ~~~~~~~~~~~~~ 636 (669)
.+++.|..++|-.
T Consensus 45 ~kGD~VvT~gGi~ 57 (97)
T COG1862 45 KKGDEVVTIGGIV 57 (97)
T ss_pred cCCCEEEEcCCeE
Confidence 7788888877643
No 172
>PRK09546 zntB zinc transporter; Reviewed
Probab=40.84 E-value=87 Score=32.58 Aligned_cols=19 Identities=11% Similarity=0.298 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 005931 556 VMWVSISFMATAYIAATRI 574 (669)
Q Consensus 556 ~~~~~~~~~~~a~~~~~~~ 574 (669)
+.++++++|..+|++|+|-
T Consensus 267 Ltilt~IflPlT~IaGiyG 285 (324)
T PRK09546 267 MSLMAMVFLPTTFLTGLFG 285 (324)
T ss_pred HHHHHHHHHHHHHHHhhhc
Confidence 5667788889999999984
No 173
>PF03669 UPF0139: Uncharacterised protein family (UPF0139); InterPro: IPR005351 This is a small family of proteins of unknown function which appear to be related to the hypothetical protein CG10674 from Drosophila melanogaster (Fruit fly)(Q9VRJ8 from SWISSPROT).
Probab=40.69 E-value=1.4e+02 Score=25.26 Aligned_cols=37 Identities=11% Similarity=0.314 Sum_probs=24.0
Q ss_pred hhhhHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 005931 519 ISNNIALFTSLSIVIILVSIIPFERKKLMRLLVITHKVMWVSISFMATAYIAAT 572 (669)
Q Consensus 519 ~~~~~a~~~S~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~ 572 (669)
+.|++++..+++.+++ |.|. +-|+|+++-+.+|+-.-
T Consensus 34 y~~~L~~~~~m~gl~m-------r~K~----------~aW~al~~s~~S~an~k 70 (103)
T PF03669_consen 34 YMSFLGMIFSMAGLMM-------RNKW----------CAWAALFFSCQSFANMK 70 (103)
T ss_pred HHHHHHHHHHHHHHHH-------HhHH----------HHHHHHHHHHHHHHcCC
Confidence 5677888888776665 2221 56778877777766553
No 174
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=40.24 E-value=59 Score=35.50 Aligned_cols=161 Identities=19% Similarity=0.139 Sum_probs=88.4
Q ss_pred HHHHHHcCCHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCcHHHHHHHcCCHHH
Q 005931 44 LHLAARFGHVELVTEITKLCPELVAAENEKLETPLHEACCQGNHEVSAFLMEANPTVATKLNHESQSAFSLACRQGHLDV 123 (669)
Q Consensus 44 Lh~Aa~~g~~e~vk~Ll~~~~~~~~~~n~~g~TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~ei 123 (669)
+..|+..|+.+-|..+++...-+++.....|+....+--..|..|++-.+.+ +..+=+.+|.+.|+.+.
T Consensus 268 fk~av~~~d~~~v~~~i~~~~ll~~i~~~~~~~i~~fL~~~G~~e~AL~~~~-----------D~~~rFeLAl~lg~L~~ 336 (443)
T PF04053_consen 268 FKTAVLRGDFEEVLRMIAASNLLPNIPKDQGQSIARFLEKKGYPELALQFVT-----------DPDHRFELALQLGNLDI 336 (443)
T ss_dssp HHHHHHTT-HHH-----HHHHTGGG--HHHHHHHHHHHHHTT-HHHHHHHSS------------HHHHHHHHHHCT-HHH
T ss_pred HHHHHHcCChhhhhhhhhhhhhcccCChhHHHHHHHHHHHCCCHHHHHhhcC-----------ChHHHhHHHHhcCCHHH
Confidence 5568888888887666653322223333345556666666666666555543 12355788889999888
Q ss_pred HHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccc
Q 005931 124 VKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLA 203 (669)
Q Consensus 124 v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~ 203 (669)
..-+.+...+.. .....-..|...|+.++++..+++..+. ...+.+....|+.+-++.|.+.-.
T Consensus 337 A~~~a~~~~~~~-----~W~~Lg~~AL~~g~~~lAe~c~~k~~d~--------~~L~lLy~~~g~~~~L~kl~~~a~--- 400 (443)
T PF04053_consen 337 ALEIAKELDDPE-----KWKQLGDEALRQGNIELAEECYQKAKDF--------SGLLLLYSSTGDREKLSKLAKIAE--- 400 (443)
T ss_dssp HHHHCCCCSTHH-----HHHHHHHHHHHTTBHHHHHHHHHHCT-H--------HHHHHHHHHCT-HHHHHHHHHHHH---
T ss_pred HHHHHHhcCcHH-----HHHHHHHHHHHcCCHHHHHHHHHhhcCc--------cccHHHHHHhCCHHHHHHHHHHHH---
Confidence 877765443221 1233455677888888888888865543 134556667777777777764311
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHhcC
Q 005931 204 LQYNKDGYTPLHLAAINGRVKILVAFLSSS 233 (669)
Q Consensus 204 ~~~~~~g~tpLh~Aa~~g~~e~v~~LL~~~ 233 (669)
. ..+-..+++.+...|+.+-...+|...
T Consensus 401 -~-~~~~n~af~~~~~lgd~~~cv~lL~~~ 428 (443)
T PF04053_consen 401 -E-RGDINIAFQAALLLGDVEECVDLLIET 428 (443)
T ss_dssp -H-TT-HHHHHHHHHHHT-HHHHHHHHHHT
T ss_pred -H-ccCHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 0 112234677777777776655666544
No 175
>PLN03218 maturation of RBCL 1; Provisional
Probab=39.90 E-value=2.7e+02 Score=34.26 Aligned_cols=193 Identities=10% Similarity=0.037 Sum_probs=81.9
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCcc--cCCCCCC-CChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCC-hHHHHHHH
Q 005931 144 TPIYLAISRGHTDIAREILEVRPRF--AGKTDKN-GFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGY-TPLHLAAI 219 (669)
Q Consensus 144 t~L~~A~~~g~~~iv~~Ll~~~~~~--~~~~d~~-g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~-tpLh~Aa~ 219 (669)
+.+...+..|..+-+..+++.-... .-..|.. -.+.+...+..|+.+-+..+++.-.......+..-+ +.+...++
T Consensus 547 sLI~a~~k~G~~deA~~lf~eM~~~~~gi~PD~vTynaLI~ay~k~G~ldeA~elf~~M~e~gi~p~~~tynsLI~ay~k 626 (1060)
T PLN03218 547 ALISACGQSGAVDRAFDVLAEMKAETHPIDPDHITVGALMKACANAGQVDRAKEVYQMIHEYNIKGTPEVYTIAVNSCSQ 626 (1060)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHh
Confidence 3455556666666655554422110 0011111 123444556667665444443321111111111112 33445556
Q ss_pred cCCHHHHHHHHhcC---CCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHH
Q 005931 220 NGRVKILVAFLSSS---PASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVE 296 (669)
Q Consensus 220 ~g~~e~v~~LL~~~---~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~ 296 (669)
.|+.+....++..- +..++.. .-.+.+...++.|+.+-+..+++......+.....-.++.++..++.|+.+-..
T Consensus 627 ~G~~deAl~lf~eM~~~Gv~PD~~--TynsLI~a~~k~G~~eeA~~l~~eM~k~G~~pd~~tynsLI~ay~k~G~~eeA~ 704 (1060)
T PLN03218 627 KGDWDFALSIYDDMKKKGVKPDEV--FFSALVDVAGHAGDLDKAFEILQDARKQGIKLGTVSYSSLMGACSNAKNWKKAL 704 (1060)
T ss_pred cCCHHHHHHHHHHHHHcCCCCCHH--HHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCHHHHH
Confidence 67766555554332 1222211 112344455666776655444442211111100112345556666777766555
Q ss_pred HHHHh---cCcccccccCCCCCHHHHHHHcCCCchHHHHHHHHHHhC
Q 005931 297 YIIKE---TVLDIYCRNHKNQTALDIIEQAGTNDDATSLKKLFKTAG 340 (669)
Q Consensus 297 ~Ll~~---~~~d~~~~n~~g~T~L~~a~~~~~~~~~~~l~~~l~~~~ 340 (669)
.+.++ .+..++... -.+-++...+.+..+.+..+.+.+...|
T Consensus 705 ~lf~eM~~~g~~Pdvvt--yN~LI~gy~k~G~~eeAlelf~eM~~~G 749 (1060)
T PLN03218 705 ELYEDIKSIKLRPTVST--MNALITALCEGNQLPKALEVLSEMKRLG 749 (1060)
T ss_pred HHHHHHHHcCCCCCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHcC
Confidence 44432 333333221 1123444455666666666665555444
No 176
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=39.87 E-value=1.9e+02 Score=26.23 Aligned_cols=55 Identities=15% Similarity=0.179 Sum_probs=23.3
Q ss_pred ceeehhhhhHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 005931 514 FKIFEISNNIALFTSLSIVIILVSIIPFERKKLMRLLVITHKVMWVSISFMATAYIAA 571 (669)
Q Consensus 514 f~~F~~~~~~a~~~S~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~ 571 (669)
|..+.+.+.+......+..+.+...+-.|++..++...+ .+.++++.+.+...+.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~l~~~~lffkr~~~~P~~~I~---~ll~~v~~~~l~~~~~ 106 (149)
T PF10754_consen 52 FYALWYFEVAINIAMWLFTLWLLYLFFKRKRRFPKLYII---WLLISVLFIALDAFAF 106 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccchhHHHHHH---HHHHHHHHHHHHHHHH
Confidence 334444444433333333333333223344455554443 4555666455444443
No 177
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=39.80 E-value=20 Score=33.60 Aligned_cols=48 Identities=17% Similarity=0.295 Sum_probs=29.5
Q ss_pred cCCCCcHHHHHHHcCCHHHHH-HHHHhcC--CCCCccCCCCCCcHHHHHHH
Q 005931 241 TTYGETVFHLAVRFDKYNAFK-FLAESFN--TCLFHGQDQFGNTVLHLAVL 288 (669)
Q Consensus 241 d~~g~t~Lh~Av~~~~~~iv~-~Ll~~~~--~~~in~~D~~G~TpLh~A~~ 288 (669)
+.+-++|||-|++-++.+++- |+++... ...+|..|.+|..+|.+|..
T Consensus 219 d~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~ 269 (280)
T KOG4591|consen 219 DGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALC 269 (280)
T ss_pred cCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHH
Confidence 344566777777777777654 3444322 33556667777777777654
No 178
>PTZ00234 variable surface protein Vir12; Provisional
Probab=39.79 E-value=18 Score=38.99 Aligned_cols=18 Identities=33% Similarity=0.431 Sum_probs=13.8
Q ss_pred CCCCCCCccccCCCcCcc
Q 005931 649 PQSDSTNSDVDSSTSVGY 666 (669)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~ 666 (669)
|.+.++|+-+||.+.+=|
T Consensus 416 ~~y~se~~~ldsq~~~~y 433 (433)
T PTZ00234 416 PRYESQQSLAESQMSDAY 433 (433)
T ss_pred cccccccccccccccccC
Confidence 567888999988876644
No 179
>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins.
Probab=39.74 E-value=80 Score=27.57 Aligned_cols=35 Identities=26% Similarity=0.252 Sum_probs=23.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 005931 584 WVTDSLLATGAGTLGFLFLYLGVELIRHRLRKLEW 618 (669)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (669)
|....++++.+.++.+.|+++.++.+.+|+++.++
T Consensus 16 p~~~~~~~~lGN~l~vp~i~~~~~~i~~~l~~~~~ 50 (121)
T PF06695_consen 16 PWEAFLLAFLGNILPVPFILLFLDKILKWLKRKPW 50 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 34445555666677778888888888888765443
No 180
>PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional
Probab=39.52 E-value=2.6e+02 Score=28.97 Aligned_cols=19 Identities=21% Similarity=0.289 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 005931 556 VMWVSISFMATAYIAATRI 574 (669)
Q Consensus 556 ~~~~~~~~~~~a~~~~~~~ 574 (669)
+..+++++|..++++|+|-
T Consensus 259 lTv~s~if~pptliagiyG 277 (316)
T PRK11085 259 FSVVSVVFLPPTLVASSYG 277 (316)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 5667888999999999984
No 181
>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ]. CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. Transporter ZntB mediates efflux of zinc ions [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 2HN1_A 3NWI_D 3NVO_B 3CK6_A 2IUB_E 2BBJ_E 2HN2_A 2BBH_A.
Probab=38.90 E-value=49 Score=33.54 Aligned_cols=20 Identities=15% Similarity=0.208 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHhhhcc
Q 005931 556 VMWVSISFMATAYIAATRIT 575 (669)
Q Consensus 556 ~~~~~~~~~~~a~~~~~~~~ 575 (669)
+.++++++|.++|++|+|-+
T Consensus 237 LT~~t~iflPlt~i~g~fGM 256 (292)
T PF01544_consen 237 LTIVTAIFLPLTFITGIFGM 256 (292)
T ss_dssp HHHHHHHHHHHHHHTTSTTS
T ss_pred HHHHHHHHHHHHHHHHHhhC
Confidence 57778888999999999854
No 182
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=38.69 E-value=2.1e+02 Score=33.64 Aligned_cols=193 Identities=19% Similarity=0.197 Sum_probs=98.0
Q ss_pred hHHHHHHHcCCHHHHHHHHHh------CCccccccCCCCC----------cHHHHHHHcCCHHHHHHHHhhCCccccccC
Q 005931 42 TALHLAARFGHVELVTEITKL------CPELVAAENEKLE----------TPLHEACCQGNHEVSAFLMEANPTVATKLN 105 (669)
Q Consensus 42 T~Lh~Aa~~g~~e~vk~Ll~~------~~~~~~~~n~~g~----------TpLh~Aa~~g~~eivk~Ll~~~~~~~~~~~ 105 (669)
.-+-+|..+|..-+++.|-.- ....+-.-|.++. --+-.|..+.+.+-|-.|++++ +
T Consensus 548 nHikYal~~GD~GIikTLd~~iyitkv~gn~V~cl~rd~~~~~~~IDptEy~FKlALi~k~ydeVl~lI~ns-------~ 620 (1202)
T KOG0292|consen 548 NHIKYALENGDSGIIKTLDKPIYITKVKGNKVFCLNRDGEIECLTIDPTEYRFKLALLNKKYDEVLHLIKNS-------N 620 (1202)
T ss_pred hhhhhhhccCCcceEEecccceEEEEeeCCEEEEEecCCCeEEEeechHHHHHHHHHHhhhhHHHHHHHHhc-------C
Confidence 345577888877777655321 1111222222221 1355677777666666666543 3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHH-HHHH
Q 005931 106 HESQSAFSLACRQGHLDVVKLLINQSWLMEFEEDSVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPL-HYAS 184 (669)
Q Consensus 106 ~~g~tpL~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L-h~Aa 184 (669)
--|+.++-+--+.|..|+.-.+++. ..|-+.+|...|+++++-....... |.+-+.-| ..|.
T Consensus 621 LvGqaiIaYLqKkgypeiAL~FVkD-----------~~tRF~LaLe~gnle~ale~akkld------d~d~w~rLge~Al 683 (1202)
T KOG0292|consen 621 LVGQAIIAYLQKKGYPEIALHFVKD-----------ERTRFELALECGNLEVALEAAKKLD------DKDVWERLGEEAL 683 (1202)
T ss_pred cccHHHHHHHHhcCCcceeeeeecC-----------cchheeeehhcCCHHHHHHHHHhcC------cHHHHHHHHHHHH
Confidence 3455565555555555554433321 2334555666666666544443221 22222233 2344
Q ss_pred hcCCHHHHHHHHhcCCccccc---------------------cCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCC
Q 005931 185 SIGNVNMTKLLLNHNKDLALQ---------------------YNKDGYTPLHLAAINGRVKILVAFLSSSPASFDRLTTY 243 (669)
Q Consensus 185 ~~g~~eiv~~Ll~~g~~~~~~---------------------~~~~g~tpLh~Aa~~g~~e~v~~LL~~~~~~i~~~d~~ 243 (669)
..|+..+++.-.++-...+.. ..++-.+-++.|...|..+--..++..+
T Consensus 684 ~qgn~~IaEm~yQ~~knfekLsfLYliTgn~eKL~Km~~iae~r~D~~~~~qnalYl~dv~ervkIl~n~---------- 753 (1202)
T KOG0292|consen 684 RQGNHQIAEMCYQRTKNFEKLSFLYLITGNLEKLSKMMKIAEIRNDATGQFQNALYLGDVKERVKILENG---------- 753 (1202)
T ss_pred HhcchHHHHHHHHHhhhhhheeEEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHHHHhccHHHHHHHHHhc----------
Confidence 556666666655543221110 0122234455666666666555555544
Q ss_pred CCcHHHH--HHHcCCHHHHHHHHHhcC
Q 005931 244 GETVFHL--AVRFDKYNAFKFLAESFN 268 (669)
Q Consensus 244 g~t~Lh~--Av~~~~~~iv~~Ll~~~~ 268 (669)
|..||-+ |..+|..+..+-|.+...
T Consensus 754 g~~~laylta~~~G~~~~ae~l~ee~~ 780 (1202)
T KOG0292|consen 754 GQLPLAYLTAAAHGLEDQAEKLGEELE 780 (1202)
T ss_pred CcccHHHHHHhhcCcHHHHHHHHHhhc
Confidence 4556655 556787788888877544
No 183
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=37.16 E-value=2.7e+02 Score=28.28 Aligned_cols=15 Identities=20% Similarity=0.198 Sum_probs=6.8
Q ss_pred cchhHHHHHHHHHHH
Q 005931 583 GWVTDSLLATGAGTL 597 (669)
Q Consensus 583 ~~~~~~~~~~~~~~~ 597 (669)
.|+.-.++++++++.
T Consensus 70 ~~~~~~~l~~~Gglw 84 (284)
T PF12805_consen 70 EALEHALLFLAGGLW 84 (284)
T ss_pred HHHHHHHHHHHHHHH
Confidence 454544444444433
No 184
>PF10011 DUF2254: Predicted membrane protein (DUF2254); InterPro: IPR018723 Members of this family of proteins comprises various hypothetical and putative membrane proteins. Their exact function, has not, as yet, been defined.
Probab=37.12 E-value=2.1e+02 Score=30.39 Aligned_cols=21 Identities=19% Similarity=0.112 Sum_probs=14.3
Q ss_pred hHHHHHHHHHHHHHhccccCC
Q 005931 473 TIILVAILIATVTYTGGISPP 493 (669)
Q Consensus 473 ~~~~va~liatvtf~a~~~~P 493 (669)
.+.++|++.|.+++...-..|
T Consensus 11 l~~~~av~la~~~~~ld~~~~ 31 (371)
T PF10011_consen 11 LYAVLAVVLAFLTPYLDRLLP 31 (371)
T ss_pred HHHHHHHHHHHHHHHHHhhcc
Confidence 356677777777777766666
No 185
>PF11457 DUF3021: Protein of unknown function (DUF3021); InterPro: IPR021560 This is a bacterial family of uncharacterised proteins.
Probab=36.52 E-value=3e+02 Score=24.23 Aligned_cols=23 Identities=26% Similarity=0.302 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHh
Q 005931 599 FLFLYLGVELIRHRLRKLEWRAK 621 (669)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~ 621 (669)
++.+|+.+.++.-+..|++-+|.
T Consensus 110 fi~IYliIw~~~y~~~k~~i~ki 132 (136)
T PF11457_consen 110 FIIIYLIIWLIFYLYWKKDIKKI 132 (136)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444445444443
No 186
>PF12271 Chs3p: Chitin synthase III catalytic subunit; InterPro: IPR022057 This family of proteins is found in eukaryotes. Proteins in this family are typically between 288 and 332 amino acids in length. This family is the catalytic domain of chitin synthase III. Chitin is a major component of fungal cell walls and this enzyme is responsible for its formation.
Probab=36.09 E-value=3.8e+02 Score=27.34 Aligned_cols=37 Identities=14% Similarity=0.010 Sum_probs=21.8
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 005931 579 DRGTGWVTDSLLATGAGTLGFLFLYLGVELIRHRLRKL 616 (669)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (669)
..+..++++ ++.++=.+.+++++.++..++...++.+
T Consensus 182 ~~~~~~Lfv-l~~l~p~i~l~~Y~v~q~~lv~~vL~e~ 218 (293)
T PF12271_consen 182 PTNTIALFV-LYYLLPAIFLVIYVVLQLILVLRVLGER 218 (293)
T ss_pred CCCcchhHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 334444444 3344445677778888888877665443
No 187
>PLN00148 potassium transporter; Provisional
Probab=36.06 E-value=1.5e+02 Score=34.66 Aligned_cols=19 Identities=21% Similarity=0.380 Sum_probs=16.4
Q ss_pred hhhhHHHHHHHHHHHHHhc
Q 005931 470 ARNTIILVAILIATVTYTG 488 (669)
Q Consensus 470 ~~~~~~~va~liatvtf~a 488 (669)
..|+++.+++++.|+.|+-
T Consensus 396 ~vNw~Lmv~~i~vv~~F~~ 414 (785)
T PLN00148 396 EINWILMILTLAVTIGFRD 414 (785)
T ss_pred HHHHHHHHHHHHhheeecc
Confidence 3689999999999999953
No 188
>PF06687 SUR7: SUR7/PalI family; InterPro: IPR009571 This family consists of several fungal-specific SUR7 proteins. Its activity regulates expression of RVS161, a homologue of human endophilin, suggesting a function for both in endocytosis [, ]. The protein carries four transmembrane domains and is thus likely to act as an anchoring protein for the eisosome to the plasma membrane. Eisosomes are the immobile protein complexes, that include the proteins Pil1 and Lsp1, which co-localise with sites of protein and lipid endocytosis at the plasma membrane. SUR7 protein may play a role in sporulation []. Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This family also includes PalI which is part of a pH signal transduction cascade. Based on the similarity of PalI to the yeast Rim9 meiotic signal transduction component it has been suggested that PalI might be a membrane sensor for ambient pH [].
Probab=35.93 E-value=1.4e+02 Score=28.73 Aligned_cols=18 Identities=28% Similarity=0.337 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 005931 556 VMWVSISFMATAYIAATR 573 (669)
Q Consensus 556 ~~~~~~~~~~~a~~~~~~ 573 (669)
+.+++..+++++++....
T Consensus 156 ~s~~a~~~~lva~~i~t~ 173 (212)
T PF06687_consen 156 LSLLAFIFLLVAAIIATA 173 (212)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444444444444443
No 189
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=35.80 E-value=2.4e+02 Score=24.37 Aligned_cols=25 Identities=0% Similarity=0.072 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 005931 547 MRLLVITHKVMWVSISFMATAYIAA 571 (669)
Q Consensus 547 ~~~l~~~~~~~~~~~~~~~~a~~~~ 571 (669)
++.+.++..++++..+.++++....
T Consensus 41 wK~I~la~~Lli~G~~li~~g~l~~ 65 (115)
T PF05915_consen 41 WKSIALAVFLLIFGTVLIIIGLLLF 65 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555444333
No 190
>TIGR00540 hemY_coli hemY protein. This is an uncharacterized protein encoded next to a heme-biosynthetic enzyme in two gamma division proteobacteria (E. coli and H. influenzae). It is known in no other species. The gene symbol hemY is unfortunate in that an unrelated protein, protoporphyrinogen oxidase, is designated as HemG in E. coli but as HemY in Bacillus subtilis.
Probab=35.53 E-value=96 Score=33.47 Aligned_cols=13 Identities=8% Similarity=-0.358 Sum_probs=5.5
Q ss_pred HHHHHHHHhhhcc
Q 005931 563 FMATAYIAATRIT 575 (669)
Q Consensus 563 ~~~~a~~~~~~~~ 575 (669)
++.+++-.|..++
T Consensus 18 ~~~~~~~~Gyv~i 30 (409)
T TIGR00540 18 GPMIAGHQGYVLI 30 (409)
T ss_pred HHHHcCCCCeEEE
Confidence 3444444444333
No 191
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=35.11 E-value=90 Score=24.02 Aligned_cols=9 Identities=11% Similarity=0.379 Sum_probs=4.8
Q ss_pred CCCcchhHH
Q 005931 580 RGTGWVTDS 588 (669)
Q Consensus 580 ~~~~~~~~~ 588 (669)
+...|.+|-
T Consensus 29 sp~qW~aIG 37 (68)
T PF04971_consen 29 SPSQWAAIG 37 (68)
T ss_pred CcccchhHH
Confidence 334586653
No 192
>PF14163 SieB: Superinfection exclusion protein B
Probab=34.44 E-value=1.7e+02 Score=26.51 Aligned_cols=15 Identities=7% Similarity=0.239 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHhhhc
Q 005931 560 SISFMATAYIAATRI 574 (669)
Q Consensus 560 ~~~~~~~a~~~~~~~ 574 (669)
.+++|-..+...+.+
T Consensus 11 ~llf~P~~~~~~l~l 25 (151)
T PF14163_consen 11 LLLFLPESLLEWLNL 25 (151)
T ss_pred HHHHCCHHHHHHhCc
Confidence 344455555555444
No 193
>PF09835 DUF2062: Uncharacterized protein conserved in bacteria (DUF2062); InterPro: IPR018639 This domain, found in various prokaryotic proteins, has no known function. It is found at the C-terminal of family 2 glycosyltransferase proteins, in addition to proteins of unknown function.
Probab=34.14 E-value=3.6e+02 Score=24.41 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 005931 590 LATGAGTLGFLFLYLGVELIRHRLRKLEWRAKK 622 (669)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (669)
.++++.+..+++..+.|.+++...++.+.||+|
T Consensus 120 ~~~G~~i~~~v~~~i~Y~l~~~~~~~~r~~r~~ 152 (154)
T PF09835_consen 120 FLLGSLILGIVLGIISYFLVYFLVRKYRKRRRK 152 (154)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444555556666666666666665555544
No 194
>TIGR00947 2A73 probable bicarbonate transporter, IctB family. This family of proteins is suggested to transport inorganic carbon (HCO3-), based on the phenotype of a mutant of IctB in Synechococcus sp. strain PCC 7942. Bicarbonate uptake is used by many photosynthetic organisms including cyanobacteria. These organisms are able to concentrate CO2/HCO3- against a greater than ten-fold concentration gradient. Cyanobacteria may have several such carriers operating with different efficiencies. Note that homology to various O-antigen ligases, with possible implications for mutant cell envelope structure, might allow alternatives to the interpretation of IctB as a bicarbonate transport protein.
Probab=34.03 E-value=3.9e+02 Score=29.00 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=14.9
Q ss_pred ccceeehhhhhHHHHHHHHHHHHHH
Q 005931 512 KAFKIFEISNNIALFTSLSIVIILV 536 (669)
Q Consensus 512 ~~f~~F~~~~~~a~~~S~~~~~~l~ 536 (669)
..|-.|.=-|..|.+..++..+.+.
T Consensus 163 Rv~g~f~npN~la~~L~~~lpl~l~ 187 (425)
T TIGR00947 163 RVYSYLGNPNLLAGYLVPAIPLSLV 187 (425)
T ss_pred eeeecCCChHHHHHHHHHHHHHHHH
Confidence 3344566677777776665544443
No 195
>TIGR02184 Myco_arth_vir_N Mycoplasma virulence family signal region. This model represents the N-terminal region, including a probable signal sequence or signal anchor which in most instances has four consecutive Lys residues before the hydrophobic stretch, of a family of large, virulence-associated proteins in Mycoplasma arthritidis and smaller proteins in Mycoplasma capricolum.
Probab=33.59 E-value=25 Score=22.64 Aligned_cols=22 Identities=32% Similarity=0.537 Sum_probs=17.3
Q ss_pred HhhhhHHHHHHHHHHHHHhccc
Q 005931 469 NARNTIILVAILIATVTYTGGI 490 (669)
Q Consensus 469 ~~~~~~~~va~liatvtf~a~~ 490 (669)
+..-++.++|+|++++||.+.+
T Consensus 9 nkIl~~al~a~l~~S~s~g~Vi 30 (33)
T TIGR02184 9 NKIATLVIVTSLLTSLTISGVI 30 (33)
T ss_pred hheehHHHHHHHHHhheeeeEE
Confidence 4456788999999999997643
No 196
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=33.49 E-value=46 Score=30.96 Aligned_cols=28 Identities=25% Similarity=0.347 Sum_probs=19.8
Q ss_pred eeehhhhhHHHHHHHHHHHH-HHhcccch
Q 005931 515 KIFEISNNIALFTSLSIVII-LVSIIPFE 542 (669)
Q Consensus 515 ~~F~~~~~~a~~~S~~~~~~-l~~~~~~~ 542 (669)
.-|.++|.+|..+-+.+|.. .+.|..+|
T Consensus 38 ~eY~vsNiisv~Sgll~I~~GI~AIvlSr 66 (188)
T PF12304_consen 38 LEYAVSNIISVTSGLLSIICGIVAIVLSR 66 (188)
T ss_pred ehhhHHHHHHHHHHHHHHHHhHHHHhhhc
Confidence 45789999999998887766 33344444
No 197
>PF11241 DUF3043: Protein of unknown function (DUF3043); InterPro: IPR021403 Some members in this family of proteins with unknown function are annotated as membrane proteins. This cannot be confirmed.
Probab=33.44 E-value=3.2e+02 Score=25.45 Aligned_cols=18 Identities=17% Similarity=0.346 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 005931 552 ITHKVMWVSISFMATAYI 569 (669)
Q Consensus 552 ~~~~~~~~~~~~~~~a~~ 569 (669)
+|-.+|.++++.|++.|+
T Consensus 77 i~e~fmP~alv~lv~~~v 94 (170)
T PF11241_consen 77 IGEFFMPVALVLLVLSFV 94 (170)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 344456666666666666
No 198
>PLN00150 potassium ion transporter family protein; Provisional
Probab=33.39 E-value=1.1e+02 Score=35.71 Aligned_cols=18 Identities=28% Similarity=0.398 Sum_probs=15.9
Q ss_pred hhhHHHHHHHHHHHHHhc
Q 005931 471 RNTIILVAILIATVTYTG 488 (669)
Q Consensus 471 ~~~~~~va~liatvtf~a 488 (669)
.|+++.+++++.|+.|..
T Consensus 414 vNw~Lmv~~i~vv~~F~~ 431 (779)
T PLN00150 414 INWILMVLCLVITAGFRD 431 (779)
T ss_pred HHHHHHHHHHhheEEecC
Confidence 689999999999999953
No 199
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=33.36 E-value=81 Score=32.32 Aligned_cols=26 Identities=19% Similarity=0.197 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHH
Q 005931 595 GTLGFLFLYLGVELIRHRLRKLEWRA 620 (669)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (669)
.+++++++.+-+.||.+..||++.++
T Consensus 264 aIliIVLIMvIIYLILRYRRKKKmkK 289 (299)
T PF02009_consen 264 AILIIVLIMVIIYLILRYRRKKKMKK 289 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhH
Confidence 34444444444445544445444433
No 200
>PLN00151 potassium transporter; Provisional
Probab=32.98 E-value=1.5e+02 Score=34.66 Aligned_cols=18 Identities=22% Similarity=0.396 Sum_probs=15.9
Q ss_pred hhhHHHHHHHHHHHHHhc
Q 005931 471 RNTIILVAILIATVTYTG 488 (669)
Q Consensus 471 ~~~~~~va~liatvtf~a 488 (669)
.|+++.+++++.|+.|+-
T Consensus 474 vNw~Lmv~~i~v~l~F~~ 491 (852)
T PLN00151 474 INWFLLVMCLVVVCSFRS 491 (852)
T ss_pred HHHHHHHHHHhheeeecC
Confidence 689999999999999953
No 201
>PLN00149 potassium transporter; Provisional
Probab=32.77 E-value=1.3e+02 Score=34.94 Aligned_cols=17 Identities=24% Similarity=0.304 Sum_probs=15.5
Q ss_pred hhhHHHHHHHHHHHHHh
Q 005931 471 RNTIILVAILIATVTYT 487 (669)
Q Consensus 471 ~~~~~~va~liatvtf~ 487 (669)
.|+++.+++++.|+.|.
T Consensus 401 vNw~Lmv~~i~vv~~F~ 417 (779)
T PLN00149 401 INWTLMLLCLAVTVGFR 417 (779)
T ss_pred HHHHHHHHHHhheeEec
Confidence 68999999999999995
No 202
>PF11137 DUF2909: Protein of unknown function (DUF2909); InterPro: IPR021313 This is a family of proteins conserved in Proteobacteria of unknown function.
Probab=32.08 E-value=2.3e+02 Score=21.59 Aligned_cols=21 Identities=14% Similarity=0.148 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHhhhccccCC
Q 005931 559 VSISFMATAYIAATRITVPDD 579 (669)
Q Consensus 559 ~~~~~~~~a~~~~~~~~~~~~ 579 (669)
+.+.+++++-.+|.+..+.++
T Consensus 7 ~lll~ii~sL~saL~~l~kd~ 27 (63)
T PF11137_consen 7 LLLLAIIASLFSALFFLVKDK 27 (63)
T ss_pred HHHHHHHHHHHHHHHHHhhCC
Confidence 344556666667777666553
No 203
>PF12442 DUF3681: Protein of unknown function (DUF3681) ; InterPro: IPR022149 This family of proteins is found in eukaryotes. Proteins in this family are typically between 112 and 212 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=31.69 E-value=1.3e+02 Score=25.45 Aligned_cols=30 Identities=23% Similarity=0.416 Sum_probs=15.9
Q ss_pred hhhhHHHHHHHHHH-HHHhccccCC--CccCCC
Q 005931 470 ARNTIILVAILIAT-VTYTGGISPP--GGVYQE 499 (669)
Q Consensus 470 ~~~~~~~va~liat-vtf~a~~~~P--gg~~~~ 499 (669)
.+..|..+.++-++ .+..+.|.|| ||+.++
T Consensus 8 l~~aL~~~Gv~tas~A~~la~~~~P~~~g~f~~ 40 (104)
T PF12442_consen 8 LPRALGAVGVATASMAIALAVFKPPPCGGVFNH 40 (104)
T ss_pred HHHHHHHccHHHHHHHHHHHHhcCCccceeccc
Confidence 34445554444333 3344447888 777664
No 204
>PTZ00370 STEVOR; Provisional
Probab=31.32 E-value=86 Score=31.53 Aligned_cols=13 Identities=8% Similarity=-0.028 Sum_probs=7.1
Q ss_pred HHHHHHHHHHhhh
Q 005931 561 ISFMATAYIAATR 573 (669)
Q Consensus 561 ~~~~~~a~~~~~~ 573 (669)
++..+.+++.|+|
T Consensus 242 lagtAAtaAsaaF 254 (296)
T PTZ00370 242 LAGTAASAASSAF 254 (296)
T ss_pred ccchHHHHHHHhh
Confidence 4445556666654
No 205
>PF03030 H_PPase: Inorganic H+ pyrophosphatase; InterPro: IPR004131 Two types of proteins that hydrolyse inorganic pyrophosphate (PPi), very different in both amino acid sequence and structure, have been characterised to date: soluble and membrane-bound proton-pumping pyrophosphatases (sPPases and H(+)-PPases, respectively). sPPases are ubiquitous proteins that hydrolyse PPi to release heat, whereas H+-PPases, so far unidentified in animal and fungal cells, couple the energy of PPi hydrolysis to proton movement across biological membranes [, ]. The latter type is represented by this group of proteins. H+-PPases (3.6.1.1 from EC) are also called vacuolar-type inorganic pyrophosphatases (V-PPase) or pyrophosphate-energised vacuolar membrane proton pumps []. In plants, vacuoles contain two enzymes for acidifying the interior of the vacuole, the V-ATPase and the V-PPase (V is for vacuolar) []. Two distinct biochemical subclasses of H+-PPases have been characterised to date: K+-stimulated and K+-insensitive [, ]. For additional information please see [, ].; GO: 0004427 inorganic diphosphatase activity, 0009678 hydrogen-translocating pyrophosphatase activity, 0015992 proton transport, 0016020 membrane; PDB: 4A01_A.
Probab=30.26 E-value=2.4e+02 Score=32.47 Aligned_cols=74 Identities=11% Similarity=-0.007 Sum_probs=36.6
Q ss_pred hhhhhHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--ccCCCCCcchhHHHHHHH
Q 005931 518 EISNNIALFTSLSIVIILVSIIPFERKKLMRLLVITHKVMWVSISFMATAYIAATRIT--VPDDRGTGWVTDSLLATG 593 (669)
Q Consensus 518 ~~~~~~a~~~S~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~ 593 (669)
++...+.+.+|++.+++.-..-....+...+.|..+ +...++++++..|....++. ........|+.+.+..+.
T Consensus 260 l~i~~~gii~Siig~~~v~~~~~~~~~~~~~aL~~g--~~vs~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 335 (682)
T PF03030_consen 260 LLIAAVGIIASIIGIFFVRTKKGATSKDPMKALRRG--YIVSSILSIILFFFLTYWLLGFSFFGSGISWWGLFGCVLI 335 (682)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT---SGGGHHHHHHHH--HHHHHHHHHHHHHHHHHHHSEETTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHheeEEEecCCccccCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcccccCCcchHHHHHHHHH
Confidence 444557888887766654332222123455666665 33335555666666665554 111223345555444444
No 206
>MTH00033 CYTB cytochrome b; Provisional
Probab=30.12 E-value=7.1e+02 Score=26.63 Aligned_cols=53 Identities=13% Similarity=0.276 Sum_probs=25.2
Q ss_pred HHHhhhhHHHHHHHHHHHHHhcc----ccCCCccCCCCCCCCccccCCCccceeehhhh
Q 005931 467 LQNARNTIILVAILIATVTYTGG----ISPPGGVYQEGPLKGKSLVGRTKAFKIFEISN 521 (669)
Q Consensus 467 ~~~~~~~~~~va~liatvtf~a~----~~~Pgg~~~~~~~~g~~~~~~~~~f~~F~~~~ 521 (669)
.||.-..+.+...++. +.|.-. +..|.-+...++. -+|....+.+|..|+++-
T Consensus 223 ~KDl~~~~~~~~~~~~-~~~~p~~~~~l~dp~nf~pAnPl-~TP~hI~PEWYFL~~Yai 279 (383)
T MTH00033 223 IKDILGFLILFGVFVI-IGIEPRIETLLQDPENFIQANPL-VTPVHIQPEWYFLFAYAI 279 (383)
T ss_pred HHHHHHHHHHHHHHHH-HHhCCCcccccCChhhcccCCCC-CCCCCCCCchHHHHHHHH
Confidence 3444444444433433 434321 3444444444443 355555667777776653
No 207
>PRK13453 F0F1 ATP synthase subunit B; Provisional
Probab=29.98 E-value=1.3e+02 Score=28.17 Aligned_cols=37 Identities=16% Similarity=0.041 Sum_probs=20.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 005931 583 GWVTDSLLATGAGTLGFLFLYLGVELIRHRLRKLEWR 619 (669)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (669)
.|..+++.++...++++++..+.|+.+...+.+++.+
T Consensus 17 ~~~t~~~~iInFliL~~lL~~~l~~pi~~~l~~R~~~ 53 (173)
T PRK13453 17 EWGTVIVTVLTFIVLLALLKKFAWGPLKDVMDKRERD 53 (173)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3655555554444455555556666666666555543
No 208
>COG1295 Rbn Ribonuclease BN family enzyme [Replication, recombination, and repair]
Probab=29.96 E-value=2.5e+02 Score=28.87 Aligned_cols=40 Identities=18% Similarity=0.188 Sum_probs=24.4
Q ss_pred HHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 005931 535 LVSIIPFERKKLMRLLVITHKVMWVSISFMATAYIAATRITV 576 (669)
Q Consensus 535 l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~ 576 (669)
+....|..++..++-+..| .++.++...+..++.+.|+..
T Consensus 207 ly~~lP~~~~~~~~~~~~G--a~~aai~~~i~~~~f~~Yv~~ 246 (303)
T COG1295 207 LYRFLPNVRVLKWRDVLPG--ALLAAILFELGKYLFGYYLSN 246 (303)
T ss_pred HHHHcCCccccchHHhhhh--HHHHHHHHHHHHHHHHHHHHH
Confidence 3345565434333335555 566677778888888888655
No 209
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=28.85 E-value=1.6e+02 Score=33.91 Aligned_cols=20 Identities=10% Similarity=0.290 Sum_probs=16.7
Q ss_pred hhhhHHHHHHHHHHHHHhcc
Q 005931 470 ARNTIILVAILIATVTYTGG 489 (669)
Q Consensus 470 ~~~~~~~va~liatvtf~a~ 489 (669)
..|+++.+++++.++.|+..
T Consensus 367 ~vNw~Lmv~~i~vvl~F~~S 386 (688)
T TIGR00794 367 FVNWLLMLGVIAVTAGFRDT 386 (688)
T ss_pred HHHHHHHHHHHheeEEecCh
Confidence 46899999999999999543
No 210
>COG3610 Uncharacterized conserved protein [Function unknown]
Probab=28.76 E-value=27 Score=32.02 Aligned_cols=21 Identities=24% Similarity=0.284 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhccccCCCcc
Q 005931 476 LVAILIATVTYTGGISPPGGV 496 (669)
Q Consensus 476 ~va~liatvtf~a~~~~Pgg~ 496 (669)
++.+.|+||+|+-.||+|.--
T Consensus 10 ~~~a~i~~v~Faivfnvp~~~ 30 (156)
T COG3610 10 MLFAFIATVGFAIVFNVPPRA 30 (156)
T ss_pred HHHHHHHHHHHHHHhcCCHHH
Confidence 568999999999999999753
No 211
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=28.31 E-value=1.9e+02 Score=32.24 Aligned_cols=18 Identities=6% Similarity=0.392 Sum_probs=15.8
Q ss_pred hhhhHHHHHHHHHHHHHh
Q 005931 470 ARNTIILVAILIATVTYT 487 (669)
Q Consensus 470 ~~~~~~~va~liatvtf~ 487 (669)
..|+++.+++++.++.|+
T Consensus 330 ~vNw~L~i~~i~vvl~F~ 347 (534)
T PF02705_consen 330 EVNWLLMIGVIAVVLGFR 347 (534)
T ss_pred HHHHHHHHHHHhhheEEC
Confidence 368999999999999994
No 212
>PF09971 DUF2206: Predicted membrane protein (DUF2206); InterPro: IPR018701 This family of predicted membrane proteins from archaea has no known function.
Probab=28.09 E-value=2e+02 Score=30.59 Aligned_cols=118 Identities=15% Similarity=0.150 Sum_probs=55.4
Q ss_pred HhccccCCCccCCCCCCCCccccCCC--ccceeehhhhhHHHHHHHHHHHHHHhcccchh-HHHHHHHHHHHHHHHHHHH
Q 005931 486 YTGGISPPGGVYQEGPLKGKSLVGRT--KAFKIFEISNNIALFTSLSIVIILVSIIPFER-KKLMRLLVITHKVMWVSIS 562 (669)
Q Consensus 486 f~a~~~~Pgg~~~~~~~~g~~~~~~~--~~f~~F~~~~~~a~~~S~~~~~~l~~~~~~~~-~~~~~~l~~~~~~~~~~~~ 562 (669)
|+.-||| ....|..++... ....++.+.+...++..++-++.++.....++ +.....+.++...+.+-++
T Consensus 91 ~~~~lnp-------~~s~G~~~~~~~~s~l~~i~k~i~l~~~~~i~IG~l~~~~~~~~~k~~~~~~Yl~fs~~~~iiLia 163 (367)
T PF09971_consen 91 FTEFLNP-------ETSQGAALLTKSSSLLHSISKYIHLFIQFFIIIGFLALILKRIYKKIKFNIEYLAFSLVSLIILIA 163 (367)
T ss_pred HHHhcCc-------chhhhhhHhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 5555655 222466665332 33455666666655554443333332211111 1113445555555555556
Q ss_pred HHHHHHHHhhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 005931 563 FMATAYIAATRITVPDDRGTGWVTDSLLATGAGTLGFLFLYLGVELIRHRLRKLEWRAKK 622 (669)
Q Consensus 563 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (669)
++.+-|+++..=+. .+..+.. ++...|...++..+...+.|..|++.+
T Consensus 164 ~i~lP~fa~~mn~~-----------RLy~itl-i~LAPf~iiG~~~~~~~i~k~~~~~~~ 211 (367)
T PF09971_consen 164 SIVLPFFASVMNPT-----------RLYQITL-IFLAPFFIIGGITLFKLINKLFRRIWK 211 (367)
T ss_pred HHhccchhhhcCHH-----------HHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 66666666432111 2222322 333444455555555666666666553
No 213
>PF01578 Cytochrom_C_asm: Cytochrome C assembly protein; InterPro: IPR002541 This entry consists of various proteins involved in cytochrome c assembly from mitochondria and bacteria; CycK from Rhizobium leguminosarum [], CcmC from Escherichia coli and Paracoccus denitrificans [, ] and orf240 from Triticum aestivum (Wheat) mitochondria []. The members of this family are probably integral membrane proteins with six predicted transmembrane helices that may comprise the membrane component of an ABC (ATP binding cassette) transporter complex. This transporter may be necessary for transport of some component needed for cytochrome c assembly. One member, R. leguminosarum CycK, contains a putative haem-binding motif []. Wheat orf240 also contains a putative haem-binding motif and is a proposed ABC transporter with c-type haem as its proposed substrate []. However it seems unlikely that all members of this family transport haem or c-type apocytochromes because P. denitrificans CcmC transports neither [].; GO: 0006461 protein complex assembly, 0008535 respiratory chain complex IV assembly, 0016020 membrane
Probab=27.96 E-value=5.4e+02 Score=24.64 Aligned_cols=22 Identities=23% Similarity=0.146 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 005931 588 SLLATGAGTLGFLFLYLGVELI 609 (669)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~ 609 (669)
.+..++.+++.+-++.-...++
T Consensus 77 ~~~~~~ya~~~ia~~~al~~l~ 98 (214)
T PF01578_consen 77 PLALLGYAAFAIAALAALLYLI 98 (214)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444333333
No 214
>PLN03077 Protein ECB2; Provisional
Probab=27.32 E-value=1.1e+03 Score=28.08 Aligned_cols=108 Identities=10% Similarity=0.019 Sum_probs=52.0
Q ss_pred HHHHhCCHHHHHHHHcCcchhhhcccCCC-CChHHHHHHHcCCHHHHHHHH----HhCCccccccCCCC-CcHHHHHHHc
Q 005931 11 EAIVRNDKQALINLVGCSNKRILLQRDAS-LNTALHLAARFGHVELVTEIT----KLCPELVAAENEKL-ETPLHEACCQ 84 (669)
Q Consensus 11 ~Ai~~gd~~~l~~ll~~~~~~~l~~~d~~-g~T~Lh~Aa~~g~~e~vk~Ll----~~~~~~~~~~n~~g-~TpLh~Aa~~ 84 (669)
-.++.|+++....+++ .- ..+|.. -++.+...++.|..+-...++ +.+.. .|..- .+.+..++..
T Consensus 231 ~y~k~g~~~~A~~lf~-~m----~~~d~~s~n~li~~~~~~g~~~eAl~lf~~M~~~g~~----Pd~~ty~~ll~a~~~~ 301 (857)
T PLN03077 231 MYVKCGDVVSARLVFD-RM----PRRDCISWNAMISGYFENGECLEGLELFFTMRELSVD----PDLMTITSVISACELL 301 (857)
T ss_pred HHhcCCCHHHHHHHHh-cC----CCCCcchhHHHHHHHHhCCCHHHHHHHHHHHHHcCCC----CChhHHHHHHHHHHhc
Confidence 3467789998888887 21 223333 344455556667654333333 33322 11111 2334445566
Q ss_pred CCHHHHHHHHh----hCCccccccCCCCCcHHHHHHHcCCHHHHHHHHcC
Q 005931 85 GNHEVSAFLME----ANPTVATKLNHESQSAFSLACRQGHLDVVKLLINQ 130 (669)
Q Consensus 85 g~~eivk~Ll~----~~~~~~~~~~~~g~tpL~~A~~~g~~eiv~~Ll~~ 130 (669)
|+.+..+.+.. .|.... .....+.+..-++.|..+-+..+++.
T Consensus 302 g~~~~a~~l~~~~~~~g~~~d---~~~~n~Li~~y~k~g~~~~A~~vf~~ 348 (857)
T PLN03077 302 GDERLGREMHGYVVKTGFAVD---VSVCNSLIQMYLSLGSWGEAEKVFSR 348 (857)
T ss_pred CChHHHHHHHHHHHHhCCccc---hHHHHHHHHHHHhcCCHHHHHHHHhh
Confidence 66655554443 222111 11123344455566666666555543
No 215
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=27.14 E-value=3e+02 Score=30.89 Aligned_cols=19 Identities=11% Similarity=0.149 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 005931 556 VMWVSISFMATAYIAATRI 574 (669)
Q Consensus 556 ~~~~~~~~~~~a~~~~~~~ 574 (669)
+..+++..+++.|+.+.|+
T Consensus 17 lI~~~iiliiv~f~~~~~l 35 (655)
T COG3887 17 LIAFSIILIIVSFSFNWWL 35 (655)
T ss_pred HHHHHHHHHHHHHHhhhHH
Confidence 5666777788888877654
No 216
>PRK07668 hypothetical protein; Validated
Probab=27.02 E-value=6.2e+02 Score=25.34 Aligned_cols=53 Identities=9% Similarity=0.073 Sum_probs=26.9
Q ss_pred hhhhhhhhHHHHHHHhHHHHhhhhHHH-HHHHHHh-hhhHHHHHHHHHHHHHhcc
Q 005931 437 YKDLSSRHMKELKQRYKSRQEKKNEVH-REALQNA-RNTIILVAILIATVTYTGG 489 (669)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~va~liatvtf~a~ 489 (669)
|---.++++++.++.+....++.-++- ++..++. ++...+-.++++.++|-+-
T Consensus 37 hLlEgQk~GkTA~~IfG~sPk~yA~EL~~~~~~~~~~~~~~l~~~ii~~l~~~~i 91 (254)
T PRK07668 37 HLIEGEKDGKTVEDIFGDSPKEYANELVKEMEVDRKENIKLILFIIIGILSFWII 91 (254)
T ss_pred HHHHHHHcCCcHHHHhCCCHHHHHHHHhcccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 333345677777777765444322211 1111122 3444466777777777554
No 217
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.79 E-value=2.7e+02 Score=32.79 Aligned_cols=214 Identities=17% Similarity=0.144 Sum_probs=96.8
Q ss_pred HHHHHHHcCCHHHHHHHHh-------hCCccccccCCCCCc----------HHHHHHHcCCHHHHHHHHcCCCccccccC
Q 005931 77 PLHEACCQGNHEVSAFLME-------ANPTVATKLNHESQS----------AFSLACRQGHLDVVKLLINQSWLMEFEED 139 (669)
Q Consensus 77 pLh~Aa~~g~~eivk~Ll~-------~~~~~~~~~~~~g~t----------pL~~A~~~g~~eiv~~Ll~~~~~~~~~~~ 139 (669)
-+-||..+|+..|++-|-. .|..+. ..|.++.. -+-.|..+.+.+-|-.|+++....
T Consensus 549 HikYal~~GD~GIikTLd~~iyitkv~gn~V~-cl~rd~~~~~~~IDptEy~FKlALi~k~ydeVl~lI~ns~Lv----- 622 (1202)
T KOG0292|consen 549 HIKYALENGDSGIIKTLDKPIYITKVKGNKVF-CLNRDGEIECLTIDPTEYRFKLALLNKKYDEVLHLIKNSNLV----- 622 (1202)
T ss_pred hhhhhhccCCcceEEecccceEEEEeeCCEEE-EEecCCCeEEEeechHHHHHHHHHHhhhhHHHHHHHHhcCcc-----
Confidence 4678888888888776643 122221 12333321 233455555555554455443222
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCccccccCCCCChHHHHHHH
Q 005931 140 SVESTPIYLAISRGHTDIAREILEVRPRFAGKTDKNGFSPLHYASSIGNVNMTKLLLNHNKDLALQYNKDGYTPLHLAAI 219 (669)
Q Consensus 140 ~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~eiv~~Ll~~g~~~~~~~~~~g~tpLh~Aa~ 219 (669)
|+.++-+-.+.|..+++..+++ +..|-+.+|...|++++.--......+...- . -.-..|..
T Consensus 623 --GqaiIaYLqKkgypeiAL~FVk-----------D~~tRF~LaLe~gnle~ale~akkldd~d~w-~----rLge~Al~ 684 (1202)
T KOG0292|consen 623 --GQAIIAYLQKKGYPEIALHFVK-----------DERTRFELALECGNLEVALEAAKKLDDKDVW-E----RLGEEALR 684 (1202)
T ss_pred --cHHHHHHHHhcCCcceeeeeec-----------CcchheeeehhcCCHHHHHHHHHhcCcHHHH-H----HHHHHHHH
Confidence 4555555555555555433322 2233444556666666554444443332210 1 11224455
Q ss_pred cCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHH
Q 005931 220 NGRVKILVAFLSSSPASFDRLTTYGETVFHLAVRFDKYNAFKFLAESFNTCLFHGQDQFGNTVLHLAVLRKNYQFVEYII 299 (669)
Q Consensus 220 ~g~~e~v~~LL~~~~~~i~~~d~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~in~~D~~G~TpLh~A~~~~~~~iv~~Ll 299 (669)
.|+..+++..++... .++. -+ .+=...|+.+=++-+... -..-++-.+-++.|...|..+--.-++
T Consensus 685 qgn~~IaEm~yQ~~k-nfek-----Ls--fLYliTgn~eKL~Km~~i------ae~r~D~~~~~qnalYl~dv~ervkIl 750 (1202)
T KOG0292|consen 685 QGNHQIAEMCYQRTK-NFEK-----LS--FLYLITGNLEKLSKMMKI------AEIRNDATGQFQNALYLGDVKERVKIL 750 (1202)
T ss_pred hcchHHHHHHHHHhh-hhhh-----ee--EEEEEeCCHHHHHHHHHH------HHhhhhhHHHHHHHHHhccHHHHHHHH
Confidence 666666655554321 1110 00 001112333333333221 111123344556666666544322233
Q ss_pred HhcCcccccccCCCCCHHHHHHHcCC--CchHHHHHHHHHH
Q 005931 300 KETVLDIYCRNHKNQTALDIIEQAGT--NDDATSLKKLFKT 338 (669)
Q Consensus 300 ~~~~~d~~~~n~~g~T~L~~a~~~~~--~~~~~~l~~~l~~ 338 (669)
-+-|+.||.++....+ .+..+.+.+.+..
T Consensus 751 ----------~n~g~~~laylta~~~G~~~~ae~l~ee~~~ 781 (1202)
T KOG0292|consen 751 ----------ENGGQLPLAYLTAAAHGLEDQAEKLGEELEK 781 (1202)
T ss_pred ----------HhcCcccHHHHHHhhcCcHHHHHHHHHhhcc
Confidence 3456888887665444 4666666555444
No 218
>KOG3832 consensus Predicted amino acid transporter [General function prediction only]
Probab=26.55 E-value=1.5e+02 Score=28.27 Aligned_cols=12 Identities=17% Similarity=0.299 Sum_probs=6.7
Q ss_pred HHHHHHHHhhhc
Q 005931 563 FMATAYIAATRI 574 (669)
Q Consensus 563 ~~~~a~~~~~~~ 574 (669)
+|--||..+-|+
T Consensus 32 alpkafatagwl 43 (319)
T KOG3832|consen 32 ALPKAFATAGWL 43 (319)
T ss_pred cchHhHhhccHH
Confidence 455566666544
No 219
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=26.37 E-value=3.6e+02 Score=27.24 Aligned_cols=19 Identities=16% Similarity=0.228 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHHHHHhccc
Q 005931 472 NTIILVAILIATVTYTGGI 490 (669)
Q Consensus 472 ~~~~~va~liatvtf~a~~ 490 (669)
.+|.|.++|...+..+||=
T Consensus 177 ~~CsvGSA~LT~IGLaAAK 195 (295)
T TIGR01478 177 GTCALSSALLGNIGIAAAK 195 (295)
T ss_pred EeeccHHHHHHHHHHHHHH
Confidence 6789999999999888874
No 220
>PF07051 OCIA: Ovarian carcinoma immunoreactive antigen (OCIA); InterPro: IPR009764 This family consists of several ovarian carcinoma immunoreactive antigen (OCIA) and related eukaryotic sequences. The function of this family is unknown [,].
Probab=26.36 E-value=2.3e+02 Score=24.22 Aligned_cols=25 Identities=8% Similarity=-0.108 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCC
Q 005931 557 MWVSISFMATAYIAATRITVPDDRG 581 (669)
Q Consensus 557 ~~~~~~~~~~a~~~~~~~~~~~~~~ 581 (669)
+=+++++|++++.+--.-+++.+.+
T Consensus 47 lPls~~s~~~t~~lv~~G~l~~~~r 71 (111)
T PF07051_consen 47 LPLSAGSMLVTQGLVKKGYLKSSPR 71 (111)
T ss_pred CcHHHHHHHHHHHHHHcCcccCCCc
Confidence 3456778888888776666654443
No 221
>PHA02849 putative transmembrane protein; Provisional
Probab=26.32 E-value=1.5e+02 Score=23.33 Aligned_cols=17 Identities=6% Similarity=0.071 Sum_probs=8.7
Q ss_pred HHHHHHHHHHhHHHHhh
Q 005931 606 VELIRHRLRKLEWRAKK 622 (669)
Q Consensus 606 ~~~~~~~~~~~~~~~~~ 622 (669)
+.++...+.+.+-|-.+
T Consensus 40 ws~v~d~~n~iK~kiin 56 (82)
T PHA02849 40 WSYVINFLNDMKIKLIN 56 (82)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 44455556665554333
No 222
>PF11137 DUF2909: Protein of unknown function (DUF2909); InterPro: IPR021313 This is a family of proteins conserved in Proteobacteria of unknown function.
Probab=26.13 E-value=3e+02 Score=20.98 Aligned_cols=56 Identities=11% Similarity=0.030 Sum_probs=24.2
Q ss_pred ehhhhhHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 005931 517 FEISNNIALFTSLSIVIILVSIIPFERKKLMRLLVITHKVMWVSISFMATAYIAAT 572 (669)
Q Consensus 517 F~~~~~~a~~~S~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~ 572 (669)
.++.=.++...|+.+-+.++-.-..+.+...+.|.+=..+-.+-+..+++|+.+|.
T Consensus 4 ~iv~lll~ii~sL~saL~~l~kd~~~~~rm~~~L~~RV~lS~~l~~lil~~~~~G~ 59 (63)
T PF11137_consen 4 LIVLLLLAIIASLFSALFFLVKDKGSSKRMVKALGRRVGLSALLFLLILIALYTGW 59 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33444455666766665555333222222223332211122233334556666664
No 223
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.13 E-value=1.1e+02 Score=31.74 Aligned_cols=58 Identities=17% Similarity=0.137 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005931 554 HKVMWVSISFMATAYIAATRITVPDDRGTGWVTDSLLATGAGTLGFLFLYLGVELIRHRL 613 (669)
Q Consensus 554 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (669)
+..+.+.+++.+++++.-+|-+-|+.-+...+++.+ -++|+++++|++.-+|+|...+
T Consensus 188 ~~~~vl~~~fvl~tlaivLFPLWP~~mR~gvyY~si--g~~gfl~~IlvLaIvRlILF~I 245 (372)
T KOG2927|consen 188 LMWQVLGVLFVLVTLAIVLFPLWPRRMRQGVYYLSI--GAGGFLAFILVLAIVRLILFGI 245 (372)
T ss_pred hhHHHHHHHHHHHHHHHHhcccCcHHHhcceeeeec--chhHHHHHHHHHHHHHHHHHHH
No 224
>COG4818 Predicted membrane protein [Function unknown]
Probab=26.09 E-value=3.6e+02 Score=22.31 Aligned_cols=29 Identities=31% Similarity=0.538 Sum_probs=12.3
Q ss_pred ccceeehhhhhHHHHHHHHHHHHHHhccc
Q 005931 512 KAFKIFEISNNIALFTSLSIVIILVSIIP 540 (669)
Q Consensus 512 ~~f~~F~~~~~~a~~~S~~~~~~l~~~~~ 540 (669)
..|.=|=--.++-.|+++.+++++++.+|
T Consensus 28 ~~FVrFHAmQS~ltF~~l~~l~ill~~iP 56 (105)
T COG4818 28 SKFVRFHAMQSFLTFLGLWLLIILLAFIP 56 (105)
T ss_pred CcceeehhHHHHHHHHHHHHHHHHHHHhh
Confidence 34444433333334444444444444444
No 225
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=26.06 E-value=1.6e+02 Score=25.07 Aligned_cols=12 Identities=25% Similarity=0.138 Sum_probs=7.8
Q ss_pred CCCCcccccccc
Q 005931 624 GKQSKVGVIRGR 635 (669)
Q Consensus 624 ~~~~~~~~~~~~ 635 (669)
-+++.|.+++|-
T Consensus 54 k~Gd~VvT~gGi 65 (106)
T PRK05585 54 AKGDEVVTNGGI 65 (106)
T ss_pred CCCCEEEECCCe
Confidence 567777666554
No 226
>PRK15204 undecaprenyl-phosphate galactose phosphotransferase; Provisional
Probab=25.98 E-value=3.6e+02 Score=29.83 Aligned_cols=14 Identities=0% Similarity=-0.071 Sum_probs=6.1
Q ss_pred HHHHHHHHhccccC
Q 005931 479 ILIATVTYTGGISP 492 (669)
Q Consensus 479 ~liatvtf~a~~~~ 492 (669)
++.--++|..++..
T Consensus 18 ~~~d~~~~~~~~~~ 31 (476)
T PRK15204 18 AISDLIFFNLALWF 31 (476)
T ss_pred HHHHHHHHHHHHHH
Confidence 33344555444433
No 227
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=25.96 E-value=2.8e+02 Score=20.60 Aligned_cols=24 Identities=21% Similarity=0.297 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHhhhccccCC
Q 005931 556 VMWVSISFMATAYIAATRITVPDD 579 (669)
Q Consensus 556 ~~~~~~~~~~~a~~~~~~~~~~~~ 579 (669)
+.|--+.+.++.|+.+.-.-.+.+
T Consensus 7 ~fWs~il~~vvgyI~ssL~~~~~n 30 (57)
T PF11151_consen 7 FFWSFILGEVVGYIGSSLTGVTYN 30 (57)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCC
Confidence 577788889999999997655443
No 228
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=25.93 E-value=1.9e+02 Score=28.26 Aligned_cols=16 Identities=19% Similarity=0.206 Sum_probs=6.9
Q ss_pred chhHHHHHHHHHHHHH
Q 005931 584 WVTDSLLATGAGTLGF 599 (669)
Q Consensus 584 ~~~~~~~~~~~~~~~~ 599 (669)
|++..++.+.+++++.
T Consensus 52 ~~~~~i~gi~~g~l~a 67 (224)
T PF13829_consen 52 WWYWLIIGILLGLLAA 67 (224)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444444444444433
No 229
>COG1300 SpoIIM Uncharacterized membrane protein [Function unknown]
Probab=25.76 E-value=6e+02 Score=24.50 Aligned_cols=23 Identities=35% Similarity=0.338 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHhHHHHhhhCC
Q 005931 603 YLGVELIRHRLRKLEWRAKKLGK 625 (669)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~ 625 (669)
.+++.+++.-..++.++++..++
T Consensus 149 ~~~~~li~~~~~~~~~~~~~~~~ 171 (207)
T COG1300 149 RLGYYLIRPGFGKRGEALKEAGR 171 (207)
T ss_pred HHHHHHHHhhccchhHHHHHHHH
Confidence 34555555555555555555443
No 230
>TIGR03025 EPS_sugtrans exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Certain closely related transferase enzymes such as Sinorhizobium ExoY and Lactococcus EpsD lack the N-terminal domain and are not found by this model.
Probab=25.64 E-value=3e+02 Score=30.03 Aligned_cols=16 Identities=38% Similarity=0.312 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHH
Q 005931 599 FLFLYLGVELIRHRLR 614 (669)
Q Consensus 599 ~~~~~~~~~~~~~~~~ 614 (669)
.+++.+.+|++..++.
T Consensus 100 ~~~ll~~~R~~~r~~~ 115 (445)
T TIGR03025 100 ALVLLLLWRLLLRRLL 115 (445)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444455555544443
No 231
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=25.63 E-value=84 Score=31.55 Aligned_cols=15 Identities=13% Similarity=-0.062 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHhhhc
Q 005931 560 SISFMATAYIAATRI 574 (669)
Q Consensus 560 ~~~~~~~a~~~~~~~ 574 (669)
.++..+++++.|+|.
T Consensus 245 DlagtAAtaA~aaF~ 259 (295)
T TIGR01478 245 DDAERAASAATSTFL 259 (295)
T ss_pred cccchHHHHHHHhhc
Confidence 344455566666543
No 232
>COG5522 Predicted integral membrane protein [Function unknown]
Probab=25.59 E-value=3.6e+02 Score=25.88 Aligned_cols=85 Identities=9% Similarity=0.190 Sum_probs=45.5
Q ss_pred HHHHhccccCCCccCCCCCCCCccccCCCccceeehhhhhHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHH
Q 005931 483 TVTYTGGISPPGGVYQEGPLKGKSLVGRTKAFKIFEISNNIALFTSLSIVIILVSIIPFERKKLMRLLVITHKVMWVSIS 562 (669)
Q Consensus 483 tvtf~a~~~~Pgg~~~~~~~~g~~~~~~~~~f~~F~~~~~~a~~~S~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 562 (669)
+.+|+|-++|-=|+. +.|. ..|..|+++--.-|.+.+.+++.+ -..|.++..+...+.+ ..+-.+.
T Consensus 105 g~sf~AlltPDl~~~------~~p~----l~~~lffitH~svfls~v~~~vhf-reRpgksgl~~svl~~---~~lg~~~ 170 (236)
T COG5522 105 GISFMALLTPDLQYL------QVPW----LEFLLFFITHISVFLSAVILIVHF-RERPGKSGLVMSVLVA---ISLGIMC 170 (236)
T ss_pred hHHHHHHHcCccccc------cchH----HHHHHHHHHHHHHHHHHHHHHHHh-ccCCCccchhHHHHHH---HHHHHHH
Confidence 457889999876653 3344 346777777666565554433333 2333334444333322 2333334
Q ss_pred HHHHHHHHhhhccccCCCC
Q 005931 563 FMATAYIAATRITVPDDRG 581 (669)
Q Consensus 563 ~~~~a~~~~~~~~~~~~~~ 581 (669)
.|.=.+..+-|+-+.+.+.
T Consensus 171 lfinrrLGtNYlylsk~P~ 189 (236)
T COG5522 171 LFINRRLGTNYLYLSKEPE 189 (236)
T ss_pred HHHHHHhcCceeEeecCCC
Confidence 4455677777777655443
No 233
>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding
Probab=25.39 E-value=3.4e+02 Score=24.83 Aligned_cols=7 Identities=29% Similarity=0.510 Sum_probs=3.1
Q ss_pred CccccCC
Q 005931 504 GKSLVGR 510 (669)
Q Consensus 504 g~~~~~~ 510 (669)
|..|-.+
T Consensus 83 ~~cIG~~ 89 (174)
T PF01529_consen 83 GNCIGRR 89 (174)
T ss_pred ccccccc
Confidence 4444433
No 234
>PF01566 Nramp: Natural resistance-associated macrophage protein; InterPro: IPR001046 The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functionally related proteins defined by a conserved hydrophobic core of ten transmembrane domains []. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others. It is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals []. The yeast proteins Smf1 and Smf2 may also transport divalent cations []. The natural resistance of mice to infection with intracellular parasites is controlled by the Bcg locus, which modulates the cytostatic/cytocidal activity of phagocytes. Nramp1, the gene responsible, is expressed exclusively in macrophages and poly-morphonuclear leukocytes, and encodes a polypeptide (natural resistance-associated macrophage protein) with features typical of integral membrane proteins. Other transporter proteins from a variety of sources also belong to this family.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane
Probab=25.21 E-value=5.6e+02 Score=26.91 Aligned_cols=17 Identities=12% Similarity=0.300 Sum_probs=9.3
Q ss_pred hhHHHHHHHHHHHHHhc
Q 005931 472 NTIILVAILIATVTYTG 488 (669)
Q Consensus 472 ~~~~~va~liatvtf~a 488 (669)
..+..+.++++++.+++
T Consensus 57 ~~~~~~~~~l~~~~~~~ 73 (358)
T PF01566_consen 57 AWFLWILIFLANIATQA 73 (358)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44555556666665544
No 235
>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function.
Probab=25.18 E-value=3.3e+02 Score=26.45 Aligned_cols=18 Identities=11% Similarity=0.121 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 005931 599 FLFLYLGVELIRHRLRKL 616 (669)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~ 616 (669)
.+|.+-++..+++|+|++
T Consensus 210 Y~~~ig~~i~l~~~~~~~ 227 (230)
T PF03904_consen 210 YIFAIGLFIYLYEWIRAK 227 (230)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344455556678888865
No 236
>PF05656 DUF805: Protein of unknown function (DUF805); InterPro: IPR008523 This entry is represented by Lactobacillus phage LBR48, DUF805. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.; GO: 0016021 integral to membrane
Probab=25.05 E-value=4.2e+02 Score=22.61 Aligned_cols=18 Identities=22% Similarity=0.213 Sum_probs=10.9
Q ss_pred CccceeehhhhhHHHHHH
Q 005931 511 TKAFKIFEISNNIALFTS 528 (669)
Q Consensus 511 ~~~f~~F~~~~~~a~~~S 528 (669)
+..|..+.+.+.+.+..-
T Consensus 11 R~~fw~~~l~~~~~~~~~ 28 (120)
T PF05656_consen 11 RKEFWWFFLINILIFILL 28 (120)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455777777666665443
No 237
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=24.87 E-value=6.8e+02 Score=26.61 Aligned_cols=24 Identities=13% Similarity=0.166 Sum_probs=16.7
Q ss_pred HHHhhhhHHHHHHHHHHHHHhccc
Q 005931 467 LQNARNTIILVAILIATVTYTGGI 490 (669)
Q Consensus 467 ~~~~~~~~~~va~liatvtf~a~~ 490 (669)
+-|.-..++-+++++.++++.-++
T Consensus 207 ~vNl~~~~l~l~tlv~sLsl~m~~ 230 (374)
T PF01528_consen 207 VVNLVLSLLGLETLVFSLSLMMAI 230 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556677778888888876654
No 238
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=24.35 E-value=4e+02 Score=27.67 Aligned_cols=9 Identities=22% Similarity=0.183 Sum_probs=3.8
Q ss_pred HHHHHHHHH
Q 005931 545 KLMRLLVIT 553 (669)
Q Consensus 545 ~~~~~l~~~ 553 (669)
++.....+|
T Consensus 230 Plr~~~~~g 238 (325)
T PRK10714 230 PLRLLSLLG 238 (325)
T ss_pred hHHHHHHHH
Confidence 334444444
No 239
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=24.34 E-value=25 Score=34.91 Aligned_cols=8 Identities=38% Similarity=0.737 Sum_probs=0.0
Q ss_pred cccchhHH
Q 005931 538 IIPFERKK 545 (669)
Q Consensus 538 ~~~~~~~~ 545 (669)
|+.++++.
T Consensus 69 ImlF~RrL 76 (381)
T PF05297_consen 69 IMLFKRRL 76 (381)
T ss_dssp --------
T ss_pred HHHHHHhh
Confidence 34445443
No 240
>PF09788 Tmemb_55A: Transmembrane protein 55A; InterPro: IPR019178 Members of this family catalyse the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate, in the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate.
Probab=24.23 E-value=2.3e+02 Score=28.02 Aligned_cols=29 Identities=14% Similarity=0.316 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 005931 543 RKKLMRLLVITHKVMWVSISFMATAYIAA 571 (669)
Q Consensus 543 ~~~~~~~l~~~~~~~~~~~~~~~~a~~~~ 571 (669)
++.....+++++.++++++.-|+++|..+
T Consensus 195 RkR~i~f~llgllfliiaigltvGT~~~A 223 (256)
T PF09788_consen 195 RKRAIIFFLLGLLFLIIAIGLTVGTWTYA 223 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 44444455666666666666666665544
No 241
>TIGR01477 RIFIN variant surface antigen, rifin family. This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.
Probab=24.05 E-value=1.2e+02 Score=31.58 Aligned_cols=27 Identities=22% Similarity=0.229 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 005931 595 GTLGFLFLYLGVELIRHRLRKLEWRAK 621 (669)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (669)
.+++++++.+-+.||.+..||.+.+|+
T Consensus 318 AIvvIVLIMvIIYLILRYRRKKKMkKK 344 (353)
T TIGR01477 318 AILIIVLIMVIIYLILRYRRKKKMKKK 344 (353)
T ss_pred HHHHHHHHHHHHHHHHHhhhcchhHHH
Confidence 345555555556666666666666554
No 242
>KOG3144 consensus Ethanolamine-P-transferase GPI11/PIG-F, involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=23.87 E-value=4.6e+02 Score=24.53 Aligned_cols=97 Identities=20% Similarity=0.295 Sum_probs=61.9
Q ss_pred CccccCCCccceeehhhhhHHHHHHHHHHHHHHhcccchhHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhhhccc
Q 005931 504 GKSLVGRTKAFKIFEISNNIALFTSLSIVIILVSIIPFERKKLMRLLVI-------THKVMWVSISFMATAYIAATRITV 576 (669)
Q Consensus 504 g~~~~~~~~~f~~F~~~~~~a~~~S~~~~~~l~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~a~~~~~~~~~ 576 (669)
|.|++. ..+.-|+++-++.++++.=.++++.+......+...+.+.- -..+..-++...++|.+++. +.
T Consensus 85 GAPli~--~~~~T~vlAl~lT~~t~~PtvfLl~~~~~~~~~~~~~f~s~~~~~si~e~~~k~~si~~~vGAW~ga~--vi 160 (196)
T KOG3144|consen 85 GAPLIK--DNYSTFVLALGLTFLTVFPTVFLLGSFGTWNLELWLRFLSYPGVTSIFEGLLKKNSIFIFVGAWAGAV--VI 160 (196)
T ss_pred CchHHH--HHHHHHHHHHHHHHHHhccHHHhhcccchhhHHHHHHHHhcCCCCcHhhhhHHHHHHHHHHHHHHhcc--cc
Confidence 556664 34667889999999999888888877554333333333211 11234456777778887776 44
Q ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 005931 577 PDDRGTGWVTDSLLATGAGTLGFLFLYL 604 (669)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (669)
|-+-+-.|-...+.++++++++..+.++
T Consensus 161 PLDWdR~WQ~wPIp~vvGa~lGa~~g~i 188 (196)
T KOG3144|consen 161 PLDWDRDWQAWPIPIVVGAFLGAAVGYI 188 (196)
T ss_pred cCCCCCchhhCCchHHHHHHHHHHHHHH
Confidence 5565566777777777777777666544
No 243
>COG4393 Predicted membrane protein [Function unknown]
Probab=23.73 E-value=7.9e+02 Score=25.48 Aligned_cols=50 Identities=18% Similarity=0.398 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 005931 525 LFTSLSIVIILVSIIPFERKKLMRLLVITHKVMWVSISFMATAYIAATRITVPDDRG 581 (669)
Q Consensus 525 ~~~S~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 581 (669)
|.-|+.-+-+|+.+.+ ..++..... ..+|+++.+-.++|..|.|. |.+..
T Consensus 8 ~Lqs~LP~alLlg~~w-~~~p~~~~~----~vvwl~~L~~~~g~~~~~y~--pKsq~ 57 (405)
T COG4393 8 FLQSVLPLALLLGITW-NKKPIFKSF----FVVWLGFLFGYFGFFIAAYF--PKSQN 57 (405)
T ss_pred HHHHHHHHHHHHcCCc-ccccchhHH----HHHHHHHHHHHHHHHHHHhc--ccccc
Confidence 3344444444555333 333333222 25888888888888877776 55544
No 244
>PF10688 Imp-YgjV: Bacterial inner membrane protein; InterPro: IPR019629 This entry represents inner membrane proteins, many are YgjV proteins. Their function is unknown.
Probab=23.47 E-value=3.7e+02 Score=24.77 Aligned_cols=21 Identities=10% Similarity=0.181 Sum_probs=14.5
Q ss_pred eehhhhhHHHHHHHHHHHHHH
Q 005931 516 IFEISNNIALFTSLSIVIILV 536 (669)
Q Consensus 516 ~F~~~~~~a~~~S~~~~~~l~ 536 (669)
+|.+++.+++++.+..+..+.
T Consensus 1 ~~~~aQ~~g~ia~~l~~~sf~ 21 (163)
T PF10688_consen 1 AFLLAQILGFIAFLLGILSFQ 21 (163)
T ss_pred CcHHHHHHHHHHHHHHHHHHH
Confidence 477888888887765555543
No 245
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=23.44 E-value=2.8e+02 Score=26.70 Aligned_cols=22 Identities=18% Similarity=0.019 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHhccccCCCc
Q 005931 474 IILVAILIATVTYTGGISPPGG 495 (669)
Q Consensus 474 ~~~va~liatvtf~a~~~~Pgg 495 (669)
-...-.+--+..|.+-|+.=-|
T Consensus 77 ~~~~~~ld~~L~~~~if~~~~g 98 (206)
T PF06570_consen 77 NPWLMALDNSLLFFGIFSLLFG 98 (206)
T ss_pred chHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666666655554433
No 246
>PTZ00046 rifin; Provisional
Probab=23.31 E-value=1.3e+02 Score=31.58 Aligned_cols=27 Identities=19% Similarity=0.217 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 005931 595 GTLGFLFLYLGVELIRHRLRKLEWRAK 621 (669)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (669)
.+++++++.+-+.||.+..||.+.+|+
T Consensus 323 AIvVIVLIMvIIYLILRYRRKKKMkKK 349 (358)
T PTZ00046 323 AIVVIVLIMVIIYLILRYRRKKKMKKK 349 (358)
T ss_pred HHHHHHHHHHHHHHHHHhhhcchhHHH
Confidence 345555555556666666666666554
No 247
>COG4956 Integral membrane protein (PIN domain superfamily) [General function prediction only]
Probab=23.19 E-value=8.3e+02 Score=25.15 Aligned_cols=153 Identities=12% Similarity=-0.049 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHHHHHHhcccc---CCCccCCCCCCCCccccCCCccceeehhhhhHHHHHHHHHHHHHHhcccchhHHH
Q 005931 470 ARNTIILVAILIATVTYTGGIS---PPGGVYQEGPLKGKSLVGRTKAFKIFEISNNIALFTSLSIVIILVSIIPFERKKL 546 (669)
Q Consensus 470 ~~~~~~~va~liatvtf~a~~~---~Pgg~~~~~~~~g~~~~~~~~~f~~F~~~~~~a~~~S~~~~~~l~~~~~~~~~~~ 546 (669)
|.++...+.-++...+-.-.+. .|...+|+ ..+.+..+-.+-+.+-...+.+-...-.++-+.-..+....
T Consensus 1 ml~~ii~l~~~i~g~~lG~~~~p~ll~~~~~~~------~~~~~n~~v~~ligai~~~li~~~~~~~~~~~~~~le~~i~ 74 (356)
T COG4956 1 MLKWIIILLFIIIGAVLGFAVIPELLADLGIQD------TAFLNNEYVDALIGAIIFFLISFWFGKYVLNWLKRLEEQIR 74 (356)
T ss_pred CHHHHHHHHHHHHHhhhhHhhHHHHHhhcCccc------chhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcchhHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHhHH
Q 005931 547 MRLLVITHKVMWVSISFMATAYIAATRITVPDDRGTGWVTDSLLATGAGTLGFLFLY--------LGVELIRHRLRKLEW 618 (669)
Q Consensus 547 ~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 618 (669)
+.-+.--+.-.+--+.++++|++.++-+..-+-+-.+|...++..+..+++++-+.. +.++..++-..| ..
T Consensus 75 k~~~~~ilf~tiGLiiGLlia~l~~~pL~~~~ip~~~~ii~vi~t~il~y~G~~~~~k~~de~~~l~~~~~~~~m~~-~~ 153 (356)
T COG4956 75 KLPVTTILFGTIGLIIGLLIAVLLSSPLFLLPIPFISTIIPVILTIILAYFGFQLADKKRDEFLRLLNPNRREAMKK-EE 153 (356)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHhhHHhhCCccHHHhHHHHHHHHHHHHHhhHHhhhhhHHHHHhcchhhHHHhhh-hh
Q ss_pred HHhhhCCCCcc
Q 005931 619 RAKKLGKQSKV 629 (669)
Q Consensus 619 ~~~~~~~~~~~ 629 (669)
.-+.++++++|
T Consensus 154 ~~~~k~~~~KI 164 (356)
T COG4956 154 EGEVKPKKPKI 164 (356)
T ss_pred hhcccCCCCeE
No 248
>PF07344 Amastin: Amastin surface glycoprotein; InterPro: IPR009944 This family contains the eukaryotic surface glycoprotein amastin (approximately 180 residues long).In Trypanosoma cruzi, amastin is particularly abundant during the amastigote stage.
Probab=23.16 E-value=2.8e+02 Score=25.30 Aligned_cols=60 Identities=17% Similarity=0.149 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC-CCCcchhHHHHHHHHHHHHHHHHHHHH
Q 005931 545 KLMRLLVITHKVMWVSISFMATAYIAATRITVPDD-RGTGWVTDSLLATGAGTLGFLFLYLGV 606 (669)
Q Consensus 545 ~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (669)
.....+..+-.+.++|+....+||+.|..+.. . +..+|+..++.+++.....+++..+..
T Consensus 57 ~~~~~f~aa~afaIisi~~~~~a~v~g~~~l~--~~~~~r~v~l~L~~~~~~~~~v~wa~~v~ 117 (155)
T PF07344_consen 57 QRRSRFRAAQAFAIISIFVYGAAFVLGVLLLC--CCSCLRWVCLVLNIVGIVTLLVVWALMVV 117 (155)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHHHHHH
No 249
>PF06687 SUR7: SUR7/PalI family; InterPro: IPR009571 This family consists of several fungal-specific SUR7 proteins. Its activity regulates expression of RVS161, a homologue of human endophilin, suggesting a function for both in endocytosis [, ]. The protein carries four transmembrane domains and is thus likely to act as an anchoring protein for the eisosome to the plasma membrane. Eisosomes are the immobile protein complexes, that include the proteins Pil1 and Lsp1, which co-localise with sites of protein and lipid endocytosis at the plasma membrane. SUR7 protein may play a role in sporulation []. Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This family also includes PalI which is part of a pH signal transduction cascade. Based on the similarity of PalI to the yeast Rim9 meiotic signal transduction component it has been suggested that PalI might be a membrane sensor for ambient pH [].
Probab=23.15 E-value=6.1e+02 Score=24.10 Aligned_cols=18 Identities=22% Similarity=0.168 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 005931 553 THKVMWVSISFMATAYIA 570 (669)
Q Consensus 553 ~~~~~~~~~~~~~~a~~~ 570 (669)
+..+..+++.+..++++.
T Consensus 117 ~~~l~~ia~~~t~l~~~~ 134 (212)
T PF06687_consen 117 MFILYPIAIVFTFLALIL 134 (212)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333455555555555555
No 250
>KOG3059 consensus N-acetylglucosaminyltransferase complex, subunit PIG-C/GPI2, required for phosphatidylinositol biosynthesis [Lipid transport and metabolism]
Probab=23.11 E-value=8e+02 Score=24.88 Aligned_cols=24 Identities=17% Similarity=0.187 Sum_probs=13.6
Q ss_pred hHHHHHHHHHHHHHHhcccchhHH
Q 005931 522 NIALFTSLSIVIILVSIIPFERKK 545 (669)
Q Consensus 522 ~~a~~~S~~~~~~l~~~~~~~~~~ 545 (669)
.++.-+++.+.+++.|.++.+...
T Consensus 174 ~lS~na~v~~sv~LaSRl~~~~~v 197 (292)
T KOG3059|consen 174 PLSLNAAVSASVLLASRLEKSIHV 197 (292)
T ss_pred cchHHHHHHHHHHHHHhcCCchHH
Confidence 345555555556666666655443
No 251
>PF04304 DUF454: Protein of unknown function (DUF454); InterPro: IPR007401 This is a predicted membrane protein.
Probab=23.00 E-value=1.2e+02 Score=23.32 Aligned_cols=19 Identities=16% Similarity=0.085 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHhhhcccc
Q 005931 559 VSISFMATAYIAATRITVP 577 (669)
Q Consensus 559 ~~~~~~~~a~~~~~~~~~~ 577 (669)
.++++|.+.+..+.+.+.|
T Consensus 31 ~a~~~m~~~~~~s~~~~~~ 49 (71)
T PF04304_consen 31 RALLMMWLSMGISAFFFVP 49 (71)
T ss_pred HHHHHHHHHHHHHHHHHcc
Confidence 3445555555555444444
No 252
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=22.90 E-value=3.6e+02 Score=33.46 Aligned_cols=12 Identities=25% Similarity=0.387 Sum_probs=9.8
Q ss_pred ccccCCCccCCC
Q 005931 488 GGISPPGGVYQE 499 (669)
Q Consensus 488 a~~~~Pgg~~~~ 499 (669)
+.+++|+|+..|
T Consensus 61 ~l~~~~~G~l~D 72 (1146)
T PRK08633 61 LLLSSPAGFLAD 72 (1146)
T ss_pred HHHhhhHhhhcc
Confidence 456899999888
No 253
>PF13903 Claudin_2: PMP-22/EMP/MP20/Claudin tight junction
Probab=22.86 E-value=5.6e+02 Score=23.04 Aligned_cols=24 Identities=8% Similarity=0.063 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHhhhccccC
Q 005931 555 KVMWVSISFMATAYIAATRITVPD 578 (669)
Q Consensus 555 ~~~~~~~~~~~~a~~~~~~~~~~~ 578 (669)
.++.++++.+++|+..+++.....
T Consensus 73 ~~~~l~~~~~~~a~~~~~~~~~~~ 96 (172)
T PF13903_consen 73 AFLILGLLLLLFAFVFALIGFCKR 96 (172)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Confidence 367778888888888777655543
No 254
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=22.80 E-value=3.7e+02 Score=23.72 Aligned_cols=13 Identities=38% Similarity=0.352 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHH
Q 005931 600 LFLYLGVELIRHR 612 (669)
Q Consensus 600 ~~~~~~~~~~~~~ 612 (669)
+++.+++.+++..
T Consensus 105 ~~l~~~~~~~~~~ 117 (135)
T PF04246_consen 105 LGLALGFLILRLF 117 (135)
T ss_pred HHHHHHHHHHHHH
Confidence 3344444444333
No 255
>PRK04214 rbn ribonuclease BN/unknown domain fusion protein; Reviewed
Probab=22.78 E-value=4.8e+02 Score=28.17 Aligned_cols=53 Identities=8% Similarity=0.016 Sum_probs=29.7
Q ss_pred hhHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 005931 521 NNIALFTSLSIVIILVSIIPFERKKLMRLLVITHKVMWVSISFMATAYIAATRITV 576 (669)
Q Consensus 521 ~~~a~~~S~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~ 576 (669)
..+.+....++..++....|.++ ...+....| .++.+++..++.+..+.|..-
T Consensus 183 ~~~~~~~~~~~f~~lY~~~Pn~~-v~~r~al~G--ai~a~vl~~~~~~~f~~yv~~ 235 (412)
T PRK04214 183 RLAPLAFETVCLTLLYRVVPNHF-VPLRHALPG--ALLTAVLLELVKWGFGFYLGN 235 (412)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCc-cchHHhHHH--HHHHHHHHHHHHHHHHHHHHh
Confidence 44555555444444445566544 333444444 466677777777777777643
No 256
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=22.76 E-value=2.9e+02 Score=28.30 Aligned_cols=14 Identities=14% Similarity=0.131 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHH
Q 005931 602 LYLGVELIRHRLRK 615 (669)
Q Consensus 602 ~~~~~~~~~~~~~~ 615 (669)
++.+-++....+.+
T Consensus 95 ivIs~pl~l~iF~~ 108 (301)
T PF14362_consen 95 IVISEPLELKIFEK 108 (301)
T ss_pred HHHHHHHHHHHHHH
Confidence 44445555555544
No 257
>PF03189 Otopetrin: Otopetrin; InterPro: IPR004878 The otopetrins are a group of proteins that are restricted to the metazoa. The structure of otopetrin-1 (Q80VM9 from SWISSPROT) shows it to have 12 transmembrane domains, with three conserved sub-domains (OD-1 to OD-III) []. Otopetrins modulate calcium homeostasis and influx of calcium in response to extracellular ATP. The otopetrins are required for normal formation of otoconia/otoliths in the inner ear. Otoconia are minute biomineral particles embedded in a gelatinous membrane that overlies the sensory epithelium in the inner ear. Gravity and acceleration cause the octoconia to deflect the stereocilia of sensory hair cells. Otoconia are required for normal processing of information regarding spatial orientation and acceleration.
Probab=22.74 E-value=2.8e+02 Score=30.35 Aligned_cols=50 Identities=24% Similarity=0.233 Sum_probs=30.1
Q ss_pred hhhHHHHHHHHHHHHHhccccCCCccCCCCCCCCccccCCCccceeehhhhhHHHHHHHHHHHH
Q 005931 471 RNTIILVAILIATVTYTGGISPPGGVYQEGPLKGKSLVGRTKAFKIFEISNNIALFTSLSIVII 534 (669)
Q Consensus 471 ~~~~~~va~liatvtf~a~~~~Pgg~~~~~~~~g~~~~~~~~~f~~F~~~~~~a~~~S~~~~~~ 534 (669)
.+-+++|+++++=+-|..-.+-|. + ...+...|.+++.+-+..|++++++
T Consensus 244 ~Gil~lv~tii~lilf~v~~~~~~-------------~-~~~A~~~~~i~~~~l~~l~~~a~i~ 293 (441)
T PF03189_consen 244 LGILVLVATIIVLILFFVLINDPE-------------Y-SELAILLVYIFELVLYSLSILAVII 293 (441)
T ss_pred HHHHHHHHHHHHhehhhheecCCc-------------h-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356777778877777765544221 0 1234556777777766666666554
No 258
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=22.74 E-value=6e+02 Score=24.48 Aligned_cols=11 Identities=27% Similarity=0.320 Sum_probs=5.4
Q ss_pred HHHHHhccccC
Q 005931 482 ATVTYTGGISP 492 (669)
Q Consensus 482 atvtf~a~~~~ 492 (669)
..++.--++.+
T Consensus 115 ~m~~ee~g~~~ 125 (213)
T PF01988_consen 115 FMMREELGLSP 125 (213)
T ss_pred HHHhhhccCCc
Confidence 34455555555
No 259
>PRK10633 hypothetical protein; Provisional
Probab=22.71 E-value=4.1e+02 Score=21.35 Aligned_cols=22 Identities=23% Similarity=0.442 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhH
Q 005931 596 TLGFLFLYLGVELIRHRLRKLE 617 (669)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~ 617 (669)
+..++|+.+++.+++..+|..+
T Consensus 52 ~~p~lfi~l~~~~Vk~vFkDi~ 73 (80)
T PRK10633 52 LLPLLFILLCWLMVKFIFRDIP 73 (80)
T ss_pred HHHHHHHHHHHHHHHHHhcCCC
Confidence 3345666666766666666544
No 260
>PF15345 TMEM51: Transmembrane protein 51
Probab=22.68 E-value=1.2e+02 Score=29.62 Aligned_cols=12 Identities=33% Similarity=0.506 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHH
Q 005931 598 GFLFLYLGVELI 609 (669)
Q Consensus 598 ~~~~~~~~~~~~ 609 (669)
++++++|.++|-
T Consensus 68 Gv~LLLLSICL~ 79 (233)
T PF15345_consen 68 GVALLLLSICLS 79 (233)
T ss_pred HHHHHHHHHHHH
Confidence 355555666553
No 261
>CHL00045 ccsA cytochrome c biogenesis protein
Probab=22.63 E-value=6.9e+02 Score=25.91 Aligned_cols=18 Identities=6% Similarity=0.143 Sum_probs=9.0
Q ss_pred HhhhhHHHHHHHHHHHHH
Q 005931 469 NARNTIILVAILIATVTY 486 (669)
Q Consensus 469 ~~~~~~~~va~liatvtf 486 (669)
+....+++++.++-|+..
T Consensus 39 ~~~~~~~~~~~~~ht~~l 56 (319)
T CHL00045 39 DSSEKGMIITFFCITGLL 56 (319)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344445555555555544
No 262
>MTH00119 CYTB cytochrome b; Provisional
Probab=22.61 E-value=9.6e+02 Score=25.61 Aligned_cols=53 Identities=9% Similarity=0.256 Sum_probs=24.0
Q ss_pred HHHhhhhHHHHHHHHHHHHHhcc-ccCCCccCCCCCCCCccccCCCccceeehhh
Q 005931 467 LQNARNTIILVAILIATVTYTGG-ISPPGGVYQEGPLKGKSLVGRTKAFKIFEIS 520 (669)
Q Consensus 467 ~~~~~~~~~~va~liatvtf~a~-~~~Pgg~~~~~~~~g~~~~~~~~~f~~F~~~ 520 (669)
.|+.-..+++++.++.-+.|.-. +..|-.+...|+. -+|....+.+|..|+++
T Consensus 227 ~kDl~~~~~~~~vl~~~~~~~P~~l~~p~n~~panp~-~TP~~i~PEWYFL~~y~ 280 (380)
T MTH00119 227 YKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPL-VTPPHIKPEWYFLFAYA 280 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCccccccCCCC-CCCCCCCcchHHHHHHH
Confidence 34445555555544444444321 2333333333332 24555556666665443
No 263
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=22.53 E-value=4.5e+02 Score=22.03 Aligned_cols=13 Identities=15% Similarity=0.220 Sum_probs=7.0
Q ss_pred CCCcchhHHHHHH
Q 005931 580 RGTGWVTDSLLAT 592 (669)
Q Consensus 580 ~~~~~~~~~~~~~ 592 (669)
.+.+|.+.+-+++
T Consensus 13 ~g~sW~~LVGVv~ 25 (102)
T PF15176_consen 13 GGRSWPFLVGVVV 25 (102)
T ss_pred CCcccHhHHHHHH
Confidence 4566766544433
No 264
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=22.48 E-value=7e+02 Score=23.97 Aligned_cols=20 Identities=20% Similarity=0.532 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHhH
Q 005931 598 GFLFLYLGVELIRHRLRKLE 617 (669)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~ 617 (669)
.+++++++...+.+.+++.+
T Consensus 68 ~~iLi~iG~~mi~~~~~~~~ 87 (206)
T TIGR02840 68 AFILIAIGIWIIYNAFRPKK 87 (206)
T ss_pred HHHHHHHHHHHHHHHHhhhc
Confidence 35666677788777776443
No 265
>PF09610 Myco_arth_vir_N: Mycoplasma virulence signal region (Myco_arth_vir_N); InterPro: IPR011732 This entry represents the N-terminal region of a family of large, virulence-associated proteins in Mycoplasma arthritidis and smaller proteins in Mycoplasma capricolum. It includes a probable signal sequence or signal anchor, which, in most instances, has four consecutive Lys residues before the hydrophobic stretch.
Probab=22.42 E-value=54 Score=21.10 Aligned_cols=20 Identities=25% Similarity=0.223 Sum_probs=15.0
Q ss_pred hhhhHHHHHHHHHHHHHhcc
Q 005931 470 ARNTIILVAILIATVTYTGG 489 (669)
Q Consensus 470 ~~~~~~~va~liatvtf~a~ 489 (669)
..=.+.++|+|+|+++|.+-
T Consensus 10 ~Il~la~~a~l~as~s~g~v 29 (33)
T PF09610_consen 10 KILTLALTASLLASGSFGSV 29 (33)
T ss_pred hhhhHHHHHHHHHceeeeeE
Confidence 34467788999999998653
No 266
>KOG3788 consensus Predicted divalent cation transporter [Inorganic ion transport and metabolism]
Probab=22.33 E-value=3.8e+02 Score=28.56 Aligned_cols=53 Identities=28% Similarity=0.345 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHhccccCCCccCCCCCCCCccccCCCccceeehhhhhHHHHHHHHHHHHHHhcc
Q 005931 475 ILVAILIATVTYTGGISPPGGVYQEGPLKGKSLVGRTKAFKIFEISNNIALFTSLSIVIILVSII 539 (669)
Q Consensus 475 ~~va~liatvtf~a~~~~Pgg~~~~~~~~g~~~~~~~~~f~~F~~~~~~a~~~S~~~~~~l~~~~ 539 (669)
.||+-|++-.+-..|+.|-|+++-+. + ...=.-+-.+|+.+|++-.++++.++
T Consensus 119 tvvgfla~i~a~~lg~~p~~~~~~~~---~---------llL~~SSv~ta~las~vl~~lmv~vI 171 (441)
T KOG3788|consen 119 TVVGFLAAIAAIALGIIPEGDFDIEH---S---------LLLCASSVATATLASLVLGILMVVVI 171 (441)
T ss_pred HHHHHHHHHHHHHhccCccCCCcHHH---H---------HHHHHHHHHHHHHHHHHHHHHHhhee
Confidence 45555666666667777767664431 1 11112234456677766666655443
No 267
>KOG2568 consensus Predicted membrane protein [Function unknown]
Probab=21.97 E-value=4.6e+02 Score=29.09 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhh
Q 005931 589 LLATGAGTLGFLFLYLGVELIRHRLRKLEWRAKKL 623 (669)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (669)
+.++..++.-..|++.-+.-+.+.+|+.+.||.-.
T Consensus 342 f~~ip~ai~d~~f~~wIF~SL~~Tlk~Lr~rRn~v 376 (518)
T KOG2568|consen 342 FAALPLAILDAAFIYWIFISLAKTLKKLRLRRNIV 376 (518)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445556666677777778888888766543
No 268
>TIGR03144 cytochr_II_ccsB cytochrome c-type biogenesis protein CcsB. Members of this protein family represent one of two essential proteins of system II for c-type cytochrome biogenesis. Additional proteins tend to be part of the system but can be replaced by chemical reductants such as dithiothreitol. This protein is designated CcsB in Bordetella pertussis and some other bacteria, resC in Bacillus (where there is additional N-terminal sequence), and CcsA in chloroplast. We use the CcsB designation here. Member sequences show regions of strong sequence conservation and variable-length, poorly conserved regions in between; sparsely filled columns were removed from the seed alignment prior to model construction.
Probab=21.78 E-value=7e+02 Score=24.62 Aligned_cols=13 Identities=15% Similarity=-0.087 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHHH
Q 005931 590 LATGAGTLGFLFL 602 (669)
Q Consensus 590 ~~~~~~~~~~~~~ 602 (669)
..++.+++.+-++
T Consensus 100 a~l~ya~~~la~~ 112 (243)
T TIGR03144 100 MILSYAALLVGSL 112 (243)
T ss_pred HHHHHHHHHHHHH
Confidence 3344333333333
No 269
>PF06454 DUF1084: Protein of unknown function (DUF1084); InterPro: IPR009457 This entry consists of several hypothetical plant specific proteins of unknown function.
Probab=21.74 E-value=1.7e+02 Score=29.74 Aligned_cols=19 Identities=26% Similarity=0.291 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 005931 594 AGTLGFLFLYLGVELIRHR 612 (669)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~ 612 (669)
..+.++.|++.+.++....
T Consensus 173 sli~a~~Fl~YG~~L~~~L 191 (281)
T PF06454_consen 173 SLIAALGFLYYGGKLFFKL 191 (281)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344556666777765554
No 270
>PF01708 Gemini_mov: Geminivirus putative movement protein ; InterPro: IPR002621 This family consists of putative movement proteins from Maize streak virus and Wheat dwarf virus [].; GO: 0046740 spread of virus in host, cell to cell, 0016021 integral to membrane
Probab=21.54 E-value=61 Score=26.32 Aligned_cols=57 Identities=18% Similarity=0.243 Sum_probs=25.3
Q ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHhhhCC-CCcccccccccc
Q 005931 577 PDDRGTGWVTDSLLATGAGTLGFLFLYLGVELI-RHRLRKLEWRAKKLGK-QSKVGVIRGRIQ 637 (669)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 637 (669)
|.+++..|.-++.+++++ ++.+..+||.|.++ +.-+-- +|-| +|| .+-++++....+
T Consensus 27 p~ss~~~ws~vv~v~i~~-lvaVg~~YL~y~~fLkDlIlv--~KAk-rqrsTeEigFG~tp~r 85 (91)
T PF01708_consen 27 PSSSGLPWSRVVEVAIFT-LVAVGCLYLAYTWFLKDLILV--LKAK-RQRSTEEIGFGNTPAR 85 (91)
T ss_pred CCCCCCcceeEeeeeehH-HHHHHHHHHHHHHHHHHHhhe--eeec-cCCceeeeeeCCCCCC
Confidence 444556666555555442 33344444444443 333222 2222 244 555566554444
No 271
>PRK05415 hypothetical protein; Provisional
Probab=21.53 E-value=7.4e+02 Score=25.98 Aligned_cols=9 Identities=0% Similarity=0.050 Sum_probs=4.3
Q ss_pred HHHHHhhhc
Q 005931 566 TAYIAATRI 574 (669)
Q Consensus 566 ~a~~~~~~~ 574 (669)
+-|+...|.
T Consensus 86 ~~~i~~~~~ 94 (341)
T PRK05415 86 VQWLRDAFQ 94 (341)
T ss_pred HHHHHHHHH
Confidence 445555543
No 272
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=21.34 E-value=7.3e+02 Score=23.75 Aligned_cols=16 Identities=19% Similarity=0.320 Sum_probs=8.9
Q ss_pred HHHHhhhhHHHHHHHH
Q 005931 466 ALQNARNTIILVAILI 481 (669)
Q Consensus 466 ~~~~~~~~~~~va~li 481 (669)
|+.-..+++++.+.+.
T Consensus 79 ~~~~ld~~L~~~~if~ 94 (206)
T PF06570_consen 79 WLMALDNSLLFFGIFS 94 (206)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555566666655433
No 273
>MTH00034 CYTB cytochrome b; Validated
Probab=21.31 E-value=1e+03 Score=25.42 Aligned_cols=54 Identities=13% Similarity=0.102 Sum_probs=28.2
Q ss_pred HHhhhhHHHHHHHHHHHHHhcc-ccCCCccCCCCCCCCccccCCCccceeehhhhh
Q 005931 468 QNARNTIILVAILIATVTYTGG-ISPPGGVYQEGPLKGKSLVGRTKAFKIFEISNN 522 (669)
Q Consensus 468 ~~~~~~~~~va~liatvtf~a~-~~~Pgg~~~~~~~~g~~~~~~~~~f~~F~~~~~ 522 (669)
||.-..++++++++.-+.|... +..|.-+...++ .-+|....+.+|..|+++-.
T Consensus 227 kD~~~~~~~l~~~~~~~~~~P~~l~~~~n~~pAnp-~~TP~~I~PEWYFL~~YaiL 281 (379)
T MTH00034 227 KDLVGFLILFAALSSLALLFPTALNDPENFIPANP-LVTPPHIQPEWYFLFAYAIL 281 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHhhcCchhhhhcCC-cCCCccCCCcchhHHHHHHH
Confidence 3444455555555555555433 344444444344 24566566777777766543
No 274
>PF09835 DUF2062: Uncharacterized protein conserved in bacteria (DUF2062); InterPro: IPR018639 This domain, found in various prokaryotic proteins, has no known function. It is found at the C-terminal of family 2 glycosyltransferase proteins, in addition to proteins of unknown function.
Probab=21.20 E-value=1.8e+02 Score=26.32 Aligned_cols=31 Identities=16% Similarity=0.169 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 005931 591 ATGAGTLGFLFLYLGVELIRHRLRKLEWRAK 621 (669)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (669)
.+..+++..+..|+....+.+..|++++|||
T Consensus 124 ~~i~~~v~~~i~Y~l~~~~~~~~r~~r~~~r 154 (154)
T PF09835_consen 124 SLILGIVLGIISYFLVYFLVRKYRKRRRKRR 154 (154)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3334455556666556666666688887775
No 275
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=20.42 E-value=8.3e+02 Score=26.37 Aligned_cols=12 Identities=33% Similarity=0.573 Sum_probs=4.7
Q ss_pred HHHHHHHHHHHH
Q 005931 525 LFTSLSIVIILV 536 (669)
Q Consensus 525 ~~~S~~~~~~l~ 536 (669)
++.+.+++-+++
T Consensus 18 ~~~~~i~~p~iv 29 (415)
T TIGR00801 18 MFGGTVLVPLLV 29 (415)
T ss_pred HHHHHHHHHHHH
Confidence 334443333333
No 276
>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.
Probab=20.38 E-value=5.8e+02 Score=22.26 Aligned_cols=25 Identities=24% Similarity=0.444 Sum_probs=11.7
Q ss_pred HhHHHHhhhC--CCCcccccccccccc
Q 005931 615 KLEWRAKKLG--KQSKVGVIRGRIQSH 639 (669)
Q Consensus 615 ~~~~~~~~~~--~~~~~~~~~~~~~~~ 639 (669)
+.+|+..+.| .+.+...-+|.|+.+
T Consensus 88 ~l~~~l~~~g~l~~~~lI~~sg~W~~r 114 (121)
T PF11990_consen 88 RLQWRLARRGPLGGSRLITRSGAWSLR 114 (121)
T ss_pred HHHHHHHHhcccCCCCcEEeeCcEecc
Confidence 3445555554 234434445555544
No 277
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=20.35 E-value=2.1e+02 Score=22.48 Aligned_cols=9 Identities=22% Similarity=0.324 Sum_probs=3.4
Q ss_pred HHHHHHHHH
Q 005931 604 LGVELIRHR 612 (669)
Q Consensus 604 ~~~~~~~~~ 612 (669)
+.+.++...
T Consensus 24 ~~i~l~~~~ 32 (79)
T PF04277_consen 24 LVISLMSKL 32 (79)
T ss_pred HHHHHHHHH
Confidence 333333333
No 278
>PF03839 Sec62: Translocation protein Sec62; InterPro: IPR004728 Members of the NSCC2 family have been sequenced from various yeast, fungal and animals species including Saccharomyces cerevisiae, Drosophila melanogaster and Homo sapiens. These proteins are the Sec62 proteins, believed to be associated with the Sec61 and Sec63 constituents of the general protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins have been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions.; GO: 0008565 protein transporter activity, 0015031 protein transport, 0016021 integral to membrane
Probab=20.13 E-value=2.8e+02 Score=27.09 Aligned_cols=7 Identities=0% Similarity=0.301 Sum_probs=2.9
Q ss_pred cceeehh
Q 005931 513 AFKIFEI 519 (669)
Q Consensus 513 ~f~~F~~ 519 (669)
.|.+.++
T Consensus 98 ~~YvW~y 104 (224)
T PF03839_consen 98 EYYVWIY 104 (224)
T ss_pred eEEEEEe
Confidence 3444433
No 279
>COG1971 Predicted membrane protein [Function unknown]
Probab=20.10 E-value=7.6e+02 Score=23.46 Aligned_cols=86 Identities=13% Similarity=0.082 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHh-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcchhHHHHHHHHHHHHHHH
Q 005931 523 IALFTSLSIVIILVS-IIPFERKKLMRLLVITHKVMWVSISFMATAYIAATRITVPDDRGTGWVTDSLLATGAGTLGFLF 601 (669)
Q Consensus 523 ~a~~~S~~~~~~l~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (669)
+|+..|+-+..+=++ +....+...+..+.++.++=.+-..+|.+....|.+.-- ++....-+ +-..++
T Consensus 9 lA~alsmDAFav~l~~G~~~~k~~~~~~L~ia~~fG~f~~i~pliG~~~g~~~s~---------~i~~~~~w--igf~lL 77 (190)
T COG1971 9 LAIALSMDAFAVSLGKGLAKHKIRFKEALVIALIFGVFQAIMPLIGWFIGKFLST---------FIAEWAHW--IGFVLL 77 (190)
T ss_pred HHHHHhhHHHHHHHHhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHH--HHHHHH
Confidence 455556555444333 333333334556666655555555556666666654420 01111111 223455
Q ss_pred HHHHHHHHHHHHHHhHHH
Q 005931 602 LYLGVELIRHRLRKLEWR 619 (669)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~ 619 (669)
+.++.+.+++-+++.+..
T Consensus 78 ~~lG~~mI~e~f~~~~~~ 95 (190)
T COG1971 78 IILGLKMIIEGFKNEEDE 95 (190)
T ss_pred HHHHHHHHHHHhchhhcc
Confidence 667778888888775443
No 280
>COG4280 Predicted membrane protein [Function unknown]
Probab=20.05 E-value=7.3e+02 Score=23.74 Aligned_cols=19 Identities=32% Similarity=0.639 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHhH
Q 005931 599 FLFLYLGVELIRHRLRKLE 617 (669)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~ 617 (669)
++.++++++.++...|...
T Consensus 72 vLLllFG~rw~Rsavrr~a 90 (236)
T COG4280 72 VLLLLFGYRWIRSAVRRFA 90 (236)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 5566677888777766655
No 281
>COG4325 Predicted membrane protein [Function unknown]
Probab=20.03 E-value=1e+03 Score=25.26 Aligned_cols=25 Identities=4% Similarity=-0.043 Sum_probs=14.7
Q ss_pred hhHHHHHHHHHHHHHhccccCCCcc
Q 005931 472 NTIILVAILIATVTYTGGISPPGGV 496 (669)
Q Consensus 472 ~~~~~va~liatvtf~a~~~~Pgg~ 496 (669)
+.+-+.++.-|-++-.-||++|-|-
T Consensus 36 ~~~WvipA~~vv~al~fgf~L~~~~ 60 (464)
T COG4325 36 GAVWVIPAFGVVIALGFGFVLSMIP 60 (464)
T ss_pred cceeeehHHHHHHHHHHHHhhcccc
Confidence 4444555555555555677777664
Done!