Query 005932
Match_columns 669
No_of_seqs 380 out of 1554
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 11:23:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005932.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005932hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n0q_A 3ANK, 3 ankyrin repeats 99.0 1.6E-10 5.3E-15 97.4 5.7 62 429-490 29-90 (93)
2 4gpm_A Engineered protein OR26 98.9 5.9E-10 2E-14 106.0 5.0 59 431-489 99-157 (169)
3 1n0q_A 3ANK, 3 ankyrin repeats 98.9 7.1E-10 2.4E-14 93.3 4.8 59 434-492 1-59 (93)
4 3aaa_C Myotrophin, protein V-1 98.9 7.1E-10 2.4E-14 97.6 4.5 60 431-490 36-95 (123)
5 4gpm_A Engineered protein OR26 98.9 1.1E-09 3.8E-14 104.1 5.7 64 429-492 64-127 (169)
6 3aaa_C Myotrophin, protein V-1 98.9 1.5E-09 5.2E-14 95.5 5.2 56 429-484 67-122 (123)
7 2zgd_A 3 repeat synthetic anky 98.8 2.7E-09 9.1E-14 93.0 4.8 56 431-486 53-108 (110)
8 1d9s_A Cyclin-dependent kinase 98.8 2.7E-09 9.1E-14 95.7 4.3 60 430-489 72-132 (136)
9 3c5r_A BARD-1, BRCA1-associate 98.8 4.5E-09 1.5E-13 94.0 5.3 55 431-485 72-126 (137)
10 1dcq_A PYK2-associated protein 98.8 3.9E-09 1.3E-13 107.7 5.4 60 430-489 200-259 (278)
11 2l6b_A NR1C; ankyrin, consensu 98.8 3E-09 1E-13 92.3 3.9 63 430-492 37-99 (115)
12 2jab_A H10-2-G3; HER2, darpin, 98.7 5.7E-09 1.9E-13 93.6 5.0 58 432-489 44-101 (136)
13 1n0r_A 4ANK, 4 ankyrin repeats 98.7 7.7E-09 2.6E-13 89.4 5.5 60 431-490 64-123 (126)
14 4b93_B Ankyrin repeat domain-c 98.7 4.9E-09 1.7E-13 106.2 4.9 56 430-485 180-236 (269)
15 3c5r_A BARD-1, BRCA1-associate 98.7 8.2E-09 2.8E-13 92.2 5.3 63 430-492 38-100 (137)
16 3f6q_A Integrin-linked protein 98.7 1.9E-08 6.6E-13 93.9 7.9 71 430-500 100-172 (179)
17 2jab_A H10-2-G3; HER2, darpin, 98.7 9.2E-09 3.2E-13 92.2 5.2 60 430-489 75-134 (136)
18 1oy3_D Transcription factor in 98.7 1.2E-08 4.2E-13 100.3 6.3 61 433-493 190-250 (282)
19 1awc_B Protein (GA binding pro 98.7 1.1E-08 3.8E-13 93.1 5.2 62 430-491 62-123 (153)
20 1bi7_B P16INK4A, MTS1, multipl 98.7 6.7E-09 2.3E-13 95.3 3.6 62 430-491 72-134 (156)
21 1bd8_A P19INK4D CDK4/6 inhibit 98.7 1.1E-08 3.9E-13 92.7 4.9 60 430-489 63-122 (156)
22 1ikn_D Protein (I-kappa-B-alph 98.7 1.9E-08 6.5E-13 97.6 6.8 64 431-494 146-210 (236)
23 2l6b_A NR1C; ankyrin, consensu 98.7 1.2E-08 4.2E-13 88.4 4.8 62 431-492 5-66 (115)
24 1k1a_A B-cell lymphoma 3-encod 98.7 1.2E-08 4.3E-13 98.2 5.3 59 430-488 178-236 (241)
25 1ihb_A P18-INK4C(INK6), cyclin 98.7 1.4E-08 4.9E-13 92.4 5.4 64 430-493 65-128 (162)
26 3ehr_A Osteoclast-stimulating 98.7 8E-09 2.7E-13 99.8 3.9 60 430-489 135-194 (222)
27 3twr_A Tankyrase-2; ankyrin re 98.7 1.6E-08 5.4E-13 92.8 5.6 61 430-490 70-130 (165)
28 1ycs_B 53BP2, P53BP2; ankyrin 98.7 1.1E-08 3.6E-13 100.8 4.8 64 429-492 64-127 (239)
29 3twr_A Tankyrase-2; ankyrin re 98.7 2.2E-08 7.6E-13 91.8 6.6 58 430-488 103-160 (165)
30 3deo_A Signal recognition part 98.7 1.4E-08 4.8E-13 95.7 5.3 63 429-491 70-133 (183)
31 1awc_B Protein (GA binding pro 98.7 1.3E-08 4.5E-13 92.6 4.9 58 430-487 95-152 (153)
32 1d9s_A Cyclin-dependent kinase 98.7 2.7E-08 9.3E-13 89.1 6.8 62 430-492 7-68 (136)
33 2zgd_A 3 repeat synthetic anky 98.7 9.9E-09 3.4E-13 89.4 3.8 64 429-492 18-81 (110)
34 2dzn_A Probable 26S proteasome 98.6 2.5E-08 8.6E-13 95.4 6.2 56 430-485 169-225 (228)
35 3v30_A DNA-binding protein rfx 98.6 1.9E-08 6.5E-13 92.9 5.0 58 431-488 98-155 (172)
36 1sw6_A Regulatory protein SWI6 98.6 1.8E-08 6.2E-13 104.2 5.4 50 429-478 277-326 (327)
37 3f6q_A Integrin-linked protein 98.6 2.4E-08 8.3E-13 93.2 5.7 63 430-492 67-129 (179)
38 2b0o_E UPLC1; arfgap, structur 98.6 1.8E-08 6.3E-13 104.0 5.1 60 430-489 221-280 (301)
39 1ihb_A P18-INK4C(INK6), cyclin 98.6 2.1E-08 7.1E-13 91.3 4.8 62 430-491 98-160 (162)
40 4b93_B Ankyrin repeat domain-c 98.6 1.6E-08 5.6E-13 102.3 4.4 62 430-491 147-208 (269)
41 3v31_A Ankyrin repeat family A 98.6 2.3E-08 7.9E-13 91.9 5.0 57 431-487 98-154 (167)
42 2y1l_E Darpin-8.4; hydrolase-i 98.6 2.3E-08 7.9E-13 92.7 5.0 59 431-489 76-134 (169)
43 3lvq_E ARF-GAP with SH3 domain 98.6 1.6E-08 5.6E-13 111.0 4.7 62 430-491 202-263 (497)
44 2vge_A RELA-associated inhibit 98.6 2.7E-08 9.2E-13 98.2 5.4 63 430-492 49-111 (229)
45 3ui2_A Signal recognition part 98.6 2.9E-08 9.9E-13 98.5 5.5 64 429-492 71-135 (244)
46 1s70_B 130 kDa myosin-binding 98.6 5.3E-08 1.8E-12 97.2 7.4 47 431-477 228-274 (299)
47 2rfm_A Putative ankyrin repeat 98.6 2.8E-08 9.4E-13 93.7 5.0 57 432-488 98-154 (192)
48 1oy3_D Transcription factor in 98.6 2.9E-08 1E-12 97.6 5.1 63 430-492 40-102 (282)
49 3v30_A DNA-binding protein rfx 98.6 3E-08 1E-12 91.5 4.8 57 432-488 33-89 (172)
50 2rfm_A Putative ankyrin repeat 98.6 3.5E-08 1.2E-12 92.9 5.2 59 430-488 129-187 (192)
51 2rfa_A Transient receptor pote 98.6 3.9E-08 1.3E-12 94.7 5.7 64 429-492 115-182 (232)
52 3aji_A 26S proteasome non-ATPa 98.6 3E-08 1E-12 95.3 4.8 59 430-488 167-225 (231)
53 3t8k_A Uncharacterized protein 98.6 4.8E-08 1.7E-12 94.0 6.2 60 430-489 70-141 (186)
54 4hbd_A KN motif and ankyrin re 98.6 3.4E-08 1.2E-12 99.7 5.3 59 431-489 179-237 (276)
55 1n0r_A 4ANK, 4 ankyrin repeats 98.6 4.6E-08 1.6E-12 84.5 5.4 63 430-492 30-92 (126)
56 2y1l_E Darpin-8.4; hydrolase-i 98.6 4.6E-08 1.6E-12 90.6 5.7 58 431-488 109-166 (169)
57 3ehr_A Osteoclast-stimulating 98.6 3.4E-08 1.2E-12 95.3 4.7 62 430-491 101-163 (222)
58 3v31_A Ankyrin repeat family A 98.6 4.8E-08 1.7E-12 89.7 5.4 58 432-489 33-90 (167)
59 3hra_A Ankyrin repeat family p 98.6 5.9E-08 2E-12 91.2 6.0 61 430-490 34-94 (201)
60 1yyh_A HN1;, notch 1, ankyrin 98.6 3.4E-08 1.1E-12 97.5 4.5 58 431-488 186-243 (253)
61 3hra_A Ankyrin repeat family p 98.5 4.4E-08 1.5E-12 92.1 5.0 58 431-488 136-198 (201)
62 1yyh_A HN1;, notch 1, ankyrin 98.5 4.9E-08 1.7E-12 96.3 5.3 63 430-492 152-214 (253)
63 1s70_B 130 kDa myosin-binding 98.5 5.5E-08 1.9E-12 97.1 5.6 61 431-491 69-129 (299)
64 3utm_A Tankyrase-1; tankyrase, 98.5 5.5E-08 1.9E-12 98.3 5.6 63 430-492 242-304 (351)
65 4hbd_A KN motif and ankyrin re 98.5 4.3E-08 1.5E-12 99.0 4.5 60 430-489 211-271 (276)
66 2f8y_A Notch homolog 1, transl 98.5 6.8E-08 2.3E-12 92.3 5.5 61 430-490 153-213 (223)
67 2fo1_E LIN-12 protein; beta-ba 98.5 5.3E-08 1.8E-12 102.4 5.0 63 430-492 308-370 (373)
68 1bd8_A P19INK4D CDK4/6 inhibit 98.5 5.4E-08 1.8E-12 88.2 4.3 58 430-488 96-153 (156)
69 1dcq_A PYK2-associated protein 98.5 6.1E-08 2.1E-12 98.8 5.0 64 429-492 163-229 (278)
70 2f8y_A Notch homolog 1, transl 98.5 8.2E-08 2.8E-12 91.7 5.5 63 430-492 120-182 (223)
71 1sw6_A Regulatory protein SWI6 98.5 6.5E-08 2.2E-12 100.0 5.2 50 431-480 127-176 (327)
72 3utm_A Tankyrase-1; tankyrase, 98.5 8.3E-08 2.9E-12 96.9 5.7 60 431-490 87-146 (351)
73 1bi7_B P16INK4A, MTS1, multipl 98.5 1.2E-07 4E-12 86.9 6.1 60 431-491 8-67 (156)
74 3jxi_A Vanilloid receptor-rela 98.5 6E-08 2E-12 95.3 4.5 60 430-489 88-161 (260)
75 3ljn_A Hypothetical protein; a 98.5 4.2E-08 1.4E-12 101.5 3.5 62 429-490 205-266 (364)
76 3b7b_A Euchromatic histone-lys 98.5 1.3E-07 4.3E-12 91.3 6.3 52 431-482 173-224 (237)
77 2etb_A Transient receptor pote 98.5 1.1E-07 3.7E-12 93.4 5.8 60 430-489 85-157 (256)
78 3deo_A Signal recognition part 98.5 5.9E-08 2E-12 91.4 3.4 45 433-477 108-152 (183)
79 1ikn_D Protein (I-kappa-B-alph 98.5 9.2E-08 3.1E-12 92.8 4.9 63 429-491 111-174 (236)
80 2pnn_A Transient receptor pote 98.5 1.2E-07 4E-12 94.3 5.6 60 430-489 96-169 (273)
81 3t8k_A Uncharacterized protein 98.5 9E-08 3.1E-12 92.1 4.6 59 433-491 36-104 (186)
82 2xai_A ASB-9, ankyrin repeat a 98.5 1.1E-07 3.8E-12 94.4 5.3 63 430-492 31-93 (261)
83 1k1a_A B-cell lymphoma 3-encod 98.5 1.2E-07 4.2E-12 91.1 5.4 60 433-492 148-207 (241)
84 2dzn_A Probable 26S proteasome 98.4 1.3E-07 4.3E-12 90.5 5.4 59 430-488 135-194 (228)
85 2vge_A RELA-associated inhibit 98.4 2.2E-07 7.6E-12 91.6 7.1 60 430-489 82-144 (229)
86 1wdy_A 2-5A-dependent ribonucl 98.4 1.4E-07 4.7E-12 92.3 5.5 62 430-491 214-276 (285)
87 3ui2_A Signal recognition part 98.4 1.3E-07 4.4E-12 93.8 5.2 44 433-476 109-152 (244)
88 3aji_A 26S proteasome non-ATPa 98.4 1.4E-07 4.9E-12 90.5 5.4 63 430-492 134-196 (231)
89 3eu9_A Huntingtin-interacting 98.4 1.1E-07 3.8E-12 90.8 4.5 59 433-491 175-233 (240)
90 3b7b_A Euchromatic histone-lys 98.4 1.7E-07 5.7E-12 90.4 4.9 63 430-492 139-201 (237)
91 2etb_A Transient receptor pote 98.4 1.8E-07 6E-12 91.9 5.1 58 432-489 133-202 (256)
92 2xai_A ASB-9, ankyrin repeat a 98.4 1.5E-07 5.2E-12 93.4 4.7 58 434-491 2-59 (261)
93 3lvq_E ARF-GAP with SH3 domain 98.4 2.3E-07 8E-12 101.8 6.6 73 420-492 156-231 (497)
94 1wdy_A 2-5A-dependent ribonucl 98.4 2.1E-07 7.3E-12 90.9 5.4 59 431-489 68-126 (285)
95 2rfa_A Transient receptor pote 98.4 2.4E-07 8.1E-12 89.3 5.5 63 430-492 70-145 (232)
96 3d9h_A CDNA FLJ77766, highly s 98.4 1.9E-07 6.5E-12 94.4 5.0 63 430-492 87-149 (285)
97 3d9h_A CDNA FLJ77766, highly s 98.4 2.1E-07 7.3E-12 94.0 5.3 61 430-491 120-180 (285)
98 1n11_A Ankyrin; clathrin, BAND 98.4 1.9E-07 6.5E-12 98.9 5.1 58 430-487 339-396 (437)
99 1ycs_B 53BP2, P53BP2; ankyrin 98.4 1.8E-07 6.2E-12 92.0 4.6 59 429-487 97-158 (239)
100 3jxi_A Vanilloid receptor-rela 98.4 2.2E-07 7.4E-12 91.3 5.1 46 431-476 136-184 (260)
101 1n11_A Ankyrin; clathrin, BAND 98.4 2E-07 6.8E-12 98.7 4.9 63 430-492 306-368 (437)
102 3jue_A Arfgap with coiled-coil 98.4 1.9E-07 6.5E-12 99.9 4.8 58 433-490 233-290 (368)
103 2pnn_A Transient receptor pote 98.4 2.4E-07 8.3E-12 92.0 4.9 48 431-478 144-194 (273)
104 4g8k_A 2-5A-dependent ribonucl 98.3 1.6E-07 5.4E-12 96.2 3.0 57 433-489 57-113 (337)
105 3kea_A K1L; tropism, ANK repea 98.3 2.3E-07 7.8E-12 93.9 3.7 65 430-494 90-155 (285)
106 3kea_A K1L; tropism, ANK repea 98.3 1.9E-07 6.4E-12 94.6 3.0 58 434-491 61-118 (285)
107 2b0o_E UPLC1; arfgap, structur 98.3 2.5E-07 8.5E-12 95.5 4.0 62 431-492 186-250 (301)
108 3jue_A Arfgap with coiled-coil 98.3 4.6E-07 1.6E-11 96.9 5.4 59 430-488 263-321 (368)
109 2fo1_E LIN-12 protein; beta-ba 98.3 3.8E-07 1.3E-11 95.8 4.6 60 430-489 161-220 (373)
110 3ljn_A Hypothetical protein; a 98.3 5.8E-07 2E-11 93.0 5.4 63 430-492 168-235 (364)
111 4g8k_A 2-5A-dependent ribonucl 98.2 5.1E-07 1.7E-11 92.4 4.2 58 432-489 236-294 (337)
112 3eu9_A Huntingtin-interacting 98.1 1.5E-06 5.2E-11 82.8 5.0 60 432-491 73-132 (240)
113 2aja_A Ankyrin repeat family p 97.7 4.2E-06 1.4E-10 89.7 -0.7 54 436-489 164-220 (376)
114 2aja_A Ankyrin repeat family p 97.5 9.3E-06 3.2E-10 87.0 -2.1 62 431-493 124-188 (376)
115 1zu1_A DSRBP-ZFA, RNA binding 95.9 0.0026 8.8E-08 58.5 2.1 39 75-113 29-67 (127)
116 1zr9_A Zinc finger protein 593 88.7 0.19 6.3E-06 46.3 2.3 45 77-123 49-93 (124)
117 1zu1_A DSRBP-ZFA, RNA binding 88.7 0.2 7E-06 45.7 2.6 36 75-110 90-125 (127)
118 1znf_A 31ST zinc finger from X 76.8 1.4 4.8E-05 27.1 2.2 22 79-100 2-23 (27)
119 3mjh_B Early endosome antigen 75.0 0.91 3.1E-05 32.7 1.0 26 76-101 3-28 (34)
120 2kvf_A Zinc finger and BTB dom 74.5 1.4 4.9E-05 27.4 1.8 23 78-100 3-25 (28)
121 1fu9_A U-shaped transcriptiona 74.4 1.6 5.6E-05 31.8 2.1 23 77-99 7-29 (36)
122 1wg2_A Zinc finger (AN1-like) 74.3 2.5 8.5E-05 34.7 3.5 27 629-656 14-41 (64)
123 2das_A Zinc finger MYM-type pr 72.5 6.8 0.00023 31.7 5.5 38 627-664 17-57 (62)
124 1ard_A Yeast transcription fac 72.2 1.5 5.3E-05 27.2 1.5 23 78-100 2-24 (29)
125 2kvg_A Zinc finger and BTB dom 71.8 1.6 5.4E-05 27.4 1.5 23 78-100 3-25 (27)
126 2l8e_A Polyhomeotic-like prote 71.4 1.2 4.1E-05 34.6 0.9 30 631-662 19-48 (49)
127 2kvh_A Zinc finger and BTB dom 71.3 1.5 5.2E-05 27.2 1.3 23 78-100 3-25 (27)
128 1x4s_A Protein FON, zinc finge 71.1 1.1 3.8E-05 36.1 0.7 35 630-664 11-47 (59)
129 1rik_A E6APC1 peptide; E6-bind 71.1 1.6 5.3E-05 27.3 1.3 22 79-100 3-24 (29)
130 2lvu_A Zinc finger and BTB dom 71.5 1 3.6E-05 27.7 0.0 22 79-100 3-24 (26)
131 2yqq_A Zinc finger HIT domain- 68.3 4.3 0.00015 32.4 3.5 33 631-665 13-45 (56)
132 2m0f_A Zinc finger and BTB dom 67.2 2.2 7.6E-05 26.4 1.4 23 78-100 2-24 (29)
133 1srk_A Zinc finger protein ZFP 66.0 2.6 8.8E-05 27.8 1.6 23 78-100 7-29 (35)
134 2elx_A Zinc finger protein 406 65.4 2.3 8E-05 27.8 1.3 23 78-100 7-29 (35)
135 1paa_A Yeast transcription fac 65.2 3.2 0.00011 26.0 1.9 20 78-97 2-21 (30)
136 2m0d_A Zinc finger and BTB dom 64.7 2.6 9E-05 26.1 1.4 23 78-100 3-25 (30)
137 1klr_A Zinc finger Y-chromosom 64.5 2.6 8.9E-05 26.2 1.3 22 78-99 2-23 (30)
138 1p7a_A BF3, BKLF, kruppel-like 64.5 3.4 0.00012 27.5 2.1 23 78-100 11-33 (37)
139 2elv_A Zinc finger protein 406 62.9 3.3 0.00011 27.5 1.7 23 78-100 9-31 (36)
140 2ytb_A Zinc finger protein 32; 62.4 3.9 0.00013 28.1 2.1 23 78-100 11-33 (42)
141 3j21_V 50S ribosomal protein L 62.1 4.1 0.00014 33.6 2.4 34 630-664 4-43 (66)
142 2elo_A Zinc finger protein 406 61.7 2.6 8.8E-05 28.2 1.0 23 78-100 9-31 (37)
143 2elr_A Zinc finger protein 406 61.6 3.7 0.00013 27.1 1.8 22 78-99 9-30 (36)
144 2lvt_A Zinc finger and BTB dom 65.7 1.7 5.8E-05 27.3 0.0 22 79-100 3-24 (29)
145 2lvr_A Zinc finger and BTB dom 65.5 1.7 5.9E-05 27.3 0.0 23 78-100 3-25 (30)
146 2eos_A B-cell lymphoma 6 prote 61.2 4.5 0.00015 27.9 2.3 23 78-100 11-33 (42)
147 2elq_A Zinc finger protein 406 60.3 2.9 0.0001 27.8 1.1 23 78-100 9-31 (36)
148 1njq_A Superman protein; zinc- 60.0 3.4 0.00012 28.1 1.4 23 78-100 6-28 (39)
149 1rim_A E6APC2 peptide; E6-bind 59.7 3.5 0.00012 27.2 1.4 22 79-100 3-24 (33)
150 2eon_A ZFP-95, zinc finger pro 59.2 5.1 0.00018 28.3 2.3 23 78-100 12-34 (46)
151 2yte_A Zinc finger protein 473 59.2 3.7 0.00013 28.2 1.5 23 78-100 10-32 (42)
152 2elt_A Zinc finger protein 406 59.1 3.1 0.00011 27.5 1.0 22 78-99 9-30 (36)
153 2enf_A Zinc finger protein 347 59.1 5 0.00017 28.2 2.2 23 78-100 12-34 (46)
154 2emg_A Zinc finger protein 484 58.8 5 0.00017 28.2 2.2 23 78-100 12-34 (46)
155 2en7_A Zinc finger protein 268 58.6 4.9 0.00017 27.8 2.1 23 78-100 12-34 (44)
156 2ep1_A Zinc finger protein 484 58.4 4.8 0.00016 28.3 2.0 23 78-100 12-34 (46)
157 2els_A Zinc finger protein 406 57.8 3.8 0.00013 27.2 1.3 22 78-99 9-30 (36)
158 2yth_A Zinc finger protein 224 57.6 5.6 0.00019 28.0 2.3 23 78-100 12-34 (46)
159 2yts_A Zinc finger protein 484 57.5 4.7 0.00016 28.3 1.8 23 78-100 12-34 (46)
160 2yti_A Zinc finger protein 347 57.5 5.2 0.00018 28.1 2.1 23 78-100 12-34 (46)
161 2eq2_A Zinc finger protein 347 57.5 5.5 0.00019 28.0 2.2 23 78-100 12-34 (46)
162 2el5_A Zinc finger protein 268 57.3 4.4 0.00015 27.8 1.6 23 78-100 10-32 (42)
163 2eop_A Zinc finger protein 268 57.1 5.6 0.00019 27.9 2.2 23 78-100 12-34 (46)
164 2epv_A Zinc finger protein 268 57.0 4.5 0.00015 28.4 1.6 23 78-100 12-34 (44)
165 2ept_A Zinc finger protein 32; 56.8 4.9 0.00017 27.5 1.8 23 78-100 10-32 (41)
166 2ytp_A Zinc finger protein 484 56.7 4.7 0.00016 28.5 1.7 23 78-100 12-34 (46)
167 2eq1_A Zinc finger protein 347 56.5 5.5 0.00019 28.0 2.1 23 78-100 12-34 (46)
168 2i5o_A DNA polymerase ETA; zin 56.3 2.8 9.5E-05 31.1 0.4 25 76-103 7-31 (39)
169 2ytf_A Zinc finger protein 268 56.2 4.2 0.00015 28.5 1.4 23 78-100 12-34 (46)
170 2emi_A Zinc finger protein 484 56.1 4.7 0.00016 28.4 1.6 23 78-100 12-34 (46)
171 2emb_A Zinc finger protein 473 56.1 5.2 0.00018 27.9 1.8 23 78-100 12-34 (44)
172 2em6_A Zinc finger protein 224 56.0 6 0.00021 27.9 2.2 23 78-100 12-34 (46)
173 2elz_A Zinc finger protein 224 55.7 6.4 0.00022 27.7 2.3 23 78-100 12-34 (46)
174 2eoj_A Zinc finger protein 268 55.6 5 0.00017 27.9 1.7 23 78-100 12-34 (44)
175 2yrj_A Zinc finger protein 473 55.6 5 0.00017 28.2 1.7 23 78-100 12-34 (46)
176 2ep3_A Zinc finger protein 484 55.4 5.1 0.00017 28.2 1.7 23 78-100 12-34 (46)
177 2m0e_A Zinc finger and BTB dom 55.4 4.9 0.00017 24.6 1.4 22 78-99 2-23 (29)
178 2eq3_A Zinc finger protein 347 55.3 5 0.00017 28.1 1.7 23 78-100 12-34 (46)
179 2epz_A Zinc finger protein 28 55.2 6.2 0.00021 27.7 2.1 23 78-100 12-34 (46)
180 2ytn_A Zinc finger protein 347 55.0 6.6 0.00023 27.6 2.3 23 78-100 12-34 (46)
181 2em7_A Zinc finger protein 224 54.7 5.7 0.00019 27.9 1.9 23 78-100 12-34 (46)
182 2emf_A Zinc finger protein 484 54.6 5.7 0.00019 28.0 1.9 23 78-100 12-34 (46)
183 2eof_A Zinc finger protein 268 54.5 4.1 0.00014 28.3 1.1 23 78-100 12-34 (44)
184 2en9_A Zinc finger protein 28 54.4 4.9 0.00017 28.4 1.5 23 78-100 12-34 (46)
185 2em0_A Zinc finger protein 224 54.1 6.7 0.00023 27.5 2.2 23 78-100 12-34 (46)
186 2ytq_A Zinc finger protein 268 54.0 6.9 0.00024 27.5 2.3 23 78-100 12-34 (46)
187 2ytr_A Zinc finger protein 347 54.0 6.4 0.00022 27.6 2.0 23 78-100 12-34 (46)
188 2enh_A Zinc finger protein 28 53.9 6 0.00021 27.9 1.9 23 78-100 12-34 (46)
189 2epc_A Zinc finger protein 32; 53.4 4.3 0.00015 27.8 1.0 22 78-99 11-32 (42)
190 2el4_A Zinc finger protein 268 53.3 6 0.00021 27.7 1.8 23 78-100 12-34 (46)
191 1sp2_A SP1F2; zinc finger, tra 53.1 7.7 0.00026 24.6 2.2 23 78-100 2-26 (31)
192 2elp_A Zinc finger protein 406 52.9 4.3 0.00015 27.1 0.9 22 78-99 9-31 (37)
193 1vq8_U 50S ribosomal protein L 52.9 5.5 0.00019 32.8 1.7 34 631-664 4-42 (66)
194 2eor_A Zinc finger protein 224 52.9 4.4 0.00015 28.5 1.0 23 78-100 12-34 (46)
195 2eoy_A Zinc finger protein 473 52.5 5.1 0.00018 28.3 1.3 23 78-100 12-34 (46)
196 2em9_A Zinc finger protein 224 52.4 6.4 0.00022 27.6 1.8 23 78-100 12-34 (46)
197 2eom_A ZFP-95, zinc finger pro 52.2 6.1 0.00021 27.9 1.7 23 78-100 12-34 (46)
198 2ene_A Zinc finger protein 347 52.1 6.2 0.00021 27.7 1.7 23 78-100 12-34 (46)
199 2en2_A B-cell lymphoma 6 prote 52.1 5.5 0.00019 27.3 1.4 22 78-99 11-32 (42)
200 2epx_A Zinc finger protein 28 51.8 7.3 0.00025 27.3 2.1 22 78-99 12-33 (47)
201 2eq0_A Zinc finger protein 347 51.7 6.3 0.00021 27.7 1.7 23 78-100 12-34 (46)
202 2elm_A Zinc finger protein 406 51.7 5.3 0.00018 26.9 1.2 20 78-97 9-28 (37)
203 2eou_A Zinc finger protein 473 51.4 5.6 0.00019 27.8 1.4 23 78-100 12-34 (44)
204 2em5_A ZFP-95, zinc finger pro 51.4 6.4 0.00022 27.7 1.7 23 78-100 12-34 (46)
205 2emj_A Zinc finger protein 28 51.4 4.8 0.00016 28.4 1.0 23 78-100 12-34 (46)
206 2ema_A Zinc finger protein 347 51.3 6.3 0.00021 27.7 1.6 23 78-100 12-34 (46)
207 2eoh_A Zinc finger protein 28 51.3 6.4 0.00022 27.7 1.7 23 78-100 12-34 (46)
208 1bbo_A Human enhancer-binding 51.3 5.3 0.00018 29.2 1.3 25 77-101 28-52 (57)
209 2yrm_A B-cell lymphoma 6 prote 51.1 5.9 0.0002 27.6 1.5 23 78-100 10-32 (43)
210 2eq4_A Zinc finger protein 224 51.1 6 0.0002 27.7 1.5 23 78-100 12-34 (46)
211 2eoe_A Zinc finger protein 347 51.0 6.3 0.00021 27.6 1.6 23 78-100 12-34 (46)
212 2em3_A Zinc finger protein 28 50.9 5 0.00017 28.3 1.0 23 78-100 12-34 (46)
213 2epu_A Zinc finger protein 32; 50.8 6 0.0002 27.7 1.4 23 78-100 12-34 (45)
214 3iuf_A Zinc finger protein UBI 50.8 5.3 0.00018 29.0 1.2 22 78-99 7-28 (48)
215 2ep2_A Zinc finger protein 484 50.7 5.9 0.0002 27.9 1.4 23 78-100 12-34 (46)
216 1zfd_A SWI5; DNA binding motif 50.7 7.1 0.00024 24.9 1.7 23 78-100 3-27 (32)
217 2eov_A Zinc finger protein 484 50.6 6.2 0.00021 27.6 1.5 22 78-99 12-33 (46)
218 2e72_A POGO transposable eleme 50.4 7.9 0.00027 30.0 2.1 25 75-99 9-33 (49)
219 2eow_A Zinc finger protein 347 50.3 5.1 0.00017 28.1 1.0 23 78-100 12-34 (46)
220 2jvx_A NF-kappa-B essential mo 50.2 7.4 0.00025 26.8 1.7 22 78-99 3-24 (28)
221 2eml_A Zinc finger protein 28 50.2 6.7 0.00023 27.6 1.6 23 78-100 12-34 (46)
222 2yto_A Zinc finger protein 484 50.2 5.2 0.00018 28.2 1.0 23 78-100 12-34 (46)
223 2ysp_A Zinc finger protein 224 50.2 6.3 0.00022 27.7 1.5 23 78-100 12-34 (46)
224 2en8_A Zinc finger protein 224 50.1 6.9 0.00024 27.4 1.7 23 78-100 12-34 (46)
225 2eme_A Zinc finger protein 473 49.7 6.9 0.00023 27.4 1.6 23 78-100 12-34 (46)
226 2eoz_A Zinc finger protein 473 49.5 4.8 0.00016 28.4 0.8 23 78-100 12-34 (46)
227 2emx_A Zinc finger protein 268 49.5 5.4 0.00018 27.8 1.0 23 78-100 10-32 (44)
228 2eoq_A Zinc finger protein 224 49.5 6.3 0.00022 27.7 1.4 23 78-100 12-34 (46)
229 2emk_A Zinc finger protein 28 49.4 6.8 0.00023 27.6 1.6 23 78-100 12-34 (46)
230 2el6_A Zinc finger protein 268 49.4 7 0.00024 27.5 1.6 23 78-100 12-34 (46)
231 2en1_A Zinc finger protein 224 49.2 6.8 0.00023 27.5 1.6 23 78-100 12-34 (46)
232 2yrk_A Zinc finger homeobox pr 49.2 9.4 0.00032 30.3 2.4 36 78-113 13-48 (55)
233 2emz_A ZFP-95, zinc finger pro 49.1 6.5 0.00022 27.7 1.4 23 78-100 12-34 (46)
234 2ep0_A Zinc finger protein 28 49.0 7.4 0.00025 27.3 1.7 24 77-100 11-34 (46)
235 2em4_A Zinc finger protein 28 48.9 5.6 0.00019 28.1 1.0 23 78-100 12-34 (46)
236 1fv5_A First zinc finger of U- 48.7 7.4 0.00025 27.6 1.6 21 78-98 8-28 (36)
237 2ytt_A Zinc finger protein 473 48.4 8.6 0.00029 27.0 2.0 24 77-100 11-34 (46)
238 2ytm_A Zinc finger protein 28 48.3 6.8 0.00023 27.6 1.4 23 78-100 12-34 (46)
239 2kfq_A FP1; protein, de novo p 48.3 2.4 8.1E-05 27.8 -1.0 23 78-100 2-24 (32)
240 2w0t_A Lethal(3)malignant brai 48.1 11 0.00036 28.6 2.4 32 630-662 6-37 (43)
241 2ytg_A ZFP-95, zinc finger pro 48.0 6.5 0.00022 27.6 1.3 23 78-100 12-34 (46)
242 2emh_A Zinc finger protein 484 48.0 5.8 0.0002 27.9 1.0 22 78-99 12-33 (46)
243 2emy_A Zinc finger protein 268 47.9 5.9 0.0002 27.9 1.0 23 78-100 12-34 (46)
244 2ytj_A Zinc finger protein 484 47.8 5.9 0.0002 27.8 1.0 23 78-100 12-34 (46)
245 2eox_A Zinc finger protein 473 47.7 4.3 0.00015 28.3 0.2 23 78-100 12-34 (44)
246 2en3_A ZFP-95, zinc finger pro 47.5 5.2 0.00018 28.2 0.6 23 78-100 12-34 (46)
247 2ab3_A ZNF29; zinc finger prot 47.4 7.5 0.00026 23.8 1.4 22 79-100 3-26 (29)
248 2ely_A Zinc finger protein 224 47.1 5.9 0.0002 27.9 0.9 23 78-100 12-34 (46)
249 2eoo_A ZFP-95, zinc finger pro 47.1 6.1 0.00021 27.8 1.0 23 78-100 12-34 (46)
250 1yui_A GAGA-factor; complex (D 46.5 7 0.00024 28.8 1.3 24 77-100 23-46 (54)
251 2enc_A Zinc finger protein 224 46.5 6.4 0.00022 27.7 1.0 23 78-100 12-34 (46)
252 2yu5_A Zinc finger protein 473 46.4 6.2 0.00021 27.4 0.9 23 78-100 12-34 (44)
253 2em8_A Zinc finger protein 224 46.3 6.5 0.00022 27.7 1.0 24 77-100 11-34 (46)
254 2em2_A Zinc finger protein 28 45.9 7.4 0.00025 27.4 1.3 23 78-100 12-34 (46)
255 1bbo_A Human enhancer-binding 45.7 8 0.00027 28.3 1.5 22 79-100 2-23 (57)
256 2emm_A ZFP-95, zinc finger pro 45.6 7.6 0.00026 27.2 1.3 23 78-100 12-34 (46)
257 2epq_A POZ-, at HOOK-, and zin 45.1 7 0.00024 27.4 1.0 23 78-100 10-32 (45)
258 2ytk_A Zinc finger protein 347 44.9 7 0.00024 27.4 1.0 22 78-99 12-33 (46)
259 1twf_J DNA-directed RNA polyme 44.8 7.9 0.00027 32.2 1.4 13 631-643 5-17 (70)
260 2emp_A Zinc finger protein 347 44.5 8.2 0.00028 27.1 1.4 23 78-100 12-34 (46)
261 2epw_A Zinc finger protein 268 44.1 6.3 0.00021 27.6 0.6 23 78-100 12-34 (46)
262 2adr_A ADR1; transcription reg 44.0 10 0.00035 28.0 1.9 23 78-100 2-24 (60)
263 2ytd_A Zinc finger protein 473 43.9 7.4 0.00025 27.3 1.0 23 78-100 12-34 (46)
264 2en6_A Zinc finger protein 268 43.9 6.6 0.00023 27.6 0.8 23 78-100 12-34 (46)
265 2iyb_E Testin, TESS, TES; LIM 43.6 12 0.00042 29.2 2.4 31 630-660 32-62 (65)
266 3uk3_C Zinc finger protein 217 43.5 8.8 0.0003 28.0 1.4 23 78-100 4-26 (57)
267 2epr_A POZ-, at HOOK-, and zin 43.4 13 0.00044 26.5 2.3 24 77-100 11-34 (48)
268 2yu8_A Zinc finger protein 347 42.9 7 0.00024 27.4 0.8 22 78-99 12-33 (46)
269 1f2i_G Fusion of N-terminal 17 42.5 10 0.00035 29.3 1.7 23 78-100 49-71 (73)
270 2drp_A Protein (tramtrack DNA- 42.4 7.9 0.00027 29.3 1.0 24 77-100 39-62 (66)
271 2yso_A ZFP-95, zinc finger pro 42.1 9.1 0.00031 26.8 1.3 23 78-100 12-34 (46)
272 1wfl_A Zinc finger protein 216 42.1 18 0.0006 30.4 3.1 27 629-656 24-51 (74)
273 1ef4_A Subunit N, DNA-directed 42.0 8.4 0.00029 30.6 1.1 12 631-642 4-15 (55)
274 1lv3_A Hypothetical protein YA 42.0 9.4 0.00032 31.6 1.4 25 630-660 9-37 (68)
275 4gzn_C ZFP-57, zinc finger pro 41.0 11 0.00039 29.4 1.8 23 78-100 32-54 (60)
276 1x5w_A Zinc finger protein 64, 39.4 15 0.00051 28.2 2.2 23 78-100 9-31 (70)
277 4ayb_N DNA-directed RNA polyme 39.1 9.5 0.00032 31.4 1.0 13 631-643 5-17 (66)
278 3uk3_C Zinc finger protein 217 39.0 9.6 0.00033 27.8 1.0 23 78-100 32-54 (57)
279 2lce_A B-cell lymphoma 6 prote 38.0 15 0.00052 28.5 2.1 23 77-99 16-38 (74)
280 2dj8_A Protein CBFA2T1; zinc f 37.8 21 0.00073 28.0 2.9 33 627-664 12-48 (60)
281 2dmd_A Zinc finger protein 64, 37.6 20 0.00068 28.9 2.8 24 77-100 7-30 (96)
282 2epp_A POZ-, at HOOK-, and zin 37.2 14 0.00047 29.8 1.7 24 77-100 12-35 (66)
283 1wfp_A Zinc finger (AN1-like) 36.8 33 0.0011 28.8 3.9 28 628-656 23-51 (74)
284 3eph_A TRNA isopentenyltransfe 36.8 11 0.00038 40.9 1.5 35 77-111 359-399 (409)
285 1jjd_A Metallothionein, SMTA; 36.7 13 0.00046 29.4 1.5 33 632-664 9-41 (55)
286 2adr_A ADR1; transcription reg 36.3 14 0.00049 27.2 1.6 23 77-99 29-51 (60)
287 1x6e_A Zinc finger protein 24; 36.1 12 0.00043 28.9 1.3 22 78-99 42-63 (72)
288 2lce_A B-cell lymphoma 6 prote 36.0 11 0.00039 29.2 1.1 24 77-100 44-67 (74)
289 2cot_A Zinc finger protein 435 36.0 15 0.00052 28.7 1.8 23 78-100 46-68 (77)
290 3cw1_L U1 small nuclear ribonu 35.8 19 0.00065 30.4 2.4 37 78-114 3-41 (77)
291 4gzn_C ZFP-57, zinc finger pro 35.4 12 0.0004 29.3 1.0 23 78-100 4-26 (60)
292 2drp_A Protein (tramtrack DNA- 35.1 11 0.00039 28.3 0.9 23 78-100 10-32 (66)
293 1wfh_A Zinc finger (AN1-like) 35.0 36 0.0012 27.8 3.8 27 629-656 14-41 (64)
294 2lv2_A Insulinoma-associated p 34.9 15 0.00053 30.7 1.8 25 76-100 26-50 (85)
295 2csh_A Zinc finger protein 297 34.8 21 0.00072 29.7 2.6 24 78-101 65-88 (110)
296 1x5w_A Zinc finger protein 64, 34.8 13 0.00044 28.5 1.2 23 78-100 37-59 (70)
297 1x6e_A Zinc finger protein 24; 34.8 14 0.00047 28.6 1.3 24 77-100 13-36 (72)
298 2dmd_A Zinc finger protein 64, 34.6 16 0.00053 29.6 1.7 24 77-100 63-86 (96)
299 2eps_A POZ-, at HOOK-, and zin 34.0 18 0.00063 26.5 1.9 23 77-99 11-33 (54)
300 2cot_A Zinc finger protein 435 33.1 21 0.00073 27.8 2.3 24 77-100 17-40 (77)
301 2kmk_A Zinc finger protein GFI 32.8 13 0.00046 28.8 1.0 24 77-100 56-79 (82)
302 1va1_A Transcription factor SP 32.4 15 0.00052 24.5 1.1 23 78-100 8-32 (37)
303 1a1h_A QGSR zinc finger peptid 32.0 18 0.0006 28.8 1.6 24 77-100 61-84 (90)
304 2d9h_A Zinc finger protein 692 31.0 17 0.00057 28.4 1.3 23 77-99 37-59 (78)
305 2ct1_A Transcriptional repress 30.8 17 0.00059 28.4 1.3 23 78-100 45-67 (77)
306 2ct1_A Transcriptional repress 30.7 17 0.0006 28.3 1.3 23 77-99 14-36 (77)
307 2eln_A Zinc finger protein 406 30.7 19 0.00064 25.6 1.3 22 78-99 9-32 (38)
308 2yt9_A Zinc finger-containing 30.6 20 0.00069 28.8 1.8 23 77-99 64-86 (95)
309 2wbs_A Krueppel-like factor 4; 30.0 22 0.00075 28.1 1.8 24 77-100 64-87 (89)
310 2d9h_A Zinc finger protein 692 29.7 18 0.00063 28.2 1.3 23 78-100 7-29 (78)
311 2gqj_A Zinc finger protein KIA 29.6 19 0.00064 29.9 1.4 22 78-99 54-75 (98)
312 2kmk_A Zinc finger protein GFI 27.8 21 0.00071 27.7 1.3 22 79-100 2-23 (82)
313 1bhi_A CRE-BP1, ATF-2; CRE bin 27.7 22 0.00076 23.5 1.3 23 78-100 6-30 (38)
314 2ebt_A Krueppel-like factor 5; 27.6 25 0.00085 28.5 1.8 23 77-99 74-96 (100)
315 2lv2_A Insulinoma-associated p 26.6 23 0.00077 29.6 1.4 23 77-99 55-77 (85)
316 3qwp_A SET and MYND domain-con 26.5 21 0.0007 38.5 1.4 32 630-661 47-79 (429)
317 1x6h_A Transcriptional repress 26.2 23 0.0008 27.8 1.3 22 78-99 47-68 (86)
318 2ent_A Krueppel-like factor 15 25.4 30 0.001 24.0 1.7 23 78-100 12-36 (48)
319 2ee8_A Protein ODD-skipped-rel 25.3 26 0.0009 28.8 1.6 23 77-99 72-94 (106)
320 2yt9_A Zinc finger-containing 25.1 21 0.00071 28.7 0.9 24 77-100 6-29 (95)
321 2dmi_A Teashirt homolog 3; zin 24.9 24 0.00082 29.6 1.3 25 77-101 79-103 (115)
322 2gqj_A Zinc finger protein KIA 24.8 25 0.00086 29.1 1.3 24 77-100 23-47 (98)
323 2ee8_A Protein ODD-skipped-rel 24.6 37 0.0013 27.9 2.4 23 78-100 45-67 (106)
324 1llm_C Chimera of ZIF23-GCN4; 24.5 23 0.0008 28.3 1.0 23 78-100 3-25 (88)
325 2ej4_A Zinc finger protein ZIC 24.4 26 0.00088 28.2 1.3 22 79-100 63-84 (95)
326 1x6h_A Transcriptional repress 24.3 26 0.00089 27.5 1.3 23 78-100 15-37 (86)
327 2od1_A Protein CBFA2T1; zinc f 23.2 63 0.0021 25.3 3.3 31 629-664 12-46 (60)
328 1wir_A Protein arginine N-meth 22.6 31 0.001 31.4 1.5 47 78-126 15-61 (121)
329 3n71_A Histone lysine methyltr 22.4 35 0.0012 37.4 2.3 33 630-662 49-82 (490)
330 1a1h_A QGSR zinc finger peptid 22.2 31 0.001 27.3 1.3 23 77-99 33-55 (90)
331 2dlq_A GLI-kruppel family memb 22.2 37 0.0012 28.5 1.9 23 77-99 6-28 (124)
332 3qww_A SET and MYND domain-con 22.0 33 0.0011 37.1 1.9 33 630-662 49-82 (433)
333 2ctd_A Zinc finger protein 512 21.9 39 0.0013 28.3 2.0 20 78-97 62-81 (96)
334 1llm_C Chimera of ZIF23-GCN4; 21.7 31 0.0011 27.6 1.3 23 78-100 31-53 (88)
335 2dlq_A GLI-kruppel family memb 21.6 31 0.0011 28.9 1.3 22 78-99 94-115 (124)
336 3sp4_A Aprataxin-like protein; 21.6 32 0.0011 34.0 1.5 30 76-105 167-197 (204)
337 1wjp_A Zinc finger protein 295 21.0 32 0.0011 28.5 1.2 22 78-99 69-90 (107)
338 1x4w_A Hypothetical protein FL 20.8 43 0.0015 27.6 1.9 28 628-656 13-44 (67)
339 2ctd_A Zinc finger protein 512 20.7 36 0.0012 28.5 1.5 24 77-100 33-57 (96)
No 1
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.05 E-value=1.6e-10 Score=97.36 Aligned_cols=62 Identities=32% Similarity=0.378 Sum_probs=55.6
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHc
Q 005932 429 ESEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMAS 490 (669)
Q Consensus 429 ~~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~ 490 (669)
..+|..|+||||+|+..|+.++|++||+.|+|++.+|..|+||+++|...+..++++.+...
T Consensus 29 n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 29 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90 (93)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 34677899999999999999999999999999999999999999999988888888876643
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=98.92 E-value=5.9e-10 Score=105.97 Aligned_cols=59 Identities=29% Similarity=0.347 Sum_probs=42.2
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
+|..|+||||+||..|+.++|++||+.||||+.+|..|+||+++|...+..++++.+..
T Consensus 99 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 157 (169)
T 4gpm_A 99 KDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEK 157 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 45667777777777777777777777777777777777777777776666666665543
No 3
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=98.92 E-value=7.1e-10 Score=93.28 Aligned_cols=59 Identities=34% Similarity=0.399 Sum_probs=52.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 434 GITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 434 ~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
+|+||||+|+..|+.++|++||+.|+|++.+|..|.||+|+|+..+..++++.+...+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 59 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 58999999999999999999999999999999999999999998888899987776543
No 4
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=98.90 E-value=7.1e-10 Score=97.61 Aligned_cols=60 Identities=22% Similarity=0.204 Sum_probs=40.1
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHc
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMAS 490 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~ 490 (669)
.+..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+|+|+..+..++++.+...
T Consensus 36 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 95 (123)
T 3aaa_C 36 TLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSK 95 (123)
T ss_dssp CCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 445667777777777777777777777777777777777777777666666666655543
No 5
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=98.89 E-value=1.1e-09 Score=104.08 Aligned_cols=64 Identities=27% Similarity=0.379 Sum_probs=58.2
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 429 ESEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 429 ~~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..+|..|+||||+|+..|+.++|++||+.||||+.+|..|+||+++|+..+..++++.+...+.
T Consensus 64 ~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga 127 (169)
T 4gpm_A 64 NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 127 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred hhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 3467889999999999999999999999999999999999999999999889999998876543
No 6
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=98.87 E-value=1.5e-09 Score=95.51 Aligned_cols=56 Identities=20% Similarity=0.243 Sum_probs=51.9
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHH
Q 005932 429 ESEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTF 484 (669)
Q Consensus 429 ~~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~F 484 (669)
..+|..|+||||+|+..|+.++|++||+.|+|++++|..|+||+++|...++++++
T Consensus 67 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ll 122 (123)
T 3aaa_C 67 NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALL 122 (123)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHHH
T ss_pred CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHHh
Confidence 34678999999999999999999999999999999999999999999988887776
No 7
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=98.81 E-value=2.7e-09 Score=93.03 Aligned_cols=56 Identities=25% Similarity=0.272 Sum_probs=45.4
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHH
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRR 486 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~ 486 (669)
.|..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.
T Consensus 53 ~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~ 108 (110)
T 2zgd_A 53 KDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEI 108 (110)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHHHH
Confidence 46678888888888888888888888888888888888888888887666666653
No 8
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=98.79 E-value=2.7e-09 Score=95.73 Aligned_cols=60 Identities=27% Similarity=0.329 Sum_probs=50.5
Q ss_pred cccCC-CCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 430 SEVTG-ITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 430 ~~~~~-g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
.++.. |+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+..
T Consensus 72 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~ 132 (136)
T 1d9s_A 72 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHA 132 (136)
T ss_dssp CCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHH
T ss_pred CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 35566 8999999999999999999999999999999999999999987777777776653
No 9
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=98.78 E-value=4.5e-09 Score=93.96 Aligned_cols=55 Identities=18% Similarity=0.175 Sum_probs=33.4
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHH
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFR 485 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr 485 (669)
.|..|.||||+|+..|+.++|++||+.|+|++++|..|.||+++|...+..+++.
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~ 126 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLL 126 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHS
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHh
Confidence 3445566666666666666666666666666666666666666666555555544
No 10
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=98.78 E-value=3.9e-09 Score=107.74 Aligned_cols=60 Identities=20% Similarity=0.158 Sum_probs=54.7
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
.+|..|+||||+||..|+.++|++||+.||||+++|..|+||+++|...+..++++.+..
T Consensus 200 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 259 (278)
T 1dcq_A 200 KQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQ 259 (278)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 467789999999999999999999999999999999999999999998888888876654
No 11
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=98.77 E-value=3e-09 Score=92.31 Aligned_cols=63 Identities=27% Similarity=0.303 Sum_probs=56.7
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..|..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+...+.
T Consensus 37 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga 99 (115)
T 2l6b_A 37 ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGA 99 (115)
T ss_dssp CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSS
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 356789999999999999999999999999999999999999999998888899988775544
No 12
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=98.75 E-value=5.7e-09 Score=93.59 Aligned_cols=58 Identities=24% Similarity=0.073 Sum_probs=33.0
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 432 VTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 432 ~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
|..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+|+|+..+..++++.+..
T Consensus 44 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 101 (136)
T 2jab_A 44 DEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLK 101 (136)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4455555555555555555555555555555555555555555555555555554443
No 13
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=98.74 E-value=7.7e-09 Score=89.41 Aligned_cols=60 Identities=33% Similarity=0.380 Sum_probs=45.4
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHc
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMAS 490 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~ 490 (669)
.+..|.||||+|+..|+.++|++|++.|+|++.+|..|.||+++|...+..++++.+...
T Consensus 64 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 64 KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123 (126)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 456778888888888888888888888888888888888888888777777777765543
No 14
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=98.74 E-value=4.9e-09 Score=106.19 Aligned_cols=56 Identities=21% Similarity=0.166 Sum_probs=48.7
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeeccccc-HHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKE-VRNTFR 485 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~-~Rd~Fr 485 (669)
.++..|+||||+||..|+.+||++||+.||||+++|.+|+||+++|...+ +.++++
T Consensus 180 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~ 236 (269)
T 4b93_B 180 ASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQ 236 (269)
T ss_dssp CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTT
T ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHH
Confidence 46778999999999999999999999999999999999999999998543 344443
No 15
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=98.72 E-value=8.2e-09 Score=92.24 Aligned_cols=63 Identities=16% Similarity=0.077 Sum_probs=56.9
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..+..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+|+|...+..++++.+...+.
T Consensus 38 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 100 (137)
T 3c5r_A 38 VKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGA 100 (137)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 456789999999999999999999999999999999999999999998888889887765543
No 16
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=98.72 E-value=1.9e-08 Score=93.87 Aligned_cols=71 Identities=17% Similarity=0.052 Sum_probs=56.7
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHc--CCCccccccC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMAS--NPDKWDWHAA 500 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~--~~d~~Dw~~A 500 (669)
..|..|.||||+|+..|+.++|++||+.|+|++++|..|.||+++|.......+++.+... +++..+|...
T Consensus 100 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~~ 172 (179)
T 3f6q_A 100 AVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKDT 172 (179)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCCT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCcccc
Confidence 3567899999999999999999999999999999999999999999887777777766554 3344444433
No 17
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=98.71 E-value=9.2e-09 Score=92.19 Aligned_cols=60 Identities=20% Similarity=0.111 Sum_probs=54.7
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
..|..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+..
T Consensus 75 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 75 AVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 467789999999999999999999999999999999999999999998888888876653
No 18
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=98.70 E-value=1.2e-08 Score=100.35 Aligned_cols=61 Identities=30% Similarity=0.229 Sum_probs=56.1
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCCC
Q 005932 433 TGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNPD 493 (669)
Q Consensus 433 ~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~d 493 (669)
..|+||||+|+..|+.++|++||+.||||+++|..|+||+++|...+..++++.+...+.+
T Consensus 190 ~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 250 (282)
T 1oy3_D 190 TCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250 (282)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCC
Confidence 3599999999999999999999999999999999999999999999999999988766543
No 19
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=98.69 E-value=1.1e-08 Score=93.12 Aligned_cols=62 Identities=26% Similarity=0.193 Sum_probs=53.1
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
..+..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+...+
T Consensus 62 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 123 (153)
T 1awc_B 62 ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123 (153)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 35677899999999999999999999999999999999999999998888888888776544
No 20
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=98.69 E-value=6.7e-09 Score=95.27 Aligned_cols=62 Identities=26% Similarity=0.310 Sum_probs=56.0
Q ss_pred cccCCCCc-HHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 430 SEVTGITT-SLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 430 ~~~~~g~T-pLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
.++..|+| |||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+...+
T Consensus 72 ~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g 134 (156)
T 1bi7_B 72 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAA 134 (156)
T ss_dssp CCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC
T ss_pred CcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcC
Confidence 45678998 999999999999999999999999999999999999999888888988776443
No 21
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=98.68 E-value=1.1e-08 Score=92.71 Aligned_cols=60 Identities=25% Similarity=0.321 Sum_probs=54.4
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
..|..|.||||+|+..|+.++|++||+.|+|++.+|..|.||+++|+..+..++++.+..
T Consensus 63 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 122 (156)
T 1bd8_A 63 VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA 122 (156)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHh
Confidence 456789999999999999999999999999999999999999999998888888887664
No 22
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=98.68 E-value=1.9e-08 Score=97.64 Aligned_cols=64 Identities=20% Similarity=0.159 Sum_probs=57.6
Q ss_pred ccC-CCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCCCc
Q 005932 431 EVT-GITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNPDK 494 (669)
Q Consensus 431 ~~~-~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~d~ 494 (669)
.+. .|+||||+|+..|+.++|++||+.|||++++|..|.||+++|...+..++++.+...+.+.
T Consensus 146 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 146 QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhh
Confidence 444 8999999999999999999999999999999999999999999999999999887655443
No 23
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=98.68 E-value=1.2e-08 Score=88.36 Aligned_cols=62 Identities=27% Similarity=0.400 Sum_probs=56.8
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
+|.+|.||||+|+..|+.++|++||+.|+|++.+|..|.||+++|+..+..++++.+...+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 66 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 57899999999999999999999999999999999999999999998888899987765443
No 24
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=98.68 E-value=1.2e-08 Score=98.15 Aligned_cols=59 Identities=24% Similarity=0.370 Sum_probs=49.9
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFM 488 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~ 488 (669)
..+..|+||||+|+..|+.++|++||+.||||+++|..|+||+++|...+..++++.+.
T Consensus 178 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~ 236 (241)
T 1k1a_A 178 AQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKA 236 (241)
T ss_dssp CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC--
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhc
Confidence 35677899999999999999999999999999999999999999999888888887544
No 25
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=98.68 E-value=1.4e-08 Score=92.41 Aligned_cols=64 Identities=20% Similarity=0.243 Sum_probs=56.0
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNPD 493 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~d 493 (669)
..+..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|+..+..++++.+...+.+
T Consensus 65 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 65 LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128 (162)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC
Confidence 3567899999999999999999999999999999999999999999988888888877765554
No 26
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=98.67 E-value=8e-09 Score=99.76 Aligned_cols=60 Identities=18% Similarity=0.205 Sum_probs=52.8
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
.+|..|+||||+|+..|+.+||++||+.|||++++|..|+||+++|...+..++++.+..
T Consensus 135 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~ 194 (222)
T 3ehr_A 135 QQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQG 194 (222)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhc
Confidence 357789999999999999999999999999999999999999999999999999887654
No 27
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=98.67 E-value=1.6e-08 Score=92.84 Aligned_cols=61 Identities=18% Similarity=0.111 Sum_probs=46.5
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHc
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMAS 490 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~ 490 (669)
..+..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+...
T Consensus 70 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 130 (165)
T 3twr_A 70 AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH 130 (165)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 3456778888888888888888888888888888888888888888777777777766544
No 28
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=98.67 E-value=1.1e-08 Score=100.78 Aligned_cols=64 Identities=20% Similarity=0.182 Sum_probs=57.9
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 429 ESEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 429 ~~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
...|..|+||||+||..|+.+||++||+.|+|++.+|..|.||+|+|+..+..++++.+...+.
T Consensus 64 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 127 (239)
T 1ycs_B 64 SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGA 127 (239)
T ss_dssp CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 3457889999999999999999999999999999999999999999998888999998776543
No 29
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=98.67 E-value=2.2e-08 Score=91.84 Aligned_cols=58 Identities=28% Similarity=0.268 Sum_probs=51.7
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFM 488 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~ 488 (669)
..|..|+||||+|+..|+.++|++||+.|+||+.+|..|+||+++|.. +..++++.+.
T Consensus 103 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~ 160 (165)
T 3twr_A 103 VADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLR 160 (165)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHh
Confidence 356789999999999999999999999999999999999999999987 4557777554
No 30
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=98.67 E-value=1.4e-08 Score=95.69 Aligned_cols=63 Identities=19% Similarity=0.083 Sum_probs=56.5
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCcc-CCCCcceeecccccHHHHHHHHHHcC
Q 005932 429 ESEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKD-ENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 429 ~~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn-~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
...|..|+||||+|+..|+.++|++||+.|+|++.+| ..|.||+|+|+..+..++++.+...+
T Consensus 70 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 133 (183)
T 3deo_A 70 DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG 133 (183)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcC
Confidence 3467789999999999999999999999999999998 89999999999888888888776554
No 31
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=98.67 E-value=1.3e-08 Score=92.62 Aligned_cols=58 Identities=16% Similarity=0.127 Sum_probs=53.0
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRF 487 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~ 487 (669)
..|..|.||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+
T Consensus 95 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 95 AKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 4577899999999999999999999999999999999999999999988877777643
No 32
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=98.67 E-value=2.7e-08 Score=89.11 Aligned_cols=62 Identities=21% Similarity=0.210 Sum_probs=52.4
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..+..|.||||+|+..|+.++|++||+.|+|++.+|..|+||+++|+. +..++++.+...+.
T Consensus 7 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~ 68 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGA 68 (136)
T ss_dssp CCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTC
T ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCC
Confidence 356788999999999999999999999999999999999999999988 88888887765543
No 33
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=98.66 E-value=9.9e-09 Score=89.38 Aligned_cols=64 Identities=25% Similarity=0.343 Sum_probs=55.7
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 429 ESEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 429 ~~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
...+.+|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|+..+..++++.+...+.
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga 81 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA 81 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4578899999999999999999999999999999999999999999998888899887775543
No 34
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=98.64 E-value=2.5e-08 Score=95.41 Aligned_cols=56 Identities=18% Similarity=0.145 Sum_probs=48.5
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHH-HCCCCcCCccCCCCcceeecccccHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELL-EQGLDPCIKDENGRTPYMLASEKEVRNTFR 485 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LL-e~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr 485 (669)
..|..|+||||+|+..|+.++|++|| +.||||+++|..|+||+++|...++.++|.
T Consensus 169 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~ 225 (228)
T 2dzn_A 169 WQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKFFL 225 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTTHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHHHHHHHH
Confidence 35678999999999999999999999 789999999999999999998888777765
No 35
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=98.63 E-value=1.9e-08 Score=92.89 Aligned_cols=58 Identities=24% Similarity=0.150 Sum_probs=42.4
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHH
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFM 488 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~ 488 (669)
.+..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+.
T Consensus 98 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 155 (172)
T 3v30_A 98 YDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIE 155 (172)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 4566777777777777777777777777777777777777777777666666666544
No 36
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=98.63 E-value=1.8e-08 Score=104.20 Aligned_cols=50 Identities=26% Similarity=0.295 Sum_probs=46.2
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccc
Q 005932 429 ESEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEK 478 (669)
Q Consensus 429 ~~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk 478 (669)
..+|..|+||||+||..|+.+||++||+.||||+++|..|+||+|+|+..
T Consensus 277 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 277 NAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp TCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC-
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence 44678999999999999999999999999999999999999999999854
No 37
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=98.63 E-value=2.4e-08 Score=93.18 Aligned_cols=63 Identities=24% Similarity=0.182 Sum_probs=56.3
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..+..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+...+.
T Consensus 67 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 129 (179)
T 3f6q_A 67 VMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGA 129 (179)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 356789999999999999999999999999999999999999999998888888887765543
No 38
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=98.62 E-value=1.8e-08 Score=103.98 Aligned_cols=60 Identities=20% Similarity=0.107 Sum_probs=54.0
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
.+|..|+||||+|+..|+.++|++||+.||||+++|..|+||+++|...+..++++.+..
T Consensus 221 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~ 280 (301)
T 2b0o_E 221 AKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQ 280 (301)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 357789999999999999999999999999999999999999999998887888776654
No 39
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=98.62 E-value=2.1e-08 Score=91.33 Aligned_cols=62 Identities=19% Similarity=0.086 Sum_probs=55.9
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCc-CCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDP-CIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP-~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
..|..|+||||+|+..|+.++|++||+.|+|+ +.+|..|.||+++|...+..++++.+...+
T Consensus 98 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 98 IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 45778999999999999999999999999995 999999999999999888889988776544
No 40
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=98.62 E-value=1.6e-08 Score=102.32 Aligned_cols=62 Identities=16% Similarity=0.071 Sum_probs=57.2
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
..|..|+||||+||..|+.++|++||+.||||+.+|..|.||+|+|+..+..++++.+...+
T Consensus 147 ~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G 208 (269)
T 4b93_B 147 KKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHG 208 (269)
T ss_dssp CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCC
Confidence 46788999999999999999999999999999999999999999999888889998877654
No 41
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=98.62 E-value=2.3e-08 Score=91.90 Aligned_cols=57 Identities=26% Similarity=0.201 Sum_probs=36.3
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHH
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRF 487 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~ 487 (669)
.|..|+||||+|+..|+.++|++||+.|+||+++|..|.||+++|...+..++++.+
T Consensus 98 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 154 (167)
T 3v31_A 98 YDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVI 154 (167)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 345566666666666666666666666666666666666666666655555555543
No 42
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=98.61 E-value=2.3e-08 Score=92.66 Aligned_cols=59 Identities=25% Similarity=0.155 Sum_probs=35.1
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
.+..|.||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+..
T Consensus 76 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 134 (169)
T 2y1l_E 76 VDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLK 134 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 34456666666666666666666666666666666666666666665555555555443
No 43
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=98.61 E-value=1.6e-08 Score=110.99 Aligned_cols=62 Identities=19% Similarity=0.113 Sum_probs=56.9
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
.+|..|+||||+||..|+.++|++||++|||++++|..|+||+|+|...+..++++.+...+
T Consensus 202 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g 263 (497)
T 3lvq_E 202 AKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ 263 (497)
T ss_dssp CCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 35778999999999999999999999999999999999999999999888889988776544
No 44
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=98.60 E-value=2.7e-08 Score=98.24 Aligned_cols=63 Identities=19% Similarity=0.100 Sum_probs=57.2
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..|..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|+..+..++++.+...+.
T Consensus 49 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga 111 (229)
T 2vge_A 49 QPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGA 111 (229)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 357789999999999999999999999999999999999999999998888999998775543
No 45
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=98.60 E-value=2.9e-08 Score=98.47 Aligned_cols=64 Identities=19% Similarity=0.083 Sum_probs=56.6
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCcc-CCCCcceeecccccHHHHHHHHHHcCC
Q 005932 429 ESEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKD-ENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 429 ~~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn-~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
...|..|+||||+||..|+.++|++||+.|+|++.+| ..|.||+|+|+..+..++++.+...+.
T Consensus 71 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 135 (244)
T 3ui2_A 71 DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGA 135 (244)
T ss_dssp TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 3467789999999999999999999999999999998 889999999998888899887765543
No 46
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=98.60 E-value=5.3e-08 Score=97.24 Aligned_cols=47 Identities=26% Similarity=0.160 Sum_probs=32.8
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeeccc
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASE 477 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~d 477 (669)
.|..|+||||+|+..|+.++|++||+.||||+++|..|+||+++|..
T Consensus 228 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 228 KDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 45566777777777777777777777777777777777777777754
No 47
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=98.59 E-value=2.8e-08 Score=93.65 Aligned_cols=57 Identities=19% Similarity=0.193 Sum_probs=27.5
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHH
Q 005932 432 VTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFM 488 (669)
Q Consensus 432 ~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~ 488 (669)
+..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|+..+..++++.+.
T Consensus 98 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (192)
T 2rfm_A 98 DFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154 (192)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 334445555555555555555555555555555555555555544444444444433
No 48
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=98.58 E-value=2.9e-08 Score=97.58 Aligned_cols=63 Identities=22% Similarity=0.192 Sum_probs=57.2
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..+..|+||||+||..|+.++|++||+.|+|++.+|..|.||+++|+..+..++++.+...+.
T Consensus 40 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 102 (282)
T 1oy3_D 40 LQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP 102 (282)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCC
Confidence 456789999999999999999999999999999999999999999999888999987765443
No 49
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=98.58 E-value=3e-08 Score=91.54 Aligned_cols=57 Identities=25% Similarity=0.140 Sum_probs=32.1
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHH
Q 005932 432 VTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFM 488 (669)
Q Consensus 432 ~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~ 488 (669)
+..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|+..+..++++.+.
T Consensus 33 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (172)
T 3v30_A 33 DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLL 89 (172)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHH
Confidence 445555555555555555555555555555555555555555555555555555444
No 50
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=98.58 E-value=3.5e-08 Score=92.93 Aligned_cols=59 Identities=24% Similarity=0.150 Sum_probs=46.4
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFM 488 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~ 488 (669)
..+..|.||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+.
T Consensus 129 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 129 DRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 35677888888888888888888888888888888888888888888776666666554
No 51
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=98.58 E-value=3.9e-08 Score=94.74 Aligned_cols=64 Identities=17% Similarity=0.065 Sum_probs=54.8
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHH----HHHHHcCC
Q 005932 429 ESEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTF----RRFMASNP 492 (669)
Q Consensus 429 ~~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~F----r~~~~~~~ 492 (669)
...+..|.||||+|+..|+.++|++||+.|+|++.+|..|.||+|+|...+..+++ +.+...+.
T Consensus 115 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~ 182 (232)
T 2rfa_A 115 HNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDG 182 (232)
T ss_dssp TCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCC
Confidence 34567899999999999999999999999999999999999999999977766665 55554443
No 52
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=98.58 E-value=3e-08 Score=95.29 Aligned_cols=59 Identities=22% Similarity=0.117 Sum_probs=46.8
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFM 488 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~ 488 (669)
.+|..|.||||+|+..|+.++|++||+.|+||+++|..|+||+++|......++.+.+.
T Consensus 167 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~ 225 (231)
T 3aji_A 167 IQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAE 225 (231)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHc
Confidence 35667888888888888888888888888888888888888888887666666655443
No 53
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=98.58 E-value=4.8e-08 Score=93.97 Aligned_cols=60 Identities=15% Similarity=0.063 Sum_probs=51.6
Q ss_pred cccCCCCcHHHHHHHcCC------HHHHHHHHHCCCCcCCccCCCC-cceeeccc-----ccHHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSI------AQKVLELLEQGLDPCIKDENGR-TPYMLASE-----KEVRNTFRRFMA 489 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~------~~iV~~LLe~GADP~ikn~~Gk-TP~~lA~d-----k~~Rd~Fr~~~~ 489 (669)
.+|..|+||||+|+..|+ .+||++||++|||++++|..|+ ||+|+|.. .+...+++.+..
T Consensus 70 ~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~ 141 (186)
T 3t8k_A 70 SRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS 141 (186)
T ss_dssp CCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT
T ss_pred CCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHH
Confidence 457889999999999997 5789999999999999999999 99999986 345567776665
No 54
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=98.57 E-value=3.4e-08 Score=99.71 Aligned_cols=59 Identities=24% Similarity=0.223 Sum_probs=50.8
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
.+..|+||||+|+..|+.++|++||+.||||+++|..|.||+++|+..+..++++.+..
T Consensus 179 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 237 (276)
T 4hbd_A 179 ASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLA 237 (276)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 45678899999999999999999999999999999999999999988888888887765
No 55
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=98.57 E-value=4.6e-08 Score=84.45 Aligned_cols=63 Identities=32% Similarity=0.371 Sum_probs=57.0
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..+..|.||||+|+..|+.++|++|++.|+|++.+|..|.||+++|...+..++++.+...+.
T Consensus 30 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~ 92 (126)
T 1n0r_A 30 AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (126)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCC
Confidence 356789999999999999999999999999999999999999999998888899988776543
No 56
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=98.57 E-value=4.6e-08 Score=90.61 Aligned_cols=58 Identities=22% Similarity=0.191 Sum_probs=41.6
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHH
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFM 488 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~ 488 (669)
.|..|.||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+.
T Consensus 109 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 166 (169)
T 2y1l_E 109 NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 4566777777777777777777777777777777777777777777666666666444
No 57
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=98.56 E-value=3.4e-08 Score=95.32 Aligned_cols=62 Identities=18% Similarity=0.103 Sum_probs=56.6
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHC-CCCcCCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQ-GLDPCIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~-GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
..|..|+||||+||..|+.++|++||+. |+|++.+|..|.||+++|+..+..++++.+...+
T Consensus 101 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 163 (222)
T 3ehr_A 101 GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKG 163 (222)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4567899999999999999999999998 9999999999999999999888889988776554
No 58
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=98.56 E-value=4.8e-08 Score=89.73 Aligned_cols=58 Identities=22% Similarity=0.178 Sum_probs=33.3
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 432 VTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 432 ~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
+..|+||||+|+..|+.++|++||+.|+||+..|..|.||+++|+..+..++++.+..
T Consensus 33 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 90 (167)
T 3v31_A 33 DEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLD 90 (167)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 4455566666666666666666665566666555556666665555555555554443
No 59
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=98.55 E-value=5.9e-08 Score=91.24 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=56.1
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHc
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMAS 490 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~ 490 (669)
..+..|+||||+|+..|+.++|++||+.|+||+.+|..|.||+++|...+..++++.+...
T Consensus 34 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 94 (201)
T 3hra_A 34 EVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKH 94 (201)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 3567899999999999999999999999999999999999999999988889999887744
No 60
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=98.55 E-value=3.4e-08 Score=97.48 Aligned_cols=58 Identities=22% Similarity=0.171 Sum_probs=46.6
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHH
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFM 488 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~ 488 (669)
.+..|.||||+|+..|+.++|++||+.|||++++|..|+||+++|...+..+++..+.
T Consensus 186 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~ 243 (253)
T 1yyh_A 186 QNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLD 243 (253)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 5667888888888888888888888888888888888888888888777777777654
No 61
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=98.55 E-value=4.4e-08 Score=92.10 Aligned_cols=58 Identities=29% Similarity=0.240 Sum_probs=44.7
Q ss_pred ccCCCCcHHHHHHHcCC-----HHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHH
Q 005932 431 EVTGITTSLHEAAQSSI-----AQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFM 488 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~-----~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~ 488 (669)
.+..|+||||+|+..|. .++|++||+.|+||+++|..|+||+++|...+..++++.+.
T Consensus 136 ~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 198 (201)
T 3hra_A 136 QNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILA 198 (201)
T ss_dssp CCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHH
Confidence 45677888888887776 78888888888888888888888888887777777776554
No 62
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=98.54 E-value=4.9e-08 Score=96.27 Aligned_cols=63 Identities=19% Similarity=0.210 Sum_probs=57.4
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..+..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+...+.
T Consensus 152 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga 214 (253)
T 1yyh_A 152 AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 214 (253)
T ss_dssp CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 456789999999999999999999999999999999999999999998888899988776543
No 63
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=98.54 E-value=5.5e-08 Score=97.10 Aligned_cols=61 Identities=20% Similarity=0.173 Sum_probs=52.5
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
.+..|.||||+|+..|+.++|++||+.|+|++..|..|.||+++|+..+..++++.+...+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g 129 (299)
T 1s70_B 69 ANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQG 129 (299)
T ss_dssp BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Confidence 5677899999999999999999999999999999999999999998888888888776543
No 64
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=98.53 E-value=5.5e-08 Score=98.26 Aligned_cols=63 Identities=21% Similarity=0.158 Sum_probs=57.0
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..+..|+||||+|+..|+.++|++||+.|+|++.+|..|+||+++|...+..++++.+...+.
T Consensus 242 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 304 (351)
T 3utm_A 242 EKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGS 304 (351)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 456789999999999999999999999999999999999999999998888999998776543
No 65
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=98.52 E-value=4.3e-08 Score=98.96 Aligned_cols=60 Identities=18% Similarity=0.149 Sum_probs=55.4
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHH-CCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLE-QGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe-~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
.+|..|+||||+|+..|+.++|++||+ .|+|++++|..|+||+++|...+..++++.+..
T Consensus 211 ~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 271 (276)
T 4hbd_A 211 VQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYS 271 (276)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 457899999999999999999999999 899999999999999999998888888887654
No 66
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=98.52 E-value=6.8e-08 Score=92.31 Aligned_cols=61 Identities=21% Similarity=0.145 Sum_probs=49.9
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHc
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMAS 490 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~ 490 (669)
..+..|.||||+|+..|+.++|++||+.|+||+++|..|.||+++|...+..++++.+...
T Consensus 153 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~ 213 (223)
T 2f8y_A 153 MQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEY 213 (223)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHc
Confidence 3566788888888888888888888888888888888888888888888888888766643
No 67
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=98.52 E-value=5.3e-08 Score=102.37 Aligned_cols=63 Identities=24% Similarity=0.209 Sum_probs=53.4
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
.+|..|+||||+|+..|+.+||++||+.|||++++|..|+||+++|...+..++++.+....+
T Consensus 308 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 308 KQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 456789999999999999999999999999999999999999999998888888887764443
No 68
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=98.51 E-value=5.4e-08 Score=88.23 Aligned_cols=58 Identities=21% Similarity=0.142 Sum_probs=53.3
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFM 488 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~ 488 (669)
.+|..|+||||+|+..|+.++|++||+. +|++.+|..|.||+++|...+..++++.+.
T Consensus 96 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 96 VPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQ 153 (156)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred CcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 4567899999999999999999999999 999999999999999999888888888665
No 69
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=98.50 E-value=6.1e-08 Score=98.85 Aligned_cols=64 Identities=14% Similarity=0.092 Sum_probs=57.5
Q ss_pred ccccCCCCcHHHHHHHc---CCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 429 ESEVTGITTSLHEAAQS---SIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 429 ~~~~~~g~TpLH~AA~~---G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
...+..|+||||+||.. |+.++|++||+.|||++.+|..|.||+|+|+..+..++++.+...+.
T Consensus 163 ~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 229 (278)
T 1dcq_A 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKA 229 (278)
T ss_dssp SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 34567899999999999 89999999999999999999999999999998888899988776543
No 70
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=98.50 E-value=8.2e-08 Score=91.74 Aligned_cols=63 Identities=19% Similarity=0.210 Sum_probs=57.0
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..+..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+...+.
T Consensus 120 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 182 (223)
T 2f8y_A 120 AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 182 (223)
T ss_dssp CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC
Confidence 356789999999999999999999999999999999999999999998888899987776543
No 71
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=98.50 E-value=6.5e-08 Score=100.02 Aligned_cols=50 Identities=18% Similarity=0.083 Sum_probs=46.9
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccH
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEV 480 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~ 480 (669)
.|..|+||||+||..|+.++|++||+.||||+.+|..|+||+|+|+..+.
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcc
Confidence 57899999999999999999999999999999999999999999997544
No 72
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=98.50 E-value=8.3e-08 Score=96.94 Aligned_cols=60 Identities=20% Similarity=0.092 Sum_probs=40.6
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHc
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMAS 490 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~ 490 (669)
.+..|+||||+|+..|+.+||++||+.|+|++..|..|.||+++|...+..++++.+...
T Consensus 87 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 146 (351)
T 3utm_A 87 KDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSH 146 (351)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 455667777777777777777777777777777777777777777666666666655543
No 73
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=98.50 E-value=1.2e-07 Score=86.94 Aligned_cols=60 Identities=20% Similarity=0.238 Sum_probs=47.3
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
.+..|.||||+|+..|+.++|++||+.|+|++.+|..|.||+++|. .+..++++.+...+
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g 67 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG 67 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC
Confidence 4567888888888888888888888888888888888888888886 66777777666443
No 74
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=98.49 E-value=6e-08 Score=95.30 Aligned_cols=60 Identities=22% Similarity=0.156 Sum_probs=55.3
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCcc--------------CCCCcceeecccccHHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKD--------------ENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn--------------~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
..|..|+||||+|+..|+.++|++||+.|+|++..| ..|.||+|+|+..+..++++.+..
T Consensus 88 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 161 (260)
T 3jxi_A 88 DVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE 161 (260)
T ss_dssp CSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 355689999999999999999999999999999999 689999999999888999998876
No 75
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=98.49 E-value=4.2e-08 Score=101.55 Aligned_cols=62 Identities=15% Similarity=0.208 Sum_probs=56.6
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHc
Q 005932 429 ESEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMAS 490 (669)
Q Consensus 429 ~~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~ 490 (669)
...+..|+||||+||..|+.++|++||+.|||++++|..|+||+++|+..+..++++.+...
T Consensus 205 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 205 DYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK 266 (364)
T ss_dssp TCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHc
Confidence 34677899999999999999999999999999999999999999999988888888877654
No 76
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=98.48 E-value=1.3e-07 Score=91.25 Aligned_cols=52 Identities=25% Similarity=0.198 Sum_probs=41.9
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHH
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRN 482 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd 482 (669)
.|..|.||||+|+..|+.++|++||+.|+|++++|..|+||+++|...+...
T Consensus 173 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~ 224 (237)
T 3b7b_A 173 VNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVW 224 (237)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHH
T ss_pred cCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHH
Confidence 4667888888888888888888888888888888888888888888655443
No 77
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=98.48 E-value=1.1e-07 Score=93.40 Aligned_cols=60 Identities=23% Similarity=0.248 Sum_probs=55.5
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCC-------------CCcceeecccccHHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDEN-------------GRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~-------------GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
..|..|.||||+|+..|+.++|++||+.|+|++.+|.. |.||+|+|+..+..++++.+..
T Consensus 85 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 157 (256)
T 2etb_A 85 DEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE 157 (256)
T ss_dssp STTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred cccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 35678999999999999999999999999999999987 9999999998888999998876
No 78
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=98.47 E-value=5.9e-08 Score=91.41 Aligned_cols=45 Identities=40% Similarity=0.385 Sum_probs=43.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeeccc
Q 005932 433 TGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASE 477 (669)
Q Consensus 433 ~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~d 477 (669)
..|+||||+|+..|+.++|++||+.|+|++++|..|.||+++|..
T Consensus 108 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 108 RGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 152 (183)
T ss_dssp SSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHH
Confidence 789999999999999999999999999999999999999999974
No 79
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=98.46 E-value=9.2e-08 Score=92.79 Aligned_cols=63 Identities=22% Similarity=0.196 Sum_probs=57.1
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccC-CCCcceeecccccHHHHHHHHHHcC
Q 005932 429 ESEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDE-NGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 429 ~~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~-~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
...+..|+||||+|+..|+.++|++||+.|+|++.+|. .|.||+|+|+..+..++++.+...+
T Consensus 111 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 174 (236)
T 1ikn_D 111 KATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG 174 (236)
T ss_dssp GCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred hccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 44677899999999999999999999999999999998 9999999999888889998877543
No 80
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=98.46 E-value=1.2e-07 Score=94.26 Aligned_cols=60 Identities=22% Similarity=0.163 Sum_probs=55.7
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccC--------------CCCcceeecccccHHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDE--------------NGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~--------------~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
..|..|+||||+|+..|+.++|++||+.|+|++.+|. .|.||+|+|+..+..++++.+..
T Consensus 96 ~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 169 (273)
T 2pnn_A 96 DSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQ 169 (273)
T ss_dssp STTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHH
T ss_pred cccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 3567899999999999999999999999999999997 79999999998888999998876
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=98.46 E-value=9e-08 Score=92.09 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=48.9
Q ss_pred CCCCcHHHHHHHcCCH----HHHHHHHHCCCCcCCccCCCCcceeecccccH------HHHHHHHHHcC
Q 005932 433 TGITTSLHEAAQSSIA----QKVLELLEQGLDPCIKDENGRTPYMLASEKEV------RNTFRRFMASN 491 (669)
Q Consensus 433 ~~g~TpLH~AA~~G~~----~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~------Rd~Fr~~~~~~ 491 (669)
..|+||||+|+..|+. +||++||+.||||+.+|..|+||+|+|...+. .++++.+...+
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~G 104 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKG 104 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCC
Confidence 5799999999999986 59999999999999999999999999885442 34566555443
No 82
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=98.45 E-value=1.1e-07 Score=94.36 Aligned_cols=63 Identities=17% Similarity=0.113 Sum_probs=49.2
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..|..|.||||+|+..|+.++|++||+.|+|++.+|..|.||+++|+..+..++++.+...+.
T Consensus 31 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (261)
T 2xai_A 31 IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGA 93 (261)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 355678888888888888888888888888888888888888888887777777776665443
No 83
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=98.45 E-value=1.2e-07 Score=91.14 Aligned_cols=60 Identities=18% Similarity=0.168 Sum_probs=55.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 433 TGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 433 ~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..|.||||+|+..|+.++|++||+.|+|++.+|..|.||+|+|...+..++++.+...+.
T Consensus 148 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 207 (241)
T 1k1a_A 148 KSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGA 207 (241)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence 679999999999999999999999999999999999999999998888999998776543
No 84
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=98.45 E-value=1.3e-07 Score=90.51 Aligned_cols=59 Identities=19% Similarity=0.096 Sum_probs=54.3
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCC-CCcCCccCCCCcceeecccccHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQG-LDPCIKDENGRTPYMLASEKEVRNTFRRFM 488 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~G-ADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~ 488 (669)
..+..|+||||+|+..|+.++|++||+.| +|++.+|..|.||+++|...+..++++.+.
T Consensus 135 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 135 IKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 45678999999999999999999999999 999999999999999999888888888776
No 85
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=98.44 E-value=2.2e-07 Score=91.65 Aligned_cols=60 Identities=17% Similarity=0.118 Sum_probs=53.9
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCcc-CCCCcceeec--ccccHHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKD-ENGRTPYMLA--SEKEVRNTFRRFMA 489 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn-~~GkTP~~lA--~dk~~Rd~Fr~~~~ 489 (669)
..|..|+||||+|+..|+.++|++||+.|+|++.+| ..|.||+++| ...+..++++.+..
T Consensus 82 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~ 144 (229)
T 2vge_A 82 SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLAD 144 (229)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHH
Confidence 457789999999999999999999999999999996 6999999999 88888888887654
No 86
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=98.44 E-value=1.4e-07 Score=92.29 Aligned_cols=62 Identities=21% Similarity=0.182 Sum_probs=56.1
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHH-CCCCcCCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLE-QGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe-~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
..+..|.||||+|+..|+.++|++||+ .|+|++.+|..|+||+++|...+..++++.+...+
T Consensus 214 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~G 276 (285)
T 1wdy_A 214 VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG 276 (285)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcC
Confidence 356789999999999999999999999 89999999999999999999888888988776554
No 87
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=98.44 E-value=1.3e-07 Score=93.83 Aligned_cols=44 Identities=39% Similarity=0.367 Sum_probs=42.6
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecc
Q 005932 433 TGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLAS 476 (669)
Q Consensus 433 ~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~ 476 (669)
..|+||||+|+..|+.++|++||++|||++++|..|.||+++|.
T Consensus 109 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 109 RGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAR 152 (244)
T ss_dssp SSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 67999999999999999999999999999999999999999997
No 88
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=98.44 E-value=1.4e-07 Score=90.53 Aligned_cols=63 Identities=24% Similarity=0.231 Sum_probs=57.2
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..+..|.||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+...+.
T Consensus 134 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 196 (231)
T 3aji_A 134 AKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGA 196 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Confidence 356789999999999999999999999999999999999999999998888899988776544
No 89
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.43 E-value=1.1e-07 Score=90.77 Aligned_cols=59 Identities=19% Similarity=0.171 Sum_probs=54.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 433 TGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 433 ~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
..|.||||+|+..|+.++|++||+.|+||+.+|..|+||+++|...+..++++.+....
T Consensus 175 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~ 233 (240)
T 3eu9_A 175 YHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEAR 233 (240)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhh
Confidence 37999999999999999999999999999999999999999999998899988776443
No 90
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=98.40 E-value=1.7e-07 Score=90.41 Aligned_cols=63 Identities=19% Similarity=0.161 Sum_probs=57.0
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..+..|.||||+|+..|+.++|++||+.|+|++.+|..|.||+++|...+..++++.+...+.
T Consensus 139 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 201 (237)
T 3b7b_A 139 IRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDS 201 (237)
T ss_dssp CCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCC
Confidence 356789999999999999999999999999999999999999999998888899987775543
No 91
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=98.40 E-value=1.8e-07 Score=91.92 Aligned_cols=58 Identities=19% Similarity=0.017 Sum_probs=49.6
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHH---CCCCcCCccCCCCcceeeccc--ccHHH-------HHHHHHH
Q 005932 432 VTGITTSLHEAAQSSIAQKVLELLE---QGLDPCIKDENGRTPYMLASE--KEVRN-------TFRRFMA 489 (669)
Q Consensus 432 ~~~g~TpLH~AA~~G~~~iV~~LLe---~GADP~ikn~~GkTP~~lA~d--k~~Rd-------~Fr~~~~ 489 (669)
+..|+||||+|+..|+.++|++||+ .|+|++.+|..|+||+|+|+. .+..+ +++.+..
T Consensus 133 ~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~ 202 (256)
T 2etb_A 133 FYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQ 202 (256)
T ss_dssp CCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHH
Confidence 3459999999999999999999999 999999999999999999985 44444 6665543
No 92
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=98.40 E-value=1.5e-07 Score=93.38 Aligned_cols=58 Identities=17% Similarity=0.137 Sum_probs=52.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 434 GITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 434 ~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
+|+||||+||..|+.++|++||+.|+|++.+|..|.||+++|+..+..++++.+...+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 59 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHG 59 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 6899999999999999999999999999999999999999999888889988776554
No 93
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=98.40 E-value=2.3e-07 Score=101.83 Aligned_cols=73 Identities=12% Similarity=0.069 Sum_probs=60.5
Q ss_pred cccCCCCCcccccCCCCcHHHHHHH---cCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 420 SEQCLSSESESEVTGITTSLHEAAQ---SSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 420 ~~~~~~~~~~~~~~~g~TpLH~AA~---~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
.+++........+..|+||||+|+. .|+.++|++||++|||++.+|..|.||+|+|+..+..++++.+...+.
T Consensus 156 ~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 231 (497)
T 3lvq_E 156 QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 231 (497)
T ss_dssp CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCC
T ss_pred ccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 3443333233457889999999955 999999999999999999999999999999999999999998876543
No 94
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=98.39 E-value=2.1e-07 Score=90.90 Aligned_cols=59 Identities=19% Similarity=0.085 Sum_probs=33.6
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
.+..|.||||+|+..|+.++|++||+.|+|++..|..|.||+++|...+..++++.+..
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 126 (285)
T 1wdy_A 68 RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK 126 (285)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHH
Confidence 34455566666666666666666665566665555556666665555555555554443
No 95
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=98.39 E-value=2.4e-07 Score=89.26 Aligned_cols=63 Identities=22% Similarity=0.235 Sum_probs=56.0
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccC-------------CCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDE-------------NGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~-------------~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..|..|+||||+|+..|+.++|++||+.|+|++..+. .|.||+++|+..+..++++.+...+.
T Consensus 70 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 145 (232)
T 2rfa_A 70 SELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGA 145 (232)
T ss_dssp STTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTC
T ss_pred ccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 3567899999999999999999999999999999876 79999999998888899998776543
No 96
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=98.38 E-value=1.9e-07 Score=94.37 Aligned_cols=63 Identities=17% Similarity=0.113 Sum_probs=52.2
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..|..|+||||+|+..|+.++|++||+.|+|++.+|..|.||+++|+..+..++++.+...+.
T Consensus 87 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 149 (285)
T 3d9h_A 87 IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGA 149 (285)
T ss_dssp EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCC
Confidence 356788899999999999999998888889998888888999988888777888887765443
No 97
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=98.38 E-value=2.1e-07 Score=93.98 Aligned_cols=61 Identities=18% Similarity=0.112 Sum_probs=44.3
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
..+..|+||||+|+..|+.++|++||+.|+|++..+ .|.||+++|+..+..++++.+...+
T Consensus 120 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g 180 (285)
T 3d9h_A 120 GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYG 180 (285)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 356677788888888888888888888888777544 3778888887777777777665543
No 98
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=98.38 E-value=1.9e-07 Score=98.86 Aligned_cols=58 Identities=24% Similarity=0.251 Sum_probs=50.6
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRF 487 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~ 487 (669)
.++..|+||||+|+..|+.+||++||++||||+++|.+|+||+++|...+..++...+
T Consensus 339 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l 396 (437)
T 1n11_A 339 AKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 396 (437)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHH
Confidence 3567899999999999999999999999999999999999999999877666655544
No 99
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=98.38 E-value=1.8e-07 Score=91.97 Aligned_cols=59 Identities=19% Similarity=0.016 Sum_probs=49.6
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCC-cceeec--ccccHHHHHHHH
Q 005932 429 ESEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGR-TPYMLA--SEKEVRNTFRRF 487 (669)
Q Consensus 429 ~~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~Gk-TP~~lA--~dk~~Rd~Fr~~ 487 (669)
..+|..|+||||+|+..|+.++|++||++|||++.+|..|. ||+++| ...+..++++.+
T Consensus 97 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~L 158 (239)
T 1ycs_B 97 NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 158 (239)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHH
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHH
Confidence 34677899999999999999999999999999999998887 999999 444445555544
No 100
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=98.37 E-value=2.2e-07 Score=91.26 Aligned_cols=46 Identities=22% Similarity=0.002 Sum_probs=43.7
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHH---CCCCcCCccCCCCcceeecc
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLE---QGLDPCIKDENGRTPYMLAS 476 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe---~GADP~ikn~~GkTP~~lA~ 476 (669)
.+..|+||||+|+..|+.++|++||+ .|+|++.+|..|+||+|+|+
T Consensus 136 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~ 184 (260)
T 3jxi_A 136 YFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALV 184 (260)
T ss_dssp SCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHH
Confidence 33689999999999999999999999 99999999999999999999
No 101
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=98.37 E-value=2e-07 Score=98.71 Aligned_cols=63 Identities=19% Similarity=0.154 Sum_probs=57.6
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..+..|+||||+|+..|+.++|++||+.|+|++.+|..|+||+|+|...+..++++.+...+.
T Consensus 306 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga 368 (437)
T 1n11_A 306 ATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGA 368 (437)
T ss_dssp CCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcC
Confidence 356789999999999999999999999999999999999999999999999999998876543
No 102
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.37 E-value=1.9e-07 Score=99.91 Aligned_cols=58 Identities=21% Similarity=0.154 Sum_probs=38.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHc
Q 005932 433 TGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMAS 490 (669)
Q Consensus 433 ~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~ 490 (669)
..|.||||+|+..|+.++|++||++|||++.+|..|.||+|+|+..+..++++.+...
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~ 290 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKR 290 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHC
Confidence 5566777777777777777777777777777777777777777666666666655443
No 103
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=98.35 E-value=2.4e-07 Score=91.95 Aligned_cols=48 Identities=25% Similarity=0.042 Sum_probs=44.7
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHH---CCCCcCCccCCCCcceeecccc
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLE---QGLDPCIKDENGRTPYMLASEK 478 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe---~GADP~ikn~~GkTP~~lA~dk 478 (669)
.+..|+||||+|+..|+.++|++||+ .|+|++.+|..|+||+|+|+..
T Consensus 144 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 144 GFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEV 194 (273)
T ss_dssp CCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHc
Confidence 44579999999999999999999999 9999999999999999999853
No 104
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=98.33 E-value=1.6e-07 Score=96.21 Aligned_cols=57 Identities=35% Similarity=0.515 Sum_probs=44.0
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 433 TGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 433 ~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
..|+||||+||..|+.+||++||++||||+.+|..|.+|++++........+.....
T Consensus 57 ~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (337)
T 4g8k_A 57 EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLS 113 (337)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhh
Confidence 457888888888888888888888888888888888888888776666666554443
No 105
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=98.31 E-value=2.3e-07 Score=93.95 Aligned_cols=65 Identities=17% Similarity=0.113 Sum_probs=56.3
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCC-CcceeecccccHHHHHHHHHHcCCCc
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENG-RTPYMLASEKEVRNTFRRFMASNPDK 494 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~G-kTP~~lA~dk~~Rd~Fr~~~~~~~d~ 494 (669)
..+..|+||||+|+..|+.++|++||+.|+|++.+|..| .||+++|+..+..++++.+...+++.
T Consensus 90 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 90 QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 356789999999999999999999999999999999999 89999999888888888877665544
No 106
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=98.31 E-value=1.9e-07 Score=94.60 Aligned_cols=58 Identities=29% Similarity=0.293 Sum_probs=53.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 434 GITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 434 ~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
+|+||||+|+..|+.++|++||+.|+||+.+|..|.||+++|+..+..++++.+...+
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 118 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN 118 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC
Confidence 4899999999999999999999999999999999999999999888888888776554
No 107
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=98.31 E-value=2.5e-07 Score=95.49 Aligned_cols=62 Identities=15% Similarity=0.101 Sum_probs=56.5
Q ss_pred ccCCCCcHHHHHHHc---CCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 431 EVTGITTSLHEAAQS---SIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~---G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
.+..|+||||+|+.. |+.++|++||+.|||++.+|..|.||+|+|+..+..++++.+...+.
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga 250 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 578899999999997 89999999999999999999999999999998888899988776543
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.28 E-value=4.6e-07 Score=96.91 Aligned_cols=59 Identities=20% Similarity=0.226 Sum_probs=54.3
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFM 488 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~ 488 (669)
..|..|+||||+|+..|+.++|++||++|||++++|..|.||+++|...+..++++.+.
T Consensus 263 ~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 263 QADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999888888877664
No 109
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=98.28 E-value=3.8e-07 Score=95.79 Aligned_cols=60 Identities=18% Similarity=0.160 Sum_probs=53.8
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
..|..|+||||+|+..|+.+||++||+.|||++.+|..|.||+++|+..+..++++.+..
T Consensus 161 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 220 (373)
T 2fo1_E 161 AMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLN 220 (373)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 356789999999999999999999999999999999999999999998888888886653
No 110
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=98.26 E-value=5.8e-07 Score=92.97 Aligned_cols=63 Identities=11% Similarity=0.022 Sum_probs=57.2
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHCCCC-----cCCccCCCCcceeecccccHHHHHHHHHHcCC
Q 005932 430 SEVTGITTSLHEAAQSSIAQKVLELLEQGLD-----PCIKDENGRTPYMLASEKEVRNTFRRFMASNP 492 (669)
Q Consensus 430 ~~~~~g~TpLH~AA~~G~~~iV~~LLe~GAD-----P~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~ 492 (669)
..|..|+||||+|+..|+.++|++||+.|+| ++..|..|.||+|+|+..+..++++.+...+.
T Consensus 168 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 235 (364)
T 3ljn_A 168 AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGI 235 (364)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 4567899999999999999999999999999 99999999999999999999999998876543
No 111
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=98.24 E-value=5.1e-07 Score=92.41 Aligned_cols=58 Identities=22% Similarity=0.197 Sum_probs=33.1
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHH-CCCCcCCccCCCCcceeecccccHHHHHHHHHH
Q 005932 432 VTGITTSLHEAAQSSIAQKVLELLE-QGLDPCIKDENGRTPYMLASEKEVRNTFRRFMA 489 (669)
Q Consensus 432 ~~~g~TpLH~AA~~G~~~iV~~LLe-~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~ 489 (669)
+..|+||||+|+..|+.++|++||. .|+|++.+|.+|+||+|+|+..+..++++.+..
T Consensus 236 d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 294 (337)
T 4g8k_A 236 GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK 294 (337)
T ss_dssp CGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHT
T ss_pred CCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 3455566666666666666665554 355666666666666666655555555555443
No 112
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.14 E-value=1.5e-06 Score=82.80 Aligned_cols=60 Identities=23% Similarity=0.256 Sum_probs=48.4
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCCccCCCCcceeecccccHHHHHHHHHHcC
Q 005932 432 VTGITTSLHEAAQSSIAQKVLELLEQGLDPCIKDENGRTPYMLASEKEVRNTFRRFMASN 491 (669)
Q Consensus 432 ~~~g~TpLH~AA~~G~~~iV~~LLe~GADP~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~ 491 (669)
+..|.||||+|+..|+.++|++||+.|+||+..|..|.||+++|...+..++++.+...+
T Consensus 73 ~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~ 132 (240)
T 3eu9_A 73 GDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG 132 (240)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcC
Confidence 345788888888888888888888888888888888888888888777777777766543
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=97.70 E-value=4.2e-06 Score=89.69 Aligned_cols=54 Identities=11% Similarity=0.082 Sum_probs=49.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCcCC--ccCCCCcceeecc-cccHHHHHHHHHH
Q 005932 436 TTSLHEAAQSSIAQKVLELLEQGLDPCI--KDENGRTPYMLAS-EKEVRNTFRRFMA 489 (669)
Q Consensus 436 ~TpLH~AA~~G~~~iV~~LLe~GADP~i--kn~~GkTP~~lA~-dk~~Rd~Fr~~~~ 489 (669)
+||||+||..|+.+||++||+.|+|++. .|..|.||+++|+ ..+..++++.+..
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~ 220 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLD 220 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHh
Confidence 8999999999999999999999999988 8999999999999 9999999887653
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=97.46 E-value=9.3e-06 Score=87.01 Aligned_cols=62 Identities=19% Similarity=0.173 Sum_probs=51.0
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---CCccCCCCcceeecccccHHHHHHHHHHcCCC
Q 005932 431 EVTGITTSLHEAAQSSIAQKVLELLEQGLDP---CIKDENGRTPYMLASEKEVRNTFRRFMASNPD 493 (669)
Q Consensus 431 ~~~~g~TpLH~AA~~G~~~iV~~LLe~GADP---~ikn~~GkTP~~lA~dk~~Rd~Fr~~~~~~~d 493 (669)
.+..|.||||+||..|+.+||++||+.|||+ ++.+.+ .||+++|+..+..++++.+...+.+
T Consensus 124 ~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~ 188 (376)
T 2aja_A 124 IQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPT 188 (376)
T ss_dssp -CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGG
T ss_pred hccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCc
Confidence 3456789999999999999999999999884 444444 9999999999999999988766554
No 115
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=95.92 E-value=0.0026 Score=58.46 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=34.2
Q ss_pred ccccccccccccccCCHHHHHhhcccchhhhhhhhhhcC
Q 005932 75 ALTRWTCNTCKTEFESLQDQRSHFKSDVHRFNVKLTIAG 113 (669)
Q Consensus 75 ~~~~~~C~~C~~~F~~~~~qr~H~kSdwHryNlKrkl~g 113 (669)
+-..+.|.+|++.|.+...+..||++.||+.||++.+.+
T Consensus 29 ~~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~ 67 (127)
T 1zu1_A 29 IFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAI 67 (127)
T ss_dssp TBCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred cCCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcc
Confidence 334589999999999999999999999999999976653
No 116
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=88.68 E-value=0.19 Score=46.34 Aligned_cols=45 Identities=22% Similarity=0.414 Sum_probs=37.9
Q ss_pred ccccccccccccCCHHHHHhhcccchhhhhhhhhhcCCCCCCHHHHH
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKSDVHRFNVKLTIAGKDIVKEEDFE 123 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kSdwHryNlKrkl~gl~plse~eFe 123 (669)
..+.|..|+..|.+...+..|++|--|+=++|+ +. ..|.|.++-+
T Consensus 49 kpfyC~~C~K~F~~~~~L~~H~rsK~HKrrvk~-l~-~~p~Tq~eAe 93 (124)
T 1zr9_A 49 GLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQ-LS-VEPYSQEEAE 93 (124)
T ss_dssp GCSEETTTTEECSSHHHHHHHTTCHHHHHHHHH-HT-SCSSCTTTSS
T ss_pred cceEcccCcchhCCHHHHHHHHhhhhhhHHHHH-hc-cCCCcHHHHH
Confidence 469999999999999999999999999999995 44 4566666544
No 117
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=88.66 E-value=0.2 Score=45.71 Aligned_cols=36 Identities=25% Similarity=0.383 Sum_probs=32.7
Q ss_pred ccccccccccccccCCHHHHHhhcccchhhhhhhhh
Q 005932 75 ALTRWTCNTCKTEFESLQDQRSHFKSDVHRFNVKLT 110 (669)
Q Consensus 75 ~~~~~~C~~C~~~F~~~~~qr~H~kSdwHryNlKrk 110 (669)
....+.|.+|++.|.+...+..||.+-+|+=|+|+.
T Consensus 90 ~~~~~~C~~C~~~f~s~~~~~~H~~gk~H~~~~~~~ 125 (127)
T 1zu1_A 90 EDRSKCCPVCNMTFSSPVVAESHYIGKTHIKNLRLR 125 (127)
T ss_dssp CCTTTEETTTTEECSSHHHHHHHHTSHHHHHHHHHH
T ss_pred CCCCeEcCCCCCEeCCHHHHHHHHCCHHHHHHHHHh
Confidence 345689999999999999999999999999999974
No 118
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=76.81 E-value=1.4 Score=27.10 Aligned_cols=22 Identities=18% Similarity=0.511 Sum_probs=19.8
Q ss_pred ccccccccccCCHHHHHhhccc
Q 005932 79 WTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 79 ~~C~~C~~~F~~~~~qr~H~kS 100 (669)
+.|..|+..|.....++.|.+.
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~~ 23 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQRV 23 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGGG
T ss_pred ccCCCCCCcCCCHHHHHHHHHH
Confidence 6799999999999999999864
No 119
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=75.00 E-value=0.91 Score=32.73 Aligned_cols=26 Identities=15% Similarity=0.416 Sum_probs=22.8
Q ss_pred cccccccccccccCCHHHHHhhcccc
Q 005932 76 LTRWTCNTCKTEFESLQDQRSHFKSD 101 (669)
Q Consensus 76 ~~~~~C~~C~~~F~~~~~qr~H~kSd 101 (669)
+..|.|..|...|.+...+..||.+.
T Consensus 3 ~EGFiCP~C~~~l~s~~~L~~Hye~~ 28 (34)
T 3mjh_B 3 SEGFICPQCMKSLGSADELFKHYEAV 28 (34)
T ss_dssp SEEEECTTTCCEESSHHHHHHHHHHH
T ss_pred CcccCCcHHHHHcCCHHHHHHHHHhc
Confidence 34599999999999999999999754
No 120
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=74.50 E-value=1.4 Score=27.42 Aligned_cols=23 Identities=17% Similarity=0.678 Sum_probs=20.4
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYRV 25 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHTT
T ss_pred CccCCCCCcccCCHHHHHHHHHh
Confidence 47899999999999999999764
No 121
>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A
Probab=74.45 E-value=1.6 Score=31.82 Aligned_cols=23 Identities=22% Similarity=0.492 Sum_probs=19.7
Q ss_pred ccccccccccccCCHHHHHhhcc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~k 99 (669)
....|.+|+++|.+...++.|=|
T Consensus 7 ~~~~C~~C~IsF~~l~ty~aHKk 29 (36)
T 1fu9_A 7 MKKYCSTCDISFNYVKTYLAHKQ 29 (36)
T ss_dssp CCSEETTTTEECSSHHHHHHHHH
T ss_pred CcCeeccccceehhhHHHhhhhe
Confidence 45789999999999999998843
No 122
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=74.31 E-value=2.5 Score=34.65 Aligned_cols=27 Identities=19% Similarity=0.643 Sum_probs=20.3
Q ss_pred CCccccccccCCCCCCCce-eccccccCh
Q 005932 629 TDINCSCCGASLAGKVPFH-RYNYKYCST 656 (669)
Q Consensus 629 ~~~rC~~Cg~sl~gkvPF~-yl~~~fCSt 656 (669)
..+||+.|+.- .|.+||. |-...||+.
T Consensus 14 ~~~rC~~C~kk-vgl~~f~CrCg~~FC~~ 41 (64)
T 1wg2_A 14 PNNRCFSCNKK-VGVMGFKCKCGSTFCGS 41 (64)
T ss_dssp CSCSCTTTCCC-CTTSCEECTTSCEECSS
T ss_pred cCCcChhhCCc-ccccCeEeecCCEeccc
Confidence 35799999986 4556776 567888873
No 123
>2das_A Zinc finger MYM-type protein 5; trash domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.17
Probab=72.55 E-value=6.8 Score=31.69 Aligned_cols=38 Identities=26% Similarity=0.678 Sum_probs=29.5
Q ss_pred CCCCccccccccCCC-CCCCceec--cccccChHHHHHHHH
Q 005932 627 LATDINCSCCGASLA-GKVPFHRY--NYKYCSTSCMHVHRE 664 (669)
Q Consensus 627 ~~~~~rC~~Cg~sl~-gkvPF~yl--~~~fCSt~Cl~~Hr~ 664 (669)
.+....|..|-..|. |++-|++- .--|||+.||..+..
T Consensus 17 ~~~~v~C~~CKk~lqKGQtAyqrkGs~~LFCS~~CL~~fs~ 57 (62)
T 2das_A 17 KPAKITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSS 57 (62)
T ss_dssp SCSSCBCTTTCCBCCTTSCCEECTTCCCEESSHHHHHHHCC
T ss_pred CccccChhhccchhhcCceeeeecCchhheechHHHcccCC
Confidence 345678999998875 88888874 557999999987653
No 124
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=72.17 E-value=1.5 Score=27.24 Aligned_cols=23 Identities=22% Similarity=0.745 Sum_probs=20.2
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....+..|.+.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLKRHYRS 24 (29)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 37899999999999999999764
No 125
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=71.84 E-value=1.6 Score=27.37 Aligned_cols=23 Identities=22% Similarity=0.635 Sum_probs=20.3
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMRG 25 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHTT
T ss_pred CcCCCCCCcccCCHHHHHHHHHh
Confidence 47899999999999999999764
No 126
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=71.45 E-value=1.2 Score=34.64 Aligned_cols=30 Identities=27% Similarity=0.748 Sum_probs=23.8
Q ss_pred ccccccccCCCCCCCceeccccccChHHHHHH
Q 005932 631 INCSCCGASLAGKVPFHRYNYKYCSTSCMHVH 662 (669)
Q Consensus 631 ~rC~~Cg~sl~gkvPF~yl~~~fCSt~Cl~~H 662 (669)
..|-.||..|... +| +-+=+|||..|-+.|
T Consensus 19 ~~C~~CG~~i~~~-~~-~r~krFCS~sCR~~y 48 (49)
T 2l8e_A 19 LKCEYCGKYAPAE-QF-RGSKRFCSMTCAKRY 48 (49)
T ss_dssp EECTTTCCEEEGG-GC-TTTSSSCSHHHHHHH
T ss_pred CcChhccCccccc-cC-CCCCccCCHHHHhhh
Confidence 4699999988763 56 447799999998765
No 127
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=71.31 E-value=1.5 Score=27.21 Aligned_cols=23 Identities=13% Similarity=0.547 Sum_probs=20.1
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHHH
Confidence 47899999999999999999753
No 128
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=71.12 E-value=1.1 Score=36.13 Aligned_cols=35 Identities=29% Similarity=0.563 Sum_probs=26.0
Q ss_pred CccccccccC--CCCCCCceeccccccChHHHHHHHH
Q 005932 630 DINCSCCGAS--LAGKVPFHRYNYKYCSTSCMHVHRE 664 (669)
Q Consensus 630 ~~rC~~Cg~s--l~gkvPF~yl~~~fCSt~Cl~~Hr~ 664 (669)
...|..|+.. -.+|.=.-+-...|||..|.+.|+.
T Consensus 11 ~~~C~vC~~~~~~~akY~CPrC~~rYCSl~C~k~Hk~ 47 (59)
T 1x4s_A 11 AGPCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTHGT 47 (59)
T ss_dssp CEEECSSCTTCCEEECEECTTTCCEESSHHHHHHHCC
T ss_pred CCcCcCCCCCcCCCccccCcCCCCCccChHHHHHHhH
Confidence 4589999852 2444444457889999999999974
No 129
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=71.07 E-value=1.6 Score=27.31 Aligned_cols=22 Identities=18% Similarity=0.440 Sum_probs=20.1
Q ss_pred ccccccccccCCHHHHHhhccc
Q 005932 79 WTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 79 ~~C~~C~~~F~~~~~qr~H~kS 100 (669)
+.|..|+..|.....++.|.+.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHILL 24 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHTG
T ss_pred ccCCCCCchhCCHHHHHHHHHH
Confidence 6899999999999999999874
No 130
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=71.54 E-value=1 Score=27.74 Aligned_cols=22 Identities=18% Similarity=0.602 Sum_probs=19.6
Q ss_pred ccccccccccCCHHHHHhhccc
Q 005932 79 WTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 79 ~~C~~C~~~F~~~~~qr~H~kS 100 (669)
+.|..|+..|.....++.|.+.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQLANHIRH 24 (26)
Confidence 6899999999999999998764
No 131
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.29 E-value=4.3 Score=32.39 Aligned_cols=33 Identities=27% Similarity=0.561 Sum_probs=24.6
Q ss_pred ccccccccCCCCCCCceeccccccChHHHHHHHHh
Q 005932 631 INCSCCGASLAGKVPFHRYNYKYCSTSCMHVHREV 665 (669)
Q Consensus 631 ~rC~~Cg~sl~gkvPF~yl~~~fCSt~Cl~~Hr~~ 665 (669)
..|.-|+. ..|.==-+-.-.|||..|.+.|+..
T Consensus 13 ~~C~vC~~--~~kY~CPrC~~~yCSl~C~k~Hk~~ 45 (56)
T 2yqq_A 13 VVCVICLE--KPKYRCPACRVPYCSVVCFRKHKEQ 45 (56)
T ss_dssp CCCTTTCS--CCSEECTTTCCEESSHHHHHHHHHH
T ss_pred CccCcCcC--CCeeeCCCCCCCeeCHHHHHHHHhh
Confidence 36999986 5543333467889999999999863
No 132
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=67.22 E-value=2.2 Score=26.38 Aligned_cols=23 Identities=17% Similarity=0.576 Sum_probs=20.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLRI 24 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHHH
Confidence 47899999999999999998763
No 133
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=65.96 E-value=2.6 Score=27.79 Aligned_cols=23 Identities=22% Similarity=0.582 Sum_probs=20.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~~ 29 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLKV 29 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG
T ss_pred CeeCCCCCcccCCHHHHHHHHHH
Confidence 47999999999999999999764
No 134
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=65.36 E-value=2.3 Score=27.83 Aligned_cols=23 Identities=30% Similarity=0.608 Sum_probs=20.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~ 29 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIRE 29 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCcchhCCHHHHHHHHHH
Confidence 48999999999999999999763
No 135
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=65.16 E-value=3.2 Score=26.01 Aligned_cols=20 Identities=20% Similarity=0.501 Sum_probs=18.2
Q ss_pred cccccccccccCCHHHHHhh
Q 005932 78 RWTCNTCKTEFESLQDQRSH 97 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H 97 (669)
.+.|..|+..|.+...++.|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H 21 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRH 21 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHH
T ss_pred CcCCcccCcccCChHHHHHH
Confidence 37899999999999999999
No 136
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=64.70 E-value=2.6 Score=26.15 Aligned_cols=23 Identities=17% Similarity=0.603 Sum_probs=20.1
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...+..|.+.
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 47899999999999999998763
No 137
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=64.47 E-value=2.6 Score=26.18 Aligned_cols=22 Identities=18% Similarity=0.545 Sum_probs=19.4
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.....++.|.+
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKTHIK 23 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHH
Confidence 3689999999999999999865
No 138
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=64.46 E-value=3.4 Score=27.51 Aligned_cols=23 Identities=22% Similarity=0.479 Sum_probs=20.4
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGG
T ss_pred CccCCCCCcccCcHHHHHHHHHH
Confidence 48999999999999999999763
No 139
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.93 E-value=3.3 Score=27.51 Aligned_cols=23 Identities=22% Similarity=0.618 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 47999999999999999999774
No 140
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.36 E-value=3.9 Score=28.06 Aligned_cols=23 Identities=17% Similarity=0.518 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIRV 33 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGGG
T ss_pred CeeCCCccchhCCHHHHHHHHHH
Confidence 58999999999999999999864
No 141
>3j21_V 50S ribosomal protein L24E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=62.09 E-value=4.1 Score=33.56 Aligned_cols=34 Identities=26% Similarity=0.503 Sum_probs=27.4
Q ss_pred CccccccccCCC---CCCCceecc---ccccChHHHHHHHH
Q 005932 630 DINCSCCGASLA---GKVPFHRYN---YKYCSTSCMHVHRE 664 (669)
Q Consensus 630 ~~rC~~Cg~sl~---gkvPF~yl~---~~fCSt~Cl~~Hr~ 664 (669)
...|++||..|- | +.|=+.| |.|||..|-..+..
T Consensus 4 ~~~C~Fcg~~IyPG~G-~~~Vr~Dgkvf~FcssKC~k~f~~ 43 (66)
T 3j21_V 4 WNVCSYCGKPFEPGTG-KMYVRNDGRVLFFCSRKCERYYFM 43 (66)
T ss_dssp CCBCTTTCSBCCTTCC-EEEECSSSCEEEESSHHHHHHHHT
T ss_pred eeEecCcCCcccCCCC-eEEEecCCcEEEEECHHHHHHHHc
Confidence 347999999987 4 4777776 77999999988854
No 142
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.71 E-value=2.6 Score=28.15 Aligned_cols=23 Identities=26% Similarity=0.647 Sum_probs=20.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIKT 31 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHH
Confidence 48999999999999999999763
No 143
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.62 E-value=3.7 Score=27.07 Aligned_cols=22 Identities=27% Similarity=0.511 Sum_probs=19.9
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.....+..|.+
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTLKSHKL 30 (36)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHH
T ss_pred CeecCcCCCCcCchHHHHHHHH
Confidence 5899999999999999999875
No 144
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=65.66 E-value=1.7 Score=27.31 Aligned_cols=22 Identities=18% Similarity=0.469 Sum_probs=19.5
Q ss_pred ccccccccccCCHHHHHhhccc
Q 005932 79 WTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 79 ~~C~~C~~~F~~~~~qr~H~kS 100 (669)
+.|..|+..|.....++.|.+.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSLIAHVRQ 24 (29)
Confidence 6899999999999999999763
No 145
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=65.50 E-value=1.7 Score=27.26 Aligned_cols=23 Identities=17% Similarity=0.533 Sum_probs=20.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVRI 25 (30)
Confidence 37899999999999999998764
No 146
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.21 E-value=4.5 Score=27.87 Aligned_cols=23 Identities=35% Similarity=0.790 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHLRI 33 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHTTT
T ss_pred CEECCCCCCccCCHHHHHHHHHh
Confidence 58999999999999999999874
No 147
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.34 E-value=2.9 Score=27.76 Aligned_cols=23 Identities=17% Similarity=0.520 Sum_probs=20.4
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMNR 31 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHHH
T ss_pred CccCCCCCchhCCHHHHHHHHHH
Confidence 58999999999999999999763
No 148
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=60.05 E-value=3.4 Score=28.15 Aligned_cols=23 Identities=39% Similarity=0.735 Sum_probs=20.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.++
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~~ 28 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMNV 28 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHHT
T ss_pred ceECCCCCcccCCHHHHHHHHHH
Confidence 47999999999999999999764
No 149
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=59.74 E-value=3.5 Score=27.22 Aligned_cols=22 Identities=18% Similarity=0.507 Sum_probs=19.8
Q ss_pred ccccccccccCCHHHHHhhccc
Q 005932 79 WTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 79 ~~C~~C~~~F~~~~~qr~H~kS 100 (669)
+.|..|+..|.....+..|.+.
T Consensus 3 ~~C~~C~k~F~~~~~L~~H~~~ 24 (33)
T 1rim_A 3 FACPECPKRFMRSDHLSKHITL 24 (33)
T ss_dssp CCCSSSCCCCSSHHHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHHHH
Confidence 6899999999999999999763
No 150
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.23 E-value=5.1 Score=28.33 Aligned_cols=23 Identities=17% Similarity=0.472 Sum_probs=21.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHSV 34 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTTT
T ss_pred ccCCCCCCcccCcHHHHHHHHHh
Confidence 58999999999999999999874
No 151
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.22 E-value=3.7 Score=28.17 Aligned_cols=23 Identities=26% Similarity=0.540 Sum_probs=20.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~ 32 (42)
T 2yte_A 10 PYSCAECKETFSDNNRLVQHQKM 32 (42)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 48999999999999999999764
No 152
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.15 E-value=3.1 Score=27.47 Aligned_cols=22 Identities=14% Similarity=0.415 Sum_probs=19.9
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.....++.|.+
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLR 30 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHH
Confidence 5899999999999999999876
No 153
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.10 E-value=5 Score=28.25 Aligned_cols=23 Identities=22% Similarity=0.405 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRGI 34 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHTT
T ss_pred CeECCCCCcccCCHHHHHHHHHh
Confidence 48999999999999999999874
No 154
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.76 E-value=5 Score=28.22 Aligned_cols=23 Identities=22% Similarity=0.419 Sum_probs=21.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQKI 34 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT
T ss_pred CEECCccCcccCCHHHHHHHHHH
Confidence 48999999999999999999874
No 155
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.55 E-value=4.9 Score=27.82 Aligned_cols=23 Identities=26% Similarity=0.522 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTRT 34 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHhhh
Confidence 48999999999999999999864
No 156
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.44 E-value=4.8 Score=28.27 Aligned_cols=23 Identities=17% Similarity=0.463 Sum_probs=21.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRI 34 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGG
T ss_pred CcCCCCCCchhCCHHHHHHHHHH
Confidence 48999999999999999999875
No 157
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.77 E-value=3.8 Score=27.19 Aligned_cols=22 Identities=23% Similarity=0.628 Sum_probs=20.0
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.....++.|.+
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHLR 30 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHHH
T ss_pred CEECCCCCceeCCHHHHHHHHH
Confidence 5899999999999999999976
No 158
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.63 E-value=5.6 Score=28.05 Aligned_cols=23 Identities=22% Similarity=0.536 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQRV 34 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGGG
T ss_pred CCCCCCCCcccCCHHHHHHHHHh
Confidence 48999999999999999999864
No 159
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.54 E-value=4.7 Score=28.32 Aligned_cols=23 Identities=22% Similarity=0.489 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRRI 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG
T ss_pred CEECCCCChhhCChHHHHHHHHh
Confidence 58999999999999999999863
No 160
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.50 E-value=5.2 Score=28.15 Aligned_cols=23 Identities=22% Similarity=0.426 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRGI 34 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTT
T ss_pred CeECCCCCcccCChhHHHHHhHh
Confidence 48999999999999999999764
No 161
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.49 E-value=5.5 Score=28.02 Aligned_cols=23 Identities=22% Similarity=0.557 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQRV 34 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGGG
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 48999999999999999999874
No 162
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=57.25 E-value=4.4 Score=27.84 Aligned_cols=23 Identities=22% Similarity=0.567 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~ 32 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRT 32 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG
T ss_pred CccCCCcChhhCCHHHHHHHHHh
Confidence 48999999999999999999764
No 163
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.10 E-value=5.6 Score=27.89 Aligned_cols=23 Identities=17% Similarity=0.326 Sum_probs=21.1
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRI 34 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT
T ss_pred CeeCCCCCchhCCHHHHHHHHHH
Confidence 58999999999999999999875
No 164
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.99 E-value=4.5 Score=28.37 Aligned_cols=23 Identities=22% Similarity=0.366 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHERT 34 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG
T ss_pred CeECCCCCcccCchHHHHHHHhH
Confidence 58999999999999999999774
No 165
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.84 E-value=4.9 Score=27.51 Aligned_cols=23 Identities=17% Similarity=0.420 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~ 32 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHERI 32 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGGG
T ss_pred CeECCCCCCCcCCHHHHHHHHHH
Confidence 48999999999999999999764
No 166
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.70 E-value=4.7 Score=28.48 Aligned_cols=23 Identities=17% Similarity=0.453 Sum_probs=21.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQRI 34 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCcCCcccCCHHHHHHHHHH
Confidence 48999999999999999999874
No 167
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.49 E-value=5.5 Score=28.01 Aligned_cols=23 Identities=22% Similarity=0.546 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQVI 34 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHTT
T ss_pred CeECCcCChhhCCHHHHHHHHHH
Confidence 58999999999999999999874
No 168
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=56.27 E-value=2.8 Score=31.08 Aligned_cols=25 Identities=24% Similarity=0.413 Sum_probs=19.4
Q ss_pred cccccccccccccCCHHHHHhhcccchh
Q 005932 76 LTRWTCNTCKTEFESLQDQRSHFKSDVH 103 (669)
Q Consensus 76 ~~~~~C~~C~~~F~~~~~qr~H~kSdwH 103 (669)
.+.+.|..|+..|.. .++-+| .|||
T Consensus 7 ~~~~~C~~C~~~i~~-~~~~EH--~D~H 31 (39)
T 2i5o_A 7 EDQVPCEKCGSLVPV-WDMPEH--MDYH 31 (39)
T ss_dssp CCEEECTTTCCEEEG-GGHHHH--HHHH
T ss_pred CCCcccccccCcCCc-ccccch--hhHH
Confidence 345799999999876 566787 4788
No 169
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.16 E-value=4.2 Score=28.54 Aligned_cols=23 Identities=17% Similarity=0.585 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQRT 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT
T ss_pred CcCCCCCCcccCCHHHHHHHHHH
Confidence 58999999999999999999764
No 170
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.14 E-value=4.7 Score=28.40 Aligned_cols=23 Identities=17% Similarity=0.452 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQRI 34 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG
T ss_pred CCCCCCCCcccCCHHHHHHHHhH
Confidence 48999999999999999999874
No 171
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.14 E-value=5.2 Score=27.86 Aligned_cols=23 Identities=26% Similarity=0.645 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQKT 34 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGGG
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 48999999999999999999874
No 172
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.96 E-value=6 Score=27.88 Aligned_cols=23 Identities=22% Similarity=0.612 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQRV 34 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHTT
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 48999999999999999999764
No 173
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.71 E-value=6.4 Score=27.73 Aligned_cols=23 Identities=13% Similarity=0.456 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQRV 34 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGGG
T ss_pred CeeCcccCchhCCHHHHHHHHHh
Confidence 58999999999999999999874
No 174
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.64 E-value=5 Score=27.87 Aligned_cols=23 Identities=26% Similarity=0.504 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQKT 34 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHTT
T ss_pred CeeCCCCCCccCCHHHHHHHHHH
Confidence 48999999999999999999875
No 175
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.61 E-value=5 Score=28.15 Aligned_cols=23 Identities=17% Similarity=0.510 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQRI 34 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 48999999999999999999874
No 176
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.44 E-value=5.1 Score=28.20 Aligned_cols=23 Identities=22% Similarity=0.489 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQKI 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCchhCCHHHHHHHHHH
Confidence 48999999999999999999874
No 177
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=55.40 E-value=4.9 Score=24.60 Aligned_cols=22 Identities=23% Similarity=0.724 Sum_probs=19.0
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.....+..|.+
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~ 23 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVGNLKAHLK 23 (29)
T ss_dssp CCCCSSCCCCCCTTTHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHH
Confidence 3689999999999998888865
No 178
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.33 E-value=5 Score=28.14 Aligned_cols=23 Identities=22% Similarity=0.501 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQAI 34 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHTT
T ss_pred CeECCCCChhhCCHHHHHHHHHH
Confidence 58999999999999999999874
No 179
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.21 E-value=6.2 Score=27.74 Aligned_cols=23 Identities=17% Similarity=0.414 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRRI 34 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHTT
T ss_pred CeECCCCCceeCCHHHHHHHHHH
Confidence 58999999999999999999874
No 180
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.99 E-value=6.6 Score=27.56 Aligned_cols=23 Identities=22% Similarity=0.426 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRGI 34 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGGG
T ss_pred CeECCCCCCeeCCHHHHHHHhhh
Confidence 58999999999999999999764
No 181
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.69 E-value=5.7 Score=27.94 Aligned_cols=23 Identities=22% Similarity=0.512 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMV 34 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGG
T ss_pred CccCCCccchhCCHHHHHHHHHH
Confidence 58999999999999999999874
No 182
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.60 E-value=5.7 Score=28.02 Aligned_cols=23 Identities=22% Similarity=0.478 Sum_probs=21.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQKI 34 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGGG
T ss_pred CeECCCCCchhCCHHHHHHHHHH
Confidence 48999999999999999999874
No 183
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.52 E-value=4.1 Score=28.25 Aligned_cols=23 Identities=22% Similarity=0.644 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRT 34 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHH
T ss_pred CeECCCCCcccCCHhHHHHHHHH
Confidence 48999999999999999999764
No 184
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.42 E-value=4.9 Score=28.36 Aligned_cols=23 Identities=26% Similarity=0.560 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2en9_A 12 LFKCNECKKTFTQSSSLTVHQRI 34 (46)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CEECCccCcccCCHHHHHHHHHH
Confidence 58999999999999999999763
No 185
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=54.14 E-value=6.7 Score=27.54 Aligned_cols=23 Identities=26% Similarity=0.657 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNV 34 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGG
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 48999999999999999999875
No 186
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.03 E-value=6.9 Score=27.54 Aligned_cols=23 Identities=22% Similarity=0.517 Sum_probs=21.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRT 34 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTT
T ss_pred CcCCCccChhhCChHHHHHHHHH
Confidence 48999999999999999999875
No 187
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.00 E-value=6.4 Score=27.58 Aligned_cols=23 Identities=22% Similarity=0.547 Sum_probs=21.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQRI 34 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHTT
T ss_pred CcCCCCCCCccCCHHHHHHHHHh
Confidence 48999999999999999999875
No 188
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.94 E-value=6 Score=27.87 Aligned_cols=23 Identities=17% Similarity=0.580 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQRV 34 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGGG
T ss_pred CcCCCCcCchhCCHHHHHHHHHH
Confidence 58999999999999999999874
No 189
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=53.41 E-value=4.3 Score=27.82 Aligned_cols=22 Identities=18% Similarity=0.483 Sum_probs=20.1
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.+...++.|.+
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~ 32 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQR 32 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHhh
Confidence 4899999999999999999975
No 190
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=53.26 E-value=6 Score=27.71 Aligned_cols=23 Identities=22% Similarity=0.479 Sum_probs=21.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQRS 34 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGGG
T ss_pred ceECCCCCchhCCHHHHHHHHHH
Confidence 48999999999999999999874
No 191
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=53.15 E-value=7.7 Score=24.63 Aligned_cols=23 Identities=17% Similarity=0.550 Sum_probs=20.1
Q ss_pred ccccc--ccccccCCHHHHHhhccc
Q 005932 78 RWTCN--TCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~--~C~~~F~~~~~qr~H~kS 100 (669)
.+.|. .|+..|.....++.|.+.
T Consensus 2 p~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred CcCCcCCCCCcccCCHhHHHHHHHH
Confidence 36797 999999999999999875
No 192
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.91 E-value=4.3 Score=27.10 Aligned_cols=22 Identities=23% Similarity=0.373 Sum_probs=19.7
Q ss_pred cccccccccccCCH-HHHHhhcc
Q 005932 78 RWTCNTCKTEFESL-QDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~-~~qr~H~k 99 (669)
.+.|..|+..|... ..++.|.+
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H~~ 31 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRHIW 31 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHHHH
T ss_pred CeECCCCChhhccCHHHHHHHHH
Confidence 48999999999998 89999875
No 193
>1vq8_U 50S ribosomal protein L24E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.39.1.6 PDB: 1giy_R 1jj2_T 1k73_V* 1k8a_V* 1k9m_V* 1kc8_V* 1kd1_V* 1kqs_T* 1m1k_V* 1m90_V* 1ml5_r* 1n8r_V* 1nji_V* 1q7y_V* 1q81_V* 1q82_V* 1q86_V* 1qvf_T 1qvg_T 1s72_U* ...
Probab=52.91 E-value=5.5 Score=32.75 Aligned_cols=34 Identities=21% Similarity=0.553 Sum_probs=26.5
Q ss_pred ccccccccCCCCC--CCceecc---ccccChHHHHHHHH
Q 005932 631 INCSCCGASLAGK--VPFHRYN---YKYCSTSCMHVHRE 664 (669)
Q Consensus 631 ~rC~~Cg~sl~gk--vPF~yl~---~~fCSt~Cl~~Hr~ 664 (669)
..|++||..|-+= +.|=+.| |.|||..|-..+..
T Consensus 4 ~~C~Fcg~~IyPG~G~~~Vr~Dgkvf~FcssKc~k~f~~ 42 (66)
T 1vq8_U 4 RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADL 42 (66)
T ss_dssp CBCTTTCCBCCSSCCEEEECTTSCEEEESCHHHHHHHHT
T ss_pred eEecCcCCcccCCCceEEEeeCCcEEEEECHHHHHHHHc
Confidence 4799999987532 4777776 88999999988754
No 194
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.86 E-value=4.4 Score=28.46 Aligned_cols=23 Identities=17% Similarity=0.466 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eor_A 12 PYNCEECGKAFIHDSQLQEHQRI 34 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH
T ss_pred CccCCCCCCCcCCHHHHHHHHHh
Confidence 48999999999999999999764
No 195
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.49 E-value=5.1 Score=28.25 Aligned_cols=23 Identities=22% Similarity=0.507 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHERI 34 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHTT
T ss_pred CEECcCCCCcCCCHHHHHHHHHH
Confidence 48999999999999999999874
No 196
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=52.37 E-value=6.4 Score=27.58 Aligned_cols=23 Identities=17% Similarity=0.405 Sum_probs=21.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQRV 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG
T ss_pred CeECCccccccCChHHHHHHHHH
Confidence 58999999999999999999874
No 197
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.21 E-value=6.1 Score=27.94 Aligned_cols=23 Identities=17% Similarity=0.313 Sum_probs=20.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eom_A 12 GHRCSDCGKFFLQASNFIQHRRI 34 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CcCCCCCCCeeCChHHHHHHHHH
Confidence 58999999999999999999763
No 198
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.11 E-value=6.2 Score=27.73 Aligned_cols=23 Identities=22% Similarity=0.450 Sum_probs=21.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRI 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCchhCChHHHHHHHhh
Confidence 58999999999999999999874
No 199
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.06 E-value=5.5 Score=27.35 Aligned_cols=22 Identities=27% Similarity=0.684 Sum_probs=20.3
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.....++.|.+
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~ 32 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVL 32 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTH
T ss_pred CEeCCCcChhhCCHHHHHHHHH
Confidence 4899999999999999999976
No 200
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.76 E-value=7.3 Score=27.30 Aligned_cols=22 Identities=18% Similarity=0.490 Sum_probs=20.4
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.....++.|.+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~ 33 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWR 33 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHT
T ss_pred CEECCccCchhCChHHHHHHhH
Confidence 4899999999999999999987
No 201
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.69 E-value=6.3 Score=27.70 Aligned_cols=23 Identities=17% Similarity=0.384 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eq0_A 12 PYKCHECGKVFRRNSHLARHQLI 34 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHTT
T ss_pred CeECCCCCchhCCHHHHHHHHHH
Confidence 48999999999999999999874
No 202
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.67 E-value=5.3 Score=26.91 Aligned_cols=20 Identities=15% Similarity=0.353 Sum_probs=18.5
Q ss_pred cccccccccccCCHHHHHhh
Q 005932 78 RWTCNTCKTEFESLQDQRSH 97 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H 97 (669)
.+.|..|+..|.....++.|
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H 28 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRH 28 (37)
T ss_dssp EEECSSSSCEEECHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHH
Confidence 48999999999999999988
No 203
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.45 E-value=5.6 Score=27.75 Aligned_cols=23 Identities=17% Similarity=0.215 Sum_probs=20.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eou_A 12 TSECQECGKIFRHSSLLIEHQAL 34 (44)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 48999999999999999999763
No 204
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.42 E-value=6.4 Score=27.72 Aligned_cols=23 Identities=17% Similarity=0.400 Sum_probs=21.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em5_A 12 SHQCHECGRGFTLKSHLNQHQRI 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCcCCCccCCHHHHHHHHHH
Confidence 58999999999999999999875
No 205
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=51.40 E-value=4.8 Score=28.41 Aligned_cols=23 Identities=17% Similarity=0.471 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQRI 34 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH
T ss_pred CEECCCCCcccCCHHHHHHHHHH
Confidence 58999999999999999999763
No 206
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=51.34 E-value=6.3 Score=27.69 Aligned_cols=23 Identities=30% Similarity=0.595 Sum_probs=21.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKI 34 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTG
T ss_pred CcCCCCCcchhCCHHHHHHHHHh
Confidence 58999999999999999999875
No 207
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.30 E-value=6.4 Score=27.73 Aligned_cols=23 Identities=17% Similarity=0.573 Sum_probs=20.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKRV 34 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CcCCCCcCchhCCHHHHHHHHHH
Confidence 48999999999999999999763
No 208
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=51.29 E-value=5.3 Score=29.23 Aligned_cols=25 Identities=24% Similarity=0.583 Sum_probs=21.4
Q ss_pred ccccccccccccCCHHHHHhhcccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKSD 101 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kSd 101 (669)
..+.|..|+..|.+...++.|.++-
T Consensus 28 ~~~~C~~C~~~f~~~~~l~~H~~~h 52 (57)
T 1bbo_A 28 RPYHCTYCNFSFKTKGNLTKHMKSK 52 (57)
T ss_dssp CCEECSSSSCEESSHHHHHHHHHSS
T ss_pred CCccCCCCCchhcCHHHHHHHHHHh
Confidence 3589999999999999999998754
No 209
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.15 E-value=5.9 Score=27.63 Aligned_cols=23 Identities=22% Similarity=0.517 Sum_probs=20.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~ 32 (43)
T 2yrm_A 10 AFFCNECDCRFSEEASLKRHTLQ 32 (43)
T ss_dssp CBCCSSSCCCBSSHHHHHHHHHH
T ss_pred CEECCCCCCeeCChHHHHHHHHh
Confidence 48999999999999999999764
No 210
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.08 E-value=6 Score=27.73 Aligned_cols=23 Identities=17% Similarity=0.388 Sum_probs=20.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHERL 34 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHHH
T ss_pred CeECCCCCCccCchHHHHHHHHh
Confidence 48999999999999999999764
No 211
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.05 E-value=6.3 Score=27.62 Aligned_cols=23 Identities=22% Similarity=0.505 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQRI 34 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHGG
T ss_pred CeECCCcChhhCCHHHHHHHHHH
Confidence 58999999999999999999863
No 212
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.90 E-value=5 Score=28.25 Aligned_cols=23 Identities=22% Similarity=0.557 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQHQKT 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 48999999999999999999764
No 213
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.81 E-value=6 Score=27.75 Aligned_cols=23 Identities=17% Similarity=0.505 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQRI 34 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHTT
T ss_pred CccCCCCCCccCChHHHHHHHHH
Confidence 58999999999999999999774
No 214
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=50.77 E-value=5.3 Score=28.99 Aligned_cols=22 Identities=14% Similarity=0.602 Sum_probs=19.8
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.....++.|.+
T Consensus 7 p~~C~~C~k~F~~~~~L~~H~~ 28 (48)
T 3iuf_A 7 PYACDICGKRYKNRPGLSYHYA 28 (48)
T ss_dssp CEECTTTCCEESSHHHHHHHHH
T ss_pred CEECCCcCcccCCHHHHHHHhh
Confidence 4799999999999999998876
No 215
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.71 E-value=5.9 Score=27.86 Aligned_cols=23 Identities=17% Similarity=0.475 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep2_A 12 PYECSICGKSFTKKSQLHVHQQI 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT
T ss_pred CcCCCCCCcccCCHHHHHHHHHH
Confidence 58999999999999999999764
No 216
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=50.65 E-value=7.1 Score=24.93 Aligned_cols=23 Identities=30% Similarity=0.596 Sum_probs=20.4
Q ss_pred ccccc--ccccccCCHHHHHhhccc
Q 005932 78 RWTCN--TCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~--~C~~~F~~~~~qr~H~kS 100 (669)
.+.|. .|+..|.....++.|.++
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~ 27 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKS 27 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHH
Confidence 47899 899999999999999875
No 217
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.57 E-value=6.2 Score=27.63 Aligned_cols=22 Identities=27% Similarity=0.542 Sum_probs=20.2
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.+...++.|.+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSRLRIHQK 33 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHH
T ss_pred CccCCccChhhCCHHHHHHHHH
Confidence 4899999999999999999976
No 218
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.42 E-value=7.9 Score=29.97 Aligned_cols=25 Identities=24% Similarity=0.462 Sum_probs=22.4
Q ss_pred ccccccccccccccCCHHHHHhhcc
Q 005932 75 ALTRWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 75 ~~~~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.++.+.|..|++.|.-...+|.|.|
T Consensus 9 ~~~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 9 DGGRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp CSSCCCCTTTCCCCSSHHHHHHHHH
T ss_pred cCCceeCCcccccccchHHHHhhhh
Confidence 3467899999999999999999987
No 219
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.32 E-value=5.1 Score=28.11 Aligned_cols=23 Identities=22% Similarity=0.530 Sum_probs=20.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIHQAT 34 (46)
T ss_dssp CEECTTSCCEESSHHHHHHHHHH
T ss_pred CeeccccCChhcCHHHHHHHHHH
Confidence 48999999999999999999763
No 220
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=50.23 E-value=7.4 Score=26.84 Aligned_cols=22 Identities=14% Similarity=0.463 Sum_probs=20.3
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|.....|...+..||.
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp CEECTTSSCEESSHHHHHHHHH
T ss_pred cccCccccccCcChHHHHHHHH
Confidence 5799999999999999999985
No 221
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.21 E-value=6.7 Score=27.56 Aligned_cols=23 Identities=22% Similarity=0.515 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQRI 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG
T ss_pred CeeCCCcCCccCCHHHHHHHHHH
Confidence 48999999999999999999874
No 222
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.20 E-value=5.2 Score=28.24 Aligned_cols=23 Identities=22% Similarity=0.514 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIHQQS 34 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CEECcccCCccCCHhHHHHHHHH
Confidence 48999999999999999999764
No 223
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.19 E-value=6.3 Score=27.68 Aligned_cols=23 Identities=22% Similarity=0.487 Sum_probs=21.1
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKV 34 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHh
Confidence 58999999999999999999875
No 224
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.12 E-value=6.9 Score=27.40 Aligned_cols=23 Identities=26% Similarity=0.547 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQRV 34 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHTT
T ss_pred CeECCCcCcccCCHHHHHHHHHH
Confidence 48999999999999999999864
No 225
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.71 E-value=6.9 Score=27.40 Aligned_cols=23 Identities=17% Similarity=0.443 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQRI 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG
T ss_pred CeECCCCChhhCCHHHHHHHHHh
Confidence 58999999999999999999763
No 226
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.53 E-value=4.8 Score=28.41 Aligned_cols=23 Identities=22% Similarity=0.583 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHLRV 34 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHHHH
T ss_pred CeECcccChhhCCHHHHHHHHHH
Confidence 48999999999999999999764
No 227
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.53 E-value=5.4 Score=27.77 Aligned_cols=23 Identities=22% Similarity=0.473 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.++
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~ 32 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQT 32 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 48999999999999999999764
No 228
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.47 E-value=6.3 Score=27.67 Aligned_cols=23 Identities=17% Similarity=0.407 Sum_probs=20.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSMV 34 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CcCCCcCCchhCCHHHHHHHHHH
Confidence 58999999999999999999763
No 229
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=49.38 E-value=6.8 Score=27.58 Aligned_cols=23 Identities=17% Similarity=0.488 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRV 34 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHH
T ss_pred ceECCCCCchhCCHHHHHHHHHH
Confidence 48999999999999999999763
No 230
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=49.37 E-value=7 Score=27.52 Aligned_cols=23 Identities=17% Similarity=0.468 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQRM 34 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHGG
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 58999999999999999999875
No 231
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.22 E-value=6.8 Score=27.49 Aligned_cols=23 Identities=22% Similarity=0.544 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQRV 34 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGGG
T ss_pred CeeCCCCCcccCCHHHHHHHHHH
Confidence 48999999999999999999864
No 232
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=49.17 E-value=9.4 Score=30.27 Aligned_cols=36 Identities=22% Similarity=0.396 Sum_probs=31.6
Q ss_pred cccccccccccCCHHHHHhhcccchhhhhhhhhhcC
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKSDVHRFNVKLTIAG 113 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kSdwHryNlKrkl~g 113 (669)
..-|..|++.|..+-..++|.=|-=|.-+||--+.+
T Consensus 13 ~~eC~lC~vkYs~r~slqDHIFs~qHI~~vk~~v~~ 48 (55)
T 2yrk_A 13 KPECTLCGVKYSARLSIRDHIFSKQHISKVRETVGS 48 (55)
T ss_dssp CSCCTTTTCCCCSSSCHHHHHTSHHHHHHHHHTTCS
T ss_pred CccccccCcccccccchhhhhccHHHHHHHHHHHHh
Confidence 458999999999999999999999999999955443
No 233
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.05 E-value=6.5 Score=27.70 Aligned_cols=23 Identities=22% Similarity=0.564 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emz_A 12 PFKCNECGKGFGRRSHLAGHLRL 34 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 58999999999999999999763
No 234
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.96 E-value=7.4 Score=27.30 Aligned_cols=24 Identities=17% Similarity=0.457 Sum_probs=21.3
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.....++.|.+.
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep0_A 11 KPYKCDVCHKSFRYGSSLTVHQRI 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHTT
T ss_pred CCeeCcccCcccCChHHHHHHHHH
Confidence 358999999999999999999874
No 235
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.88 E-value=5.6 Score=28.06 Aligned_cols=23 Identities=22% Similarity=0.498 Sum_probs=20.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICHRRS 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHh
Confidence 48999999999999999999763
No 236
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=48.70 E-value=7.4 Score=27.62 Aligned_cols=21 Identities=29% Similarity=0.583 Sum_probs=19.5
Q ss_pred cccccccccccCCHHHHHhhc
Q 005932 78 RWTCNTCKTEFESLQDQRSHF 98 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~ 98 (669)
.+.|..|+..|.....++.|.
T Consensus 8 p~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 8 RFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCEETTTTEECSCHHHHHHHH
T ss_pred CeECCCCCCccCCHhHccCcC
Confidence 589999999999999999996
No 237
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.39 E-value=8.6 Score=27.04 Aligned_cols=24 Identities=17% Similarity=0.517 Sum_probs=21.4
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.+...++.|.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytt_A 11 KPYQCSECGKSFSGSYRLTQHWIT 34 (46)
T ss_dssp CTTCCSSSCCCCSSHHHHHHHHTH
T ss_pred CCeeCCCCCcccCCHHHHHHHHHH
Confidence 358999999999999999999875
No 238
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.33 E-value=6.8 Score=27.65 Aligned_cols=23 Identities=17% Similarity=0.421 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL 34 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH
T ss_pred CcCCCCCCchhCCHHHHHHHHHH
Confidence 48999999999999999999764
No 239
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=48.32 E-value=2.4 Score=27.82 Aligned_cols=23 Identities=22% Similarity=0.573 Sum_probs=19.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 2 p~~C~~C~k~f~~~~~L~~H~~~ 24 (32)
T 2kfq_A 2 AFACPACPKRFMRSDALSKHIKT 24 (32)
T ss_dssp CSSSSSSCTTHHHHHTTSSSTTS
T ss_pred CCCCCCCCcccCCHHHHHHHHHH
Confidence 36899999999988888888764
No 240
>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens}
Probab=48.11 E-value=11 Score=28.62 Aligned_cols=32 Identities=25% Similarity=0.606 Sum_probs=22.0
Q ss_pred CccccccccCCCCCCCceeccccccChHHHHHH
Q 005932 630 DINCSCCGASLAGKVPFHRYNYKYCSTSCMHVH 662 (669)
Q Consensus 630 ~~rC~~Cg~sl~gkvPF~yl~~~fCSt~Cl~~H 662 (669)
...|-+||.. --+.-|-.-.=+|||+.|-+..
T Consensus 6 ~~~CE~CG~~-g~~~~F~~ksKRFCS~~Carry 37 (43)
T 2w0t_A 6 PAVCEMCGIV-GTREAFFSKTKRFCSVSCSRSY 37 (43)
T ss_dssp EEECTTTCCE-EETTTSCTTTSSSSSHHHHHHH
T ss_pred eehhhhhcCc-chhhhhccCCcceechhhhCcc
Confidence 4589999973 1112454456789999998764
No 241
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.04 E-value=6.5 Score=27.63 Aligned_cols=23 Identities=13% Similarity=0.460 Sum_probs=20.8
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQRV 34 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGGG
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 58999999999999999999764
No 242
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.99 E-value=5.8 Score=27.87 Aligned_cols=22 Identities=23% Similarity=0.537 Sum_probs=20.3
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.....++.|.+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQK 33 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHH
T ss_pred CcCCCCCCchhCCHHHHHHHHH
Confidence 5899999999999999999976
No 243
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.92 E-value=5.9 Score=27.85 Aligned_cols=23 Identities=22% Similarity=0.524 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRT 34 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CcCCCCCCcccCcHHHHHHHHHH
Confidence 58999999999999999999775
No 244
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.81 E-value=5.9 Score=27.83 Aligned_cols=23 Identities=22% Similarity=0.442 Sum_probs=20.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQKI 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCChhhCCHHHHHHHHHH
Confidence 58999999999999999999763
No 245
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.70 E-value=4.3 Score=28.33 Aligned_cols=23 Identities=26% Similarity=0.583 Sum_probs=20.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2eox_A 12 SYNCNECGKAFTRIFHLTRHQKI 34 (44)
T ss_dssp CEEETTTTEEESSSHHHHTTHHH
T ss_pred CeECcccCcccCCHHHHHHHHHH
Confidence 48999999999999999999763
No 246
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.45 E-value=5.2 Score=28.16 Aligned_cols=23 Identities=22% Similarity=0.489 Sum_probs=20.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKHLRS 34 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH
T ss_pred CeeCcccChhhCCHHHHHHHHHH
Confidence 48999999999999999999763
No 247
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=47.39 E-value=7.5 Score=23.85 Aligned_cols=22 Identities=23% Similarity=0.584 Sum_probs=19.8
Q ss_pred cccc--ccccccCCHHHHHhhccc
Q 005932 79 WTCN--TCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 79 ~~C~--~C~~~F~~~~~qr~H~kS 100 (669)
+.|. .|+..|.+...++.|.+.
T Consensus 3 ~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 3 YVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp EEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCcCCcCcCccCCHHHHHHHHHH
Confidence 6899 999999999999999764
No 248
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=47.14 E-value=5.9 Score=27.90 Aligned_cols=23 Identities=22% Similarity=0.452 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKL 34 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHH
T ss_pred CcccCccCcccCCHHHHHHHHHH
Confidence 58999999999999999999764
No 249
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.13 E-value=6.1 Score=27.82 Aligned_cols=23 Identities=26% Similarity=0.589 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR 34 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CEEccccCcccCCHHHHHHHHHH
Confidence 48999999999999999999764
No 250
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=46.52 E-value=7 Score=28.78 Aligned_cols=24 Identities=21% Similarity=0.408 Sum_probs=21.0
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.....++.|.+.
T Consensus 23 k~~~C~~C~k~f~~~~~L~~H~~~ 46 (54)
T 1yui_A 23 QPATCPICYAVIRQSRNLRRHLEL 46 (54)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCccCCCCCcccCCHHHHHHHHHH
Confidence 358999999999999999999763
No 251
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.52 E-value=6.4 Score=27.65 Aligned_cols=23 Identities=26% Similarity=0.508 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQRS 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CcCCCCCCCcCCChHHHHHHHHH
Confidence 48999999999999999999764
No 252
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.40 E-value=6.2 Score=27.44 Aligned_cols=23 Identities=17% Similarity=0.449 Sum_probs=20.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHERT 34 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHHHH
T ss_pred CeECCCCCchhCCHHHHHHHhHh
Confidence 48999999999999999999763
No 253
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.32 E-value=6.5 Score=27.71 Aligned_cols=24 Identities=17% Similarity=0.414 Sum_probs=21.2
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.....++.|.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em8_A 11 KPYKCVECGKGYKRRLDLDFHQRV 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCeECcccCchhCCHHHHHHHHHH
Confidence 358999999999999999999774
No 254
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.91 E-value=7.4 Score=27.37 Aligned_cols=23 Identities=22% Similarity=0.544 Sum_probs=20.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLRI 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CEECCcCCchhCCHHHHHHHHHH
Confidence 58999999999999999999763
No 255
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=45.73 E-value=8 Score=28.25 Aligned_cols=22 Identities=14% Similarity=0.530 Sum_probs=20.0
Q ss_pred ccccccccccCCHHHHHhhccc
Q 005932 79 WTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 79 ~~C~~C~~~F~~~~~qr~H~kS 100 (669)
+.|..|+..|.+...++.|.+.
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~ 23 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT 23 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH
T ss_pred CcCCCCcCcCCCHHHHHHHHHh
Confidence 6899999999999999999864
No 256
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.56 E-value=7.6 Score=27.16 Aligned_cols=23 Identities=22% Similarity=0.398 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRI 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CeeCCCCChhhCCHHHHHHHHHH
Confidence 48999999999999999999763
No 257
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=45.10 E-value=7 Score=27.37 Aligned_cols=23 Identities=22% Similarity=0.569 Sum_probs=20.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~ 32 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRS 32 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHHH
Confidence 58999999999999999999764
No 258
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.90 E-value=7 Score=27.43 Aligned_cols=22 Identities=23% Similarity=0.655 Sum_probs=20.2
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.....++.|.+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWR 33 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH
T ss_pred CEeCCcCCCccCCHHHHHHHHH
Confidence 5899999999999999999976
No 259
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=44.81 E-value=7.9 Score=32.20 Aligned_cols=13 Identities=31% Similarity=0.884 Sum_probs=11.0
Q ss_pred ccccccccCCCCC
Q 005932 631 INCSCCGASLAGK 643 (669)
Q Consensus 631 ~rC~~Cg~sl~gk 643 (669)
.|||.||..|.-+
T Consensus 5 VRCFTCGkvi~~~ 17 (70)
T 1twf_J 5 VRCFSCGKVVGDK 17 (70)
T ss_dssp SBCTTTCCBCTTC
T ss_pred eecCCCCCChHHH
Confidence 5999999998764
No 260
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.55 E-value=8.2 Score=27.05 Aligned_cols=23 Identities=22% Similarity=0.505 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQVI 34 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHHH
T ss_pred CeECCCCCchhCCHHHHHHHHHH
Confidence 48999999999999999999763
No 261
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.12 E-value=6.3 Score=27.62 Aligned_cols=23 Identities=17% Similarity=0.327 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRT 34 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH
T ss_pred CeeCCCCCCccCCHHHHHHHHHH
Confidence 48999999999999999999764
No 262
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=44.00 E-value=10 Score=28.05 Aligned_cols=23 Identities=22% Similarity=0.745 Sum_probs=19.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~ 24 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS 24 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT
T ss_pred cCcCCCCccccCCHHHHHHHHHH
Confidence 36899999999999999988875
No 263
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.93 E-value=7.4 Score=27.30 Aligned_cols=23 Identities=17% Similarity=0.499 Sum_probs=20.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRRI 34 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCCCeeCChHHHHHHHHH
Confidence 48999999999999999999763
No 264
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.93 E-value=6.6 Score=27.57 Aligned_cols=23 Identities=22% Similarity=0.527 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2en6_A 12 PYGCNECGKTFSQKSILSAHQRT 34 (46)
T ss_dssp CEEETTTTEEESSHHHHHHHHHH
T ss_pred CeECCCCCcccCchHHHHHHHHH
Confidence 58999999999999999999764
No 265
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=43.55 E-value=12 Score=29.24 Aligned_cols=31 Identities=29% Similarity=0.660 Sum_probs=24.2
Q ss_pred CccccccccCCCCCCCceeccccccChHHHH
Q 005932 630 DINCSCCGASLAGKVPFHRYNYKYCSTSCMH 660 (669)
Q Consensus 630 ~~rC~~Cg~sl~gkvPF~yl~~~fCSt~Cl~ 660 (669)
--+|..|+..|.|..=|...+--||...|-+
T Consensus 32 CF~C~~C~~~L~~~~f~~~~g~~yC~~~C~~ 62 (65)
T 2iyb_E 32 CFLCSCCSKCLIGQKFMPVEGMVFCSVECKK 62 (65)
T ss_dssp TSBCTTTCCBCTTSCCEEETTEEESSHHHHH
T ss_pred CEECCCCCCcCCCCceEEECCEEecCHHHhh
Confidence 3578899999999744566677899999864
No 266
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=43.53 E-value=8.8 Score=27.99 Aligned_cols=23 Identities=22% Similarity=0.384 Sum_probs=19.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~ 26 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRT 26 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHH
T ss_pred CccCCCCcchhCChHHHHHHHHH
Confidence 47899999999999999999764
No 267
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=43.45 E-value=13 Score=26.48 Aligned_cols=24 Identities=21% Similarity=0.403 Sum_probs=21.3
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.+...++.|.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (48)
T 2epr_A 11 KQVACEICGKIFRDVYHLNRHKLS 34 (48)
T ss_dssp CSEEETTTTEEESSHHHHHHHGGG
T ss_pred cCeeCCCCCcccCCHHHHHHHHHh
Confidence 358999999999999999999774
No 268
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.88 E-value=7 Score=27.43 Aligned_cols=22 Identities=23% Similarity=0.529 Sum_probs=20.2
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.....++.|.+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRR 33 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTH
T ss_pred CeECCcCCchhCCHHHHHHHHH
Confidence 4899999999999999999976
No 269
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=42.52 E-value=10 Score=29.25 Aligned_cols=23 Identities=17% Similarity=0.606 Sum_probs=18.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.++
T Consensus 49 ~~~C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 49 PFQCRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CEECTTTCCEESCHHHHHHHHTT
T ss_pred CeECCCCCchhCCHHHHHHHHHh
Confidence 47888888888888888888764
No 270
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=42.45 E-value=7.9 Score=29.27 Aligned_cols=24 Identities=25% Similarity=0.524 Sum_probs=20.3
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.+...++.|.+.
T Consensus 39 ~~~~C~~C~k~f~~~~~L~~H~~~ 62 (66)
T 2drp_A 39 KVYPCPFCFKEFTRKDNMTAHVKI 62 (66)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHH
T ss_pred cCeECCCCCCccCCHHHHHHHHHH
Confidence 358899999999999999988764
No 271
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.12 E-value=9.1 Score=26.80 Aligned_cols=23 Identities=17% Similarity=0.239 Sum_probs=20.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQVL 34 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH
T ss_pred CEEccccChhhCCHHHHHHHHHH
Confidence 48999999999999999999763
No 272
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=42.11 E-value=18 Score=30.44 Aligned_cols=27 Identities=22% Similarity=0.535 Sum_probs=20.5
Q ss_pred CCccccccccCCCCCCCce-eccccccCh
Q 005932 629 TDINCSCCGASLAGKVPFH-RYNYKYCST 656 (669)
Q Consensus 629 ~~~rC~~Cg~sl~gkvPF~-yl~~~fCSt 656 (669)
..+||+.|+.- .|.+||. +-...||+.
T Consensus 24 ~~nRC~~CrKk-vgL~gf~CrCg~~FCs~ 51 (74)
T 1wfl_A 24 KKNRCFMCRKK-VGLTGFDCRCGNLFCGL 51 (74)
T ss_dssp CTTBCSSSCCB-CGGGCEECTTSCEECSS
T ss_pred cCCcChhhCCc-ccccCeecCCCCEechh
Confidence 45799999986 4567886 478888884
No 273
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=42.01 E-value=8.4 Score=30.64 Aligned_cols=12 Identities=25% Similarity=0.955 Sum_probs=9.9
Q ss_pred ccccccccCCCC
Q 005932 631 INCSCCGASLAG 642 (669)
Q Consensus 631 ~rC~~Cg~sl~g 642 (669)
.|||.||+.|..
T Consensus 4 VRCFTCGkvi~~ 15 (55)
T 1ef4_A 4 VRCLSCGKPVSA 15 (55)
T ss_dssp SSCSCTTSCCHH
T ss_pred eecCCCCCChhH
Confidence 599999988754
No 274
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=41.97 E-value=9.4 Score=31.58 Aligned_cols=25 Identities=28% Similarity=0.703 Sum_probs=17.9
Q ss_pred CccccccccCCCCCCCcee----ccccccChHHHH
Q 005932 630 DINCSCCGASLAGKVPFHR----YNYKYCSTSCMH 660 (669)
Q Consensus 630 ~~rC~~Cg~sl~gkvPF~y----l~~~fCSt~Cl~ 660 (669)
...|-.||.. |.+ -...|||.+|=.
T Consensus 9 ~~~CP~Cgkp------~~W~~~~~~rPFCSeRCr~ 37 (68)
T 1lv3_A 9 TVNCPTCGKT------VVWGEISPFRPFCSKRCQL 37 (68)
T ss_dssp EEECTTTCCE------EECSSSSSCCSSSSHHHHH
T ss_pred cCcCCCCCCc------ccccccCCCCcccCHHHHh
Confidence 3589999965 442 345899999954
No 275
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=41.02 E-value=11 Score=29.38 Aligned_cols=23 Identities=22% Similarity=0.508 Sum_probs=20.4
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 32 p~~C~~C~k~F~~~~~L~~H~~~ 54 (60)
T 4gzn_C 32 PRSCPECGKCFRDQSEVNRHLKV 54 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHGGG
T ss_pred CeECCCCCCCcCCHHHHHHHhCc
Confidence 58999999999999999999873
No 276
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=39.42 E-value=15 Score=28.17 Aligned_cols=23 Identities=22% Similarity=0.297 Sum_probs=18.0
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~ 31 (70)
T 1x5w_A 9 PEKCSECSYSCSSKAALRIHERI 31 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHGG
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 47788888888888888888765
No 277
>4ayb_N DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_N 2y0s_N 2waq_N 4b1o_N 4b1p_O 2pmz_N 3hkz_N
Probab=39.14 E-value=9.5 Score=31.40 Aligned_cols=13 Identities=46% Similarity=0.976 Sum_probs=10.9
Q ss_pred ccccccccCCCCC
Q 005932 631 INCSCCGASLAGK 643 (669)
Q Consensus 631 ~rC~~Cg~sl~gk 643 (669)
.|||.||+.|.-|
T Consensus 5 VRCFTCGkvi~~k 17 (66)
T 4ayb_N 5 IRCFTCGSLIADK 17 (66)
T ss_dssp SBCTTTCCBCHHH
T ss_pred cccCCCcHhHHHH
Confidence 5999999998654
No 278
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=39.01 E-value=9.6 Score=27.78 Aligned_cols=23 Identities=17% Similarity=0.447 Sum_probs=20.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 32 ~~~C~~C~~~f~~~~~l~~H~~~ 54 (57)
T 3uk3_C 32 PYKCEFCEYAAAQKTSLRYHLER 54 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH
T ss_pred CcCCCCCcchhCCHHHHHHHHHH
Confidence 48999999999999999999764
No 279
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=38.03 E-value=15 Score=28.48 Aligned_cols=23 Identities=22% Similarity=0.553 Sum_probs=19.0
Q ss_pred ccccccccccccCCHHHHHhhcc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~k 99 (669)
..+.|..|+..|.+...++.|.+
T Consensus 16 ~~~~C~~C~k~f~~~~~l~~H~~ 38 (74)
T 2lce_A 16 KPYKCDRCQASFRYKGNLASHKT 38 (74)
T ss_dssp CSBCCTTSSCCBSCHHHHHHHHH
T ss_pred CCeECCCCCceeCCHHHHHHHHH
Confidence 45789999999988888888875
No 280
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=37.77 E-value=21 Score=27.96 Aligned_cols=33 Identities=24% Similarity=0.555 Sum_probs=22.4
Q ss_pred CCCCccccccccCCCCCCCceec----cccccChHHHHHHHH
Q 005932 627 LATDINCSCCGASLAGKVPFHRY----NYKYCSTSCMHVHRE 664 (669)
Q Consensus 627 ~~~~~rC~~Cg~sl~gkvPF~yl----~~~fCSt~Cl~~Hr~ 664 (669)
......|..||.. .+.+- .-.|||..|-..|-+
T Consensus 12 ~~~~~~C~~C~~~-----~~~~Cs~C~~v~YCs~~CQ~~~W~ 48 (60)
T 2dj8_A 12 EDSSESCWNCGRK-----ASETCSGCNTARYCGSFCQHKDWE 48 (60)
T ss_dssp CCCSCCCSSSCSC-----CCEECTTTSCCEESSHHHHHHTHH
T ss_pred CCCCcccccCCCC-----CcccCCCCCCEeeeCHHHHHHHHH
Confidence 3456799999972 23332 357999999877654
No 281
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=37.62 E-value=20 Score=28.91 Aligned_cols=24 Identities=17% Similarity=0.508 Sum_probs=20.8
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.+...++.|.+.
T Consensus 7 ~~~~C~~C~~~f~~~~~l~~H~~~ 30 (96)
T 2dmd_A 7 GPHKCEVCGKCFSRKDKLKTHMRC 30 (96)
T ss_dssp CCCCBTTTTBCCCCHHHHHHHGGG
T ss_pred cCeECCCCCCccCCHHHHHHHHHh
Confidence 458899999999999999999873
No 282
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=37.21 E-value=14 Score=29.78 Aligned_cols=24 Identities=21% Similarity=0.375 Sum_probs=21.2
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.....++.|.+.
T Consensus 12 kpy~C~~CgK~F~~~s~L~~H~r~ 35 (66)
T 2epp_A 12 GILPCGLCGKVFTDANRLRQHEAQ 35 (66)
T ss_dssp CCCCCTTTCCCCSCHHHHHHHHHH
T ss_pred cCcCCCCCCCccCCHHHHHhhhhh
Confidence 358999999999999999999874
No 283
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=36.80 E-value=33 Score=28.81 Aligned_cols=28 Identities=29% Similarity=0.684 Sum_probs=20.0
Q ss_pred CCCccccccccCCCCCCCce-eccccccCh
Q 005932 628 ATDINCSCCGASLAGKVPFH-RYNYKYCST 656 (669)
Q Consensus 628 ~~~~rC~~Cg~sl~gkvPF~-yl~~~fCSt 656 (669)
...+||+.|++- .|.+||. |-...||+.
T Consensus 23 ~~~~RC~~C~kk-vgL~~f~CrCg~~FCs~ 51 (74)
T 1wfp_A 23 STATRCLSCNKK-VGVTGFKCRCGSTFCGT 51 (74)
T ss_dssp CCCCBCSSSCCB-CTTTCEECTTSCEECTT
T ss_pred ccCccchhhcCc-ccccceEeccCCEeccc
Confidence 346799999977 4556776 466778873
No 284
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=36.78 E-value=11 Score=40.95 Aligned_cols=35 Identities=29% Similarity=0.444 Sum_probs=30.3
Q ss_pred cccccccccc------ccCCHHHHHhhcccchhhhhhhhhh
Q 005932 77 TRWTCNTCKT------EFESLQDQRSHFKSDVHRFNVKLTI 111 (669)
Q Consensus 77 ~~~~C~~C~~------~F~~~~~qr~H~kSdwHryNlKrkl 111 (669)
..++|-+|+. .+-...+...|.||-=|++|+|++-
T Consensus 359 ~~~~Ce~C~~~~~~~~~~~ge~~W~~H~ksr~Hk~~~~~~~ 399 (409)
T 3eph_A 359 THYTCNVCRNADGKNVVAIGEKYWKIHLGSRRHKSNLKRNT 399 (409)
T ss_dssp CEEEEEEEECTTSCEEEEESHHHHHHHHTSHHHHHHHHHHH
T ss_pred cceeCCCCCCCCCCcceEEcHHHHHHHhhhhHHHHHHHHHH
Confidence 4568999987 6888899999999999999999753
No 285
>1jjd_A Metallothionein, SMTA; zinc finger, zinc cluster, metal binding PR; NMR {Synechococcus elongatus} SCOP: g.46.1.1
Probab=36.74 E-value=13 Score=29.43 Aligned_cols=33 Identities=24% Similarity=0.544 Sum_probs=30.0
Q ss_pred cccccccCCCCCCCceeccccccChHHHHHHHH
Q 005932 632 NCSCCGASLAGKVPFHRYNYKYCSTSCMHVHRE 664 (669)
Q Consensus 632 rC~~Cg~sl~gkvPF~yl~~~fCSt~Cl~~Hr~ 664 (669)
-|..|+..+..+-.+.+-.-.|||-.|...|..
T Consensus 9 aC~~C~c~Vs~~eai~~dGK~YCSe~Ca~gH~~ 41 (55)
T 1jjd_A 9 ACEPCLCNVDPSKAIDRNGLYYCSEACADGHTG 41 (55)
T ss_dssp SSTTCCCCBCTTTSEESSSCEESSHHHHHTSCS
T ss_pred cCCCCeeEechHHhhhcCCeEEehHHHHccCCC
Confidence 589999999998899999999999999999853
No 286
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=36.31 E-value=14 Score=27.21 Aligned_cols=23 Identities=17% Similarity=0.414 Sum_probs=20.4
Q ss_pred ccccccccccccCCHHHHHhhcc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~k 99 (669)
..+.|..|+..|.+...++.|.+
T Consensus 29 ~~~~C~~C~~~f~~~~~l~~H~~ 51 (60)
T 2adr_A 29 KPYPCGLCNRAFTRRDLLIRHAQ 51 (60)
T ss_dssp CSEECTTTCCEESSHHHHHHHHT
T ss_pred CCccCCCCCCccCCHHHHHHHHH
Confidence 35899999999999999999964
No 287
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.07 E-value=12 Score=28.88 Aligned_cols=22 Identities=18% Similarity=0.454 Sum_probs=19.2
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.+...++.|.+
T Consensus 42 ~~~C~~C~~~f~~~~~L~~H~~ 63 (72)
T 1x6e_A 42 PYKCLECGKAFSQNSGLINHQR 63 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHH
Confidence 4789999999999999998876
No 288
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=36.02 E-value=11 Score=29.20 Aligned_cols=24 Identities=21% Similarity=0.628 Sum_probs=21.1
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.....++.|.+.
T Consensus 44 ~~~~C~~C~k~f~~~~~L~~H~~~ 67 (74)
T 2lce_A 44 KPYRCNICGAQFNRPANLKTHTRI 67 (74)
T ss_dssp CSEECTTTCCEESCHHHHHHHHHH
T ss_pred CCEECCCCCchhCCHHHHHHHHHh
Confidence 358999999999999999999763
No 289
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=35.97 E-value=15 Score=28.69 Aligned_cols=23 Identities=17% Similarity=0.498 Sum_probs=19.3
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 46 ~~~C~~C~~~f~~~~~L~~H~~~ 68 (77)
T 2cot_A 46 PYKCDECGKAFIQRSHLIGHHRV 68 (77)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG
T ss_pred CeeCCCCCCccCCHHHHHHHHHH
Confidence 47899999999998888888763
No 290
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=35.81 E-value=19 Score=30.42 Aligned_cols=37 Identities=24% Similarity=0.396 Sum_probs=31.9
Q ss_pred ccccccccccc--CCHHHHHhhcccchhhhhhhhhhcCC
Q 005932 78 RWTCNTCKTEF--ESLQDQRSHFKSDVHRFNVKLTIAGK 114 (669)
Q Consensus 78 ~~~C~~C~~~F--~~~~~qr~H~kSdwHryNlKrkl~gl 114 (669)
.+.|-.|++-| ++....+.|-.+--|.-|+++-+...
T Consensus 3 kYyCdYCd~~lt~Ds~s~Rk~H~~G~kH~~nv~~yy~~~ 41 (77)
T 3cw1_L 3 KFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYCKW 41 (77)
T ss_pred CcccccCCceecCCCHHHHHHHHccHHHHHHHHHHHHHH
Confidence 57899999998 45667899999999999999987754
No 291
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=35.42 E-value=12 Score=29.34 Aligned_cols=23 Identities=17% Similarity=0.489 Sum_probs=20.7
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.....++.|.+.
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~~ 26 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRRA 26 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH
T ss_pred CccCCCCCCEeCCHHHHHHHHHH
Confidence 48999999999999999999773
No 292
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=35.05 E-value=11 Score=28.34 Aligned_cols=23 Identities=13% Similarity=0.600 Sum_probs=20.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~ 32 (66)
T 2drp_A 10 TYRCKVCSRVYTHISNFCRHYVT 32 (66)
T ss_dssp EEECTTTCCEESSHHHHHHHHHH
T ss_pred ceECCCCcchhCCHHHHHHHHHH
Confidence 48999999999999999999764
No 293
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=35.04 E-value=36 Score=27.81 Aligned_cols=27 Identities=22% Similarity=0.611 Sum_probs=20.4
Q ss_pred CCccccccccCCCCCCCce-eccccccCh
Q 005932 629 TDINCSCCGASLAGKVPFH-RYNYKYCST 656 (669)
Q Consensus 629 ~~~rC~~Cg~sl~gkvPF~-yl~~~fCSt 656 (669)
..+||+.|+.- .|.+||. +-...||+.
T Consensus 14 ~~~rC~~C~kk-vgl~~f~CrCg~~FC~~ 41 (64)
T 1wfh_A 14 RPNRCTVCRKR-VGLTGFMCRCGTTFCGS 41 (64)
T ss_dssp SCCCCTTTCCC-CCTTCEECSSSCEECTT
T ss_pred cCCcChhhCCc-cCccCEEeecCCEeccc
Confidence 45799999986 4556787 477888874
No 294
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=34.94 E-value=15 Score=30.67 Aligned_cols=25 Identities=24% Similarity=0.438 Sum_probs=21.5
Q ss_pred cccccccccccccCCHHHHHhhccc
Q 005932 76 LTRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 76 ~~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
...+.|..|+..|.+...++.|.+.
T Consensus 26 ~~~h~C~~Cgk~F~~~~~L~~H~~~ 50 (85)
T 2lv2_A 26 AECHLCPVCGESFASKGAQERHLRL 50 (85)
T ss_dssp CTTEECTTSCCEESSHHHHHHHHHT
T ss_pred CCCEECCCCCCCcCcHHHHhhhhhh
Confidence 3457899999999999999999874
No 295
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=34.82 E-value=21 Score=29.71 Aligned_cols=24 Identities=25% Similarity=0.463 Sum_probs=17.7
Q ss_pred cccccccccccCCHHHHHhhcccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKSD 101 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kSd 101 (669)
.+.|..|+..|.+...++.|.++-
T Consensus 65 ~~~C~~C~~~f~~~~~l~~H~~~~ 88 (110)
T 2csh_A 65 PYECNICAKRFMWRDSFHRHVTSC 88 (110)
T ss_dssp CEECSSSCCEESCHHHHHHHHHHH
T ss_pred CeeCCCCcchhcCHHHHHHHHHHc
Confidence 467888888887777777777653
No 296
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=34.79 E-value=13 Score=28.53 Aligned_cols=23 Identities=22% Similarity=0.534 Sum_probs=20.6
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~~~ 59 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHMKK 59 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH
T ss_pred CEeCCCCCCccCCHHHHHHHHHH
Confidence 48999999999999999999763
No 297
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=34.79 E-value=14 Score=28.65 Aligned_cols=24 Identities=17% Similarity=0.347 Sum_probs=21.5
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.+...++.|.+.
T Consensus 13 k~~~C~~C~k~f~~~~~L~~H~~~ 36 (72)
T 1x6e_A 13 KPYGCVECGKAFSRSSILVQHQRV 36 (72)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHG
T ss_pred CCccCCCCCCccCCHHHHHHHHHh
Confidence 358999999999999999999874
No 298
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=34.56 E-value=16 Score=29.57 Aligned_cols=24 Identities=17% Similarity=0.429 Sum_probs=20.3
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.+...++.|.+.
T Consensus 63 ~~~~C~~C~~~f~~~~~l~~H~~~ 86 (96)
T 2dmd_A 63 RPFKCQICPYASRNSSQLTVHLRS 86 (96)
T ss_dssp CCEECSSSSCEESSHHHHHHHHTT
T ss_pred CCccCCCCCCccCCHHHHHHHHHH
Confidence 358899999999999999999874
No 299
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=33.99 E-value=18 Score=26.46 Aligned_cols=23 Identities=22% Similarity=0.601 Sum_probs=20.4
Q ss_pred ccccccccccccCCHHHHHhhcc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~k 99 (669)
..+.|..|+..|.....++.|.+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (54)
T 2eps_A 11 KPYICQSCGKGFSRPDHLNGHIK 33 (54)
T ss_dssp CCEECSSSCCEESSHHHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHHHH
Confidence 35899999999999999999975
No 300
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.11 E-value=21 Score=27.80 Aligned_cols=24 Identities=25% Similarity=0.668 Sum_probs=21.6
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.+...++.|.+.
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~ 40 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRT 40 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTT
T ss_pred CCEECCCCCcccCCHHHHHHHHHH
Confidence 458999999999999999999875
No 301
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=32.83 E-value=13 Score=28.84 Aligned_cols=24 Identities=17% Similarity=0.451 Sum_probs=19.5
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.+...++.|.+.
T Consensus 56 ~~~~C~~C~~~f~~~~~l~~H~~~ 79 (82)
T 2kmk_A 56 KPHKCQVCGKAFSQSSNLITHSRK 79 (82)
T ss_dssp CCEECTTTSCEESSHHHHHHHHHH
T ss_pred CCCcCCCcchhhCChHHHHHHHHh
Confidence 357899999999998888888763
No 302
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=32.41 E-value=15 Score=24.52 Aligned_cols=23 Identities=17% Similarity=0.524 Sum_probs=19.9
Q ss_pred cccccc--cccccCCHHHHHhhccc
Q 005932 78 RWTCNT--CKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~--C~~~F~~~~~qr~H~kS 100 (669)
.+.|.. |+..|.....++.|.+.
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 478995 99999999999999763
No 303
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=31.99 E-value=18 Score=28.76 Aligned_cols=24 Identities=21% Similarity=0.631 Sum_probs=20.1
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.+...++.|.+.
T Consensus 61 ~~~~C~~C~~~f~~~~~l~~H~~~ 84 (90)
T 1a1h_A 61 KPFACDICGRKFARSDERKRHTKI 84 (90)
T ss_dssp CCEECTTTCCEESSHHHHHHHHGG
T ss_pred CCccCCCCCchhCCHHHHHHHHHH
Confidence 357899999999999999998874
No 304
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.01 E-value=17 Score=28.44 Aligned_cols=23 Identities=26% Similarity=0.579 Sum_probs=19.4
Q ss_pred ccccccccccccCCHHHHHhhcc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~k 99 (669)
..+.|..|+..|.....++.|.+
T Consensus 37 ~~~~C~~C~k~f~~~~~L~~H~~ 59 (78)
T 2d9h_A 37 LRFPCEFCGKRFEKPDSVAAHRS 59 (78)
T ss_dssp CCEECTTTCCEESSHHHHHHHHH
T ss_pred cccCCCCCCchhCCHHHHHHHHH
Confidence 35889999999999988888864
No 305
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.80 E-value=17 Score=28.39 Aligned_cols=23 Identities=22% Similarity=0.576 Sum_probs=19.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 45 ~~~C~~C~~~f~~~~~L~~H~~~ 67 (77)
T 2ct1_A 45 KFHCPHCDTVIARKSDLGVHLRK 67 (77)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH
T ss_pred ccCCCCCCCccCCHHHHHHHHHH
Confidence 58899999999999988888763
No 306
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.68 E-value=17 Score=28.33 Aligned_cols=23 Identities=17% Similarity=0.508 Sum_probs=20.5
Q ss_pred ccccccccccccCCHHHHHhhcc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~k 99 (669)
..+.|..|+..|.+...++.|.+
T Consensus 14 k~~~C~~C~k~f~~~~~L~~H~~ 36 (77)
T 2ct1_A 14 KPYECYICHARFTQSGTMKMHIL 36 (77)
T ss_dssp CSEECTTTCCEESCHHHHHHHHH
T ss_pred CCeECCCcCchhCCHHHHHHHHH
Confidence 35899999999999999999975
No 307
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.68 E-value=19 Score=25.60 Aligned_cols=22 Identities=23% Similarity=0.415 Sum_probs=19.7
Q ss_pred cccccc--cccccCCHHHHHhhcc
Q 005932 78 RWTCNT--CKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~--C~~~F~~~~~qr~H~k 99 (669)
.+.|.. |+..|.....++.|.+
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r 32 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLK 32 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHH
Confidence 489986 9999999999999976
No 308
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=30.62 E-value=20 Score=28.80 Aligned_cols=23 Identities=22% Similarity=0.601 Sum_probs=20.0
Q ss_pred ccccccccccccCCHHHHHhhcc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~k 99 (669)
..+.|..|+..|.+...++.|.+
T Consensus 64 ~~~~C~~C~~~f~~~~~L~~H~~ 86 (95)
T 2yt9_A 64 KPYICQSCGKGFSRPDHLNGHIK 86 (95)
T ss_dssp SSBCCSSSCCCBSSHHHHHHHHH
T ss_pred CceECCCccchhCCHHHHHHHHH
Confidence 45899999999999999999875
No 309
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=30.00 E-value=22 Score=28.13 Aligned_cols=24 Identities=21% Similarity=0.544 Sum_probs=20.1
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.+...++.|.+.
T Consensus 64 ~~~~C~~C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 64 RPFQCQKCDRAFSRSDHLALHMKR 87 (89)
T ss_dssp CCEECSSSSCEESSHHHHHHHGGG
T ss_pred CCccCCCCCcccCCHHHHHHHHHh
Confidence 357899999999999999888774
No 310
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.68 E-value=18 Score=28.21 Aligned_cols=23 Identities=13% Similarity=0.260 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~ 29 (78)
T 2d9h_A 7 GLQCEICGFTCRQKASLNWHQRK 29 (78)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCCCeeCCHHHHHHHHHH
Confidence 58999999999999999999864
No 311
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.59 E-value=19 Score=29.91 Aligned_cols=22 Identities=23% Similarity=0.517 Sum_probs=16.9
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.....++.|.+
T Consensus 54 ~~~C~~C~k~F~~~~~L~~H~~ 75 (98)
T 2gqj_A 54 ALKCQHCRKQFKSKAGLNYHTM 75 (98)
T ss_dssp HHSCSSSCCCCSCHHHHHHHHH
T ss_pred CEECCCCCCccCCHHHHHHHHH
Confidence 4778888888888888877764
No 312
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=27.78 E-value=21 Score=27.71 Aligned_cols=22 Identities=18% Similarity=0.545 Sum_probs=19.0
Q ss_pred ccccccccccCCHHHHHhhccc
Q 005932 79 WTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 79 ~~C~~C~~~F~~~~~qr~H~kS 100 (669)
+.|..|+..|.+...+..|.+.
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~ 23 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLI 23 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHH
T ss_pred ccCCCCcccccCchhHHHHHHH
Confidence 6799999999999999998764
No 313
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=27.67 E-value=22 Score=23.48 Aligned_cols=23 Identities=17% Similarity=0.430 Sum_probs=19.9
Q ss_pred ccccc--ccccccCCHHHHHhhccc
Q 005932 78 RWTCN--TCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~--~C~~~F~~~~~qr~H~kS 100 (669)
.+.|. .|+..|.....++.|.+.
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~~ 30 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKHK 30 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHHH
Confidence 47899 599999999999999763
No 314
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=27.57 E-value=25 Score=28.46 Aligned_cols=23 Identities=22% Similarity=0.576 Sum_probs=20.1
Q ss_pred ccccccccccccCCHHHHHhhcc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~k 99 (669)
..+.|..|+..|.+...++.|.+
T Consensus 74 ~~~~C~~C~~~f~~~~~l~~H~~ 96 (100)
T 2ebt_A 74 KPFQCGVCNRSFSRSDHLALHMK 96 (100)
T ss_dssp CSCBCSSSCCBCSSHHHHHHHHH
T ss_pred CCeECCCCcCccCCHHHHHHHHH
Confidence 45899999999999999999976
No 315
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=26.63 E-value=23 Score=29.64 Aligned_cols=23 Identities=22% Similarity=0.488 Sum_probs=20.6
Q ss_pred ccccccccccccCCHHHHHhhcc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~k 99 (669)
..+.|..|+..|.....++.|.+
T Consensus 55 k~~~C~~C~k~F~~~~~L~~H~~ 77 (85)
T 2lv2_A 55 QVFPCKYCPATFYSSPGLTRHIN 77 (85)
T ss_dssp SSEECTTSSCEESSHHHHHHHHH
T ss_pred CccCCCCCCCEeCCHHHHHHhCc
Confidence 35899999999999999999975
No 316
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=26.47 E-value=21 Score=38.46 Aligned_cols=32 Identities=22% Similarity=0.485 Sum_probs=23.8
Q ss_pred CccccccccCCCCCCCceeccc-cccChHHHHH
Q 005932 630 DINCSCCGASLAGKVPFHRYNY-KYCSTSCMHV 661 (669)
Q Consensus 630 ~~rC~~Cg~sl~gkvPF~yl~~-~fCSt~Cl~~ 661 (669)
..+|..|+....+.++=....+ .|||..|.+.
T Consensus 47 ~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~ 79 (429)
T 3qwp_A 47 GVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKK 79 (429)
T ss_dssp TTBCTTTCCBCSSCEECTTTSCCEESSHHHHHH
T ss_pred CCcCcCCCCcCCCCCcCCCCCCcccCChhhhhh
Confidence 4589999986555555555655 7999999874
No 317
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=26.22 E-value=23 Score=27.75 Aligned_cols=22 Identities=18% Similarity=0.508 Sum_probs=19.2
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.+...++.|.+
T Consensus 47 ~~~C~~C~~~f~~~~~L~~H~~ 68 (86)
T 1x6h_A 47 AFVCSKCGKTFTRRNTMARHAD 68 (86)
T ss_dssp CEECSSSCCEESCHHHHHHHHH
T ss_pred ceECCCCCChhCCHHHHHHHHH
Confidence 5889999999999999988865
No 318
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.36 E-value=30 Score=24.04 Aligned_cols=23 Identities=22% Similarity=0.518 Sum_probs=20.6
Q ss_pred ccccc--ccccccCCHHHHHhhccc
Q 005932 78 RWTCN--TCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~--~C~~~F~~~~~qr~H~kS 100 (669)
.+.|. .|+..|.....++.|.+.
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~ 36 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRS 36 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH
Confidence 58998 899999999999999875
No 319
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=25.26 E-value=26 Score=28.78 Aligned_cols=23 Identities=17% Similarity=0.405 Sum_probs=19.8
Q ss_pred ccccccccccccCCHHHHHhhcc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~k 99 (669)
..+.|..|+..|.+...++.|.+
T Consensus 72 ~~~~C~~C~~~f~~~~~L~~H~~ 94 (106)
T 2ee8_A 72 KPFKCQECGKGFCQSRTLAVHKT 94 (106)
T ss_dssp CTTSCSSSCCCCSSHHHHHHHHH
T ss_pred CCeECCCcCCcccCHHHHHHHHH
Confidence 35889999999999999999875
No 320
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=25.13 E-value=21 Score=28.73 Aligned_cols=24 Identities=21% Similarity=0.387 Sum_probs=20.6
Q ss_pred ccccccccccccCCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
..+.|..|+..|.+...++.|.+.
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~ 29 (95)
T 2yt9_A 6 SGVACEICGKIFRDVYHLNRHKLS 29 (95)
T ss_dssp SCEECSSSCCEESSSHHHHHHHHH
T ss_pred CCeECCCCCCccCChHHHHHHHHh
Confidence 358999999999999999999763
No 321
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.92 E-value=24 Score=29.59 Aligned_cols=25 Identities=36% Similarity=0.563 Sum_probs=21.7
Q ss_pred ccccccccccccCCHHHHHhhcccc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFKSD 101 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~kSd 101 (669)
..+.|..|+..|.+...++.|.+.-
T Consensus 79 ~~~~C~~C~k~f~~~~~L~~H~~~h 103 (115)
T 2dmi_A 79 KVLKCMYCGHSFESLQDLSVHMIKT 103 (115)
T ss_dssp SSCBCSSSCCBCSSHHHHHHHHHHT
T ss_pred cceECCCCCCccCCHHHHHHHHHHh
Confidence 4589999999999999999998653
No 322
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.78 E-value=25 Score=29.12 Aligned_cols=24 Identities=21% Similarity=0.425 Sum_probs=21.5
Q ss_pred ccccccccccccC-CHHHHHhhccc
Q 005932 77 TRWTCNTCKTEFE-SLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F~-~~~~qr~H~kS 100 (669)
..+.|..|+..|. +...++.|.+.
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~~~ 47 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHMEV 47 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHHHH
T ss_pred CCcCCCCCCCChhhhHHHHHHHHHH
Confidence 4689999999999 99999999875
No 323
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=24.58 E-value=37 Score=27.86 Aligned_cols=23 Identities=26% Similarity=0.586 Sum_probs=18.3
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 45 ~~~C~~C~~~f~~~~~l~~H~~~ 67 (106)
T 2ee8_A 45 PYTCDICHKAFRRQDHLRDHRYI 67 (106)
T ss_dssp CCBCSSSCCBCSCHHHHHHHGGG
T ss_pred CcCCCCccchhCCHHHHHHHHHH
Confidence 47888888888888888888764
No 324
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=24.45 E-value=23 Score=28.34 Aligned_cols=23 Identities=17% Similarity=0.606 Sum_probs=17.1
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.++
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~ 25 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRT 25 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHH
Confidence 36788888888888877777663
No 325
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.38 E-value=26 Score=28.23 Aligned_cols=22 Identities=14% Similarity=0.217 Sum_probs=19.9
Q ss_pred ccccccccccCCHHHHHhhccc
Q 005932 79 WTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 79 ~~C~~C~~~F~~~~~qr~H~kS 100 (669)
+.|..|+..|.+...++.|.+.
T Consensus 63 ~~C~~C~k~f~~~~~L~~H~~~ 84 (95)
T 2ej4_A 63 EECPREGKSFKAKYKLVNHIRV 84 (95)
T ss_dssp TTCSSTTCCCSSHHHHHHHHHH
T ss_pred cCCCCCCcccCCHHHHHHHHHh
Confidence 7899999999999999999863
No 326
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=24.27 E-value=26 Score=27.45 Aligned_cols=23 Identities=30% Similarity=0.650 Sum_probs=20.5
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 15 ~~~C~~C~~~f~~~~~l~~H~~~ 37 (86)
T 1x6h_A 15 PYACSHCDKTFRQKQLLDMHFKR 37 (86)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHH
Confidence 48999999999999999999763
No 327
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=23.16 E-value=63 Score=25.26 Aligned_cols=31 Identities=26% Similarity=0.624 Sum_probs=21.3
Q ss_pred CCccccccccCCCCCCCceec----cccccChHHHHHHHH
Q 005932 629 TDINCSCCGASLAGKVPFHRY----NYKYCSTSCMHVHRE 664 (669)
Q Consensus 629 ~~~rC~~Cg~sl~gkvPF~yl----~~~fCSt~Cl~~Hr~ 664 (669)
...+|..||.. .+.+- ...|||..|-..|-+
T Consensus 12 ~~~~C~~C~~~-----~~~~Cs~C~~v~YCs~~CQ~~dW~ 46 (60)
T 2od1_A 12 SSESCWNCGRK-----ASETCSGCNTARYCGSFCQHKDWE 46 (60)
T ss_dssp CSSCCTTTSSC-----CCEECTTTSCCEESSHHHHHHHHH
T ss_pred CCCccccCCCc-----ccccCCCCCCeeecCHHHHHHHHH
Confidence 45689999973 23332 357999999777654
No 328
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=22.56 E-value=31 Score=31.44 Aligned_cols=47 Identities=21% Similarity=0.316 Sum_probs=34.5
Q ss_pred cccccccccccCCHHHHHhhcccchhhhhhhhhhcCCCCCCHHHHHHHh
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKSDVHRFNVKLTIAGKDIVKEEDFEELT 126 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kSdwHryNlKrkl~gl~plse~eFe~~~ 126 (669)
...|-.|...|.+....-.|.|..++ ||+..-.+. --++.=++-+++
T Consensus 15 ~~~CLFCd~~~~s~~~~l~H~k~~H~-FD~~~i~~~-~~LDfY~~IKLI 61 (121)
T 1wir_A 15 HTPCLFCDRLFASAEETFSHCKLEHQ-FNIDSMVHK-HGLEFYGYIKLI 61 (121)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHSSC-CCHHHHHHH-TTCCHHHHHHHH
T ss_pred ceeEecCCCcccCHHHHHHHHHHhcC-CCHHHHHHh-cCCCceEEEEEE
Confidence 47999999999999999999997644 877643322 236666666665
No 329
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=22.44 E-value=35 Score=37.44 Aligned_cols=33 Identities=15% Similarity=0.441 Sum_probs=24.3
Q ss_pred CccccccccCCCCCCCceeccc-cccChHHHHHH
Q 005932 630 DINCSCCGASLAGKVPFHRYNY-KYCSTSCMHVH 662 (669)
Q Consensus 630 ~~rC~~Cg~sl~gkvPF~yl~~-~fCSt~Cl~~H 662 (669)
..+|..|+....+.++-....+ .|||..|.+.|
T Consensus 49 ~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~ 82 (490)
T 3n71_A 49 NFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDA 82 (490)
T ss_dssp TTBCTTTCCBCSCCEECTTTSCCEESSHHHHHHH
T ss_pred CCcCCCCCCCCCCCCCCCCCCCcCcCCHHHhhhh
Confidence 4689999986555556666666 59999998653
No 330
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=22.20 E-value=31 Score=27.29 Aligned_cols=23 Identities=17% Similarity=0.586 Sum_probs=20.8
Q ss_pred ccccccccccccCCHHHHHhhcc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~k 99 (669)
..+.|..|+..|.+...++.|.+
T Consensus 33 ~~~~C~~C~~~f~~~~~l~~H~~ 55 (90)
T 1a1h_A 33 KPFQCRICMRNFSRSDHLTTHIR 55 (90)
T ss_dssp CCEECTTTCCEESCHHHHHHHHH
T ss_pred CCccCCCCCcccCCHHHHHHHHH
Confidence 35899999999999999999986
No 331
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=22.16 E-value=37 Score=28.45 Aligned_cols=23 Identities=26% Similarity=0.433 Sum_probs=20.7
Q ss_pred ccccccccccccCCHHHHHhhcc
Q 005932 77 TRWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 77 ~~~~C~~C~~~F~~~~~qr~H~k 99 (669)
..+.|..|+..|.+...++.|.+
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~ 28 (124)
T 2dlq_A 6 SGVECPTCHKKFLSKYYLKVHNR 28 (124)
T ss_dssp SSCCCTTTCCCCSSHHHHHHHHH
T ss_pred CCCCCCCCCCcCCCHHHHHHHHH
Confidence 35899999999999999999976
No 332
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=22.04 E-value=33 Score=37.08 Aligned_cols=33 Identities=27% Similarity=0.596 Sum_probs=24.2
Q ss_pred CccccccccCCCCCCCceeccc-cccChHHHHHH
Q 005932 630 DINCSCCGASLAGKVPFHRYNY-KYCSTSCMHVH 662 (669)
Q Consensus 630 ~~rC~~Cg~sl~gkvPF~yl~~-~fCSt~Cl~~H 662 (669)
..+|..|+....+.+|=..... .|||..|-+.|
T Consensus 49 ~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~ 82 (433)
T 3qww_A 49 GHHCECCFARKEGLSKCGRCKQAFYCDVECQKED 82 (433)
T ss_dssp TTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHH
T ss_pred CCcCCcccccCCCCCCCCCCcceeecChhhhhhh
Confidence 4689999987655555555554 89999998664
No 333
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=21.90 E-value=39 Score=28.29 Aligned_cols=20 Identities=30% Similarity=0.722 Sum_probs=12.4
Q ss_pred cccccccccccCCHHHHHhh
Q 005932 78 RWTCNTCKTEFESLQDQRSH 97 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H 97 (669)
.+.|..|+..|.....++.|
T Consensus 62 ~~~C~~Cgk~F~~~~~L~~H 81 (96)
T 2ctd_A 62 MFTCHHCGKQLRSLAGMKYH 81 (96)
T ss_dssp CCCCSSSCCCCSSHHHHHHH
T ss_pred CeECCCCCCeeCCHHHHHHH
Confidence 35666666666666666665
No 334
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=21.70 E-value=31 Score=27.57 Aligned_cols=23 Identities=17% Similarity=0.603 Sum_probs=20.9
Q ss_pred cccccccccccCCHHHHHhhccc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFKS 100 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~kS 100 (669)
.+.|..|+..|.+...++.|.+.
T Consensus 31 ~~~C~~C~k~f~~~~~L~~H~~~ 53 (88)
T 1llm_C 31 PFACDICGRKFARSDERKRHRDI 53 (88)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHH
Confidence 58999999999999999999764
No 335
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=21.65 E-value=31 Score=28.92 Aligned_cols=22 Identities=27% Similarity=0.718 Sum_probs=14.0
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.+...++.|.+
T Consensus 94 ~~~C~~C~~~f~~~~~l~~H~~ 115 (124)
T 2dlq_A 94 PYKCSSCSQQFMQKKDLQSHMI 115 (124)
T ss_dssp SEECSSSCCEESSHHHHHHHHH
T ss_pred CccCCCccchhCCHHHHHHHHH
Confidence 3566666666666666666654
No 336
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=21.55 E-value=32 Score=33.99 Aligned_cols=30 Identities=13% Similarity=0.457 Sum_probs=26.0
Q ss_pred cccccccccccccCC-HHHHHhhcccchhhh
Q 005932 76 LTRWTCNTCKTEFES-LQDQRSHFKSDVHRF 105 (669)
Q Consensus 76 ~~~~~C~~C~~~F~~-~~~qr~H~kSdwHry 105 (669)
...+.|..|+..|.+ ...+++|.+.+|...
T Consensus 167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e~~~~ 197 (204)
T 3sp4_A 167 QEDLKCWRCGETFGRHFTKLKAHLQEEYDDW 197 (204)
T ss_dssp GSCCBCTTTCCBCTTCHHHHHHHHHHHHHHH
T ss_pred CCCceeCCCCchhhcccHHHHHHHHHHHHHH
Confidence 557899999999987 999999999888643
No 337
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=21.01 E-value=32 Score=28.55 Aligned_cols=22 Identities=27% Similarity=0.409 Sum_probs=18.2
Q ss_pred cccccccccccCCHHHHHhhcc
Q 005932 78 RWTCNTCKTEFESLQDQRSHFK 99 (669)
Q Consensus 78 ~~~C~~C~~~F~~~~~qr~H~k 99 (669)
.+.|..|+..|.+...++.|.+
T Consensus 69 ~~~C~~C~~~f~~~~~L~~H~~ 90 (107)
T 1wjp_A 69 KLTCLECMRTFKSSFSIWRHQV 90 (107)
T ss_dssp GGEEGGGTEECSSHHHHHHHHH
T ss_pred CccCccccchhCCHHHHHHHHH
Confidence 4788888888888888888875
No 338
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.77 E-value=43 Score=27.56 Aligned_cols=28 Identities=21% Similarity=0.412 Sum_probs=19.0
Q ss_pred CCCccccccccCCCCCCC---ce-eccccccCh
Q 005932 628 ATDINCSCCGASLAGKVP---FH-RYNYKYCST 656 (669)
Q Consensus 628 ~~~~rC~~Cg~sl~gkvP---F~-yl~~~fCSt 656 (669)
...+||+.|+.- .|.+- |. |-.+.||+.
T Consensus 13 ~~~~rC~~C~kk-~gL~~~egf~CrCg~~FC~~ 44 (67)
T 1x4w_A 13 KSRRRCFQCQTK-LELVQQELGSCRCGYVFCML 44 (67)
T ss_dssp SCTTBCSSSCCB-CCHHHHHHHCCSSSCCCCTT
T ss_pred ccCCcchhhCCe-ecccccCceEecCCCEehhc
Confidence 346899999976 44321 43 677888874
No 339
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=20.68 E-value=36 Score=28.49 Aligned_cols=24 Identities=17% Similarity=0.493 Sum_probs=20.7
Q ss_pred cccccccccccc-CCHHHHHhhccc
Q 005932 77 TRWTCNTCKTEF-ESLQDQRSHFKS 100 (669)
Q Consensus 77 ~~~~C~~C~~~F-~~~~~qr~H~kS 100 (669)
..+.|..|+..| .+...++.|.+.
T Consensus 33 ~~~~C~~C~k~F~~~~~~L~~H~~~ 57 (96)
T 2ctd_A 33 GSVSCPTCQAVGRKTIEGLKKHMEN 57 (96)
T ss_dssp SCEECTTTCSCEESSHHHHHHHHHH
T ss_pred CCcCCCCCCCCcccCHHHHHHHHHH
Confidence 358999999999 999999998763
Done!