BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005936
(669 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 109/264 (41%), Positives = 165/264 (62%), Gaps = 16/264 (6%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
++G G +G VY G +L + +A+K++ E+ + H N
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEI--------PERDSRYSQPLHEEIALHKHLKHKN 80
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLL-GKFGPFP--EAVMRTYTKQLLLGLEYLHN 189
IV+YLG+ E + I +E VPGGS+S+LL K+GP E + YTKQ+L GL+YLH+
Sbjct: 81 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140
Query: 190 HGIMHRDIKGANILVDN-KGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ- 247
+ I+HRDIKG N+L++ G +K++DFG SK++A + + ++ GT +MAPE+I +
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT--ETFTGTLQYMAPEIIDKG 198
Query: 248 -TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
G+ +ADIWS+GCT+IEMATGKPP+ + + AA+F +G K HP IPE++S +AK F
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF 258
Query: 307 LLKCLEKEPDLRPTASELLKHPFV 330
+LKC E +PD R A++LL F+
Sbjct: 259 ILKCFEPDPDKRACANDLLVDEFL 282
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/264 (41%), Positives = 165/264 (62%), Gaps = 16/264 (6%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
++G G +G VY G +L + +A+K++ E+ + H N
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEI--------PERDSRYSQPLHEEIALHKHLKHKN 66
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLL-GKFGPFP--EAVMRTYTKQLLLGLEYLHN 189
IV+YLG+ E + I +E VPGGS+S+LL K+GP E + YTKQ+L GL+YLH+
Sbjct: 67 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 126
Query: 190 HGIMHRDIKGANILVDN-KGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ- 247
+ I+HRDIKG N+L++ G +K++DFG SK++A + + ++ GT +MAPE+I +
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT--ETFTGTLQYMAPEIIDKG 184
Query: 248 -TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
G+ +ADIWS+GCT+IEMATGKPP+ + + AA+F +G K HP IPE++S +AK F
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF 244
Query: 307 LLKCLEKEPDLRPTASELLKHPFV 330
+LKC E +PD R A++LL F+
Sbjct: 245 ILKCFEPDPDKRACANDLLVDEFL 268
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 154/286 (53%), Gaps = 22/286 (7%)
Query: 62 MSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
++P W +G GAFG+VY N ++ L A K + + S+E+ +D++
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYMVEIDIL 88
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFG-PFPEAVMRTYTKQL 180
HPNIV+ L E +L IL+EF GG++ +++ + P E+ ++ KQ
Sbjct: 89 ASC----DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQT 144
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWM 240
L L YLH++ I+HRD+K NIL G IKLADFG S + T+ S GTPYWM
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTIQRRDSFIGTPYWM 202
Query: 241 APEVI-----RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPI 295
APEV+ + + Y AD+WS+G T+IEMA +PP + + L I KS PP
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIA--KSEPPT 259
Query: 296 ---PENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
P S KDFL KCLEK D R T S+LL+HPFVT D P+
Sbjct: 260 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPI 305
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 154/272 (56%), Gaps = 14/272 (5%)
Query: 61 KMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXX 120
++ P + K + IG G+FG VY G++ + E++A+K + + E Q I
Sbjct: 14 RVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQ 73
Query: 121 XXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
P I RY G+ + L I++E++ GGS LL K GP E + T +++
Sbjct: 74 CDS-------PYITRYFGSYLKSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREI 125
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWM 240
L GL+YLH+ +HRDIK AN+L+ +G +KLADFG + Q+ + T GTP+WM
Sbjct: 126 LKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPFWM 183
Query: 241 APEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLS 300
APEVI+Q+ + + ADIWS+G T IE+A G+PP + + LF I K+ PP E
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIELAKGEPP-NSDLHPMRVLFLI--PKNSPPTLEGQH 240
Query: 301 VK-AKDFLLKCLEKEPDLRPTASELLKHPFVT 331
K K+F+ CL K+P RPTA ELLKH F+T
Sbjct: 241 SKPFKEFVEACLNKDPRFRPTAKELLKHKFIT 272
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 153/286 (53%), Gaps = 22/286 (7%)
Query: 62 MSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
++P W +G GAFG+VY N ++ L A K + + S+E+ +D++
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYMVEIDIL 88
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFG-PFPEAVMRTYTKQL 180
HPNIV+ L E +L IL+EF GG++ +++ + P E+ ++ KQ
Sbjct: 89 ASC----DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQT 144
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWM 240
L L YLH++ I+HRD+K NIL G IKLADFG S + + S GTPYWM
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXIQRRDSFIGTPYWM 202
Query: 241 APEVI-----RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPI 295
APEV+ + + Y AD+WS+G T+IEMA +PP + + L I KS PP
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIA--KSEPPT 259
Query: 296 ---PENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
P S KDFL KCLEK D R T S+LL+HPFVT D P+
Sbjct: 260 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPI 305
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 155/270 (57%), Gaps = 14/270 (5%)
Query: 62 MSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
M P + K E IG G+FG V+ G++ + +++A+K + + E Q I
Sbjct: 23 MDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 82
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLL 181
P + +Y G+ ++ L I++E++ GGS LL GP E + T +++L
Sbjct: 83 -------DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREIL 134
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
GL+YLH+ +HRDIK AN+L+ G +KLADFG + Q+ + T + GTP+WMA
Sbjct: 135 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMA 192
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE-NLS 300
PEVI+Q+ + ADIWS+G T IE+A G+PP S+ + + LF I K++PP E N S
Sbjct: 193 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP-MKVLFLI--PKNNPPTLEGNYS 249
Query: 301 VKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K+F+ CL KEP RPTA ELLKH F+
Sbjct: 250 KPLKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 156/273 (57%), Gaps = 14/273 (5%)
Query: 59 SVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXX 118
++K P + K E IG G+FG V+ G++ + +++A+K + + E Q I
Sbjct: 15 NLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 74
Query: 119 XXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK 178
P + +Y G+ ++ L I++E++ GGS LL GP E + T +
Sbjct: 75 SQC-------DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILR 126
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY 238
++L GL+YLH+ +HRDIK AN+L+ G +KLADFG + Q+ + T GTP+
Sbjct: 127 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPF 184
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE- 297
WMAPEVI+Q+ + ADIWS+G T IE+A G+PP S+ + + LF I K++PP E
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH-PMKVLFLI--PKNNPPTLEG 241
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
N S K+F+ CL KEP RPTA ELLKH F+
Sbjct: 242 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 152/286 (53%), Gaps = 22/286 (7%)
Query: 62 MSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
++P W +G GAFG+VY N ++ L A K + + S+E+ +D++
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYMVEIDIL 88
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFG-PFPEAVMRTYTKQL 180
HPNIV+ L E +L IL+EF GG++ +++ + P E+ ++ KQ
Sbjct: 89 ASC----DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQT 144
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWM 240
L L YLH++ I+HRD+K NIL G IKLADFG S + + GTPYWM
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXIQRRDXFIGTPYWM 202
Query: 241 APEVI-----RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPI 295
APEV+ + + Y AD+WS+G T+IEMA +PP + + L I KS PP
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIA--KSEPPT 259
Query: 296 ---PENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
P S KDFL KCLEK D R T S+LL+HPFVT D P+
Sbjct: 260 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPI 305
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 155/270 (57%), Gaps = 14/270 (5%)
Query: 62 MSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
+ P + K E IG G+FG V+ G++ + +++A+K + + E Q I
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLL 181
P + +Y G+ ++ L I++E++ GGS LL GP E + T +++L
Sbjct: 63 -------DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREIL 114
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
GL+YLH+ +HRDIK AN+L+ G +KLADFG + Q+ + T + GTP+WMA
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMA 172
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE-NLS 300
PEVI+Q+ + ADIWS+G T IE+A G+PP S+ + + LF I K++PP E N S
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP-MKVLFLI--PKNNPPTLEGNYS 229
Query: 301 VKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K+F+ CL KEP RPTA ELLKH F+
Sbjct: 230 KPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 150/277 (54%), Gaps = 22/277 (7%)
Query: 72 ELIG-CGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
E+IG G FG+VY N ++ L A K + + S+E+ +D++ H
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYMVEIDILASC----DH 66
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFG-PFPEAVMRTYTKQLLLGLEYLHN 189
PNIV+ L E +L IL+EF GG++ +++ + P E+ ++ KQ L L YLH+
Sbjct: 67 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 126
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI---- 245
+ I+HRD+K NIL G IKLADFG S + + S GTPYWMAPEV+
Sbjct: 127 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR-TXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 246 -RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPI---PENLSV 301
+ + Y AD+WS+G T+IEMA +PP + + L I KS PP P S
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIA--KSEPPTLAQPSRWSS 242
Query: 302 KAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
KDFL KCLEK D R T S+LL+HPFVT D P+
Sbjct: 243 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPI 279
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 154/270 (57%), Gaps = 14/270 (5%)
Query: 62 MSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
+ P + K E IG G+FG V+ G++ + +++A+K + + E Q I
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLL 181
P + +Y G+ ++ L I++E++ GGS LL GP E + T +++L
Sbjct: 63 -------DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREIL 114
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
GL+YLH+ +HRDIK AN+L+ G +KLADFG + Q+ + T GTP+WMA
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMA 172
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE-NLS 300
PEVI+Q+ + ADIWS+G T IE+A G+PP S+ + + LF I K++PP E N S
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP-MKVLFLI--PKNNPPTLEGNYS 229
Query: 301 VKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K+F+ CL KEP RPTA ELLKH F+
Sbjct: 230 KPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 154/270 (57%), Gaps = 23/270 (8%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
GEL G GAFG+VY N ++G L A K + S+E+ +D+I H
Sbjct: 25 GEL-GDGAFGKVYKAKNKETGALAAAKVI----ETKSEEELEDYIVEIEILATC----DH 75
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEYLHN 189
P IV+ LG + L I++EF PGG++ +++ + E ++ +Q+L L +LH+
Sbjct: 76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI---- 245
I+HRD+K N+L+ +G I+LADFG S + L T+ S GTPYWMAPEV+
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPEVVMCET 193
Query: 246 -RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPP---IPENLSV 301
+ T + Y ADIWS+G T+IEMA +PP + + L I KS PP P SV
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMAQIEPP-HHELNPMRVLLKIA--KSDPPTLLTPSKWSV 250
Query: 302 KAKDFLLKCLEKEPDLRPTASELLKHPFVT 331
+ +DFL L+K P+ RP+A++LL+HPFV+
Sbjct: 251 EFRDFLKIALDKNPETRPSAAQLLEHPFVS 280
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 154/270 (57%), Gaps = 23/270 (8%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
GEL G GAFG+VY N ++G L A K + S+E+ +D+I H
Sbjct: 17 GEL-GDGAFGKVYKAKNKETGALAAAKVI----ETKSEEELEDYIVEIEILATC----DH 67
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEYLHN 189
P IV+ LG + L I++EF PGG++ +++ + E ++ +Q+L L +LH+
Sbjct: 68 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI---- 245
I+HRD+K N+L+ +G I+LADFG S + L T+ S GTPYWMAPEV+
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPEVVMCET 185
Query: 246 -RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPP---IPENLSV 301
+ T + Y ADIWS+G T+IEMA +PP + + L I KS PP P SV
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMAQIEPP-HHELNPMRVLLKIA--KSDPPTLLTPSKWSV 242
Query: 302 KAKDFLLKCLEKEPDLRPTASELLKHPFVT 331
+ +DFL L+K P+ RP+A++LL+HPFV+
Sbjct: 243 EFRDFLKIALDKNPETRPSAAQLLEHPFVS 272
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 154/269 (57%), Gaps = 14/269 (5%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXX 123
P + K E IG G+FG V+ G++ + +++A+K + + E Q I
Sbjct: 21 PEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 80
Query: 124 XXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLG 183
+ +Y G+ + L I++E++ GGS LL + GPF E + T K++L G
Sbjct: 81 SY-------VTKYYGSYLKGSKLWIIMEYLGGGSALDLL-RAGPFDEFQIATMLKEILKG 132
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPE 243
L+YLH+ +HRDIK AN+L+ +G +KLADFG + Q+ + T + GTP+WMAPE
Sbjct: 133 LDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPE 190
Query: 244 VIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPP-IPENLSVK 302
VI+Q+ + ADIWS+G T IE+A G+PP S + + LF I K++PP + + +
Sbjct: 191 VIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH-PMRVLFLI--PKNNPPTLVGDFTKS 247
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVT 331
K+F+ CL K+P RPTA ELLKH F+
Sbjct: 248 FKEFIDACLNKDPSFRPTAKELLKHKFIV 276
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 151/263 (57%), Gaps = 19/263 (7%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G++G VY ++ ++G+++A+KQV + ++ K P
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIK----------EISIMQQCDSP 84
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLG-KFGPFPEAVMRTYTKQLLLGLEYLHNH 190
++V+Y G+ + L I++E+ GS+S ++ + E + T + L GLEYLH
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGH 250
+HRDIK NIL++ +G KLADFG + Q+ + ++ + GTP+WMAPEVI++ G+
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD--XMAKRNXVIGTPFWMAPEVIQEIGY 202
Query: 251 SYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPI---PENLSVKAKDFL 307
+ ADIWS+G T IEMA GKPP++ + A+F I T PP PE S DF+
Sbjct: 203 NCVADIWSLGITAIEMAEGKPPYA-DIHPMRAIFMIPTNP--PPTFRKPELWSDNFTDFV 259
Query: 308 LKCLEKEPDLRPTASELLKHPFV 330
+CL K P+ R TA++LL+HPFV
Sbjct: 260 KQCLVKSPEQRATATQLLQHPFV 282
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 148/269 (55%), Gaps = 15/269 (5%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXX 123
P ++ + E IG GA G VY M++ +G+ +A++Q+ N + K + I
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRE 73
Query: 124 XXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLG 183
+PNIV YL + + L +++E++ GGS++ ++ + E + ++ L
Sbjct: 74 N----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPE 243
LE+LH++ ++HRDIK NIL+ G +KL DFG Q+ S M GTPYWMAPE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSXMVGTPYWMAPE 186
Query: 244 VIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPI--PENLSV 301
V+ + + DIWS+G IEM G+PP+ + + AL+ I T + P + PE LS
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGT-PELQNPEKLSA 244
Query: 302 KAKDFLLKCLEKEPDLRPTASELLKHPFV 330
+DFL +CLE + + R +A ELL+H F+
Sbjct: 245 IFRDFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 149/269 (55%), Gaps = 15/269 (5%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXX 123
P ++ + E IG GA G VY M++ +G+ +A++Q+ N + K + I
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRE 73
Query: 124 XXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLG 183
+PNIV YL + + L +++E++ GGS++ ++ + E + ++ L
Sbjct: 74 N----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPE 243
LE+LH++ ++HRDIK NIL+ G +KL DFG Q+ S +M GTPYWMAPE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSTMVGTPYWMAPE 186
Query: 244 VIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPI--PENLSV 301
V+ + + DIWS+G IEM G+PP+ + + AL+ I T + P + PE LS
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGT-PELQNPEKLSA 244
Query: 302 KAKDFLLKCLEKEPDLRPTASELLKHPFV 330
+DFL +CL+ + + R +A ELL+H F+
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 148/269 (55%), Gaps = 15/269 (5%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXX 123
P ++ + E IG GA G VY M++ +G+ +A++Q+ N + K + I
Sbjct: 19 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRE 74
Query: 124 XXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLG 183
+PNIV YL + + L +++E++ GGS++ ++ + E + ++ L
Sbjct: 75 N----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 129
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPE 243
LE+LH++ ++HRDIK NIL+ G +KL DFG Q+ S M GTPYWMAPE
Sbjct: 130 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSXMVGTPYWMAPE 187
Query: 244 VIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPI--PENLSV 301
V+ + + DIWS+G IEM G+PP+ + + AL+ I T + P + PE LS
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGT-PELQNPEKLSA 245
Query: 302 KAKDFLLKCLEKEPDLRPTASELLKHPFV 330
+DFL +CLE + + R +A EL++H F+
Sbjct: 246 IFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 148/269 (55%), Gaps = 15/269 (5%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXX 123
P ++ + E IG GA G VY M++ +G+ +A++Q+ N + K + I
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRE 73
Query: 124 XXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLG 183
+PNIV YL + + L +++E++ GGS++ ++ + E + ++ L
Sbjct: 74 N----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPE 243
LE+LH++ ++HRDIK NIL+ G +KL DFG Q+ S M GTPYWMAPE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSEMVGTPYWMAPE 186
Query: 244 VIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPI--PENLSV 301
V+ + + DIWS+G IEM G+PP+ + + AL+ I T + P + PE LS
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGT-PELQNPEKLSA 244
Query: 302 KAKDFLLKCLEKEPDLRPTASELLKHPFV 330
+DFL +CL+ + + R +A ELL+H F+
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 15/269 (5%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXX 123
P ++ + E IG GA G VY M++ +G+ +A++Q+ N + K + I
Sbjct: 19 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRE 74
Query: 124 XXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLG 183
+PNIV YL + + L +++E++ GGS++ ++ + E + ++ L
Sbjct: 75 N----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 129
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPE 243
LE+LH++ ++HR+IK NIL+ G +KL DFG Q+ S +M GTPYWMAPE
Sbjct: 130 LEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSTMVGTPYWMAPE 187
Query: 244 VIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPI--PENLSV 301
V+ + + DIWS+G IEM G+PP+ + + AL+ I T + P + PE LS
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGT-PELQNPEKLSA 245
Query: 302 KAKDFLLKCLEKEPDLRPTASELLKHPFV 330
+DFL +CLE + + R +A EL++H F+
Sbjct: 246 IFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 136/260 (52%), Gaps = 15/260 (5%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G+FG VY ++ + E++A+K++ + S EK QD I HPN
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKL----RHPNT 77
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
++Y G E + +++E+ G + L P E + T L GL YLH+H ++
Sbjct: 78 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 137
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR---QTGH 250
HRD+K NIL+ G +KL DFG++ + ++ A GTPYWMAPEVI + +
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSA------SIMAPANXFVGTPYWMAPEVILAMDEGQY 191
Query: 251 SYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKC 310
D+WS+G T IE+A KPP ++AL+HI +S + S ++F+ C
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNESPALQSGHWSEYFRNFVDSC 250
Query: 311 LEKEPDLRPTASELLKHPFV 330
L+K P RPT+ LLKH FV
Sbjct: 251 LQKIPQDRPTSEVLLKHRFV 270
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 136/260 (52%), Gaps = 15/260 (5%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G+FG VY ++ + E++A+K++ + S EK QD I HPN
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKL----RHPNT 116
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
++Y G E + +++E+ G + L P E + T L GL YLH+H ++
Sbjct: 117 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 176
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR---QTGH 250
HRD+K NIL+ G +KL DFG++ + ++ A GTPYWMAPEVI + +
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSA------SIMAPANXFVGTPYWMAPEVILAMDEGQY 230
Query: 251 SYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKC 310
D+WS+G T IE+A KPP ++AL+HI +S + S ++F+ C
Sbjct: 231 DGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNESPALQSGHWSEYFRNFVDSC 289
Query: 311 LEKEPDLRPTASELLKHPFV 330
L+K P RPT+ LLKH FV
Sbjct: 290 LQKIPQDRPTSEVLLKHRFV 309
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 147/281 (52%), Gaps = 34/281 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG GA V E +A+K++ + EK Q + HP
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRI-------NLEKCQTSMDELLKEIQAMSQCHHP 73
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLG--------KFGPFPEAVMRTYTKQLLLG 183
NIV Y + ++ L ++++ + GGS+ ++ K G E+ + T +++L G
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMK---GTPYWM 240
LEYLH +G +HRD+K NIL+ G +++ADFG S +A ++ K K GTP WM
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 241 APEVIRQT-GHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL 299
APEV+ Q G+ + ADIWS G T IE+ATG P+ +Y + L + T ++ PP E
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYPPMKVL--MLTLQNDPPSLET- 249
Query: 300 SVKAKDFLLK-----------CLEKEPDLRPTASELLKHPF 329
V+ K+ L K CL+K+P+ RPTA+ELL+H F
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 139/272 (51%), Gaps = 24/272 (8%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
EL+G G +G+VY G ++ +G+L A+K + + + + K + ++ H
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS--------HHR 81
Query: 132 NIVRYLGTVRE------EESLNILLEFVPGGSISSLLG--KFGPFPEAVMRTYTKQLLLG 183
NI Y G + ++ L +++EF GS++ L+ K E + +++L G
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPE 243
L +LH H ++HRDIKG N+L+ +KL DFG S Q+ TV + GTPYWMAPE
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR--TVGRRNTFIGTPYWMAPE 199
Query: 244 VIR-----QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEN 298
VI + + +D+WS+G T IEMA G PP + + ALF I + +
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-PMRALFLIPRNPAPRLKSKK 258
Query: 299 LSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
S K + F+ CL K RP +L+KHPF+
Sbjct: 259 WSKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 147/281 (52%), Gaps = 34/281 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG GA V E +A+K++ + EK Q + HP
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRI-------NLEKCQTSMDELLKEIQAMSQCHHP 68
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLG--------KFGPFPEAVMRTYTKQLLLG 183
NIV Y + ++ L ++++ + GGS+ ++ K G E+ + T +++L G
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMK---GTPYWM 240
LEYLH +G +HRD+K NIL+ G +++ADFG S +A ++ K K GTP WM
Sbjct: 129 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 241 APEVIRQT-GHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL 299
APEV+ Q G+ + ADIWS G T IE+ATG P+ +Y + L + T ++ PP E
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYPPMKVL--MLTLQNDPPSLET- 244
Query: 300 SVKAKDFLLK-----------CLEKEPDLRPTASELLKHPF 329
V+ K+ L K CL+K+P+ RPTA+ELL+H F
Sbjct: 245 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 285
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 138/275 (50%), Gaps = 12/275 (4%)
Query: 53 SKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQ 112
K + P + + +R + IG G F VY L G +A+K+V I +K +A
Sbjct: 19 QKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD 78
Query: 113 DHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP----F 168
+HPN+++Y + E+ LNI+LE G +S ++ F
Sbjct: 79 -----CIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI 133
Query: 169 PEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS 228
PE + Y QL LE++H+ +MHRDIK AN+ + G +KL D G + + + +
Sbjct: 134 PERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS--SKTT 191
Query: 229 GAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGT 288
A S+ GTPY+M+PE I + G+++ +DIWS+GC + EMA + P+ + +L
Sbjct: 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE 251
Query: 289 TKSHPPIP-ENLSVKAKDFLLKCLEKEPDLRPTAS 322
+PP+P ++ S + + + C+ +P+ RP +
Sbjct: 252 QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVT 286
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 153/292 (52%), Gaps = 21/292 (7%)
Query: 52 LSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASK 108
++ H+ + + P + +++G G+FG+V++ + DSG L A+K VL A +
Sbjct: 14 ITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMK-VLKKATLKVR 72
Query: 109 EKAQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPF 168
++ + + +HP +V+ + E L ++L+F+ GG + + L K F
Sbjct: 73 DRVRTKMERDILADV-----NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF 127
Query: 169 PEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS 228
E ++ Y +L LGL++LH+ GI++RD+K NIL+D +G IKL DFG SK+ +
Sbjct: 128 TEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHE--K 185
Query: 229 GAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-QQYQEVAALFHIG 287
A S GT +MAPEV+ + GHS+SAD WS G + EM TG P+ + +E L
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL---- 241
Query: 288 TTKSHPPIPENLSVKAKDFLLKCLEKEPDLR-----PTASELLKHPFVTGDD 334
K+ +P+ LS +A+ L ++ P R A E+ +H F + D
Sbjct: 242 ILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTID 293
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 135/260 (51%), Gaps = 17/260 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G+ G V + SG +AVK + + + Q H N+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDL--------RKQQRRELLFNEVVIMRDYQHFNV 104
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
V + E L +L+EF+ GG+++ ++ + E + T + +L L YLH G++
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR-LNEEQIATVCEAVLQALAYLHAQGVI 163
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
HRDIK +IL+ G +KL+DFG Q+++ V K + GTPYWMAPEVI ++ ++
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISK--DVPKRKXLVGTPYWMAPEVISRSLYATE 221
Query: 254 ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEN---LSVKAKDFLLKC 310
DIWS+G VIEM G+PP+ V A+ + S PP +N +S +DFL +
Sbjct: 222 VDIWSLGIMVIEMVDGEPPYFSD-SPVQAMKRL--RDSPPPKLKNSHKVSPVLRDFLERM 278
Query: 311 LEKEPDLRPTASELLKHPFV 330
L ++P R TA ELL HPF+
Sbjct: 279 LVRDPQERATAQELLDHPFL 298
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 92
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPPEMIEGRM 208
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 264
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 265 RLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 30 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 83
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 143
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPPEMIEGRM 199
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 255
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 256 RLLKHNPSQRPMLREVLEHPWITANSSKP 284
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 120/212 (56%), Gaps = 8/212 (3%)
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH-N 189
P IV + G + ++I +E + GGS+ +L K G PE ++ + ++ GL YL
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 142
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
H IMHRD+K +NILV+++G IKL DFG S Q+ + S A S GT +M+PE ++ T
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 198
Query: 250 HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPP--IPENL-SVKAKDF 306
+S +DIWS+G +++EMA G+ P +A + + PP +P + S++ +DF
Sbjct: 199 YSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 258
Query: 307 LLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
+ KCL K P R +L+ H F+ D + V
Sbjct: 259 VNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 290
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 67
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSCH----APSSRRTTLSGTLDYLPPEMIEGRM 183
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 239
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 92
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S + GT ++ PE+I
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRDDLCGTLDYLPPEMIEGRM 208
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 264
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 265 RLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 129/269 (47%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 71
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G + L K F E TY +L L Y H+
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S + GT ++ PE+I
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRXXLXGTLDYLPPEMIEGRM 187
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 243
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 69
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 241
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 71
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G + L K F E TY +L L Y H+
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 243
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 67
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRDTLCGTLDYLPPEMIEGRM 183
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 239
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 66
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 238
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 71
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 243
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 68
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S + GT ++ PE+I
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRXXLCGTLDYLPPEMIEGRM 184
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 240
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 71
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE I
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 243
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 244 RLLKHNPSQRPXLREVLEHPWITANSSKP 272
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 69
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRAALCGTLDYLPPEMIEGRM 185
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 241
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 66
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S + GT ++ PE+I
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTELCGTLDYLPPEMIEGRM 182
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 238
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 67
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S + GT ++ PE+I
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTDLCGTLDYLPPEMIEGRM 183
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 239
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 138/269 (51%), Gaps = 18/269 (6%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQV----LIAANFASKEKAQDHIXXXXXXX 122
R+ +G +G G F + Y ++D+ E+ A K V L+ + KEK I
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH--QKEKMSTEIAIHKSL- 99
Query: 123 XXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL 182
+P++V + G +++ + ++LE S+ L + E R + +Q +
Sbjct: 100 ------DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
G++YLHN+ ++HRD+K N+ +++ +K+ DFG + ++ K++ GTP ++AP
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE--FDGERKKTLCGTPNYIAP 211
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
EV+ + GHS+ DIWS+GC + + GKPP+ + +I K+ +P +++
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET---YIRIKKNEYSVPRHINPV 268
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVT 331
A + + L +P LRP+ +ELL F T
Sbjct: 269 ASALIRRMLHADPTLRPSVAELLTDEFFT 297
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 15/269 (5%)
Query: 72 ELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+++G GA+G+V++ + D+G+L A+K VL A K K +H
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMK-VLKKATIVQKAKTTEHTRTERQVLEHIRQS 118
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
P +V + E L+++L+++ GG + + L + F E ++ Y +++L LE+LH
Sbjct: 119 --PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH 176
Query: 189 NHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR-- 246
GI++RDIK NIL+D+ G + L DFG SK+ T A GT +MAP+++R
Sbjct: 177 KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET-ERAYDFCGTIEYMAPDIVRGG 235
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA-ALFHIGTTKSHPPIPENLSVKAKD 305
+GH + D WS+G + E+ TG P++ ++ + A KS PP P+ +S AKD
Sbjct: 236 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKD 295
Query: 306 FLLKCLEKEPDLR-----PTASELLKHPF 329
+ + L K+P R A E+ +H F
Sbjct: 296 LIQRLLMKDPKKRLGCGPRDADEIKEHLF 324
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 71
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S + GT ++ PE+I
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 243
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 12 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 65
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 125
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 237
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 238 RLLKHNPSQRPMLREVLEHPWITANSSKP 266
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 66
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRAALCGTLDYLPPEMIEGRM 182
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 238
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 137/269 (50%), Gaps = 18/269 (6%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQV----LIAANFASKEKAQDHIXXXXXXX 122
R+ +G +G G F + Y ++D+ E+ A K V L+ + KEK I
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH--QKEKMSTEIAIHKSL- 83
Query: 123 XXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL 182
+P++V + G +++ + ++LE S+ L + E R + +Q +
Sbjct: 84 ------DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 137
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
G++YLHN+ ++HRD+K N+ +++ +K+ DFG + ++ K + GTP ++AP
Sbjct: 138 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE--FDGERKKDLCGTPNYIAP 195
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
EV+ + GHS+ DIWS+GC + + GKPP+ + +I K+ +P +++
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET---YIRIKKNEYSVPRHINPV 252
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVT 331
A + + L +P LRP+ +ELL F T
Sbjct: 253 ASALIRRMLHADPTLRPSVAELLTDEFFT 281
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 66
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S + GT ++ PE+I
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 238
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 66
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S + GT ++ PE+I
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 238
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 132/261 (50%), Gaps = 17/261 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G+ G V + SG+L+AVK++ + + Q H N+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDL--------RKQQRRELLFNEVVIMRDYQHENV 210
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
V + + L +++EF+ GG+++ ++ E + +L L LH G++
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVI 269
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
HRDIK +IL+ + G +KL+DFG QV++ V K + GTPYWMAPE+I + +
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 254 ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL---SVKAKDFLLKC 310
DIWS+G VIEM G+PP+ + E + PP +NL S K FL +
Sbjct: 328 VDIWSLGIMVIEMVDGEPPY---FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 384
Query: 311 LEKEPDLRPTASELLKHPFVT 331
L ++P R TA+ELLKHPF+
Sbjct: 385 LVRDPAQRATAAELLKHPFLA 405
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 137/269 (50%), Gaps = 18/269 (6%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQV----LIAANFASKEKAQDHIXXXXXXX 122
R+ +G +G G F + Y ++D+ E+ A K V L+ + KEK I
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH--QKEKMSTEIAIHKSL- 99
Query: 123 XXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL 182
+P++V + G +++ + ++LE S+ L + E R + +Q +
Sbjct: 100 ------DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
G++YLHN+ ++HRD+K N+ +++ +K+ DFG + ++ K + GTP ++AP
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE--FDGERKKDLCGTPNYIAP 211
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
EV+ + GHS+ DIWS+GC + + GKPP+ + +I K+ +P +++
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET---YIRIKKNEYSVPRHINPV 268
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVT 331
A + + L +P LRP+ +ELL F T
Sbjct: 269 ASALIRRMLHADPTLRPSVAELLTDEFFT 297
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 17 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 70
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 130
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 242
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 243 RLLKHNPSQRPMLREVLEHPWITANSSKP 271
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 137/269 (50%), Gaps = 18/269 (6%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQV----LIAANFASKEKAQDHIXXXXXXX 122
R+ +G +G G F + Y ++D+ E+ A K V L+ + KEK I
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH--QKEKMSTEIAIHKSL- 99
Query: 123 XXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL 182
+P++V + G +++ + ++LE S+ L + E R + +Q +
Sbjct: 100 ------DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
G++YLHN+ ++HRD+K N+ +++ +K+ DFG + ++ K + GTP ++AP
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE--FDGERKKXLCGTPNYIAP 211
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
EV+ + GHS+ DIWS+GC + + GKPP+ + +I K+ +P +++
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET---YIRIKKNEYSVPRHINPV 268
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVT 331
A + + L +P LRP+ +ELL F T
Sbjct: 269 ASALIRRMLHADPTLRPSVAELLTDEFFT 297
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 68
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+A+FG S A S ++ GT ++ PE+I
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSVH----APSSRRTTLCGTLDYLPPEMIEGRM 184
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 240
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 132/269 (49%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ +S +LA+K VL A EKA +H
Sbjct: 13 GRPLGKGKFGNVYLAREKNSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 66
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRAALCGTLDYLPPEMIEGRM 182
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQ+ + ++ P+ ++ A+D +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT----YKRISRVEFTFPDFVTEGARDLIS 238
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 134/260 (51%), Gaps = 17/260 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G+ G V + +G+ +AVK++ + + Q H N+
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDL--------RKQQRRELLFNEVVIMRDYHHDNV 104
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
V + + L +++EF+ GG+++ ++ E + T +L L YLHN G++
Sbjct: 105 VDMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVI 163
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
HRDIK +IL+ + G IKL+DFG QV++ V K + GTPYWMAPEVI + +
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSK--EVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 254 ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL---SVKAKDFLLKC 310
DIWS+G VIEM G+PP+ + + A+ I S PP ++L S + FL
Sbjct: 222 VDIWSLGIMVIEMIDGEPPYFNE-PPLQAMRRI--RDSLPPRVKDLHKVSSVLRGFLDLM 278
Query: 311 LEKEPDLRPTASELLKHPFV 330
L +EP R TA ELL HPF+
Sbjct: 279 LVREPSQRATAQELLGHPFL 298
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 131/242 (54%), Gaps = 18/242 (7%)
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH-N 189
P IV + G + ++I +E + GGS+ +L K G PE ++ + ++ GL YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
H IMHRD+K +NILV+++G IKL DFG S Q+ + S A S GT +M+PE ++ T
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 179
Query: 250 HSYSADIWSVGCTVIEMATGKPPW--------SQQYQEVAALFHIGTTKSHPPIPENL-S 300
+S +DIWS+G +++EMA G+ P S+ + L + P +P + S
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFS 239
Query: 301 VKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASVMKSSEIL----SPSHVA 356
++ +DF+ KCL K P R +L+ H F+ D + V A + S+ L +P+H A
Sbjct: 240 LEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQPSTPTHAA 299
Query: 357 NL 358
+
Sbjct: 300 GV 301
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 66
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S + GT ++ PE+I
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 238
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 66
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S + GT ++ PE+I
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 238
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 69
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S + GT ++ PE+I
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 241
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 69
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+A+FG S A S ++ GT ++ PE+I
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWSVH----APSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 241
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+ L+ P RP E+L+HP++T + P
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 152/292 (52%), Gaps = 21/292 (7%)
Query: 52 LSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASK 108
++ H+ + + P ++ +++G G+FG+V++ + D+ +L A+K VL A +
Sbjct: 10 ITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVR 68
Query: 109 EKAQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPF 168
++ + + +HP IV+ + E L ++L+F+ GG + + L K F
Sbjct: 69 DRVRTKMERDILVEV-----NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF 123
Query: 169 PEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS 228
E ++ Y +L L L++LH+ GI++RD+K NIL+D +G IKL DFG SK+ +
Sbjct: 124 TEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEK 181
Query: 229 GAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-QQYQEVAALFHIG 287
A S GT +MAPEV+ + GH+ SAD WS G + EM TG P+ + +E +
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM---- 237
Query: 288 TTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTA-----SELLKHPFVTGDD 334
K+ +P+ LS +A+ L ++ P R A E+ +H F + D
Sbjct: 238 ILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 135/261 (51%), Gaps = 17/261 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G+ G V + SG+L+AVK++ + + Q H N+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDL--------RKQQRRELLFNEVVIMRDYQHENV 90
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
V + + L +++EF+ GG+++ ++ E + +L L LH G++
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVI 149
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
HRDIK +IL+ + G +KL+DFG QV++ V K + GTPYWMAPE+I + +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 254 ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL---SVKAKDFLLKC 310
DIWS+G VIEM G+PP+ + + A+ I + PP +NL S K FL +
Sbjct: 208 VDIWSLGIMVIEMVDGEPPYFNE-PPLKAMKMI--RDNLPPRLKNLHKVSPSLKGFLDRL 264
Query: 311 LEKEPDLRPTASELLKHPFVT 331
L ++P R TA+ELLKHPF+
Sbjct: 265 LVRDPAQRATAAELLKHPFLA 285
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 135/261 (51%), Gaps = 17/261 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G+ G V + SG+L+AVK++ + + Q H N+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDL--------RKQQRRELLFNEVVIMRDYQHENV 133
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
V + + L +++EF+ GG+++ ++ E + +L L LH G++
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVI 192
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
HRDIK +IL+ + G +KL+DFG QV++ V K + GTPYWMAPE+I + +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 254 ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL---SVKAKDFLLKC 310
DIWS+G VIEM G+PP+ + + A+ I + PP +NL S K FL +
Sbjct: 251 VDIWSLGIMVIEMVDGEPPYFNE-PPLKAMKMI--RDNLPPRLKNLHKVSPSLKGFLDRL 307
Query: 311 LEKEPDLRPTASELLKHPFVT 331
L ++P R TA+ELLKHPF+
Sbjct: 308 LVRDPAQRATAAELLKHPFLA 328
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 130/265 (49%), Gaps = 16/265 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 69
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 241
Query: 309 KCLEKEPDLRPTASELLKHPFVTGD 333
+ L+ P RP E+L+HP++T +
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 135/261 (51%), Gaps = 17/261 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G+ G V + SG+L+AVK++ + + Q H N+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDL--------RKQQRRELLFNEVVIMRDYQHENV 88
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
V + + L +++EF+ GG+++ ++ E + +L L LH G++
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVI 147
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
HRDIK +IL+ + G +KL+DFG QV++ V K + GTPYWMAPE+I + +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 254 ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL---SVKAKDFLLKC 310
DIWS+G VIEM G+PP+ + + A+ I + PP +NL S K FL +
Sbjct: 206 VDIWSLGIMVIEMVDGEPPYFNE-PPLKAMKMI--RDNLPPRLKNLHKVSPSLKGFLDRL 262
Query: 311 LEKEPDLRPTASELLKHPFVT 331
L ++P R TA+ELLKHPF+
Sbjct: 263 LVRDPAQRATAAELLKHPFLA 283
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 135/261 (51%), Gaps = 17/261 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G+ G V + SG+L+AVK++ + + Q H N+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDL--------RKQQRRELLFNEVVIMRDYQHENV 79
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
V + + L +++EF+ GG+++ ++ E + +L L LH G++
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVI 138
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
HRDIK +IL+ + G +KL+DFG QV++ V K + GTPYWMAPE+I + +
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 254 ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL---SVKAKDFLLKC 310
DIWS+G VIEM G+PP+ + + A+ I + PP +NL S K FL +
Sbjct: 197 VDIWSLGIMVIEMVDGEPPYFNE-PPLKAMKMI--RDNLPPRLKNLHKVSPSLKGFLDRL 253
Query: 311 LEKEPDLRPTASELLKHPFVT 331
L ++P R TA+ELLKHPF+
Sbjct: 254 LVRDPAQRATAAELLKHPFLA 274
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 152/292 (52%), Gaps = 21/292 (7%)
Query: 52 LSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASK 108
++ H+ + + P ++ +++G G+FG+V++ + D+ +L A+K VL A +
Sbjct: 11 ITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVR 69
Query: 109 EKAQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPF 168
++ + + +HP IV+ + E L ++L+F+ GG + + L K F
Sbjct: 70 DRVRTKMERDILVEV-----NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF 124
Query: 169 PEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS 228
E ++ Y +L L L++LH+ GI++RD+K NIL+D +G IKL DFG SK+ +
Sbjct: 125 TEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEK 182
Query: 229 GAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-QQYQEVAALFHIG 287
A S GT +MAPEV+ + GH+ SAD WS G + EM TG P+ + +E +
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM---- 238
Query: 288 TTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTA-----SELLKHPFVTGDD 334
K+ +P+ LS +A+ L ++ P R A E+ +H F + D
Sbjct: 239 ILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 290
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 152/292 (52%), Gaps = 21/292 (7%)
Query: 52 LSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASK 108
++ H+ + + P ++ +++G G+FG+V++ + D+ +L A+K VL A +
Sbjct: 10 ITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVR 68
Query: 109 EKAQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPF 168
++ + + +HP IV+ + E L ++L+F+ GG + + L K F
Sbjct: 69 DRVRTKMERDILVEV-----NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF 123
Query: 169 PEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS 228
E ++ Y +L L L++LH+ GI++RD+K NIL+D +G IKL DFG SK+ +
Sbjct: 124 TEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEK 181
Query: 229 GAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-QQYQEVAALFHIG 287
A S GT +MAPEV+ + GH+ SAD WS G + EM TG P+ + +E +
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM---- 237
Query: 288 TTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTA-----SELLKHPFVTGDD 334
K+ +P+ LS +A+ L ++ P R A E+ +H F + D
Sbjct: 238 ILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 129/265 (48%), Gaps = 16/265 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ S +LA+K VL A EKA +H
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 69
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S + GT ++ PE+I
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 241
Query: 309 KCLEKEPDLRPTASELLKHPFVTGD 333
+ L+ P RP E+L+HP++T +
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 135/261 (51%), Gaps = 17/261 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G+ G V + SG+L+AVK++ + + Q H N+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDL--------RKQQRRELLFNEVVIMRDYQHENV 83
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
V + + L +++EF+ GG+++ ++ E + +L L LH G++
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVI 142
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
HRDIK +IL+ + G +KL+DFG QV++ V K + GTPYWMAPE+I + +
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 254 ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL---SVKAKDFLLKC 310
DIWS+G VIEM G+PP+ + + A+ I + PP +NL S K FL +
Sbjct: 201 VDIWSLGIMVIEMVDGEPPYFNE-PPLKAMKMI--RDNLPPRLKNLHKVSPSLKGFLDRL 257
Query: 311 LEKEPDLRPTASELLKHPFVT 331
L ++P R TA+ELLKHPF+
Sbjct: 258 LVRDPAQRATAAELLKHPFLA 278
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH-N 189
P IV + G + ++I +E + GGS+ +L K G PE ++ + ++ GL YL
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 126
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
H IMHRD+K +NILV+++G IKL DFG S Q+ + A GT +M+PE ++ T
Sbjct: 127 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EMANEFVGTRSYMSPERLQGTH 182
Query: 250 HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL-SVKAKDFLL 308
+S +DIWS+G +++EMA G+ P + + L + P +P + S++ +DF+
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYP--RPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVN 240
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASVMKSSEIL----SPSHVA 356
KCL K P R +L+ H F+ D + V A + S+ L +P+H A
Sbjct: 241 KCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQPSTPTHAA 292
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 139/267 (52%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + IG G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G IK+ADFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 129/265 (48%), Gaps = 16/265 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA-QDHIXXXXXXXXXXXXXS 129
G +G G FG VY+ +LA+K VL A EKA +H
Sbjct: 10 GRPLGKGKFGNVYLAREKQRKFILALK-VLFKAQL---EKAGVEH--QLRREVEIQSHLR 63
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R G + + ++LE+ P G++ L K F E TY +L L Y H+
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ PE+I
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 250 HSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
H D+WS+G E GKPP+ + YQE + ++ P+ ++ A+D +
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTEGARDLIS 235
Query: 309 KCLEKEPDLRPTASELLKHPFVTGD 333
+ L+ P RP E+L+HP++T +
Sbjct: 236 RLLKHNPSQRPMLREVLEHPWITAN 260
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 135/267 (50%), Gaps = 15/267 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASK--EKAQDHIXXXXXXXXXX 125
++ G L+G G+F VY ++ +G +A+K + A + + ++ Q+ +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL---- 68
Query: 126 XXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLL-GKFGPFPEAVMRTYTKQLLLGL 184
HP+I+ + + ++LE G ++ L + PF E R + Q++ G+
Sbjct: 69 ---KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125
Query: 185 EYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
YLH+HGI+HRD+ +N+L+ IK+ADFG + Q+ ++ GTP +++PE+
Sbjct: 126 LYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK--MPHEKHYTLCGTPNYISPEI 183
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
++ H +D+WS+GC + G+PP+ + + +P LS++AK
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL---NKVVLADYEMPSFLSIEAK 240
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVT 331
D + + L + P R + S +L HPF++
Sbjct: 241 DLIHQLLRRNPADRLSLSSVLDHPFMS 267
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 139/267 (52%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + IG G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E++PGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G IK+ADFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 139/267 (52%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + IG G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E++PGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G IK+ADFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K SP+ + ++ + +G G+FGRV + + ++G A+K ++ K K
Sbjct: 27 FLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLK 84
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L ++LE+ PGG + S L + G F E
Sbjct: 85 QIEH---TLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSE 141
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G IK+ADFG +K+V
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRT 196
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 253
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 254 -GKVR----FPSHFSSDLKDLLRNLLQ 275
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 139/267 (52%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 27 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 84
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 85 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 196
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
++ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 197 WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 253
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 254 -GKVR----FPSHFSSDLKDLLRNLLQ 275
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 139/267 (52%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 12 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 69
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 70 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 126
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 127 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 181
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
++ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 182 WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 238
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 239 -GKVR----FPSHFSSDLKDLLRNLLQ 260
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 109/200 (54%), Gaps = 10/200 (5%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G+FGRV++ + +G A+K ++ + K +H +HP I
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMK--VLKKEIVVRLKQVEH---TNDERLMLSIVTHPFI 68
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
+R GT ++ + + ++++++ GG + SLL K FP V + Y ++ L LEYLH+ I+
Sbjct: 69 IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDII 128
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
+RD+K NIL+D G IK+ DFG +K V ++ + GTP ++APEV+ ++ S
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFAKYVPDVTY-----XLCGTPDYIAPEVVSTKPYNKS 183
Query: 254 ADIWSVGCTVIEMATGKPPW 273
D WS G + EM G P+
Sbjct: 184 IDWWSFGILIYEMLAGYTPF 203
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 138/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 138/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 151/310 (48%), Gaps = 27/310 (8%)
Query: 62 MSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
M +R +K IG G+FG+ + + + G +K++ I+ +SKE+ +
Sbjct: 23 MEKYVRLQK---IGEGSFGKAILVKSTEDGRQYVIKEINIS-RMSSKEREESR-----RE 73
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG--KFGPFPEAVMRTYTKQ 179
HPNIV+Y + E SL I++++ GG + + K F E + + Q
Sbjct: 74 VAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+ L L+++H+ I+HRDIK NI + G ++L DFG ++ + +TV A++ GTPY+
Sbjct: 134 ICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN--STVELARACIGTPYY 191
Query: 240 MAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL 299
++PE+ ++ +DIW++GC + E+ T K + + L I + S PP+ +
Sbjct: 192 LSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII--SGSFPPVSLHY 249
Query: 300 SVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASVMKSSEILSPSHVANLE 359
S + + + ++ P RP+ + +L+ F+ E + LSP +A
Sbjct: 250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIE------------KFLSPQLIAEEF 297
Query: 360 SLQMLTSPGS 369
L+ + GS
Sbjct: 298 CLKTFSKFGS 307
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 138/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 27 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 84
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 85 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 196
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 253
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 254 -GKVR----FPSHFSSDLKDLLRNLLQ 275
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 134/270 (49%), Gaps = 12/270 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG GAF V +N ++G+ AVK V +A +S + + + HP
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML---KHP 86
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP----FPEAVMRTYTKQLLLGLEYL 187
+IV L T + L ++ EF+ G + + K + EAV Y +Q+L L Y
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 188 HNHGIMHRDIKGANILV---DNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
H++ I+HRD+K N+L+ +N +KL DFG + Q+ E V+G + GTP++MAPEV
Sbjct: 147 HDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV--GTPHFMAPEV 204
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ + D+W G + + +G P+ + + G K +P ++S AK
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAK 264
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDD 334
D + + L +P R T E L HP++ D
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWLKERD 294
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 138/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 138/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 138/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 27 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 84
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 85 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 141
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 196
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 253
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 254 -GKVR----FPSHFSSDLKDLLRNLLQ 275
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 138/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K SP+ + ++ + + +G G+FGRV + + ++G A+K ++ K K
Sbjct: 19 FLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLK 76
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 77 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 133
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 134 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 188
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 189 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 245
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 246 -GKVR----FPSHFSSDLKDLLRNLLQ 267
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K SP+ + ++ + + +G G+FGRV + + ++G A+K ++ K K
Sbjct: 19 FLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLK 76
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 77 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 133
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 134 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 188
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 189 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 245
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 246 -GKVR----FPSHFSSDLKDLLRNLLQ 267
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K SP+ + ++ + + +G G+FGRV + + ++G A+K ++ K K
Sbjct: 27 FLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLK 84
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 85 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 196
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 253
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 254 -GKVR----FPSHFSSDLKDLLRNLLQ 275
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K SP+ + ++ + + +G G+FGRV + + ++G A+K ++ K K
Sbjct: 27 FLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLK 84
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 85 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 196
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 253
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 254 -GKVR----FPSHFSSDLKDLLRNLLQ 275
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K SP+ + ++ + + +G G+FGRV + + ++G A+K ++ K K
Sbjct: 27 FLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLK 84
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 85 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 196
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 253
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 254 -GKVR----FPSHFSSDLKDLLRNLLQ 275
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + + ++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + + ++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + + ++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+ PGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+++D +G IK+ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+ PGG + S L + G F E
Sbjct: 84 EIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+++D +G IK+ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K SP+ + ++ + + +G G+FGRV + + ++G A+K ++ K K
Sbjct: 47 FLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLK 104
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+VPGG + S L + G F E
Sbjct: 105 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 161
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 162 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 216
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 217 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 273
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 274 -GKVR----FPSHFSSDLKDLLRNLLQ 295
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 131/259 (50%), Gaps = 10/259 (3%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
+G G F + + + D+ E+ A K ++ + K ++ + +H +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGK--IVPKSLLLKPHQREKMSMEISIHRSL---AHQH 78
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
+V + G + + + ++LE S+ L + E R Y +Q++LG +YLH + +
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 138
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSY 252
+HRD+K N+ ++ +K+ DFG + +V K++ GTP ++APEV+ + GHS+
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 253 SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLE 312
D+WS+GC + + GKPP+ + ++ K+ IP++++ A + K L+
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKET---YLRIKKNEYSIPKHINPVAASLIQKMLQ 253
Query: 313 KEPDLRPTASELLKHPFVT 331
+P RPT +ELL F T
Sbjct: 254 TDPTARPTINELLNDEFFT 272
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+ PGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+++D +G IK+ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 131/259 (50%), Gaps = 10/259 (3%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
+G G F + + + D+ E+ A K ++ + K ++ + +H +
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGK--IVPKSLLLKPHQREKMSMEISIHRSL---AHQH 82
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
+V + G + + + ++LE S+ L + E R Y +Q++LG +YLH + +
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 142
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSY 252
+HRD+K N+ ++ +K+ DFG + +V K++ GTP ++APEV+ + GHS+
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 253 SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLE 312
D+WS+GC + + GKPP+ + ++ K+ IP++++ A + K L+
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPFETSCLKET---YLRIKKNEYSIPKHINPVAASLIQKMLQ 257
Query: 313 KEPDLRPTASELLKHPFVT 331
+P RPT +ELL F T
Sbjct: 258 TDPTARPTINELLNDEFFT 276
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 131/259 (50%), Gaps = 10/259 (3%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
+G G F + + + D+ E+ A K ++ + K ++ + +H +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGK--IVPKSLLLKPHQREKMSMEISIHRSL---AHQH 78
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
+V + G + + + ++LE S+ L + E R Y +Q++LG +YLH + +
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 138
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSY 252
+HRD+K N+ ++ +K+ DFG + +V K++ GTP ++APEV+ + GHS+
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 253 SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLE 312
D+WS+GC + + GKPP+ + ++ K+ IP++++ A + K L+
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKET---YLRIKKNEYSIPKHINPVAASLIQKMLQ 253
Query: 313 KEPDLRPTASELLKHPFVT 331
+P RPT +ELL F T
Sbjct: 254 TDPTARPTINELLNDEFFT 272
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 135/273 (49%), Gaps = 11/273 (4%)
Query: 58 PSVKMSPPIR-WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIX 116
PS+++ I + +++G G+FG+V++ + + A+K + D
Sbjct: 9 PSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD----DDVEC 64
Query: 117 XXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTY 176
HP + T + +E+L ++E++ GG + + F + Y
Sbjct: 65 TMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY 124
Query: 177 TKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT 236
+++LGL++LH+ GI++RD+K NIL+D G IK+ADFG K+ + + GT
Sbjct: 125 AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE--NMLGDAKTNEFCGT 182
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIP 296
P ++APE++ +++S D WS G + EM G+ P+ Q +E LFH +P P
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFH-SIRMDNPFYP 239
Query: 297 ENLSVKAKDFLLKCLEKEPDLRP-TASELLKHP 328
L +AKD L+K +EP+ R ++ +HP
Sbjct: 240 RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHP 272
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 30/276 (10%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVL--------IAANFASKEKAQDHIXXXXXXX 122
G +G G FG VY+ S +LA+K + + + + Q H+
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL------- 69
Query: 123 XXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL 182
HPNI+R G + + ++LE+ P G++ L K F E TY +L
Sbjct: 70 ------RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
L Y H+ ++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ P
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVH----APSSRRDTLCGTLDYLPP 179
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSV 301
E+I H D+WS+G E G PP+ + YQE + ++ P+ ++
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET----YRRISRVEFTFPDFVTE 235
Query: 302 KAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDP 337
A+D + + L+ R T +E+L+HP++ + P
Sbjct: 236 GARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 30/276 (10%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVL--------IAANFASKEKAQDHIXXXXXXX 122
G +G G FG VY+ S +LA+K + + + + Q H+
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL------- 69
Query: 123 XXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL 182
HPNI+R G + + ++LE+ P G++ L K F E TY +L
Sbjct: 70 ------RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
L Y H+ ++HRDIK N+L+ + G +K+ADFG S A S ++ GT ++ P
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVH----APSSRRTTLCGTLDYLPP 179
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSV 301
E+I H D+WS+G E G PP+ + YQE + ++ P+ ++
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET----YRRISRVEFTFPDFVTE 235
Query: 302 KAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDP 337
A+D + + L+ R T +E+L+HP++ + P
Sbjct: 236 GARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 47 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 104
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 105 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 161
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 162 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GAT 216
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
++ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 217 WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 273
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 274 -GKVR----FPSHFSSDLKDLLRNLLQ 295
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K SP+ + ++ + + +G G+FGRV + + ++G A+K ++ K K
Sbjct: 27 FLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLK 84
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+ PGG + S L + G F E
Sbjct: 85 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+++D +G IK+ DFG +K+V
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRT 196
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 253
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 254 -GKVR----FPSHFSSDLKDLLRNLLQ 275
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 131/261 (50%), Gaps = 20/261 (7%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E IG G+FG V+ G +AVK +L+ +F + + + HP
Sbjct: 43 EKIGAGSFGTVHRAEW--HGSDVAVK-ILMEQDFHA-----ERVNEFLREVAIMKRLRHP 94
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP---FPEAVMRTYTKQLLLGLEYLH 188
NIV ++G V + +L+I+ E++ GS+ LL K G E + + G+ YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 189 NHG--IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
N I+HR++K N+LVD K +K+ DFG S+ A +T +KS GTP WMAPEV+R
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STFLSSKSAAGTPEWMAPEVLR 212
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQ--YQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ +D++S G + E+AT + PW Q VAA +G IP NL+ +
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA---VGFKCKRLEIPRNLNPQVA 269
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ C EP RP+ + ++
Sbjct: 270 AIIEGCWTNEPWKRPSFATIM 290
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 130/259 (50%), Gaps = 10/259 (3%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
+G G F + + + D+ E+ A K ++ + K ++ + +H +
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGK--IVPKSLLLKPHQREKMSMEISIHRSL---AHQH 100
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
+V + G + + + ++LE S+ L + E R Y +Q++LG +YLH + +
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 160
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSY 252
+HRD+K N+ ++ +K+ DFG + +V K + GTP ++APEV+ + GHS+
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 253 SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLE 312
D+WS+GC + + GKPP+ + ++ K+ IP++++ A + K L+
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPFETSCLKET---YLRIKKNEYSIPKHINPVAASLIQKMLQ 275
Query: 313 KEPDLRPTASELLKHPFVT 331
+P RPT +ELL F T
Sbjct: 276 TDPTARPTINELLNDEFFT 294
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 130/259 (50%), Gaps = 10/259 (3%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
+G G F + + + D+ E+ A K ++ + K ++ + +H +
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGK--IVPKSLLLKPHQREKMSMEISIHRSL---AHQH 102
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
+V + G + + + ++LE S+ L + E R Y +Q++LG +YLH + +
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 162
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSY 252
+HRD+K N+ ++ +K+ DFG + +V K + GTP ++APEV+ + GHS+
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 253 SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLE 312
D+WS+GC + + GKPP+ + ++ K+ IP++++ A + K L+
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFETSCLKET---YLRIKKNEYSIPKHINPVAASLIQKMLQ 277
Query: 313 KEPDLRPTASELLKHPFVT 331
+P RPT +ELL F T
Sbjct: 278 TDPTARPTINELLNDEFFT 296
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+ PGG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+++D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 128/258 (49%), Gaps = 10/258 (3%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G+FG+V++ + + A+K + D HP
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD----DDVECTMVEKRVLSLAWEHP 78
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
+ T + +E+L ++E++ GG + + F + Y +++LGL++LH+ G
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHS 251
I++RD+K NIL+D G IK+ADFG K+ + + GTP ++APE++ ++
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKE--NMLGDAKTNXFCGTPDYIAPEILLGQKYN 196
Query: 252 YSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCL 311
+S D WS G + EM G+ P+ Q +E LFH +P P L +AKD L+K
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFH-SIRMDNPFYPRWLEKEAKDLLVKLF 253
Query: 312 EKEPDLRP-TASELLKHP 328
+EP+ R ++ +HP
Sbjct: 254 VREPEKRLGVRGDIRQHP 271
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+ PGG + S L + G F E
Sbjct: 84 EIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+++D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 136/274 (49%), Gaps = 50/274 (18%)
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH-N 189
P IV + G + ++I +E + GGS+ +L K G PE ++ + ++ GL YL
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 185
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
H IMHRD+K +NILV+++G IKL DFG S Q+ + S A S GT +M+PE ++ T
Sbjct: 186 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 241
Query: 250 HSYSADIWSVGCTVIEMATGK----PPWSQQYQEV------------------------- 280
+S +DIWS+G +++EMA G+ PP +++ + +
Sbjct: 242 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 301
Query: 281 --------AALFHIGTTKSHPPIPE----NLSVKAKDFLLKCLEKEPDLRPTASELLKHP 328
A+F + + P P+ S++ +DF+ KCL K P R +L+ H
Sbjct: 302 YGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 361
Query: 329 FVTGDDEDPVLHASVMKSSEIL----SPSHVANL 358
F+ D + V A + S+ L +P+H A +
Sbjct: 362 FIKRSDAEEVDFAGWLCSTIGLNQPSTPTHAAGV 395
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 26 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 27 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 84
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P + + + ++ +L +++E+ PGG + S L + G F E
Sbjct: 85 QIEH---TLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+++D +G IK+ DFG +K+V
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRT 196
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 253
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 254 -GKVR----FPSHFSSDLKDLLRNLLQ 275
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 21 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 78
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 79 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 135
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 136 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 190
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 191 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 247
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 248 -GKVR----FPSHFSSDLKDLLRNLLQ 269
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 27 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 84
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P + + + ++ +L +++E+ PGG + S L + G F E
Sbjct: 85 QIEH---TLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+++D +G IK+ DFG +K+V
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRT 196
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 253
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 254 -GKVR----FPSHFSSDLKDLLRNLLQ 275
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +P+ + ++ + + +G G+FGRV + ++++G A+K ++ K K
Sbjct: 27 FLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLK 84
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P + + + ++ +L +++E+ PGG + S L + G F E
Sbjct: 85 QIEH---TLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE 141
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+++D +G IK+ DFG +K+V
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRT 196
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 253
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 254 -GKVR----FPSHFSSDLKDLLRNLLQ 275
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 130/259 (50%), Gaps = 10/259 (3%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
+G G F + + + D+ E+ A K ++ + K ++ + +H +
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGK--IVPKSLLLKPHQREKMSMEISIHRSL---AHQH 76
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
+V + G + + + ++LE S+ L + E R Y +Q++LG +YLH + +
Sbjct: 77 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 136
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSY 252
+HRD+K N+ ++ +K+ DFG + +V K + GTP ++APEV+ + GHS+
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 253 SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLE 312
D+WS+GC + + GKPP+ + ++ K+ IP++++ A + K L+
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPFETSCLKET---YLRIKKNEYSIPKHINPVAASLIQKMLQ 251
Query: 313 KEPDLRPTASELLKHPFVT 331
+P RPT +ELL F T
Sbjct: 252 TDPTARPTINELLNDEFFT 270
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 136/274 (49%), Gaps = 50/274 (18%)
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH-N 189
P IV + G + ++I +E + GGS+ +L K G PE ++ + ++ GL YL
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
H IMHRD+K +NILV+++G IKL DFG S Q+ + S A S GT +M+PE ++ T
Sbjct: 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 206
Query: 250 HSYSADIWSVGCTVIEMATGK----PPWSQQYQEV------------------------- 280
+S +DIWS+G +++EMA G+ PP +++ + +
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266
Query: 281 --------AALFHIGTTKSHPPIPE----NLSVKAKDFLLKCLEKEPDLRPTASELLKHP 328
A+F + + P P+ S++ +DF+ KCL K P R +L+ H
Sbjct: 267 FGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326
Query: 329 FVTGDDEDPVLHASVMKSSEIL----SPSHVANL 358
F+ D + V A + S+ L +P+H A +
Sbjct: 327 FIKRSDAEEVDFAGWLCSTIGLNQPSTPTHAAGV 360
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 13 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 70
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 71 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 127
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 128 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK-----GRT 182
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 183 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 239
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 240 -GKVR----FPSHFSSDLKDLLRNLLQ 261
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 27 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 84
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 85 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 141
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 196
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 253
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 254 -GKVR----FPSHFSSDLKDLLRNLLQ 275
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 136/274 (49%), Gaps = 50/274 (18%)
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH-N 189
P IV + G + ++I +E + GGS+ +L K G PE ++ + ++ GL YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
H IMHRD+K +NILV+++G IKL DFG S Q+ + S A S GT +M+PE ++ T
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 179
Query: 250 HSYSADIWSVGCTVIEMATGK----PPWSQQYQEV------------------------- 280
+S +DIWS+G +++EMA G+ PP +++ + +
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 281 --------AALFHIGTTKSHPPIPE----NLSVKAKDFLLKCLEKEPDLRPTASELLKHP 328
A+F + + P P+ S++ +DF+ KCL K P R +L+ H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299
Query: 329 FVTGDDEDPVLHASVMKSSEIL----SPSHVANL 358
F+ D + V A + S+ L +P+H A +
Sbjct: 300 FIKRSDAEEVDFAGWLCSTIGLNQPSTPTHAAGV 333
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 47 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 104
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 105 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 161
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 162 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 216
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 217 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 273
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 274 -GKVR----FPSHFSSDLKDLLRNLLQ 295
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 136/274 (49%), Gaps = 50/274 (18%)
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH-N 189
P IV + G + ++I +E + GGS+ +L K G PE ++ + ++ GL YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
H IMHRD+K +NILV+++G IKL DFG S Q+ + S A S GT +M+PE ++ T
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 179
Query: 250 HSYSADIWSVGCTVIEMATGK----PPWSQQYQEV------------------------- 280
+S +DIWS+G +++EMA G+ PP +++ + +
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 281 --------AALFHIGTTKSHPPIPE----NLSVKAKDFLLKCLEKEPDLRPTASELLKHP 328
A+F + + P P+ S++ +DF+ KCL K P R +L+ H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299
Query: 329 FVTGDDEDPVLHASVMKSSEIL----SPSHVANL 358
F+ D + V A + S+ L +P+H A +
Sbjct: 300 FIKRSDAEEVDFAGWLCSTIGLNQPSTPTHAAGV 333
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 128/261 (49%), Gaps = 20/261 (7%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E IG G+FG V+ G +AVK +L+ +F + + + HP
Sbjct: 43 EKIGAGSFGTVHRAEW--HGSDVAVK-ILMEQDFHA-----ERVNEFLREVAIMKRLRHP 94
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP---FPEAVMRTYTKQLLLGLEYLH 188
NIV ++G V + +L+I+ E++ GS+ LL K G E + + G+ YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 189 NHG--IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
N I+HRD+K N+LVD K +K+ DFG S+ A S K GTP WMAPEV+R
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS--KXAAGTPEWMAPEVLR 212
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQ--YQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ +D++S G + E+AT + PW Q VAA +G IP NL+ +
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA---VGFKCKRLEIPRNLNPQVA 269
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ C EP RP+ + ++
Sbjct: 270 AIIEGCWTNEPWKRPSFATIM 290
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 25/270 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G++GR G++L K++ ++ S +A+ + HPNI
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL----DYGSMTEAEKQMLVSEVNLLREL--KHPNI 67
Query: 134 VRYLGTV--REEESLNILLEFVPGGSISSLLGKFGPF-----PEAVMRTYTKQLLLGLEY 186
VRY + R +L I++E+ GG ++S++ K E V+R T QL L L+
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT-QLTLALKE 126
Query: 187 LHN-----HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
H H ++HRD+K AN+ +D K +KL DFG ++ + S AK+ GTPY+M+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DTSFAKTFVGTPYYMS 184
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
PE + + ++ +DIWS+GC + E+ PP++ Q E+A G + IP S
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYRYS 241
Query: 301 VKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + + + L + RP+ E+L++P +
Sbjct: 242 DELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+++D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++APE+I G++ + D W++G + +MA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 25/270 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G++GR G++L K++ ++ S +A+ + HPNI
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL----DYGSMTEAEKQMLVSEVNLLREL--KHPNI 67
Query: 134 VRYLGTV--REEESLNILLEFVPGGSISSLLGKFGPF-----PEAVMRTYTKQLLLGLEY 186
VRY + R +L I++E+ GG ++S++ K E V+R T QL L L+
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT-QLTLALKE 126
Query: 187 LHN-----HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
H H ++HRD+K AN+ +D K +KL DFG ++ + S AK+ GTPY+M+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DTSFAKAFVGTPYYMS 184
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
PE + + ++ +DIWS+GC + E+ PP++ Q E+A G + IP S
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYRYS 241
Query: 301 VKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + + + L + RP+ E+L++P +
Sbjct: 242 DELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 125/250 (50%), Gaps = 46/250 (18%)
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH-N 189
P IV + G + ++I +E + GGS+ +L K G PE ++ + ++ GL YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
H IMHRD+K +NILV+++G IKL DFG S Q+ + S A S GT +M+PE ++ T
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 179
Query: 250 HSYSADIWSVGCTVIEMATGK----PPWSQQYQEV------------------------- 280
+S +DIWS+G +++EMA G+ PP +++ + +
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 281 --------AALFHIGTTKSHPPIPE----NLSVKAKDFLLKCLEKEPDLRPTASELLKHP 328
A+F + + P P+ S++ +DF+ KCL K P R +L+ H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299
Query: 329 FVTGDDEDPV 338
F+ D + V
Sbjct: 300 FIKRSDAEEV 309
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 125/250 (50%), Gaps = 46/250 (18%)
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH-N 189
P IV + G + ++I +E + GGS+ +L K G PE ++ + ++ GL YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
H IMHRD+K +NILV+++G IKL DFG S Q+ + S A S GT +M+PE ++ T
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 179
Query: 250 HSYSADIWSVGCTVIEMATGK----PPWSQQYQEV------------------------- 280
+S +DIWS+G +++EMA G+ PP +++ + +
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 281 --------AALFHIGTTKSHPPIPE----NLSVKAKDFLLKCLEKEPDLRPTASELLKHP 328
A+F + + P P+ S++ +DF+ KCL K P R +L+ H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299
Query: 329 FVTGDDEDPV 338
F+ D + V
Sbjct: 300 FIKRSDAEEV 309
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 135/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP +APE+I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 137/270 (50%), Gaps = 14/270 (5%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFA-SKEKAQDHIXXXXXXXXXXXXXSHPN 132
+G GA G V + + + +A+K ++ FA + D +HP
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
I++ + + E I+LE + GG + + EA + Y Q+LL ++YLH +GI
Sbjct: 77 IIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGI 135
Query: 193 MHRDIKGANILVDNK--GC-IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT- 248
+HRD+K N+L+ ++ C IK+ DFG SK + E S +++ GTP ++APEV+
Sbjct: 136 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVG 192
Query: 249 --GHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSH--PPIPENLSVKAK 304
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S KA
Sbjct: 193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 252
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDD 334
D + K L +P R T E L+HP++ +D
Sbjct: 253 DLVKKLLVVDPKARFTTEEALRHPWLQDED 282
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 137/270 (50%), Gaps = 14/270 (5%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFA-SKEKAQDHIXXXXXXXXXXXXXSHPN 132
+G GA G V + + + +A+K ++ FA + D +HP
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILKKLNHPC 75
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
I++ + + E I+LE + GG + + EA + Y Q+LL ++YLH +GI
Sbjct: 76 IIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGI 134
Query: 193 MHRDIKGANILVDNK--GC-IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT- 248
+HRD+K N+L+ ++ C IK+ DFG SK + E S +++ GTP ++APEV+
Sbjct: 135 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVG 191
Query: 249 --GHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSH--PPIPENLSVKAK 304
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S KA
Sbjct: 192 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 251
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDD 334
D + K L +P R T E L+HP++ +D
Sbjct: 252 DLVKKLLVVDPKARFTTEEALRHPWLQDED 281
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 89
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 90 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A S GT +++PE++ +
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 265
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 135/267 (50%), Gaps = 23/267 (8%)
Query: 51 VLSKHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEK 110
L K +PS + ++ + + +G G+FGRV + + +SG A+K ++ K K
Sbjct: 26 FLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLK 83
Query: 111 AQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE 170
+H + P +V+ + ++ +L +++E+V GG + S L + G F E
Sbjct: 84 QIEH---TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 171 AVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
R Y Q++L EYLH+ +++RD+K N+L+D +G I++ DFG +K+V
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRT 195
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWS-----QQYQEVAALFH 285
+ GTP ++AP +I G++ + D W++G + EMA G PP+ Q Y+++ +
Sbjct: 196 WXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--- 252
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLE 312
G + P + S KD L L+
Sbjct: 253 -GKVR----FPSHFSSDLKDLLRNLLQ 274
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 137/270 (50%), Gaps = 14/270 (5%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFA-SKEKAQDHIXXXXXXXXXXXXXSHPN 132
+G GA G V + + + +A+K ++ FA + D +HP
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
I++ + + E I+LE + GG + + EA + Y Q+LL ++YLH +GI
Sbjct: 77 IIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGI 135
Query: 193 MHRDIKGANILVDNK--GC-IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT- 248
+HRD+K N+L+ ++ C IK+ DFG SK + E S +++ GTP ++APEV+
Sbjct: 136 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVG 192
Query: 249 --GHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSH--PPIPENLSVKAK 304
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S KA
Sbjct: 193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 252
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDD 334
D + K L +P R T E L+HP++ +D
Sbjct: 253 DLVKKLLVVDPKARFTTEEALRHPWLQDED 282
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 137/270 (50%), Gaps = 14/270 (5%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFA-SKEKAQDHIXXXXXXXXXXXXXSHPN 132
+G GA G V + + + +A+K ++ FA + D +HP
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
I++ + + E I+LE + GG + + EA + Y Q+LL ++YLH +GI
Sbjct: 77 IIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGI 135
Query: 193 MHRDIKGANILVDNK--GC-IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT- 248
+HRD+K N+L+ ++ C IK+ DFG SK + E S +++ GTP ++APEV+
Sbjct: 136 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVG 192
Query: 249 --GHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSH--PPIPENLSVKAK 304
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S KA
Sbjct: 193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 252
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDD 334
D + K L +P R T E L+HP++ +D
Sbjct: 253 DLVKKLLVVDPKARFTTEEALRHPWLQDED 282
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 137/270 (50%), Gaps = 14/270 (5%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFA-SKEKAQDHIXXXXXXXXXXXXXSHPN 132
+G GA G V + + + +A+K ++ FA + D +HP
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILKKLNHPC 82
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
I++ + + E I+LE + GG + + EA + Y Q+LL ++YLH +GI
Sbjct: 83 IIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGI 141
Query: 193 MHRDIKGANILVDNK--GC-IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV---IR 246
+HRD+K N+L+ ++ C IK+ DFG SK + E S +++ GTP ++APEV +
Sbjct: 142 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVG 198
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSH--PPIPENLSVKAK 304
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S KA
Sbjct: 199 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 258
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDD 334
D + K L +P R T E L+HP++ +D
Sbjct: 259 DLVKKLLVVDPKARFTTEEALRHPWLQDED 288
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 29/294 (9%)
Query: 67 RWRKGE----------LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIX 116
RW++ E ++G GAF V + + + +L+A+K + +KE +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-------AKEALEGKEG 61
Query: 117 XXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTY 176
HPNIV L ++++ V GG + + + G + E
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 177 TKQLLLGLEYLHNHGIMHRDIKGANIL---VDNKGCIKLADFGASKQVAELATVSGAKSM 233
Q+L ++YLH+ GI+HRD+K N+L +D I ++DFG SK + +S A
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--- 178
Query: 234 KGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHP 293
GTP ++APEV+ Q +S + D WS+G + G PP+ + A LF +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLFEQILKAEYE 236
Query: 294 ---PIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDE-DPVLHASV 343
P +++S AKDF+ +EK+P+ R T + L+HP++ GD D +H SV
Sbjct: 237 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 137/270 (50%), Gaps = 14/270 (5%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFA-SKEKAQDHIXXXXXXXXXXXXXSHPN 132
+G GA G V + + + +A++ ++ FA + D +HP
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILKKLNHPC 201
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
I++ + + E I+LE + GG + + EA + Y Q+LL ++YLH +GI
Sbjct: 202 IIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGI 260
Query: 193 MHRDIKGANILVDNK--GC-IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV---IR 246
+HRD+K N+L+ ++ C IK+ DFG SK + E S +++ GTP ++APEV +
Sbjct: 261 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVG 317
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSH--PPIPENLSVKAK 304
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S KA
Sbjct: 318 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 377
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDD 334
D + K L +P R T E L+HP++ +D
Sbjct: 378 DLVKKLLVVDPKARFTTEEALRHPWLQDED 407
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 154/334 (46%), Gaps = 40/334 (11%)
Query: 67 RWRKGE----------LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIX 116
RW++ E ++G GAF V + + + +L+A+K + A + ++ I
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA 68
Query: 117 XXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTY 176
HPNIV L ++++ V GG + + + G + E
Sbjct: 69 VLHKI-------KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 177 TKQLLLGLEYLHNHGIMHRDIKGANIL---VDNKGCIKLADFGASKQVAELATVSGAKSM 233
Q+L ++YLH+ GI+HRD+K N+L +D I ++DFG SK + +S A
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--- 178
Query: 234 KGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHP 293
GTP ++APEV+ Q +S + D WS+G + G PP+ + A LF +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLFEQILKAEYE 236
Query: 294 ---PIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDE-DPVLHASVMKS--- 346
P +++S AKDF+ +EK+P+ R T + L+HP++ GD D +H SV +
Sbjct: 237 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKK 296
Query: 347 --------SEILSPSHVANLESLQMLTSPGSPGS 372
+ + V ++ LQ+ PG G+
Sbjct: 297 NFAKSKWKQAFNATAVVRHMRKLQLGHQPGGTGT 330
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 29/294 (9%)
Query: 67 RWRKGE----------LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIX 116
RW++ E ++G GAF V + + + +L+A+K + +KE +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-------AKEALEGKEG 61
Query: 117 XXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTY 176
HPNIV L ++++ V GG + + + G + E
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 177 TKQLLLGLEYLHNHGIMHRDIKGANIL---VDNKGCIKLADFGASKQVAELATVSGAKSM 233
Q+L ++YLH+ GI+HRD+K N+L +D I ++DFG SK + +S A
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--- 178
Query: 234 KGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHP 293
GTP ++APEV+ Q +S + D WS+G + G PP+ + A LF +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLFEQILKAEYE 236
Query: 294 ---PIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDE-DPVLHASV 343
P +++S AKDF+ +EK+P+ R T + L+HP++ GD D +H SV
Sbjct: 237 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 130/270 (48%), Gaps = 22/270 (8%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G GAF V + +G+L AVK + A + ++ I H
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI-------KHE 80
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
NIV L ++++ V GG + + + G + E T +Q+L + YLH G
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 192 IMHRDIKGANILV---DNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
I+HRD+K N+L D + I ++DFG SK + +S A GTP ++APEV+ Q
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA---CGTPGYVAPEVLAQK 197
Query: 249 GHSYSADIWSVGCTVIEMATGKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+S + D WS+G + G PP+ S+ ++++ + P +++S A
Sbjct: 198 PYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILK----AEYEFDSPYWDDISDSA 253
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFVTGD 333
KDF+ +EK+P+ R T + +HP++ GD
Sbjct: 254 KDFIRNLMEKDPNKRYTCEQAARHPWIAGD 283
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 29/294 (9%)
Query: 67 RWRKGE----------LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIX 116
RW++ E ++G GAF V + + + +L+A+K + +KE +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-------AKEALEGKEG 61
Query: 117 XXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTY 176
HPNIV L ++++ V GG + + + G + E
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 177 TKQLLLGLEYLHNHGIMHRDIKGANIL---VDNKGCIKLADFGASKQVAELATVSGAKSM 233
Q+L ++YLH+ GI+HRD+K N+L +D I ++DFG SK + +S A
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--- 178
Query: 234 KGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHP 293
GTP ++APEV+ Q +S + D WS+G + G PP+ + A LF +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLFEQILKAEYE 236
Query: 294 ---PIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDE-DPVLHASV 343
P +++S AKDF+ +EK+P+ R T + L+HP++ GD D +H SV
Sbjct: 237 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 137/270 (50%), Gaps = 14/270 (5%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFA-SKEKAQDHIXXXXXXXXXXXXXSHPN 132
+G GA G V + + + +A++ ++ FA + D +HP
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILKKLNHPC 215
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
I++ + + E I+LE + GG + + EA + Y Q+LL ++YLH +GI
Sbjct: 216 IIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGI 274
Query: 193 MHRDIKGANILVDNK--GC-IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT- 248
+HRD+K N+L+ ++ C IK+ DFG SK + E S +++ GTP ++APEV+
Sbjct: 275 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVG 331
Query: 249 --GHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSH--PPIPENLSVKAK 304
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S KA
Sbjct: 332 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL 391
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDD 334
D + K L +P R T E L+HP++ +D
Sbjct: 392 DLVKKLLVVDPKARFTTEEALRHPWLQDED 421
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 14/279 (5%)
Query: 58 PSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXX 117
P + P ++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 2 PQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTR 59
Query: 118 XXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYT 177
HP V+ T +++E L L + G + + K G F E R YT
Sbjct: 60 ERDVMSRL---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 116
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
+++ LEYLH GI+HRD+K NIL++ I++ DFG +K ++ + + A GT
Sbjct: 117 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 176
Query: 238 YWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
+++PE++ + S+D+W++GC + ++ G PP+ + L K PE
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPE 233
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASE------LLKHPFV 330
KA+D + K L + R E L HPF
Sbjct: 234 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 272
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 14/279 (5%)
Query: 58 PSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXX 117
P + P ++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 1 PQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTR 58
Query: 118 XXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYT 177
HP V+ T +++E L L + G + + K G F E R YT
Sbjct: 59 ERDVMSRL---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 115
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
+++ LEYLH GI+HRD+K NIL++ I++ DFG +K ++ + + A GT
Sbjct: 116 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 175
Query: 238 YWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
+++PE++ + S+D+W++GC + ++ G PP+ + L K PE
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPE 232
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASEL-----LK-HPFV 330
KA+D + K L + R E+ LK HPF
Sbjct: 233 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 271
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 90
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 91 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A S GT +++PE++ +
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 266
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 267 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 295
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 134/270 (49%), Gaps = 25/270 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G++GR G++L K++ ++ S +A+ + HPNI
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL----DYGSMTEAEKQMLVSEVNLLREL--KHPNI 67
Query: 134 VRYLGTV--REEESLNILLEFVPGGSISSLLGKFGPF-----PEAVMRTYTKQLLLGLEY 186
VRY + R +L I++E+ GG ++S++ K E V+R T QL L L+
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT-QLTLALKE 126
Query: 187 LHN-----HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
H H ++HRD+K AN+ +D K +KL DFG ++ + AK GTPY+M+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DEDFAKEFVGTPYYMS 184
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
PE + + ++ +DIWS+GC + E+ PP++ Q E+A G + IP S
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYRYS 241
Query: 301 VKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + + + L + RP+ E+L++P +
Sbjct: 242 DELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 89
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 90 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE++ +
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPFRAGNE---GLIFAKIIKLEYDFPEKFFPKARDLV 265
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 127/272 (46%), Gaps = 14/272 (5%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P ++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 6 PEDFKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSR 63
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGL 184
HP V+ T +++E L L + G + + K G F E R YT +++ L
Sbjct: 64 L---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 120
Query: 185 EYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
EYLH GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE+
Sbjct: 121 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ + S+D+W++GC + ++ G PP+ + L K PE KA+
Sbjct: 181 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKAR 237
Query: 305 DFLLKCLEKEPDLRPTASEL-----LK-HPFV 330
D + K L + R E+ LK HPF
Sbjct: 238 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 269
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 89
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 90 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE++ +
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---GLIFAKIIKLEYDFPEKFFPKARDLV 265
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 127/272 (46%), Gaps = 14/272 (5%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P ++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSR 64
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGL 184
HP V+ T +++E L L + G + + K G F E R YT +++ L
Sbjct: 65 L---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 121
Query: 185 EYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
EYLH GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE+
Sbjct: 122 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ + S+D+W++GC + ++ G PP+ + L K PE KA+
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKAR 238
Query: 305 DFLLKCLEKEPDLRPTASEL-----LK-HPFV 330
D + K L + R E+ LK HPF
Sbjct: 239 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 125/269 (46%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 87
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 88 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A + GT +++PE++ +
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 263
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 264 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 86
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 87 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A S GT +++PE++ +
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 262
Query: 308 LKCLEKEPDLRPTASEL-----LK-HPFV 330
K L + R E+ LK HPF
Sbjct: 263 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 291
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 133/265 (50%), Gaps = 17/265 (6%)
Query: 73 LIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
++G G +G+V+ + ++G++ A+K VL A K H
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMK-VLKKAMIVRNAKDTAH---TKAERNILEEVK 79
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HP IV + + L ++LE++ GG + L + G F E Y ++ + L +LH
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ 139
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
GI++RD+K NI+++++G +KL DFG K+ TV+ + GT +MAPE++ ++G
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT--HTFCGTIEYMAPEILMRSG 197
Query: 250 HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLK 309
H+ + D WS+G + +M TG PP++ + ++ K +P L+ +A+D L K
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI---DKILKCKLNLPPYLTQEARDLLKK 254
Query: 310 CLEKEPDLR-----PTASELLKHPF 329
L++ R A E+ HPF
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPF 279
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 131/270 (48%), Gaps = 12/270 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G F V +N ++G+ AVK V +A +S + + + HP
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML---KHP 88
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP----FPEAVMRTYTKQLLLGLEYL 187
+IV L T + L ++ EF+ G + + K + EAV Y +Q+L L Y
Sbjct: 89 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 188 HNHGIMHRDIKGANILV---DNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
H++ I+HRD+K +L+ +N +KL FG + Q+ E V+G + GTP++MAPEV
Sbjct: 149 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV--GTPHFMAPEV 206
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ + D+W G + + +G P+ + + G K +P ++S AK
Sbjct: 207 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAK 266
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDD 334
D + + L +P R T E L HP++ D
Sbjct: 267 DLVRRMLMLDPAERITVYEALNHPWLKERD 296
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 87
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 88 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE++ +
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 263
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 264 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 87
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 88 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE++ +
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 263
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 264 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 131/270 (48%), Gaps = 12/270 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G F V +N ++G+ AVK V +A +S + + + HP
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML---KHP 86
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP----FPEAVMRTYTKQLLLGLEYL 187
+IV L T + L ++ EF+ G + + K + EAV Y +Q+L L Y
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 188 HNHGIMHRDIKGANILV---DNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
H++ I+HRD+K +L+ +N +KL FG + Q+ E V+G + GTP++MAPEV
Sbjct: 147 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV--GTPHFMAPEV 204
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ + D+W G + + +G P+ + + G K +P ++S AK
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAK 264
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDD 334
D + + L +P R T E L HP++ D
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWLKERD 294
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 89
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 90 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE++ +
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 265
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 90
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 91 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE++ +
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 266
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 267 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 295
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 89
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 90 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE++ +
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 265
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 89
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 90 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE++ +
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 265
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 115/263 (43%), Gaps = 12/263 (4%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G +G G FG VY+ + ++A+K VL + KE + + H
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKFIMALK-VLFKSQL-EKEGVEHQLRREIEIQSHL---RH 74
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
PNI+R + + + ++LEF P G + L K G F E T+ ++L L Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGH 250
++HRDIK N+L+ KG +K+ADFG S L + M GT ++ PE+I H
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLDYLPPEMIEGKTH 190
Query: 251 SYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKC 310
D+W G E G PP+ + PP LS +KD + K
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF---LSDGSKDLISKL 247
Query: 311 LEKEPDLRPTASELLKHPFVTGD 333
L P R +++HP+V +
Sbjct: 248 LRYHPPQRLPLKGVMEHPWVKAN 270
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 10/206 (4%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI++ + + S I+ E GG + + K F E KQ+ G+ Y+H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 190 HGIMHRDIKGANILVDN--KGC-IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H I+HRD+K NIL+++ K C IK+ DFG S + + K GT Y++APEV+R
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLR 196
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE--NLSVKAK 304
T + D+WS G + + +G PP+ + E L + T K +P+ +S AK
Sbjct: 197 GT-YDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFV 330
D + K L P LR TA++ L+HP++
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 115/263 (43%), Gaps = 12/263 (4%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G +G G FG VY+ + ++A+K VL + KE + + H
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALK-VLFKSQL-EKEGVEHQLRREIEIQSHL---RH 73
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
PNI+R + + + ++LEF P G + L K G F E T+ ++L L Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGH 250
++HRDIK N+L+ KG +K+ADFG S L + M GT ++ PE+I H
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLDYLPPEMIEGKTH 189
Query: 251 SYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKC 310
D+W G E G PP+ + PP LS +KD + K
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF---LSDGSKDLISKL 246
Query: 311 LEKEPDLRPTASELLKHPFVTGD 333
L P R +++HP+V +
Sbjct: 247 LRYHPPQRLPLKGVMEHPWVKAN 269
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 132/265 (49%), Gaps = 17/265 (6%)
Query: 73 LIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
++G G +G+V+ + ++G++ A+K VL A K H
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMK-VLKKAMIVRNAKDTAH---TKAERNILEEVK 79
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HP IV + + L ++LE++ GG + L + G F E Y ++ + L +LH
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ 139
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
GI++RD+K NI+++++G +KL DFG K+ TV+ GT +MAPE++ ++G
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT--HXFCGTIEYMAPEILMRSG 197
Query: 250 HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLK 309
H+ + D WS+G + +M TG PP++ + ++ K +P L+ +A+D L K
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI---DKILKCKLNLPPYLTQEARDLLKK 254
Query: 310 CLEKEPDLR-----PTASELLKHPF 329
L++ R A E+ HPF
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPF 279
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 126/268 (47%), Gaps = 14/268 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 71
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 72 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 130
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE++ +
Sbjct: 131 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 247
Query: 308 LKCLEKEPDLRPTASEL-----LK-HPF 329
K L + R E+ LK HPF
Sbjct: 248 EKLLVLDATKRLGCEEMEGYGPLKAHPF 275
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 158/348 (45%), Gaps = 62/348 (17%)
Query: 57 SPSVKMSPPIRWR--------KGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASK 108
S +K+SP W GE IG GA+G V ++ SG+++AVK+ I + K
Sbjct: 6 SGKLKISPEQHWDFTAEDLKDLGE-IGRGAYGSVNKMVHKPSGQIMAVKR--IRSTVDEK 62
Query: 109 EKAQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPF 168
E+ Q P IV++ G + E I +E +S+ KF +
Sbjct: 63 EQKQ----LLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMEL-----MSTSFDKFYKY 113
Query: 169 ---------PEAVMRTYTKQLLLGLEYL-HNHGIMHRDIKGANILVDNKGCIKLADFGAS 218
PE ++ T + L +L N I+HRDIK +NIL+D G IKL DFG S
Sbjct: 114 VYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
Query: 219 KQVAELATVSGAKSMKGTPYWMAPEVI----RQTGHSYSADIWSVGCTVIEMATGK---P 271
Q+ + +++ + PY MAPE I + G+ +D+WS+G T+ E+ATG+ P
Sbjct: 174 GQLVD--SIAKTRDAGCRPY-MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP 230
Query: 272 PWSQQYQEVAALFHIGTTKSHPPIPEN-----LSVKAKDFLLKCLEKEPDLRPTASELLK 326
W+ + ++ + K PP N S +F+ CL K+ RP ELLK
Sbjct: 231 KWNSVFDQLTQV-----VKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
Query: 327 HPFVTGDDEDPVLHASVMKSSEILSPSHVANLESLQMLTSPGSPGSVD 374
HPF+ +E V A + +IL QM +P SP VD
Sbjct: 286 HPFILMYEERAVEVACYV--CKILD----------QMPATPSSPMYVD 321
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 25/268 (9%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVK----QVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+L+G G FG+V + +G A+K +V+IA +D +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---------KDEVAHTVTESRVLQN 64
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP + + + L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 124
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQ-VAELATVSGAKSMKGTPYWMAPEVIR 246
H+ +++RDIK N+++D G IK+ DFG K+ +++ AT+ K+ GTP ++APEV+
Sbjct: 125 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFCGTPEYLAPEVLE 181
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ + D W +G + EM G+ P+ Q E LF + P LS +AK
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKSL 238
Query: 307 LLKCLEKEPDLR-----PTASELLKHPF 329
L L+K+P R A E+++H F
Sbjct: 239 LAGLLKKDPKQRLGGGPSDAKEVMEHRF 266
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 25/268 (9%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVK----QVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+L+G G FG+V + +G A+K +V+IA +D +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---------KDEVAHTVTESRVLQN 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP + + + L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQ-VAELATVSGAKSMKGTPYWMAPEVIR 246
H+ +++RDIK N+++D G IK+ DFG K+ +++ AT+ K+ GTP ++APEV+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFCGTPEYLAPEVLE 178
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ + D W +G + EM G+ P+ Q E LF + P LS +AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKSL 235
Query: 307 LLKCLEKEPDLR-----PTASELLKHPF 329
L L+K+P R A E+++H F
Sbjct: 236 LAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 25/268 (9%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVK----QVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+L+G G FG+V + +G A+K +V+IA +D +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---------KDEVAHTVTESRVLQN 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP + + + L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQ-VAELATVSGAKSMKGTPYWMAPEVIR 246
H+ +++RDIK N+++D G IK+ DFG K+ +++ AT+ K+ GTP ++APEV+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFCGTPEYLAPEVLE 178
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ + D W +G + EM G+ P+ Q E LF + P LS +AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKSL 235
Query: 307 LLKCLEKEPDLR-----PTASELLKHPF 329
L L+K+P R A E+++H F
Sbjct: 236 LAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 114/260 (43%), Gaps = 12/260 (4%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG VY+ + ++A+K VL + KE + + HPNI
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALK-VLFKSQL-EKEGVEHQLRREIEIQSHL---RHPNI 76
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
+R + + + ++LEF P G + L K G F E T+ ++L L Y H ++
Sbjct: 77 LRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVI 136
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
HRDIK N+L+ KG +K+ADFG S L + M GT ++ PE+I H
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLDYLPPEMIEGKTHDEK 192
Query: 254 ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEK 313
D+W G E G PP+ + PP LS +KD + K L
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF---LSDGSKDLISKLLRY 249
Query: 314 EPDLRPTASELLKHPFVTGD 333
P R +++HP+V +
Sbjct: 250 HPPQRLPLKGVMEHPWVKAN 269
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 86
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 87 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE++ +
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 262
Query: 308 LKCLEKEPDLRPTASEL-----LK-HPFV 330
K L + R E+ LK HPF
Sbjct: 263 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 291
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 125/266 (46%), Gaps = 25/266 (9%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG+VY + G+ +AVK AA E I HP
Sbjct: 13 EIIGIGGFGKVYRAFWI--GDEVAVK----AARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLL-GKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
NI+ G +E +L +++EF GG ++ +L GK P ++ + Q+ G+ YLH+
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDE 124
Query: 191 GI---MHRDIKGANILVDNK--------GCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
I +HRD+K +NIL+ K +K+ DFG +++ +S A G W
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA----GAYAW 180
Query: 240 MAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL 299
MAPEVIR + S +D+WS G + E+ TG+ P+ + +A + + K PIP
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF-RGIDGLAVAYGVAMNKLALPIPSTC 239
Query: 300 SVKAKDFLLKCLEKEPDLRPTASELL 325
+ C +P RP+ + +L
Sbjct: 240 PEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI++ ++ + +++E GG + + F E KQ+L G+ YLH
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK 154
Query: 190 HGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMK---GTPYWMAPE 243
H I+HRD+K N+L+++K IK+ DFG S A K MK GT Y++APE
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLS------AVFENQKKMKERLGTAYYIAPE 208
Query: 244 VIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQY-QEVAALFHIGTTKSHPPIPENLSVK 302
V+R+ + D+WS+G + + G PP+ Q QE+ G P +N+S
Sbjct: 209 VLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEG 267
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFV 330
AKD + + L+ + R +A + L+HP++
Sbjct: 268 AKDLIKQMLQFDSQRRISAQQALEHPWI 295
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 25/268 (9%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVK----QVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+L+G G FG+V + +G A+K +V+IA +D +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---------KDEVAHTVTESRVLQN 66
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP + + + L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 126
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQ-VAELATVSGAKSMKGTPYWMAPEVIR 246
H+ +++RDIK N+++D G IK+ DFG K+ +++ AT+ K GTP ++APEV+
Sbjct: 127 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLE 183
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ + D W +G + EM G+ P+ Q E LF + P LS +AK
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKSL 240
Query: 307 LLKCLEKEPDLR-----PTASELLKHPF 329
L L+K+P R A E+++H F
Sbjct: 241 LAGLLKKDPKQRLGGGPSDAKEVMEHRF 268
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F + L + A+K ++ KE ++
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 87
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 88 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE++ +
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 263
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 264 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 25/268 (9%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVK----QVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+L+G G FG+V + +G A+K +V+IA +D +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---------KDEVAHTVTESRVLQN 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP + + + L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQ-VAELATVSGAKSMKGTPYWMAPEVIR 246
H+ +++RDIK N+++D G IK+ DFG K+ +++ AT+ K GTP ++APEV+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLE 178
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ + D W +G + EM G+ P+ Q E LF + P LS +AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKSL 235
Query: 307 LLKCLEKEPDLR-----PTASELLKHPF 329
L L+K+P R A E+++H F
Sbjct: 236 LAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 25/268 (9%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVK----QVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+L+G G FG+V + +G A+K +V+IA +D +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---------KDEVAHTVTESRVLQN 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP + + + L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQ-VAELATVSGAKSMKGTPYWMAPEVIR 246
H+ +++RDIK N+++D G IK+ DFG K+ +++ AT+ K GTP ++APEV+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLE 178
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ + D W +G + EM G+ P+ Q E LF + P LS +AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKSL 235
Query: 307 LLKCLEKEPDLR-----PTASELLKHPF 329
L L+K+P R A E+++H F
Sbjct: 236 LAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 25/268 (9%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVK----QVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+L+G G FG+V + +G A+K +V+IA +D +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---------KDEVAHTVTESRVLQN 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP + + + L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQ-VAELATVSGAKSMKGTPYWMAPEVIR 246
H+ +++RDIK N+++D G IK+ DFG K+ +++ AT+ K GTP ++APEV+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLE 178
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ + D W +G + EM G+ P+ Q E LF + P LS +AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKSL 235
Query: 307 LLKCLEKEPDLR-----PTASELLKHPF 329
L L+K+P R A E+++H F
Sbjct: 236 LAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 94
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 95 -DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 153
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE++ +
Sbjct: 154 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K PE KA+D +
Sbjct: 214 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPEKFFPKARDLV 270
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 271 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 299
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 117/238 (49%), Gaps = 24/238 (10%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
+HP +V + E L ++E+V GG + + + PE R Y+ ++ L L YLH
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 189 NHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
GI++RD+K N+L+D++G IKL D+G K+ L + GTP ++APE++R
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSTFCGTPNYIAPEILRGE 228
Query: 249 GHSYSADIWSVGCTVIEMATGKPPWS--------QQYQEVAALFHIGTTKSHPPIPENLS 300
+ +S D W++G + EM G+ P+ Q E LF + K IP +LS
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-DYLFQVILEK-QIRIPRSLS 286
Query: 301 VKAKDFLLKCLEKEPDLR------PTASELLKHPFVTGDDEDPVLHASVMKSSEILSP 352
VKA L L K+P R +++ HPF D D +M+ +++ P
Sbjct: 287 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD------MMEQKQVVPP 338
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 10/206 (4%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI++ + + S I+ E GG + + K F E KQ+ G+ Y+H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 190 HGIMHRDIKGANILVDN--KGC-IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H I+HRD+K NIL+++ K C IK+ DFG S + + K GT Y++APEV+R
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLR 196
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE--NLSVKAK 304
T + D+WS G + + +G PP+ + E L + T K +P+ +S AK
Sbjct: 197 GT-YDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFV 330
D + K L P LR TA++ L+HP++
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 10/206 (4%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI++ + + S I+ E GG + + K F E KQ+ G+ Y+H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 190 HGIMHRDIKGANILVDN--KGC-IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H I+HRD+K NIL+++ K C IK+ DFG S + + K GT Y++APEV+R
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLR 196
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE--NLSVKAK 304
T + D+WS G + + +G PP+ + E L + T K +P+ +S AK
Sbjct: 197 GT-YDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFV 330
D + K L P LR TA++ L+HP++
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 134/280 (47%), Gaps = 22/280 (7%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + +G G VY+ +L +K V I A F + ++ +
Sbjct: 12 RYKIVDKLGGGGMSTVYLA----EDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSS 66
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
SH NIV + E++ +++E++ G ++S + GP +T Q+L G+++
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKH 126
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H+ I+HRDIK NIL+D+ +K+ DFG +K ++E +++ + GT + +PE +
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE-TSLTQTNHVLGTVQYFSPEQAK 185
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIG------TTKSHPPIPENLS 300
DI+S+G + EM G+PP++ + A+ HI TT IP++LS
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLS 245
Query: 301 VKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLH 340
+ +L+ EK+ R + +K DD VLH
Sbjct: 246 ----NVILRATEKDKANRYKTIQEMK------DDLSSVLH 275
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 101
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 102 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 160
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMK 234
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G ++
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 215
Query: 235 G--TPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 216 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 14/269 (5%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRL-- 92
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP V+ T +++E L L + G + + K G F E R YT +++ LEYL
Sbjct: 93 -DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 151
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H GI+HRD+K NIL++ I++ DFG +K ++ + + A GT +++PE++ +
Sbjct: 152 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
S+D+W++GC + ++ G PP+ + L K P KA+D +
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIFQKIIKLEYDFPAAFFPKARDLV 268
Query: 308 LKCLEKEPDLRPTASE------LLKHPFV 330
K L + R E L HPF
Sbjct: 269 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 297
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 24/238 (10%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
+HP +V + E L ++E+V GG + + + PE R Y+ ++ L L YLH
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 189 NHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
GI++RD+K N+L+D++G IKL D+G K+ L GTP ++APE++R
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 249 GHSYSADIWSVGCTVIEMATGKPPWS--------QQYQEVAALFHIGTTKSHPPIPENLS 300
+ +S D W++G + EM G+ P+ Q E LF + K IP ++S
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-DYLFQVILEK-QIRIPRSMS 254
Query: 301 VKAKDFLLKCLEKEPDLR------PTASELLKHPFVTGDDEDPVLHASVMKSSEILSP 352
VKA L L K+P R +++ HPF D D +M+ +++ P
Sbjct: 255 VKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWD------MMEQKQVVPP 306
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 101
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 102 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 160
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAK--S 232
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G S
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 215
Query: 233 MKGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 216 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 24/238 (10%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
+HP +V + E L ++E+V GG + + + PE R Y+ ++ L L YLH
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 189 NHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
GI++RD+K N+L+D++G IKL D+G K+ L GTP ++APE++R
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 249 GHSYSADIWSVGCTVIEMATGKPPWS--------QQYQEVAALFHIGTTKSHPPIPENLS 300
+ +S D W++G + EM G+ P+ Q E LF + K IP +LS
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-DYLFQVILEK-QIRIPRSLS 239
Query: 301 VKAKDFLLKCLEKEPDLR------PTASELLKHPFVTGDDEDPVLHASVMKSSEILSP 352
VKA L L K+P R +++ HPF D D +M+ +++ P
Sbjct: 240 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD------MMEQKQVVPP 291
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 48 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 95
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 96 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 154
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAK--S 232
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G S
Sbjct: 155 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 209
Query: 233 MKGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 210 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 249
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 24/238 (10%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
+HP +V + E L ++E+V GG + + + PE R Y+ ++ L L YLH
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 189 NHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
GI++RD+K N+L+D++G IKL D+G K+ L GTP ++APE++R
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGE 185
Query: 249 GHSYSADIWSVGCTVIEMATGKPPWS--------QQYQEVAALFHIGTTKSHPPIPENLS 300
+ +S D W++G + EM G+ P+ Q E LF + K IP +LS
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-DYLFQVILEK-QIRIPRSLS 243
Query: 301 VKAKDFLLKCLEKEPDLR------PTASELLKHPFVTGDDEDPVLHASVMKSSEILSP 352
VKA L L K+P R +++ HPF D D +M+ +++ P
Sbjct: 244 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD------MMEQKQVVPP 295
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 56 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 103
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 104 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 162
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAK--S 232
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G S
Sbjct: 163 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 217
Query: 233 MKGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 218 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 257
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------------LQIM 67
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPA-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMK 234
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G ++
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 181
Query: 235 G--TPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 58 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 105
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 106 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 164
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAK--S 232
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G S
Sbjct: 165 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 219
Query: 233 MKGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 220 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 259
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 130/268 (48%), Gaps = 20/268 (7%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E++G GAF V++ +G+L A+K + + F + H
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENE--------IAVLKKIKHE 66
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
NIV ++++ V GG + + + G + E +Q+L ++YLH +G
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG 126
Query: 192 IMHRDIKGANILV---DNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
I+HRD+K N+L + I + DFG SK + + +S A GTP ++APEV+ Q
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTA---CGTPGYVAPEVLAQK 182
Query: 249 GHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHI---GTTKSHPPIPENLSVKAKD 305
+S + D WS+G + G PP+ ++ + + LF G + P +++S AKD
Sbjct: 183 PYSKAVDCWSIGVITYILLCGYPPFYEETE--SKLFEKIKEGYYEFESPFWDDISESAKD 240
Query: 306 FLLKCLEKEPDLRPTASELLKHPFVTGD 333
F+ LEK+P+ R T + L HP++ G+
Sbjct: 241 FICHLLEKDPNERYTCEKALSHPWIDGN 268
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 133/291 (45%), Gaps = 45/291 (15%)
Query: 74 IGCGAFGRVYMGMNL-DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
IG GA+G+V+ +L + G +A+K+V + +E HPN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTG---EEGMPLSTIREVAVLRHLETFEHPN 75
Query: 133 IVRYLGTVR-----EEESLNILLEFVPGGSISSLLGKFGP--FPEAVMRTYTKQLLLGLE 185
+VR E L ++ E V +++ L K P ++ QLL GL+
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
+LH+H ++HRD+K NILV + G IKLADFG ++ + ++ S+ T ++ APEV+
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---SVVVTLWYRAPEVL 191
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKP--------------------PWSQQYQEVAAL-- 283
Q+ ++ D+WSVGC EM KP P + + AL
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 284 --FHIGTTKSHPPIPE---NLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
FH +KS PI + ++ KD LLKCL P R +A L HP+
Sbjct: 252 QAFH---SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 28 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 75
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 76 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 134
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMK 234
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G ++
Sbjct: 135 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 189
Query: 235 G--TPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 190 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 229
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 79
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 80 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 138
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMK 234
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G ++
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 193
Query: 235 G--TPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 194 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 39 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 86
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 87 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 145
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMK 234
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G ++
Sbjct: 146 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 200
Query: 235 G--TPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 201 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 240
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 33 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 80
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 81 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 139
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAK--S 232
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G S
Sbjct: 140 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 194
Query: 233 MKGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 195 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 234
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 134/271 (49%), Gaps = 27/271 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G GA+G V ++ SG+++AVK++ N +Q+ P
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVN------SQEQKRLLMDLDISMRTVDCPFT 112
Query: 134 VRYLGTVREEESLNILLEFVPGG---SISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
V + G + E + I +E + ++ K PE ++ ++ LE+LH+
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 191 -GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPEVIR-- 246
++HRD+K +N+L++ G +K+ DFG S + + S AK++ G +MAPE I
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD----SVAKTIDAGCKPYMAPERINPE 228
Query: 247 --QTGHSYSADIWSVGCTVIEMATGKPP---WSQQYQEVAALFHIGTTKSHPPIP-ENLS 300
Q G+S +DIWS+G T+IE+A + P W +Q++ + + P +P + S
Sbjct: 229 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV----VEEPSPQLPADKFS 284
Query: 301 VKAKDFLLKCLEKEPDLRPTASELLKHPFVT 331
+ DF +CL+K RPT EL++HPF T
Sbjct: 285 AEFVDFTSQCLKKNSKERPTYPELMQHPFFT 315
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 99 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 146
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 147 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 205
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAK--S 232
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G S
Sbjct: 206 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 260
Query: 233 MKGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 261 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 300
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 25 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 72
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 73 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 131
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAK--S 232
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G S
Sbjct: 132 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 186
Query: 233 MKGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 187 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 226
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 79
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 80 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 138
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMK 234
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G ++
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 193
Query: 235 G--TPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 194 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 67
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMK 234
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G ++
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 181
Query: 235 G--TPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------------LQIM 67
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAK--S 232
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G S
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 181
Query: 233 MKGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------------LQIM 67
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAK--S 232
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G S
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 181
Query: 233 MKGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 67
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAK--S 232
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G S
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 181
Query: 233 MKGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 67
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMK 234
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G ++
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 181
Query: 235 G--TPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 47/295 (15%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
L+G G++G V N D+G ++A+K+ L + + +K H N
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKI------AMREIKLLKQLRHEN 85
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEA----VMRTYTKQLLLGLEYLH 188
+V L ++++ ++ EFV ++L FP V++ Y Q++ G+ + H
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVD----HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH 141
Query: 189 NHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPE-VIRQ 247
+H I+HRDIK NILV G +KL DFG ++ +A V + T ++ APE ++
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV--ATRWYRAPELLVGD 199
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSH--------------- 292
+ + D+W++GC V EM G+P + ++ L+HI +
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGD-SDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258
Query: 293 -----PPIPE---------NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGD 333
P I E LS D KCL +PD RP +ELL H F D
Sbjct: 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 21 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 68
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 69 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 127
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMK 234
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G ++
Sbjct: 128 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 182
Query: 235 G--TPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 183 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 222
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 133/291 (45%), Gaps = 45/291 (15%)
Query: 74 IGCGAFGRVYMGMNL-DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
IG GA+G+V+ +L + G +A+K+V + +E HPN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTG---EEGMPLSTIREVAVLRHLETFEHPN 75
Query: 133 IVRYLGTVR-----EEESLNILLEFVPGGSISSLLGKFGP--FPEAVMRTYTKQLLLGLE 185
+VR E L ++ E V +++ L K P ++ QLL GL+
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
+LH+H ++HRD+K NILV + G IKLADFG ++ + ++ S+ T ++ APEV+
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---SVVVTLWYRAPEVL 191
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKP--------------------PWSQQYQEVAAL-- 283
Q+ ++ D+WSVGC EM KP P + + AL
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 284 --FHIGTTKSHPPIPE---NLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
FH +KS PI + ++ KD LLKCL P R +A L HP+
Sbjct: 252 QAFH---SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 24 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 71
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++E LN++L++VP ++ + + P ++
Sbjct: 72 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 130
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMK 234
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G ++
Sbjct: 131 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 185
Query: 235 G--TPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 186 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 225
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 62 MSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
MS ++++ E +G G + VY G+N +G +A+K+V + + + A I
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGK-FGPFPEAV----MRTY 176
H NIVR + E L ++ EF+ + + G P + ++ +
Sbjct: 61 -------KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYF 113
Query: 177 TKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT 236
QLL GL + H + I+HRD+K N+L++ +G +KL DFG ++ V+ S T
Sbjct: 114 QWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG--IPVNTFSSEVVT 171
Query: 237 PYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS-- 291
++ AP+V+ + +S S DIWS GC + EM TGKP P + +++ +F I T +
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNES 231
Query: 292 ---------------------------HPPIPENLSVKAKDFLLKCLEKEPDLRPTASEL 324
P E L DFL L+ PD+R +A +
Sbjct: 232 LWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA 291
Query: 325 LKHPF 329
L HP+
Sbjct: 292 LHHPW 296
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 138/270 (51%), Gaps = 16/270 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
++IG GAFG V + + S ++ A+K + + F +++ + P
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMK---LLSKFEMIKRSDSAFFWEERDIMAFA--NSP 135
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
+V+ ++++ L +++E++PGG + +L+ + PE + YT +++L L+ +H+ G
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR-QTGH 250
++HRD+K N+L+D G +KLADFG ++ E V + GTP +++PEV++ Q G
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVH-CDTAVGTPDYISPEVLKSQGGD 253
Query: 251 SY---SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEN--LSVKAKD 305
Y D WSVG + EM G P+ V I K+ PE+ +S AK+
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTPFYAD-SLVGTYSKIMDHKNSLCFPEDAEISKHAKN 312
Query: 306 FLLKCL-EKEPDL-RPTASELLKHPFVTGD 333
+ L ++E L R E+ +HPF D
Sbjct: 313 LICAFLTDREVRLGRNGVEEIKQHPFFKND 342
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 133/291 (45%), Gaps = 45/291 (15%)
Query: 74 IGCGAFGRVYMGMNL-DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
IG GA+G+V+ +L + G +A+K+V + +E HPN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTG---EEGMPLSTIREVAVLRHLETFEHPN 75
Query: 133 IVRYLGTVR-----EEESLNILLEFVPGGSISSLLGKFGP--FPEAVMRTYTKQLLLGLE 185
+VR E L ++ E V +++ L K P ++ QLL GL+
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
+LH+H ++HRD+K NILV + G IKLADFG ++ + ++ S+ T ++ APEV+
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---SVVVTLWYRAPEVL 191
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKP--------------------PWSQQYQEVAAL-- 283
Q+ ++ D+WSVGC EM KP P + + AL
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 284 --FHIGTTKSHPPIPE---NLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
FH +KS PI + ++ KD LLKCL P R +A L HP+
Sbjct: 252 QAFH---SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 13/269 (4%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R+++ + +G GA+G V + + +G A+K + ++ +
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSG-----ALLDEVAVLK 59
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
HPNI++ ++ + +++E GG + + F E KQ+L G Y
Sbjct: 60 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 119
Query: 187 LHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPE 243
LH H I+HRD+K N+L+++K IK+ DFG S A K GT Y++APE
Sbjct: 120 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS---AHFEVGGKMKERLGTAYYIAPE 176
Query: 244 VIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQY-QEVAALFHIGTTKSHPPIPENLSVK 302
V+R+ + D+WS G + + G PP+ Q QE+ G PP +S +
Sbjct: 177 VLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDE 235
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVT 331
AK + L EP R +A E L HP++
Sbjct: 236 AKQLVKLMLTYEPSKRISAEEALNHPWIV 264
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 123/263 (46%), Gaps = 12/263 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G GAF V M + +G+ A K + K A+DH HP
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKII-----NTKKLSARDH-QKLEREARICRLLKHP 63
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
NIVR ++ EE ++ + V GG + + + EA +Q+L + + H +G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 192 IMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
I+HRD+K N+L+ +K +KLADFG + +V GTP +++PEV+R+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ--GDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 249 GHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+ D+W+ G + + G PP W + + G P + ++ +AKD +
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI 241
Query: 308 LKCLEKEPDLRPTASELLKHPFV 330
K L P R TASE LKHP++
Sbjct: 242 NKMLTINPAKRITASEALKHPWI 264
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 88/143 (61%), Gaps = 5/143 (3%)
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH-N 189
P IV + G + ++I +E + GGS+ +L + PE ++ + +L GL YL
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 133
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
H IMHRD+K +NILV+++G IKL DFG S Q+ + S A S GT +MAPE ++ T
Sbjct: 134 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMAPERLQGTH 189
Query: 250 HSYSADIWSVGCTVIEMATGKPP 272
+S +DIWS+G +++E+A G+ P
Sbjct: 190 YSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 13/269 (4%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R+++ + +G GA+G V + + +G A+K + ++ +
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSG-----ALLDEVAVLK 76
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
HPNI++ ++ + +++E GG + + F E KQ+L G Y
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 136
Query: 187 LHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPE 243
LH H I+HRD+K N+L+++K IK+ DFG S A K GT Y++APE
Sbjct: 137 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS---AHFEVGGKMKERLGTAYYIAPE 193
Query: 244 VIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQY-QEVAALFHIGTTKSHPPIPENLSVK 302
V+R+ + D+WS G + + G PP+ Q QE+ G PP +S +
Sbjct: 194 VLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDE 252
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVT 331
AK + L EP R +A E L HP++
Sbjct: 253 AKQLVKLMLTYEPSKRISAEEALNHPWIV 281
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 137/311 (44%), Gaps = 57/311 (18%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF------GPFPEAVMRTYTKQLL 181
+HPNIV+ L + E L ++ EF +S L KF P ++++Y QLL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEF-----LSMDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ A
Sbjct: 117 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRA 174
Query: 242 PEVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT----------- 289
PE++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 233
Query: 290 --------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 330 VTGDDEDPVLH 340
D PV H
Sbjct: 290 FQ-DVTKPVPH 299
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 24/281 (8%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA--QDHIXXXXXXXXXXXXXSHP 131
IG G+FG+V + D+ ++ A+K + +K+K ++ + HP
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMK-------YMNKQKCVERNEVRNVFKELQIMQGLEHP 75
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
+V + ++EE + ++++ + GG + L + F E ++ + +L++ L+YL N
Sbjct: 76 FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQR 135
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI---RQT 248
I+HRD+K NIL+D G + + DF + A L + +M GT +MAPE+ +
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIA---AMLPRETQITTMAGTKPYMAPEMFSSRKGA 192
Query: 249 GHSYSADIWSVGCTVIEMATGKPPW----SQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
G+S++ D WS+G T E+ G+ P+ S +E+ F P S +
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV----TYPSAWSQEMV 248
Query: 305 DFLLKCLEKEPDLRPTA-SELLKHPFVTGDDEDPVLHASVM 344
L K LE PD R + S++ P++ + D V ++
Sbjct: 249 SLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLI 289
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 137/311 (44%), Gaps = 57/311 (18%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 59
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF------GPFPEAVMRTYTKQLL 181
+HPNIV+ L + E L ++ EF +S L KF P ++++Y QLL
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEF-----LSMDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ A
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRA 172
Query: 242 PEVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT----------- 289
PE++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 231
Query: 290 --------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPF 287
Query: 330 VTGDDEDPVLH 340
D PV H
Sbjct: 288 FQ-DVTKPVPH 297
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 65
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 121
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAP 179
Query: 243 EVIR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 238
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 239 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 294
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 295 Q-DVTKPVPH 303
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 62
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 118
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAP 176
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 235
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 236 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 292 Q-DVTKPVPH 300
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 58
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAP 172
Query: 243 EVIR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 288 Q-DVTKPVPH 296
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 60
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG----IPLPLIKSYLFQLLQ 116
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 174
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 290 Q-DVTKPVPH 298
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 60
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 116
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 174
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 290 Q-DVTKPVPH 298
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG----IPLPLIKSYLFQLLQ 117
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 175
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 291 Q-DVTKPVPH 299
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 65
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 121
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAP 179
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 238
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 239 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 294
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 295 Q-DVTKPVPH 303
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 60
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 116
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 117 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 174
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 290 Q-DVTKPVPH 298
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 58
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 172
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 288 Q-DVTKPVPH 296
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 58
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 172
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 288 Q-DVTKPVPH 296
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 58
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 115 GLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAP 172
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 288 Q-DVTKPVPH 296
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 117
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 175
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 291 Q-DVTKPVPH 299
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 60
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 116
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 174
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 290 Q-DVTKPVPH 298
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 59
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 115
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 173
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 289 Q-DVTKPVPH 297
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 58
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 172
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 288 Q-DVTKPVPH 296
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 123/263 (46%), Gaps = 12/263 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G GAF V M + +G+ A K + K A+DH HP
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKII-----NTKKLSARDH-QKLEREARICRLLKHP 63
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
NIVR ++ EE ++ + V GG + + + EA +Q+L + + H +G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 192 IMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
I+HRD+K N+L+ +K +KLADFG + +V GTP +++PEV+R+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ--GDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 249 GHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+ D+W+ G + + G PP W + + G P + ++ +AKD +
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI 241
Query: 308 LKCLEKEPDLRPTASELLKHPFV 330
K L P R TASE LKHP++
Sbjct: 242 NKMLTINPAKRITASEALKHPWI 264
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 57
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 113
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAP 171
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 287 Q-DVTKPVPH 295
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTG----IPLPLIKSYLFQLLQ 117
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 175
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 291 Q-DVTKPVPH 299
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 58
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAP 172
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 288 Q-DVTKPVPH 296
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 57
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 113
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAP 171
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 287 Q-DVTKPVPH 295
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 57
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 113
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 171
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 287 Q-DVTKPVPH 295
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 58
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 172
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 288 Q-DVTKPVPH 296
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 113/220 (51%), Gaps = 32/220 (14%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+ + ++IG G+FG VY DSGEL+A+K+VL F ++E
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 67
Query: 126 XXXSHPNIVR--YL----GTVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRT 175
H NIVR Y G ++ LN++L++VP ++ + + P ++
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMK 234
Y QL L Y+H+ GI HRDIK N+L+D + +KL DFG++KQ+ V G ++
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVS 181
Query: 235 G--TPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
+ Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 59
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 115
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAP 173
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 289 Q-DVTKPVPH 297
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 117
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 175
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 291 Q-DVTKPVPH 299
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 59
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 115
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 173
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 289 Q-DVTKPVPH 297
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 62
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 118
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 176
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 235
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 236 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 292 Q-DVTKPVPH 300
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 57
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 113
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 171
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 287 Q-DVTKPVPH 295
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 58
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAP 172
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 288 Q-DVTKPVPH 296
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 26/272 (9%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVK----QVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+L+G G FG+V + +G A+K +V++A +D +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA---------KDEVAHTLTENRVLQN 204
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP + + + + L ++E+ GG + L + F E R Y +++ L+YL
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 264
Query: 188 HNH-GIMHRDIKGANILVDNKGCIKLADFGASKQ-VAELATVSGAKSMKGTPYWMAPEVI 245
H+ +++RD+K N+++D G IK+ DFG K+ + + AT+ K+ GTP ++APEV+
Sbjct: 265 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFCGTPEYLAPEVL 321
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ + D W +G + EM G+ P+ Q E LF + P L +AK
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL-ILMEEIRFPRTLGPEAKS 378
Query: 306 FLLKCLEKEPDLR-----PTASELLKHPFVTG 332
L L+K+P R A E+++H F G
Sbjct: 379 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 59
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 115
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 173
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 289 Q-DVTKPVPH 297
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 26/272 (9%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVK----QVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+L+G G FG+V + +G A+K +V++A +D +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA---------KDEVAHTLTENRVLQN 207
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP + + + + L ++E+ GG + L + F E R Y +++ L+YL
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 267
Query: 188 HNH-GIMHRDIKGANILVDNKGCIKLADFGASKQ-VAELATVSGAKSMKGTPYWMAPEVI 245
H+ +++RD+K N+++D G IK+ DFG K+ + + AT+ K+ GTP ++APEV+
Sbjct: 268 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFCGTPEYLAPEVL 324
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ + D W +G + EM G+ P+ Q E LF + P L +AK
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL-ILMEEIRFPRTLGPEAKS 381
Query: 306 FLLKCLEKEPDLR-----PTASELLKHPFVTG 332
L L+K+P R A E+++H F G
Sbjct: 382 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 413
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 27/271 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G GA+G V ++ SG+++AVK++ N +Q+ P
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVN------SQEQKRLLMDLDISMRTVDCPFT 68
Query: 134 VRYLGTVREEESLNILLEFVPGG---SISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
V + G + E + I +E + ++ K PE ++ ++ LE+LH+
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 191 -GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPEVIR-- 246
++HRD+K +N+L++ G +K+ DFG S + + AK + G +MAPE I
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD----DVAKDIDAGCKPYMAPERINPE 184
Query: 247 --QTGHSYSADIWSVGCTVIEMATGKPP---WSQQYQEVAALFHIGTTKSHPPIP-ENLS 300
Q G+S +DIWS+G T+IE+A + P W +Q++ + + P +P + S
Sbjct: 185 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV----VEEPSPQLPADKFS 240
Query: 301 VKAKDFLLKCLEKEPDLRPTASELLKHPFVT 331
+ DF +CL+K RPT EL++HPF T
Sbjct: 241 AEFVDFTSQCLKKNSKERPTYPELMQHPFFT 271
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 28/270 (10%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH--P 131
+G G G+V+ +G ++AVKQ+ + N ++ SH P
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRI--------LMDLDVVLKSHDCP 84
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKF--GPFPEAVMRTYTKQLLLGLEYL-H 188
IV+ GT + I +E + G+ + L K GP PE ++ T ++ L YL
Sbjct: 85 YIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE 142
Query: 189 NHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI--- 245
HG++HRD+K +NIL+D +G IKL DFG S L G +MAPE I
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGIS---GRLVDDKAKDRSAGCAAYMAPERIDPP 199
Query: 246 --RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPP-IPENLSVK 302
+ + AD+WS+G +++E+ATG+ P+ + L + + PP +P ++
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV--LQEEPPLLPGHMGFS 257
Query: 303 A--KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ F+ CL K+ RP ++LL+H F+
Sbjct: 258 GDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 133/299 (44%), Gaps = 54/299 (18%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 58
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 172
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 29/288 (10%)
Query: 56 ISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVK----QVLIAANFASKEKA 111
+ P V M+ + +L+G G FG+V + +G A+K +V++A
Sbjct: 3 MDPRVTMN---EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--------- 50
Query: 112 QDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEA 171
+D + HP + + + + L ++E+ GG + L + F E
Sbjct: 51 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED 110
Query: 172 VMRTYTKQLLLGLEYLHNH-GIMHRDIKGANILVDNKGCIKLADFGASKQ-VAELATVSG 229
R Y +++ L+YLH+ +++RD+K N+++D G IK+ DFG K+ + + AT+
Sbjct: 111 RARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM-- 168
Query: 230 AKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT 289
K GTP ++APEV+ + + D W +G + EM G+ P+ Q E LF +
Sbjct: 169 -KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL-IL 224
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLR-----PTASELLKHPFVTG 332
P L +AK L L+K+P R A E+++H F G
Sbjct: 225 MEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 272
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 127/272 (46%), Gaps = 26/272 (9%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVK----QVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+L+G G FG+V + +G A+K +V++A +D +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA---------KDEVAHTLTENRVLQN 64
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP + + + + L ++E+ GG + L + F E R Y +++ L+YL
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 124
Query: 188 HNH-GIMHRDIKGANILVDNKGCIKLADFGASKQ-VAELATVSGAKSMKGTPYWMAPEVI 245
H+ +++RD+K N+++D G IK+ DFG K+ + + AT+ K GTP ++APEV+
Sbjct: 125 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPEYLAPEVL 181
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ + D W +G + EM G+ P+ Q E LF + P L +AK
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL-ILMEEIRFPRTLGPEAKS 238
Query: 306 FLLKCLEKEPDLR-----PTASELLKHPFVTG 332
L L+K+P R A E+++H F G
Sbjct: 239 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 270
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 127/272 (46%), Gaps = 26/272 (9%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVK----QVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+L+G G FG+V + +G A+K +V++A +D +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA---------KDEVAHTLTENRVLQN 65
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HP + + + + L ++E+ GG + L + F E R Y +++ L+YL
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 125
Query: 188 HNH-GIMHRDIKGANILVDNKGCIKLADFGASKQ-VAELATVSGAKSMKGTPYWMAPEVI 245
H+ +++RD+K N+++D G IK+ DFG K+ + + AT+ K GTP ++APEV+
Sbjct: 126 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPEYLAPEVL 182
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ + D W +G + EM G+ P+ Q E LF + P L +AK
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL-ILMEEIRFPRTLGPEAKS 239
Query: 306 FLLKCLEKEPDLR-----PTASELLKHPFVTG 332
L L+K+P R A E+++H F G
Sbjct: 240 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 271
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 8/209 (3%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
SHPNI++ ++++LE V GG + + + G + E KQ+L + YLH
Sbjct: 106 SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 189 NHGIMHRDIKGANILVDN---KGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
+GI+HRD+K N+L +K+ADFG SK V + K++ GTP + APE++
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM---KTVCGTPGYCAPEIL 222
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSH--PPIPENLSVKA 303
R + D+WSVG + G P+ + + I + + P + +S+ A
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNA 282
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFVTG 332
KD + K + +P R T + L+HP+VTG
Sbjct: 283 KDLVRKLIVLDPKKRLTTFQALQHPWVTG 311
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 136/310 (43%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKE 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ E V S+L G P ++++Y QLL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 117
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 175
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 291 Q-DVTKPVPH 299
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 137/270 (50%), Gaps = 16/270 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
++IG GAFG V + + + ++ A+K + + F +++ + P
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMK---LLSKFEMIKRSDSAFFWEERDIMAFA--NSP 129
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
+V+ +++ L +++E++PGG + +L+ + PE R YT +++L L+ +H+ G
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMG 188
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR-QTGH 250
+HRD+K N+L+D G +KLADFG ++ + V ++ GTP +++PEV++ Q G
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 247
Query: 251 SY---SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE--NLSVKAKD 305
Y D WSVG + EM G P+ V I K+ P+ ++S +AK+
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYAD-SLVGTYSKIMNHKNSLTFPDDNDISKEAKN 306
Query: 306 FLLKCL-EKEPDL-RPTASELLKHPFVTGD 333
+ L ++E L R E+ +H F D
Sbjct: 307 LICAFLTDREVRLGRNGVEEIKRHLFFKND 336
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 20/281 (7%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+R G L+G G FG V+ G L +A+K V+ D +
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIK-VIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 128 XS---HPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLG 183
+ HP ++R L +E ++LE +P + + + GP E R + Q++
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 184 LEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
+++ H+ G++HRDIK NIL+D +GC KL DFG+ + + GT + P
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD----EPYTDFDGTRVYSPP 207
Query: 243 EVI-RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSV 301
E I R H+ A +WS+G + +M G P+ + + + A H P ++S
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELH---------FPAHVSP 258
Query: 302 KAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHAS 342
+ +CL +P RP+ E+L P++ ED L+ S
Sbjct: 259 DCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPS 299
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 136/310 (43%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+ ++ + + +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRL------DTETEGVPSTAIREISLLKE 58
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAP 172
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 288 Q-DVTKPVPH 296
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 136/310 (43%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+ ++ + + +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRL------DTETEGVPSTAIREISLLKE 57
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ EF+ S+L G P ++++Y QLL
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 113
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAP 171
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 287 Q-DVTKPVPH 295
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 136/310 (43%), Gaps = 55/310 (17%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K E IG G +G VY N +GE++A+K++ + + +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 57
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGG-----SISSLLGKFGPFPEAVMRTYTKQLLL 182
+HPNIV+ L + E L ++ E V S+L G P ++++Y QLL
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG----IPLPLIKSYLFQLLQ 113
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
GL + H+H ++HRD+K N+L++ +G IKLADFG ++ V T ++ AP
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAP 171
Query: 243 EVIRQTG-HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT------------ 289
E++ +S + DIWS+GC EM T + + E+ LF I T
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 290 -------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
K PP+ E+ + L + L +P+ R +A L HPF
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDED----GRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 331 TGDDEDPVLH 340
D PV H
Sbjct: 287 Q-DVTKPVPH 295
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 137/270 (50%), Gaps = 16/270 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
++IG GAFG V + + + ++ A+K + + F +++ + P
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMK---LLSKFEMIKRSDSAFFWEERDIMAFA--NSP 134
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
+V+ +++ L +++E++PGG + +L+ + PE R YT +++L L+ +H+ G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG 193
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR-QTGH 250
+HRD+K N+L+D G +KLADFG ++ + V ++ GTP +++PEV++ Q G
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 251 SY---SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE--NLSVKAKD 305
Y D WSVG + EM G P+ V I K+ P+ ++S +AK+
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYAD-SLVGTYSKIMNHKNSLTFPDDNDISKEAKN 311
Query: 306 FLLKCL-EKEPDL-RPTASELLKHPFVTGD 333
+ L ++E L R E+ +H F D
Sbjct: 312 LICAFLTDREVRLGRNGVEEIKRHLFFKND 341
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML------ 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
++G G+FG+V + ++G+L AVK VL + + +HP
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVK-VLKKDVILQDDDVE---CTMTEKRILSLARNHPF 85
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
+ + + + L ++EFV GG + + K F EA R Y +++ L +LH+ GI
Sbjct: 86 LTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGI 145
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSY 252
++RD+K N+L+D++G KLADFG K+ + + GTP ++APE++++ +
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFGMCKE--GICNGVTTATFCGTPDYIAPEILQEMLYGP 203
Query: 253 SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLE 312
+ D W++G + EM G P+ + ++ LF P L A L +
Sbjct: 204 AVDWWAMGVLLYEMLCGHAPFEAENED--DLFE-AILNDEVVYPTWLHEDATGILKSFMT 260
Query: 313 KEPDLRPTA------SELLKHPFVTGDDEDPVLHASV 343
K P +R + +L+HPF D + H +
Sbjct: 261 KNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQI 297
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 123/268 (45%), Gaps = 26/268 (9%)
Query: 66 IRWRKGEL-IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
+ W +L +G G+FG V+ + +G AVK+V + A + A +
Sbjct: 92 VHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGL--------- 142
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGL 184
+ P IV G VRE +NI +E + GGS+ L+ + G PE Y Q L GL
Sbjct: 143 ----TSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGL 198
Query: 185 EYLHNHGIMHRDIKGANILVDNKGC-IKLADFGASKQVAELA---TVSGAKSMKGTPYWM 240
EYLH+ I+H D+K N+L+ + G L DFG + + ++ + GT M
Sbjct: 199 EYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHM 258
Query: 241 APEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPP----IP 296
APEV+ D+WS C ++ M G PW+Q ++ L S PP IP
Sbjct: 259 APEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL----KIASEPPPVREIP 314
Query: 297 ENLSVKAKDFLLKCLEKEPDLRPTASEL 324
+ + + + L KEP R +A+EL
Sbjct: 315 PSCAPLTAQAIQEGLRKEPIHRVSAAEL 342
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 20/264 (7%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G+F VY G LD+ + V + +K + Q HPNI
Sbjct: 34 IGRGSFKTVYKG--LDTETTVEVAWCELQDRKLTKSERQRF----KEEAEXLKGLQHPNI 87
Query: 134 VRYL----GTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
VR+ TV+ ++ + ++ E G++ + L +F V+R++ +Q+L GL++LH
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 190 HG--IMHRDIKGANILVDN-KGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
I+HRD+K NI + G +K+ D G +A L S AK++ GTP + APE
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLG----LATLKRASFAKAVIGTPEFXAPEXYE 203
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSV-KAKD 305
+ + S D+++ G +E AT + P+S + Q A ++ T+ P + +++ + K+
Sbjct: 204 EK-YDESVDVYAFGXCXLEXATSEYPYS-ECQNAAQIYRRVTSGVKPASFDKVAIPEVKE 261
Query: 306 FLLKCLEKEPDLRPTASELLKHPF 329
+ C+ + D R + +LL H F
Sbjct: 262 IIEGCIRQNKDERYSIKDLLNHAF 285
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 137/270 (50%), Gaps = 16/270 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
++IG GAFG V + + + ++ A+K + + F +++ + P
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMK---LLSKFEMIKRSDSAFFWEERDIMAFA--NSP 134
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
+V+ +++ L +++E++PGG + +L+ + PE R YT +++L L+ +H+ G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG 193
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR-QTGH 250
+HRD+K N+L+D G +KLADFG ++ + V ++ GTP +++PEV++ Q G
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 251 SY---SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE--NLSVKAKD 305
Y D WSVG + EM G P+ V I K+ P+ ++S +AK+
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYAD-SLVGTYSKIMNHKNSLTFPDDNDISKEAKN 311
Query: 306 FLLKCL-EKEPDL-RPTASELLKHPFVTGD 333
+ L ++E L R E+ +H F D
Sbjct: 312 LICAFLTDREVRLGRNGVEEIKRHLFFKND 341
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML------ 62
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 123/271 (45%), Gaps = 32/271 (11%)
Query: 66 IRWRKGEL-IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
+ W +L +G G+FG V+ + +G AVK+V + A + A
Sbjct: 73 VHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMA------------- 119
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGL 184
+ P IV G VRE +NI +E + GGS+ L+ + G PE Y Q L GL
Sbjct: 120 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGL 179
Query: 185 EYLHNHGIMHRDIKGANILVDNKGC-IKLADFGASKQVA------ELATVSGAKSMKGTP 237
EYLH+ I+H D+K N+L+ + G L DFG + + +L T + GT
Sbjct: 180 EYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT---GDYIPGTE 236
Query: 238 YWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPP--- 294
MAPEV+ D+WS C ++ M G PW+Q ++ L S PP
Sbjct: 237 THMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL----KIASEPPPVR 292
Query: 295 -IPENLSVKAKDFLLKCLEKEPDLRPTASEL 324
IP + + + + L KEP R +A+EL
Sbjct: 293 EIPPSCAPLTAQAIQEGLRKEPIHRVSAAEL 323
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 62
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML------ 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 12/264 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G GAF V + + +G+ A K + K A+DH HP
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKII-----NTKKLSARDH-QKLEREARICRLLKHP 81
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
NIVR ++ EE ++ + V GG + + + EA +Q+L + + H G
Sbjct: 82 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 192 IMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
++HRD+K N+L+ +K +KLADFG + +V GTP +++PEV+R+
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE--GEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 249 GHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+ D+W+ G + + G PP W + + G P + ++ +AKD +
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI 259
Query: 308 LKCLEKEPDLRPTASELLKHPFVT 331
K L P R TA+E LKHP+++
Sbjct: 260 NKMLTINPSKRITAAEALKHPWIS 283
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 60
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 61 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 120 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 137/302 (45%), Gaps = 55/302 (18%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
I + ++IG G+FG V+ ++S E+ A+K+VL F ++E I
Sbjct: 40 IAYTNCKVIGNGSFGVVFQAKLVESDEV-AIKKVLQDKRFKNRELQIMRIV--------- 89
Query: 126 XXXSHPNIVRYL------GTVREEESLNILLEFVPGGSI--SSLLGKFG-PFPEAVMRTY 176
HPN+V G ++E LN++LE+VP S K P +++ Y
Sbjct: 90 ---KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY 146
Query: 177 TKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASK-QVAELATVSGAKSMK 234
QLL L Y+H+ GI HRDIK N+L+D G +KL DFG++K +A VS S
Sbjct: 147 MYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR- 205
Query: 235 GTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
Y+ APE+I T ++ + DIWS GC + E+ G+P P ++ + + T S
Sbjct: 206 ---YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPS 262
Query: 292 HPPI----PENLSVK--------------------AKDFLLKCLEKEPDLRPTASELLKH 327
I P + K A D + + LE P R TA E L H
Sbjct: 263 REQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322
Query: 328 PF 329
PF
Sbjct: 323 PF 324
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 133/304 (43%), Gaps = 36/304 (11%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+ + ++LE V GG + L + E ++ KQ+L G+ YLH
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 190 HGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIV 190
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
AD+WS+G + +G P+ QE A + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASVMKSSEILSPSHVANLESLQML 364
DF+ K L KE R T E L+HP++T D A V + S V NLE+ +
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWITPVDTQ---QAMVRRES-------VVNLENFKKQ 300
Query: 365 TSPG----SPGSVDICNLDSLSCSRVIVEKLSGSMHGWVTSNSNDDL--CQLDQEDFVAG 418
S V +CN L+ S+ V +++DL C+ D E+ +A
Sbjct: 301 YVRRRWKLSFSIVSLCN------------HLTRSLMKKVHLRTSEDLRNCESDTEENIAR 348
Query: 419 DRKL 422
+ L
Sbjct: 349 RKAL 352
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 36/277 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFAS--------KEKAQDHIXXX 118
R+ GE++G G V++ +L +AVK ++ A+ A + +AQ+
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVK--VLRADLARDPSFYLRFRREAQN----- 65
Query: 119 XXXXXXXXXXSHPNIVRYLGTVREEESLN----ILLEFVPGGSISSLLGKFGPFPEAVMR 174
+HP IV T E I++E+V G ++ ++ GP
Sbjct: 66 ------AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 175 TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA-TVSGAKSM 233
L + H +GI+HRD+K ANI++ +K+ DFG ++ +A+ +V+ ++
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 234 KGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHP 293
GT +++PE R +D++S+GC + E+ TG+PP++ + A H+
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHV----RED 235
Query: 294 PIP-----ENLSVKAKDFLLKCLEKEPDLR-PTASEL 324
PIP E LS +LK L K P+ R TA+E+
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 62
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 62
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 62
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 62
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 62
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAML------ 62
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G FG + + + EL+AVK + A A E Q I HPNI
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGA--AIDENVQREIINHRSL-------RHPNI 78
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
VR+ + L I++E+ GG + + G F E R + +QLL G+ Y H+ I
Sbjct: 79 VRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQIC 138
Query: 194 HRDIKGANILVDNKGC--IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV-IRQTGH 250
HRD+K N L+D +K+ DFG SK S KS GTP ++APEV +RQ
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSS---VLHSQPKSTVGTPAYIAPEVLLRQEYD 195
Query: 251 SYSADIWSVGCTVIEMATGKPPW 273
AD+WS G T+ M G P+
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPF 218
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 11/266 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQD-HIXXXXXXXXXXXXXSH 130
++IG G V ++ +G AVK + + A S E+ ++ H
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
P+I+ + + + ++ + + G + L + E R+ + LL + +LH +
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN 219
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR---- 246
I+HRD+K NIL+D+ I+L+DFG S L + + GTP ++APE+++
Sbjct: 220 NIVHRDLKPENILLDDNMQIRLSDFGFS---CHLEPGEKLRELCGTPGYLAPEILKCSMD 276
Query: 247 --QTGHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
G+ D+W+ G + + G PP W ++ + + G + P ++ S
Sbjct: 277 ETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTV 336
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPF 329
KD + + L+ +P+ R TA + L+HPF
Sbjct: 337 KDLISRLLQVDPEARLTAEQALQHPF 362
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 129/294 (43%), Gaps = 33/294 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG GA+G VY + SG +A+K V + HPN+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 134 VRYL---GTVREEESLNILLEFVP-GGSISSLLGKFGP--FPEAVMRTYTKQLLLGLEYL 187
VR + T R + + + L F + + L K P P ++ +Q L GL++L
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 136
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H + I+HRD+K NILV + G +KLADFG ++ + ++ + T ++ APEV+ Q
Sbjct: 137 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALT---PVVVTLWYRAPEVLLQ 193
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPW--SQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ ++ D+WSVGC EM KP + + + ++ +F + P ++S+
Sbjct: 194 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 253
Query: 306 F----------------------LLKCLEKEPDLRPTASELLKHPFVTGDDEDP 337
F LL+ L P R +A L+H ++ D+ +P
Sbjct: 254 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 307
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 127/277 (45%), Gaps = 36/277 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFAS--------KEKAQDHIXXX 118
R+ GE++G G V++ +L +AVK ++ A+ A + +AQ+
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVK--VLRADLARDPSFYLRFRREAQN----- 65
Query: 119 XXXXXXXXXXSHPNIVRYLGTVREEESLN----ILLEFVPGGSISSLLGKFGPFPEAVMR 174
+HP IV T E I++E+V G ++ ++ GP
Sbjct: 66 ------AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 175 TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA-TVSGAKSM 233
L + H +GI+HRD+K ANIL+ +K+ DFG ++ +A+ +V ++
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAV 179
Query: 234 KGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHP 293
GT +++PE R +D++S+GC + E+ TG+PP++ A H+
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV----RED 235
Query: 294 PIP-----ENLSVKAKDFLLKCLEKEPDLR-PTASEL 324
PIP E LS +LK L K P+ R TA+E+
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HPN+V+ + + + E+ L ++ E V G + + P E R Y + L+ G+EYL
Sbjct: 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTLKPLSEDQARFYFQDLIKGIEYL 153
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H I+HRDIK +N+LV G IK+ADFG S + + + + GTP +MAPE + +
Sbjct: 154 HYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK--GSDALLSNTVGTPAFMAPESLSE 211
Query: 248 TGHSYSA---DIWSVGCTVIEMATGKPPWSQQYQEVAALFH--IGTTKSHPPIPENLSVK 302
T +S D+W++G T+ G+ P+ E H I + P +++
Sbjct: 212 TRKIFSGKALDVWAMGVTLYCFVFGQCPFM---DERIMCLHSKIKSQALEFPDQPDIAED 268
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVT 331
KD + + L+K P+ R E+ HP+VT
Sbjct: 269 LKDLITRMLDKNPESRIVVPEIKLHPWVT 297
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQV----LIAANFASKEKAQDHIXXXXXXXXXXXX 127
E +G GAF V ++ +G A K + L A +F E+
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER----------EARICRK 84
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HPNIVR +++EE ++ + V GG + + + EA +Q+L + Y
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 144
Query: 188 HNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
H++GI+HR++K N+L+ +K +KLADFG + +V + G GTP +++PEV
Sbjct: 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEV 201
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+++ +S DIW+ G + + G PP W + + A G P + ++ +A
Sbjct: 202 LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 261
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
K + L P R TA + LK P++
Sbjct: 262 KSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 14/269 (5%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
+IG G FG VY D+G++ A+K + ++ + P
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 252
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
IV + L+ +L+ + GG + L + G F EA MR Y +++LGLE++HN +
Sbjct: 253 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 312
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSY 252
++RD+K ANIL+D G ++++D G + ++ + GT +MAPEV+ Q G +Y
Sbjct: 313 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVL-QKGVAY 367
Query: 253 --SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKC 310
SAD +S+GC + ++ G P+ Q + T +P++ S + + L
Sbjct: 368 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 427
Query: 311 LEKEPDLR-----PTASELLKHPFVTGDD 334
L+++ + R A E+ + PF D
Sbjct: 428 LQRDVNRRLGCLGRGAQEVKESPFFRSLD 456
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 14/269 (5%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
+IG G FG VY D+G++ A+K + ++ + P
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
IV + L+ +L+ + GG + L + G F EA MR Y +++LGLE++HN +
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSY 252
++RD+K ANIL+D G ++++D G + ++ + GT +MAPEV+ Q G +Y
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVL-QKGVAY 368
Query: 253 --SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKC 310
SAD +S+GC + ++ G P+ Q + T +P++ S + + L
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 428
Query: 311 LEKEPDLR-----PTASELLKHPFVTGDD 334
L+++ + R A E+ + PF D
Sbjct: 429 LQRDVNRRLGCLGRGAQEVKESPFFRSLD 457
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQV----LIAANFASKEKAQDHIXXXXXXXXXXXX 127
E +G GAF V ++ +G A K + L A +F E+
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER----------EARICRK 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HPNIVR +++EE ++ + V GG + + + EA +Q+L + Y
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 188 HNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
H++GI+HR++K N+L+ +K +KLADFG + +V + G GTP +++PEV
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEV 178
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+++ +S DIW+ G + + G PP W + + A G P + ++ +A
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
K + L P R TA + LK P++
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 36/277 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFAS--------KEKAQDHIXXX 118
R+ GE++G G V++ +L +AVK ++ A+ A + +AQ+
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVK--VLRADLARDPSFYLRFRREAQN----- 65
Query: 119 XXXXXXXXXXSHPNIVRYLGTVREEESLN----ILLEFVPGGSISSLLGKFGPFPEAVMR 174
+HP IV T E I++E+V G ++ ++ GP
Sbjct: 66 ------AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 175 TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA-TVSGAKSM 233
L + H +GI+HRD+K ANI++ +K+ DFG ++ +A+ +V+ ++
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 234 KGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHP 293
GT +++PE R +D++S+GC + E+ TG+PP++ A H+
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV----RED 235
Query: 294 PIP-----ENLSVKAKDFLLKCLEKEPDLR-PTASEL 324
PIP E LS +LK L K P+ R TA+E+
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQV----LIAANFASKEKAQDHIXXXXXXXXXXXX 127
E +G GAF V ++ +G A K + L A +F E+
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER----------EARICRK 60
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HPNIVR +++EE ++ + V GG + + + EA +Q+L + Y
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 188 HNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
H++GI+HR++K N+L+ +K +KLADFG + +V + G GTP +++PEV
Sbjct: 121 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEV 177
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+++ +S DIW+ G + + G PP W + + A G P + ++ +A
Sbjct: 178 LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 237
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
K + L P R TA + LK P++
Sbjct: 238 KSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 9/206 (4%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
+IG G FG VY D+G++ A+K + ++ + P
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
IV + L+ +L+ + GG + L + G F EA MR Y +++LGLE++HN +
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSY 252
++RD+K ANIL+D G ++++D G + ++ + GT +MAPEV+ Q G +Y
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVL-QKGVAY 368
Query: 253 --SADIWSVGCTVIEMATGKPPWSQQ 276
SAD +S+GC + ++ G P+ Q
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPFRQH 394
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 9/206 (4%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
+IG G FG VY D+G++ A+K + ++ + P
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
IV + L+ +L+ + GG + L + G F EA MR Y +++LGLE++HN +
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSY 252
++RD+K ANIL+D G ++++D G + ++ + GT +MAPEV+ Q G +Y
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVL-QKGVAY 368
Query: 253 --SADIWSVGCTVIEMATGKPPWSQQ 276
SAD +S+GC + ++ G P+ Q
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPFRQH 394
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 21/281 (7%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQV-LIAANFASKEKAQDHIXXXXXXXXXXX 126
+R + IG G F +V + ++ +G+ +AVK + N +S +K +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL----- 70
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
+HPNIV+ + E++L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 71 --NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H I+HRD+K N+L+D IK+ADFG S E + + G+P + APE+ +
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFCGSPPYAAPELFQ 185
Query: 247 QTGHSY---SADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
G Y D+WS+G + + +G P+ Q +E+ G + IP +S
Sbjct: 186 --GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTD 239
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASV 343
++ L K L P R T +++K ++ ED L V
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYV 280
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQV----LIAANFASKEKAQDHIXXXXXXXXXXXX 127
E +G GAF V ++ +G A K + L A +F E+
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER----------EARICRK 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HPNIVR +++EE ++ + V GG + + + EA +Q+L + Y
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 188 HNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
H++GI+HR++K N+L+ +K +KLADFG + +V + G GTP +++PEV
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEV 178
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+++ +S DIW+ G + + G PP W + + A G P + ++ +A
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
K + L P R TA + LK P++
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W + +G GA G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------ 61
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
+H N+V++ G RE + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI-R 246
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++ R
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQ 275
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 21/281 (7%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQV-LIAANFASKEKAQDHIXXXXXXXXXXX 126
+R + IG G F +V + ++ +G+ +AVK + N +S +K +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL----- 70
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
+HPNIV+ + E++L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 71 --NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H I+HRD+K N+L+D IK+ADFG S E + + G+P + APE+ +
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFCGSPPYAAPELFQ 185
Query: 247 QTGHSY---SADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
G Y D+WS+G + + +G P+ Q +E+ G + IP +S
Sbjct: 186 --GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTD 239
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASV 343
++ L K L P R T +++K ++ ED L V
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYV 280
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 28/280 (10%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDH---IXXXXXXXXX 124
+R + IG G F +V + ++ +G +A+K + +K Q + +
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKII---------DKTQLNPTSLQKLFREVRI 64
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGL 184
+HPNIV+ + E++L +++E+ GG + L G E R+ +Q++ +
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV 124
Query: 185 EYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA-KSMKGTPYWMAPE 243
+Y H I+HRD+K N+L+D IK+ADFG S + TV G + G+P + APE
Sbjct: 125 QYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF----TVGGKLDTFCGSPPYAAPE 180
Query: 244 VIRQTGHSY---SADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENL 299
+ + G Y D+WS+G + + +G P+ Q +E+ G + IP +
Sbjct: 181 LFQ--GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYM 234
Query: 300 SVKAKDFLLKCLEKEPDLRPTASELLKHPFV-TGDDEDPV 338
S ++ L + L P R T +++K ++ G +ED +
Sbjct: 235 STDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 274
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI++ +++ ++ EF GG + + F E KQ+L G+ YLH
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHK 164
Query: 190 HGIMHRDIKGANILVDNKGC---IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H I+HRDIK NIL++NK IK+ DFG S + + + GT Y++APEV++
Sbjct: 165 HNIVHRDIKPENILLENKNSLLNIKIVDFGLS---SFFSKDYKLRDRLGTAYYIAPEVLK 221
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ ++ D+WS G + + G PP+ Q Q++ G +N+S +AK+
Sbjct: 222 KK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKE 280
Query: 306 FLLKCLEKEPDLRPTASELL 325
+ L + + R TA E L
Sbjct: 281 LIKLMLTYDYNKRCTAEEAL 300
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 16/266 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ +G G FG+V +G + +G +AVK + K ++ D + H
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKIL-----NRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
P+I++ + +++E+V GG + + K G E R +Q+L ++Y H H
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGH 250
++HRD+K N+L+D K+ADFG S +++ + ++ G+P + APEVI +G
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL---RTSCGSPNYAAPEVI--SGR 185
Query: 251 SYS---ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
Y+ DIWS G + + G P+ ++ V LF IPE L+ L
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEH--VPTLFK-KIRGGVFYIPEYLNRSVATLL 242
Query: 308 LKCLEKEPDLRPTASELLKHPFVTGD 333
+ L+ +P R T ++ +H + D
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
GE++G G FG+ + ++GE++ +K+++ E+ Q H
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELI-----RFDEETQ---RTFLKEVKVMRCLEH 66
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PN+++++G + +++ LN + E++ GG++ ++ +P + ++ K + G+ YLH+
Sbjct: 67 PNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASK-QVAELATVSGAKSMK-----------GTP 237
I+HRD+ N LV + +ADFG ++ V E G +S+K G P
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 238 YWMAPEVIRQTGHSYSADIWSVG---CTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPP 294
YWMAPE+I + D++S G C +I P + + + + PP
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPP 246
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASEL 324
N ++C + +P+ RP+ +L
Sbjct: 247 ---NCPPSFFPITVRCCDLDPEKRPSFVKL 273
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 36/277 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFAS--------KEKAQDHIXXX 118
R+ GE++G G V++ +L +AVK ++ A+ A + +AQ+
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVK--VLRADLARDPSFYLRFRREAQN----- 65
Query: 119 XXXXXXXXXXSHPNIVRYLGTVREEESLN----ILLEFVPGGSISSLLGKFGPFPEAVMR 174
+HP IV T E I++E+V G ++ ++ GP
Sbjct: 66 ------AAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 175 TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA-TVSGAKSM 233
L + H +GI+HRD+K ANI++ +K+ DFG ++ +A+ +V+ ++
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 234 KGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHP 293
GT +++PE R +D++S+GC + E+ TG+PP++ A H+
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV----RED 235
Query: 294 PIP-----ENLSVKAKDFLLKCLEKEPDLR-PTASEL 324
PIP E LS +LK L K P+ R TA+E+
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 44/298 (14%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG GA+G VY + SG +A+K V + +E HPN+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNG---EEGLPISTVREVALLRRLEAFEHPNV 68
Query: 134 VRYL---GTVREEESLNILLEFVP-GGSISSLLGKFGP--FPEAVMRTYTKQLLLGLEYL 187
VR + T R + + + L F + + L K P P ++ +Q L GL++L
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASK----QVAELATVSGAKSMKGTPYWMAPE 243
H + I+HRD+K NILV + G +KLADFG ++ Q+A V T ++ APE
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-------TLWYRAPE 181
Query: 244 VIRQTGHSYSADIWSVGCTVIEMATGKPPW--SQQYQEVAALFHIGTTKSHPPIPENLSV 301
V+ Q+ ++ D+WSVGC EM KP + + + ++ +F + P ++S+
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 302 KAKDF----------------------LLKCLEKEPDLRPTASELLKHPFVTGDDEDP 337
F LL+ L P R +A L+H ++ D+ +P
Sbjct: 242 PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 74 IGCGAFGRV----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG+V Y N +GE++AVK + + H
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-------KADCGPQHRSGWKQEIDILRTLY 74
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
H +I++Y G + E+SL +++E+VP GS+ L + A + + +Q+ G+ YL
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYL 133
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVIR 246
H+ +HR++ N+L+DN +K+ DFG +K V E + +P +W APE ++
Sbjct: 134 HSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 247 QTGHSYSADIWSVGCTVIEMATG-----KPP--------WSQQYQEVAALFHIGTTKSHP 293
+ Y++D+WS G T+ E+ T PP +Q V L +
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL 253
Query: 294 PIPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P P+ + + C E E RPT L+
Sbjct: 254 PRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 144/298 (48%), Gaps = 16/298 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
++IG GAFG V + ++ ++ A+K I + ++A+
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMK---ILNKWEMLKRAETACFREERDVLVNGDSKWI 136
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHNH 190
+ Y +++ +L +++++ GG + +LL KF PE + R Y ++++ ++ +H
Sbjct: 137 TTLHY--AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL 194
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR---- 246
+HRDIK NIL+D G I+LADFG+ ++ E TV + ++ GTP +++PE+++
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQAMEG 253
Query: 247 -QTGHSYSADIWSVGCTVIEMATGKPPWSQQ--YQEVAALFHIGTTKSHPPIPENLSVKA 303
+ + D WS+G + EM G+ P+ + + + + P ++S A
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENA 313
Query: 304 KDFL--LKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASVMKSSEILSPSHVANLE 359
KD + L C + + + KHPF +G D D + + E+ SP+ +N +
Sbjct: 314 KDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFD 371
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 39/299 (13%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++K E +G G +G VY + G ++A+K++ + A + +
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA------EDEGIPSTAIREISLLK 74
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
HPNIV + + E L ++ EF+ L ++ ++ Y QLL G+ +
Sbjct: 75 ELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H H I+HRD+K N+L+++ G +KLADFG ++ V T ++ AP+V+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLARAFG--IPVRSYTHEVVTLWYRAPDVLM 192
Query: 247 QT-GHSYSADIWSVGCTVIEMATGKP--------------------PWSQQYQEVAAL-- 283
+ +S S DIWS+GC EM TGKP P +++ +V L
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252
Query: 284 -----FHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDP 337
F + K I + D L L +P+ R +A + + HP+ D DP
Sbjct: 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK--DLDP 309
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 133/280 (47%), Gaps = 28/280 (10%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDH---IXXXXXXXXX 124
+R + IG G F +V + ++ +G +A+K + +K Q + +
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKII---------DKTQLNPTSLQKLFREVRI 67
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGL 184
+HPNIV+ + E++L +++E+ GG + L G E R+ +Q++ +
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV 127
Query: 185 EYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA-KSMKGTPYWMAPE 243
+Y H I+HRD+K N+L+D IK+ADFG S + TV G + G P + APE
Sbjct: 128 QYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF----TVGGKLDAFCGAPPYAAPE 183
Query: 244 VIRQTGHSY---SADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENL 299
+ + G Y D+WS+G + + +G P+ Q +E+ G + IP +
Sbjct: 184 LFQ--GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYM 237
Query: 300 SVKAKDFLLKCLEKEPDLRPTASELLKHPFV-TGDDEDPV 338
S ++ L + L P R T +++K ++ G +ED +
Sbjct: 238 STDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 277
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 131/294 (44%), Gaps = 36/294 (12%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG GA+G VY + SG +A+K V + +E HPN+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNG---EEGLPISTVREVALLRRLEAFEHPNV 68
Query: 134 VRYL---GTVREEESLNILLEFVP-GGSISSLLGKFGP--FPEAVMRTYTKQLLLGLEYL 187
VR + T R + + + L F + + L K P P ++ +Q L GL++L
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H + I+HRD+K NILV + G +KLADFG ++ + ++ + T ++ APEV+ Q
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALA---PVVVTLWYRAPEVLLQ 185
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPW--SQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ ++ D+WSVGC EM KP + + + ++ +F + P ++S+
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 245
Query: 306 F----------------------LLKCLEKEPDLRPTASELLKHPFVTGDDEDP 337
F LL+ L P R +A L+H ++ D+ +P
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 21/281 (7%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQV-LIAANFASKEKAQDHIXXXXXXXXXXX 126
+R + IG G F +V + ++ +G+ +AV+ + N +S +K +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL----- 70
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
+HPNIV+ + E++L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 71 --NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H I+HRD+K N+L+D IK+ADFG S E + + G+P + APE+ +
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFCGSPPYAAPELFQ 185
Query: 247 QTGHSY---SADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
G Y D+WS+G + + +G P+ Q +E+ G + IP +S
Sbjct: 186 --GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTD 239
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASV 343
++ L K L P R T +++K ++ ED L V
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYV 280
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 39/299 (13%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++K E +G G +G VY + G ++A+K++ + A + +
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA------EDEGIPSTAIREISLLK 74
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
HPNIV + + E L ++ EF+ L ++ ++ Y QLL G+ +
Sbjct: 75 ELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H H I+HRD+K N+L+++ G +KLADFG ++ V T ++ AP+V+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLARAFG--IPVRSYTHEVVTLWYRAPDVLM 192
Query: 247 QT-GHSYSADIWSVGCTVIEMATGKP--------------------PWSQQYQEVAAL-- 283
+ +S S DIWS+GC EM TGKP P +++ +V L
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252
Query: 284 -----FHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDP 337
F + K I + D L L +P+ R +A + + HP+ D DP
Sbjct: 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK--DLDP 309
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 131/281 (46%), Gaps = 21/281 (7%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQV-LIAANFASKEKAQDHIXXXXXXXXXXX 126
+R + IG G F +V + ++ +G+ +AVK + N +S +K +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL----- 70
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
+HPNIV+ + E++L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 71 --NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H I+HRD+K N+L+D IK+ADFG S E + + G P + APE+ +
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDAFCGAPPYAAPELFQ 185
Query: 247 QTGHSY---SADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
G Y D+WS+G + + +G P+ Q +E+ G + IP +S
Sbjct: 186 --GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTD 239
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASV 343
++ L K L P R T +++K ++ ED L V
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYV 280
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 36/277 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFAS--------KEKAQDHIXXX 118
R+ GE++G G V++ +L +AVK ++ A+ A + +AQ+
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVK--VLRADLARDPSFYLRFRREAQN----- 65
Query: 119 XXXXXXXXXXSHPNIVRYLGTVREEESLN----ILLEFVPGGSISSLLGKFGPFPEAVMR 174
+HP IV T E I++E+V G ++ ++ GP
Sbjct: 66 ------AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 175 TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA-TVSGAKSM 233
L + H +GI+HRD+K ANI++ +K+ DFG ++ +A+ +V+ ++
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 234 KGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHP 293
GT +++PE R +D++S+GC + E+ TG+PP++ A H+
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV----RED 235
Query: 294 PIP-----ENLSVKAKDFLLKCLEKEPDLR-PTASEL 324
PIP E LS +LK L K P+ R TA+E+
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 16/266 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ +G G FG+V +G + +G +AVK + K ++ D + H
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKIL-----NRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
P+I++ + +++E+V GG + + K G E R +Q+L ++Y H H
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGH 250
++HRD+K N+L+D K+ADFG S +++ + + G+P + APEVI +G
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL---RDSCGSPNYAAPEVI--SGR 185
Query: 251 SYS---ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
Y+ DIWS G + + G P+ ++ V LF IPE L+ L
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEH--VPTLFK-KIRGGVFYIPEYLNRSVATLL 242
Query: 308 LKCLEKEPDLRPTASELLKHPFVTGD 333
+ L+ +P R T ++ +H + D
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 28/272 (10%)
Query: 74 IGCGAFGRV----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG+V Y N +GE++AVK + + H
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-------KADCGPQHRSGWKQEIDILRTLY 74
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
H +I++Y G + E+SL +++E+VP GS+ L + A + + +Q+ G+ YL
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYL 133
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVIR 246
H +HR++ N+L+DN +K+ DFG +K V E + +P +W APE ++
Sbjct: 134 HAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 247 QTGHSYSADIWSVGCTVIEMATG-----KPP--------WSQQYQEVAALFHIGTTKSHP 293
+ Y++D+WS G T+ E+ T PP +Q V L +
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL 253
Query: 294 PIPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P P+ + + C E E RPT L+
Sbjct: 254 PRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 36/294 (12%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG GA+G VY + SG +A+K V + +E HPN+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNG---EEGLPISTVREVALLRRLEAFEHPNV 68
Query: 134 VRYL---GTVREEESLNILLEFVP-GGSISSLLGKFGP--FPEAVMRTYTKQLLLGLEYL 187
VR + T R + + + L F + + L K P P ++ +Q L GL++L
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H + I+HRD+K NILV + G +KLADFG ++ + + + T ++ APEV+ Q
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALD---PVVVTLWYRAPEVLLQ 185
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPW--SQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ ++ D+WSVGC EM KP + + + ++ +F + P ++S+
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 245
Query: 306 F----------------------LLKCLEKEPDLRPTASELLKHPFVTGDDEDP 337
F LL+ L P R +A L+H ++ D+ +P
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 6/202 (2%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
++IG G+FG+V + + AVK ++ K+K + HI HP
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVK--VLQKKAILKKKEEKHIMSERNVLLKNV--KHP 99
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
+V + + + L +L+++ GG + L + F E R Y ++ L YLH+
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHS 251
I++RD+K NIL+D++G I L DFG K+ E + + + GTP ++APEV+ + +
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTS--TFCGTPEYLAPEVLHKQPYD 217
Query: 252 YSADIWSVGCTVIEMATGKPPW 273
+ D W +G + EM G PP+
Sbjct: 218 RTVDWWCLGAVLYEMLYGLPPF 239
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNIVR ++ EE ++ + V GG + + + EA Q+L + ++H
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 190 HGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H I+HRD+K N+L+ +K +KLADFG + +V GTP +++PEV+R
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ--GEQQAWFGFAGTPGYLSPEVLR 206
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ + DIW+ G + + G PP W + ++ G P + ++ +AK+
Sbjct: 207 KDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKN 266
Query: 306 FLLKCLEKEPDLRPTASELLKHPFV 330
+ + L P R TA + LKHP+V
Sbjct: 267 LINQMLTINPAKRITADQALKHPWV 291
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 39/293 (13%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
++ K IG G++G V+ N D+G+++A+K+ L + + +K
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKI------ALREIRMLK 57
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
HPN+V L R + L+++ E+ + L PE ++++ T Q L + +
Sbjct: 58 QLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNF 117
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPE-VI 245
H H +HRD+K NIL+ IKL DFG ++ + + + T ++ +PE ++
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV--ATRWYRSPELLV 175
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKS-------------- 291
T + D+W++GC E+ +G P W + +V L+ I T
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSGVPLWPGK-SDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234
Query: 292 -----HPPIPE----------NLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
P PE N+S A L CL +P R T +LL HP+
Sbjct: 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 131/281 (46%), Gaps = 21/281 (7%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQV-LIAANFASKEKAQDHIXXXXXXXXXXX 126
+R + IG G F +V + ++ +G+ +AV+ + N +S +K +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL----- 70
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
+HPNIV+ + E++L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 71 --NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H I+HRD+K N+L+D IK+ADFG S E + G+P + APE+ +
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDEFCGSPPYAAPELFQ 185
Query: 247 QTGHSY---SADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
G Y D+WS+G + + +G P+ Q +E+ G + IP +S
Sbjct: 186 --GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTD 239
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASV 343
++ L K L P R T +++K ++ ED L V
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYV 280
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 12/264 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G GAF V + + +G+ A + K A+DH HP
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMII-----NTKKLSARDH-QKLEREARICRLLKHP 70
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
NIVR ++ EE ++ + V GG + + + EA +Q+L + + H G
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 192 IMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
++HR++K N+L+ +K +KLADFG + +V GTP +++PEV+R+
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE--GEQQAWFGFAGTPGYLSPEVLRKD 188
Query: 249 GHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+ D+W+ G + + G PP W + + G P + ++ +AKD +
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI 248
Query: 308 LKCLEKEPDLRPTASELLKHPFVT 331
K L P R TA+E LKHP+++
Sbjct: 249 NKMLTINPSKRITAAEALKHPWIS 272
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 120/263 (45%), Gaps = 12/263 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E IG GAF V + L +G A K + K A+DH H
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKII-----NTKKLSARDH-QKLEREARICRLLKHS 63
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
NIVR ++ EE ++ + V GG + + + EA +Q+L + + H G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 123
Query: 192 IMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
++HRD+K N+L+ +K +KLADFG + +V GTP +++PEV+R+
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ--GDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 249 GHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+ DIW+ G + + G PP W + ++ G P + ++ +AK+ +
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 241
Query: 308 LKCLEKEPDLRPTASELLKHPFV 330
+ L P R TA E LKHP+V
Sbjct: 242 NQMLTINPAKRITAHEALKHPWV 264
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 120/264 (45%), Gaps = 27/264 (10%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G++G V+ + + G L AVK+ + + +D HP
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKR-----SMSPFRGPKDRARKLAEVGSHEKVGQHPCC 119
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEYLHNHGI 192
VR L EE + L + G S+ +G PEA + Y + LL L +LH+ G+
Sbjct: 120 VR-LEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGL 178
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSY 252
+H D+K ANI + +G KL DFG + EL T + +G P +MAPE++ Q +
Sbjct: 179 VHLDVKPANIFLGPRGRCKLGDFGL---LVELGTAGAGEVQEGDPRYMAPELL-QGSYGT 234
Query: 253 SADIWSVGCTVIEMAT------GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+AD++S+G T++E+A G W Q Q P LS + +
Sbjct: 235 AADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLP----------PEFTAGLSSELRSV 284
Query: 307 LLKCLEKEPDLRPTASELLKHPFV 330
L+ LE +P LR TA LL P +
Sbjct: 285 LVMMLEPDPKLRATAEALLALPVL 308
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 16/266 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ +G G FG+V +G + +G +AVK + K ++ D + H
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKIL-----NRQKIRSLDVVGKIRREIQNLKLFRH 75
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
P+I++ + + +++E+V GG + + K G E R +Q+L G++Y H H
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGH 250
++HRD+K N+L+D K+ADFG S +++ + + G+P + APEVI +G
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVI--SGR 190
Query: 251 SYS---ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
Y+ DIWS G + + G P+ + V LF P+ L+ L
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDH--VPTLFK-KICDGIFYTPQYLNPSVISLL 247
Query: 308 LKCLEKEPDLRPTASELLKHPFVTGD 333
L+ +P R T ++ +H + D
Sbjct: 248 KHMLQVDPMKRATIKDIREHEWFKQD 273
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 21/281 (7%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQV-LIAANFASKEKAQDHIXXXXXXXXXXX 126
+R + IG G F +V + ++ +G+ +AVK + N +S +K +
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL----- 63
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
+HPNIV+ + E++L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 64 --NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY 121
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H I+HRD+K N+L+D IK+ADFG S E + + G+P + APE+ +
Sbjct: 122 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFCGSPPYAAPELFQ 178
Query: 247 QTGHSY---SADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
G Y D+WS+G + + +G P+ Q +E+ G + IP +S
Sbjct: 179 --GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTD 232
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASV 343
++ L K L P R T +++K ++ ED L V
Sbjct: 233 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYV 273
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 36/277 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFAS--------KEKAQDHIXXX 118
R+ GE++G G V++ +L +AVK ++ A+ A + +AQ+
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVK--VLRADLARDPSFYLRFRREAQN----- 82
Query: 119 XXXXXXXXXXSHPNIVRYLGTVREEESLN----ILLEFVPGGSISSLLGKFGPFPEAVMR 174
+HP IV T E I++E+V G ++ ++ GP
Sbjct: 83 ------AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 136
Query: 175 TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA-TVSGAKSM 233
L + H +GI+HRD+K ANI++ +K+ DFG ++ +A+ +V+ ++
Sbjct: 137 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 196
Query: 234 KGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHP 293
GT +++PE R +D++S+GC + E+ TG+PP++ A H+
Sbjct: 197 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV----RED 252
Query: 294 PIP-----ENLSVKAKDFLLKCLEKEPDLR-PTASEL 324
PIP E LS +LK L K P+ R TA+E+
Sbjct: 253 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 289
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 118/272 (43%), Gaps = 28/272 (10%)
Query: 74 IGCGAFGRV----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG+V Y N +GE++AVK + + H
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-------KADAGPQHRSGWKQEIDILRTLY 91
Query: 130 HPNIVRYLGTVREE--ESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
H +I++Y G + SL +++E+VP GS+ L + A + + +Q+ G+ YL
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYL 150
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVIR 246
H +HRD+ N+L+DN +K+ DFG +K V E + +P +W APE ++
Sbjct: 151 HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 247 QTGHSYSADIWSVGCTVIEMATG-----KPP--------WSQQYQEVAALFHIGTTKSHP 293
+ Y++D+WS G T+ E+ T PP +Q V L +
Sbjct: 211 EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL 270
Query: 294 PIPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P P+ + + C E E RPT L+
Sbjct: 271 PRPDKCPAEVYHLMKNCWETEASFRPTFENLI 302
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 11/195 (5%)
Query: 143 EESLNILLEFVPGGSISSLLGKFGP--FPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGA 200
+++L ++L + GG + + G FPEA Y ++ GLE LH I++RD+K
Sbjct: 256 KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPE 315
Query: 201 NILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVG 260
NIL+D+ G I+++D G + V E T+ G GT +MAPEV++ +++S D W++G
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEGQTIKGR---VGTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 261 CTVIEMATGKPPWSQQYQEVAALFHIGTTKSHP-PIPENLSVKAKDFLLKCLEKEPDLR- 318
C + EM G+ P+ Q+ +++ K P E S +A+ + L K+P R
Sbjct: 373 CLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERL 432
Query: 319 ----PTASELLKHPF 329
+A E+ +HP
Sbjct: 433 GCRGGSAREVKEHPL 447
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 8/202 (3%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
++G G+FG+V + + EL A+K ++ + ++ D + P
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIK--ILKKDVVIQD---DDVECTMVEKRVLALLDKPP 80
Query: 133 IVRYLGTVREE-ESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
+ L + + + L ++E+V GG + + + G F E Y ++ +GL +LH G
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG 140
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHS 251
I++RD+K N+++D++G IK+ADFG K+ + + GTP ++APE+I +
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKE--HMMDGVTTREFCGTPDYIAPEIIAYQPYG 198
Query: 252 YSADIWSVGCTVIEMATGKPPW 273
S D W+ G + EM G+PP+
Sbjct: 199 KSVDWWAYGVLLYEMLAGQPPF 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 13/208 (6%)
Query: 141 REEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKG 199
++E L +++E+ GG + +LL KFG P + R Y ++++ ++ +H G +HRDIK
Sbjct: 131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKP 190
Query: 200 ANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSY------- 252
NIL+D G I+LADFG+ ++ TV ++ GTP +++PE+++ G
Sbjct: 191 DNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTPDYLSPEILQAVGGGPGTGSYGP 249
Query: 253 SADIWSVGCTVIEMATGKPPW--SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL--L 308
D W++G EM G+ P+ + + H S P + E + +A+DF+ L
Sbjct: 250 ECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRL 309
Query: 309 KCLEKEPDLRPTASELLKHPFVTGDDED 336
C + R A + HPF G D D
Sbjct: 310 LCPPETRLGRGGAGDFRTHPFFFGLDWD 337
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 21/279 (7%)
Query: 70 KGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
K E++G G FG+V+ +G LA K ++ KE+ ++ I
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAK-IIKTRGMKDKEEVKNEISVMNQL-------D 144
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSI-SSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
H N+++ + + +++E+V GG + ++ + E + KQ+ G+ ++H
Sbjct: 145 HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH 204
Query: 189 NHGIMHRDIKGANILVDNKGC--IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
I+H D+K NIL N+ IK+ DFG +++ + K GTP ++APEV+
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL---KVNFGTPEFLAPEVVN 261
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE--NLSVKAK 304
S+ D+WSVG + +G P+ + L +I + E ++S +AK
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSGLSPFLGD-NDAETLNNILACRWDLEDEEFQDISEEAK 320
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASV 343
+F+ K L KE R +ASE LKHP+++ D LH+ +
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWLS----DHKLHSRL 355
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 113/255 (44%), Gaps = 17/255 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G+FG V+ + +G AVK+V + F +E S P I
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-FRVEE------------LVACAGLSSPRI 112
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
V G VRE +NI +E + GGS+ L+ + G PE Y Q L GLEYLH I+
Sbjct: 113 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRIL 172
Query: 194 HRDIKGANILVDNKGC-IKLADFGASKQV---AELATVSGAKSMKGTPYWMAPEVIRQTG 249
H D+K N+L+ + G L DFG + + ++ + GT MAPEV+
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 250 HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLK 309
DIWS C ++ M G PW+Q ++ L IP + + + +
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQE 292
Query: 310 CLEKEPDLRPTASEL 324
L KEP R +A EL
Sbjct: 293 GLRKEPVHRASAMEL 307
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQV----LIAANFASKEKAQDHIXXXXXXX 122
R+ + IG G FG + + S EL+AVK + IAAN K + +H
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANV--KREIINH-------- 69
Query: 123 XXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL 182
HPNIVR+ + L I++E+ GG + + G F E R + +QL+
Sbjct: 70 ---RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGC--IKLADFGASKQVAELATVSGAKSMKGTPYWM 240
G+ Y H + HRD+K N L+D +K+ DFG SK S KS GTP ++
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS---VLHSQPKSTVGTPAYI 183
Query: 241 APEVIRQTGHS-YSADIWSVGCTVIEMATGKPPW 273
APEV+ + + AD+WS G T+ M G P+
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 11/195 (5%)
Query: 143 EESLNILLEFVPGGSISSLLGKFGP--FPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGA 200
+++L ++L + GG + + G FPEA Y ++ GLE LH I++RD+K
Sbjct: 256 KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPE 315
Query: 201 NILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVG 260
NIL+D+ G I+++D G + V E T+ G GT +MAPEV++ +++S D W++G
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEGQTIKGR---VGTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 261 CTVIEMATGKPPWSQQYQEVAALFHIGTTKSHP-PIPENLSVKAKDFLLKCLEKEPDLR- 318
C + EM G+ P+ Q+ +++ K P E S +A+ + L K+P R
Sbjct: 373 CLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERL 432
Query: 319 ----PTASELLKHPF 329
+A E+ +HP
Sbjct: 433 GCRGGSAREVKEHPL 447
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G FG V+ G + ++A+K +++ + E + +HPNI
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK-FQEFQREVFIMSNLNHPNI 85
Query: 134 VRYLGTVREEESLNILLEFVPGGSI-SSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG- 191
V+ G + + ++EFVP G + LL K P +V + LG+EY+ N
Sbjct: 86 VKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 192 -IMHRDIKGANILVDNKG-----CIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I+HRD++ NI + + C K+ADFG S+Q +V + G WMAPE I
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ-----SVHSVSGLLGNFQWMAPETI 198
Query: 246 RQTGHSYS--ADIWSVGCTVIEMATGKPPWSQQ-YQEVAALFHIGTTKSHPPIPENLSVK 302
SY+ AD +S + + TG+ P+ + Y ++ + I P IPE+ +
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR 258
Query: 303 AKDFLLKCLEKEPDLRPTASELLK 326
++ + C +P RP S ++K
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 19/212 (8%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R+ + IG G FG + + + EL+AVK + E+ +
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYI---------ERGEKIDENVKREIINHR 70
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
HPNIVR+ + L I++E+ GG + + G F E R + +QL+ G+ Y
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 187 LHNHGIMHRDIKGANILVDNKGC--IKLADFGASKQVAELATV--SGAKSMKGTPYWMAP 242
H + HRD+K N L+D +K+ADFG SK A+V S KS GTP ++AP
Sbjct: 131 AHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK-----ASVLHSQPKSAVGTPAYIAP 185
Query: 243 EVIRQTGHS-YSADIWSVGCTVIEMATGKPPW 273
EV+ + + AD+WS G T+ M G P+
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 113/255 (44%), Gaps = 17/255 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G+FG V+ + +G AVK+V + F +E S P I
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-FRVEE------------LVACAGLSSPRI 128
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
V G VRE +NI +E + GGS+ L+ + G PE Y Q L GLEYLH I+
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRIL 188
Query: 194 HRDIKGANILVDNKGC-IKLADFGASKQV---AELATVSGAKSMKGTPYWMAPEVIRQTG 249
H D+K N+L+ + G L DFG + + ++ + GT MAPEV+
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 250 HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLK 309
DIWS C ++ M G PW+Q ++ L IP + + + +
Sbjct: 249 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQE 308
Query: 310 CLEKEPDLRPTASEL 324
L KEP R +A EL
Sbjct: 309 GLRKEPVHRASAMEL 323
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 108/238 (45%), Gaps = 18/238 (7%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
H N++ + ++LE V GG + L + E ++ KQ+L G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 190 HGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIV 190
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
AD+WS+G + +G P+ QE A + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
DF+ K L KE R T E L+HP++T PV + M E V NLE+ +
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWIT-----PVDNQQAMVRRE-----SVVNLENFR 298
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 108/238 (45%), Gaps = 18/238 (7%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
H N++ + ++LE V GG + L + E ++ KQ+L G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 190 HGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIV 190
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
AD+WS+G + +G P+ QE A + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
DF+ K L KE R T E L+HP++T PV + M E V NLE+ +
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWIT-----PVDNQQAMVRRE-----SVVNLENFR 298
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 113/255 (44%), Gaps = 17/255 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G+FG V+ + +G AVK+V + F +E S P I
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-FRVEE------------LVACAGLSSPRI 126
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
V G VRE +NI +E + GGS+ L+ + G PE Y Q L GLEYLH I+
Sbjct: 127 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRIL 186
Query: 194 HRDIKGANILVDNKGC-IKLADFGASKQV---AELATVSGAKSMKGTPYWMAPEVIRQTG 249
H D+K N+L+ + G L DFG + + ++ + GT MAPEV+
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 250 HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLK 309
DIWS C ++ M G PW+Q ++ L IP + + + +
Sbjct: 247 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQE 306
Query: 310 CLEKEPDLRPTASEL 324
L KEP R +A EL
Sbjct: 307 GLRKEPVHRASAMEL 321
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 72
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++EF+P GS+ L K + + + YT Q+ G+EY
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G FG V+ G + ++A+K +++ + E + +HPNI
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK-FQEFQREVFIMSNLNHPNI 85
Query: 134 VRYLGTVREEESLNILLEFVPGGSI-SSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG- 191
V+ G + + ++EFVP G + LL K P +V + LG+EY+ N
Sbjct: 86 VKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 192 -IMHRDIKGANILVDNKG-----CIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I+HRD++ NI + + C K+ADFG S+Q +V + G WMAPE I
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-----SVHSVSGLLGNFQWMAPETI 198
Query: 246 RQTGHSYS--ADIWSVGCTVIEMATGKPPWSQQ-YQEVAALFHIGTTKSHPPIPENLSVK 302
SY+ AD +S + + TG+ P+ + Y ++ + I P IPE+ +
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR 258
Query: 303 AKDFLLKCLEKEPDLRPTASELLK 326
++ + C +P RP S ++K
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G GA+G V ++ SG++ AVK++ N +Q+ P
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVN------SQEQKRLLXDLDISXRTVDCPFT 95
Query: 134 VRYLGTVREEESLNILLEFVPGG---SISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
V + G + E + I E ++ K PE ++ ++ LE+LH+
Sbjct: 96 VTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 155
Query: 191 -GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPEVIR-- 246
++HRD+K +N+L++ G +K DFG S + + AK + G + APE I
Sbjct: 156 LSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD----DVAKDIDAGCKPYXAPERINPE 211
Query: 247 --QTGHSYSADIWSVGCTVIEMATGKPP---WSQQYQEVAALFHIGTTKSHPPIP-ENLS 300
Q G+S +DIWS+G T IE+A + P W +Q++ + + P +P + S
Sbjct: 212 LNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV----VEEPSPQLPADKFS 267
Query: 301 VKAKDFLLKCLEKEPDLRPTASELLKHPFVT 331
+ DF +CL+K RPT EL +HPF T
Sbjct: 268 AEFVDFTSQCLKKNSKERPTYPELXQHPFFT 298
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
H N++ + ++LE V GG + L + E ++ KQ+L G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 190 HGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIV 190
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
DF+ K L KE R T E L+HP++T PV + M E V NLE+ +
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWIT-----PVDNQQAMVRRE-----SVVNLENFR 298
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
H N++ + ++LE V GG + L + E ++ KQ+L G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 190 HGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIV 190
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
DF+ K L KE R T E L+HP++T PV + M E V NLE+ +
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWIT-----PVDNQQAMVRRE-----SVVNLENFR 298
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 8/215 (3%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPN++ + + ++LE V GG + L + E + KQ+L G+ YLH+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 190 HGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPAFVAPEIV 189
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
AD+WS+G + +G P+ QE A + N S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVL 339
DF+ + L K+P R T + L+HP++ D L
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 120/268 (44%), Gaps = 22/268 (8%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G +G G FG VY+ S ++A+K VL + KE + + H
Sbjct: 28 GRPLGKGKFGNVYLAREKKSHFIVALK-VLFKSQI-EKEGVEHQLRREIEIQAHL---HH 82
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
PNI+R + + ++LE+ P G + L K F E T ++L L Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGH 250
++HRDIK N+L+ KG +K+ADFG S L K+M GT ++ PE+I H
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR----KTMCGTLDYLPPEMIEGRMH 198
Query: 251 SYSADIWSVGCTVIEMATGKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ D+W +G E+ G PP+ ++ Y+ + K P ++ A+D
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRI--------VKVDLKFPASVPTGAQD 250
Query: 306 FLLKCLEKEPDLRPTASELLKHPFVTGD 333
+ K L P R +++ HP+V +
Sbjct: 251 LISKLLRHNPSERLPLAQVSAHPWVRAN 278
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 8/215 (3%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPN++ + + ++LE V GG + L + E + KQ+L G+ YLH+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 190 HGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIV 189
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
AD+WS+G + +G P+ QE A + N S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVL 339
DF+ + L K+P R T + L+HP++ D L
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 8/207 (3%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
H N++ + ++LE V GG + L + E ++ KQ+L G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 190 HGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIV 190
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFVT 331
DF+ K L KE R T E L+HP++T
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 68
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 128
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 129 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 72
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 73
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 133
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 134 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 74
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 134
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 135 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT 217
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 133/294 (45%), Gaps = 37/294 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHI-XXXXXXXXXX 125
R+ K + +G G F VY + ++ +++A+K++ + +A+D I
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKI----KLGHRSEAKDGINRTALREIKLL 66
Query: 126 XXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
SHPNI+ L + +++++ +F+ + + ++ Y L GLE
Sbjct: 67 QELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
YLH H I+HRD+K N+L+D G +KLADFG +K + + T ++ APE++
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELL 184
Query: 246 ---RQTGHSYSADIWSVGCTVIEMATGKP--------------------PWSQQYQEVAA 282
R G D+W+VGC + E+ P P +Q+ ++ +
Sbjct: 185 FGARMYG--VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS 242
Query: 283 LFHIGTTKSHPPIP-ENLSVKAKDFLLKCLEK----EPDLRPTASELLKHPFVT 331
L T KS P IP ++ A D LL ++ P R TA++ LK + +
Sbjct: 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 17/262 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ IG G+FG VY G G++ AVK + + A + +A H
Sbjct: 41 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQA------FKNEVGVLRKTRH 91
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
NI+ ++G + + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 92 VNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
I+HRD+K NI + +K+ DFG + + + + + + G+ WMAPEVIR
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 250 ---HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE---NLSVKA 303
+S+ +D+++ G + E+ TG+ P+S +F +G P + + N
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 270
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
K + +CL+K+ D RP ++L
Sbjct: 271 KRLMAECLKKKRDERPLFPQIL 292
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 69
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 75
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 135
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 136 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 196 TESKFSVASDVWSFGVVLYELFT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 67
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 127
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 128 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 100
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 160
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 161 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 76
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 136
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 137 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 69
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 26/254 (10%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----AVMRTYTKQLLLGLE 185
HPNI+ + + + ++ E + GG + + + F E AV+ T TK + E
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTV----E 130
Query: 186 YLHNHGIMHRDIKGANIL-VDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPYW-- 239
YLH G++HRD+K +NIL VD G I++ DFG +KQ+ + TP +
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL------RAENGLLMTPCYTA 184
Query: 240 --MAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQ----QYQEVAALFHIGTTKSHP 293
+APEV+ + G+ + DIWS+G + M TG P++ +E+ A G
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSG 244
Query: 294 PIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASVMKSSEILSPS 353
++S AKD + K L +P R TA+ +L+HP++ D+ P + + ++ +
Sbjct: 245 GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGA 304
Query: 354 HVANLESLQMLTSP 367
A +L SP
Sbjct: 305 MAATYSALNRNQSP 318
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 8/216 (3%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
HPN++ + + ++LE V GG + L + E + KQ+L G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 189 NHGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEI 188
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ AD+WS+G + +G P+ QE A + N S A
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVL 339
KDF+ + L K+P R T + L+HP++ D L
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R+ + IG G FG + + S EL+AVK + E+ +
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---------ERGEKIDENVKREIINHR 69
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
HPNIVR+ + L I++E+ GG + + G F E R + +QL+ G+ Y
Sbjct: 70 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 129
Query: 187 LHNHGIMHRDIKGANILVDNKGC--IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
H + HRD+K N L+D +K+ DFG SK S KS GTP ++APEV
Sbjct: 130 CHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS---VLHSQPKSTVGTPAYIAPEV 186
Query: 245 IRQTGHS-YSADIWSVGCTVIEMATGKPPW 273
+ + + AD+WS G T+ M G P+
Sbjct: 187 LLKKEYDGKVADVWSCGVTLYVMLVGAYPF 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 8/216 (3%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
HPN++ + + ++LE V GG + L + E + KQ+L G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 189 NHGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEI 188
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ AD+WS+G + +G P+ QE A + N S A
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVL 339
KDF+ + L K+P R T + L+HP++ D L
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 69
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
HPN++ + + ++LE V GG + L + E + KQ+L G+ YLH
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 189 NHGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE+
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEI 187
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ AD+WS+G + +G P+ QE A + N S A
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHAS 342
KDF+ + L K+P R T + L+HP++ D L ++
Sbjct: 248 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 286
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
HPN++ + + ++LE V GG + L + E + KQ+L G+ YLH
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 189 NHGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE+
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEI 187
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ AD+WS+G + +G P+ QE A + N S A
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHAS 342
KDF+ + L K+P R T + L+HP++ D L ++
Sbjct: 248 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 286
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 17/262 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ IG G+FG VY G G++ AVK + + A + +A H
Sbjct: 33 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQA------FKNEVGVLRKTRH 83
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
NI+ ++G + + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 84 VNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
I+HRD+K NI + +K+ DFG + + + + + + G+ WMAPEVIR
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 250 ---HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE---NLSVKA 303
+S+ +D+++ G + E+ TG+ P+S +F +G P + + N
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 262
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
K + +CL+K+ D RP ++L
Sbjct: 263 KRLMAECLKKKRDERPLFPQIL 284
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
HPN++ + + ++LE V GG + L + E + KQ+L G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 189 NHGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEI 188
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ AD+WS+G + +G P+ QE A + N S A
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHAS 342
KDF+ + L K+P R T + L+HP++ D L ++
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 287
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
HPN++ + + ++LE V GG + L + E + KQ+L G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 189 NHGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEI 188
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ AD+WS+G + +G P+ QE A + N S A
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHAS 342
KDF+ + L K+P R T + L+HP++ D L ++
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 287
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 8/216 (3%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
HPN++ + + ++LE V GG + L + E + KQ+L G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 189 NHGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEI 188
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ AD+WS+G + +G P+ QE A + N S A
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVL 339
KDF+ + L K+P R T + L+HP++ D L
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
HPN++ + + ++LE V GG + L + E + KQ+L G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 189 NHGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEI 188
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ AD+WS+G + +G P+ QE A + N S A
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHAS 342
KDF+ + L K+P R T + L+HP++ D L ++
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 287
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 8/216 (3%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
HPN++ + + ++LE V GG + L + E + KQ+L G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 189 NHGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEI 188
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ AD+WS+G + +G P+ QE A + N S A
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVL 339
KDF+ + L K+P R T + L+HP++ D L
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI++ T ++ + + G + L + E R + LL + LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR--- 246
I+HRD+K NIL+D+ IKL DFG S Q L +S+ GTP ++APE+I
Sbjct: 143 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ---LDPGEKLRSVCGTPSYLAPEIIECSM 199
Query: 247 ---QTGHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
G+ D+WS G + + G PP W ++ + + G + P ++ S
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 259
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPF 329
KD + + L +P R TA E L HPF
Sbjct: 260 VKDLVSRFLVVQPQKRYTAEEALAHPF 286
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 111/224 (49%), Gaps = 26/224 (11%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSI--SSLLGKFGPFPEA--VMRTYTKQLLLGLE 185
HPNI+ + + + ++ E + GG + L KF EA V+ T K + E
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTV----E 135
Query: 186 YLHNHGIMHRDIKGANIL-VDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPYW-- 239
YLH+ G++HRD+K +NIL VD G C+++ DFG +KQ+ + TP +
Sbjct: 136 YLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL------RAENGLLMTPCYTA 189
Query: 240 --MAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPW----SQQYQEVAALFHIGTTKSHP 293
+APEV+++ G+ DIWS+G + M G P+ S +E+ G
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSG 249
Query: 294 PIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+S AKD + K L +P R TA ++L+HP+VT D+ P
Sbjct: 250 GNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLP 293
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 111/224 (49%), Gaps = 26/224 (11%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSI--SSLLGKFGPFPEA--VMRTYTKQLLLGLE 185
HPNI+ + + + ++ E + GG + L KF EA V+ T K + E
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTV----E 135
Query: 186 YLHNHGIMHRDIKGANIL-VDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPYW-- 239
YLH+ G++HRD+K +NIL VD G C+++ DFG +KQ+ + TP +
Sbjct: 136 YLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL------RAENGLLMTPCYTA 189
Query: 240 --MAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPW----SQQYQEVAALFHIGTTKSHP 293
+APEV+++ G+ DIWS+G + M G P+ S +E+ G
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSG 249
Query: 294 PIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDP 337
+S AKD + K L +P R TA ++L+HP+VT D+ P
Sbjct: 250 GNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLP 293
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 128/281 (45%), Gaps = 21/281 (7%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQV-LIAANFASKEKAQDHIXXXXXXXXXXX 126
+R + IG G F +V + ++ +G+ +AVK + N +S +K +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVL----- 70
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
+HPNIV+ + E++L ++ E+ GG + L G E R +Q++ ++Y
Sbjct: 71 --NHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQY 128
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H I+HRD+K N+L+D IK+ADFG S E + + G P + APE+ +
Sbjct: 129 CHQKFIVHRDLKAENLLLDADXNIKIADFGFSN---EFTFGNKLDAFCGAPPYAAPELFQ 185
Query: 247 QTGHSY---SADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
G Y D+WS+G + + +G P+ Q +E+ G + IP S
Sbjct: 186 --GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYXSTD 239
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASV 343
++ L K L P R T ++ K + ED L V
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIXKDRWXNVGHEDDELKPYV 280
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 87
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 87
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQ---DHIXXXXXXXXX 124
+R + IG G F +V + ++ +G +AVK + +K Q +
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKII---------DKTQLNPTSLQKLFREVRI 67
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGL 184
+HPNIV+ + E++L +++E+ GG + L G E R +Q++ +
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 127
Query: 185 EYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+Y H I+HRD+K N+L+D IK+ADFG S E + + G+P + APE+
Sbjct: 128 QYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSN---EFTVGNKLDTFCGSPPYAAPEL 184
Query: 245 IRQTGHSY---SADIWSVGCTVIEMATGKPPWSQQ 276
+ G Y D+WS+G + + +G P+ Q
Sbjct: 185 FQ--GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 17/262 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ IG G+FG VY G G++ AVK + + A + +A H
Sbjct: 29 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQA------FKNEVGVLRKTRH 79
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSI-SSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
NI+ ++G + + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 80 VNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
I+HRD+K NI + +K+ DFG + + + + + + G+ WMAPEVIR
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 250 ---HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE---NLSVKA 303
+S+ +D+++ G + E+ TG+ P+S + +G P + + N +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
K + +CL+K+ D RP+ +L
Sbjct: 259 KRLMAECLKKKRDERPSFPRIL 280
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 19/264 (7%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G FG V+ G + ++A+K +++ + E + +HPNI
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK-FQEFQREVFIMSNLNHPNI 85
Query: 134 VRYLGTVREEESLNILLEFVPGGSI-SSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG- 191
V+ G + + ++EFVP G + LL K P +V + LG+EY+ N
Sbjct: 86 VKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 192 -IMHRDIKGANILVDNKG-----CIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I+HRD++ NI + + C K+ADF S+Q +V + G WMAPE I
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ-----SVHSVSGLLGNFQWMAPETI 198
Query: 246 RQTGHSYS--ADIWSVGCTVIEMATGKPPWSQQ-YQEVAALFHIGTTKSHPPIPENLSVK 302
SY+ AD +S + + TG+ P+ + Y ++ + I P IPE+ +
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR 258
Query: 303 AKDFLLKCLEKEPDLRPTASELLK 326
++ + C +P RP S ++K
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 17/262 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ IG G+FG VY G G++ AVK + + A + +A H
Sbjct: 40 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQA------FKNEVGVLRKTRH 90
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
NI+ ++G + + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 91 VNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVIR
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 250 ---HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE---NLSVKA 303
+S+ +D+++ G + E+ TG+ P+S +F +G P + + N
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 269
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
K + +CL+K+ D RP ++L
Sbjct: 270 KRLMAECLKKKRDERPLFPQIL 291
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 8/206 (3%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+ + + ++LE V GG + L + E + KQ+L G+ YLH+
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 190 HGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---EAGNEFKNIFGTPEFVAPEIV 183
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
AD+WS+G + +G P+ + QE N S AK
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 243
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFV 330
DF+ + L K+P R T ++ L+H ++
Sbjct: 244 DFIRRLLVKDPKRRMTIAQSLEHSWI 269
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 8/207 (3%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
HPN++ + + ++LE V GG + L + E + KQ+L G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 189 NHGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEI 188
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ AD+WS+G + +G P+ QE A + N S A
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
KDF+ + L K+P R T + L+HP++
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 17/262 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ IG G+FG VY G G++ AVK + + A + +A H
Sbjct: 13 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQA------FKNEVGVLRKTRH 63
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
NI+ ++G + + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 64 VNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
I+HRD+K NI + +K+ DFG + + + + + + G+ WMAPEVIR
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 250 ---HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE---NLSVKA 303
+S+ +D+++ G + E+ TG+ P+S +F +G P + + N
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
K + +CL+K+ D RP ++L
Sbjct: 243 KRLMAECLKKKRDERPLFPQIL 264
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 8/207 (3%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
HPN++ + + ++LE V GG + L + E + KQ+L G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 189 NHGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEI 188
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ AD+WS+G + +G P+ QE A + N S A
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
KDF+ + L K+P R T + L+HP++
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 26/289 (8%)
Query: 55 HISPS--VKMSPPI---RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE 109
H +P V+ S I R++ ++G G+FG V + + +G+ AVK + + K+
Sbjct: 33 HATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVK---VISKRQVKQ 89
Query: 110 KAQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFP 169
K HPNI++ ++ ++ E GG + + F
Sbjct: 90 KTDKE--SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 147
Query: 170 EAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELAT 226
E +Q+L G+ Y+H + I+HRD+K N+L+++K I++ DFG S
Sbjct: 148 EVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH------ 201
Query: 227 VSGAKSMK---GTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPW--SQQYQEVA 281
+K MK GT Y++APEV+ T + D+WS G + + +G PP+ + +Y ++
Sbjct: 202 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEY-DIL 259
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
G P + +S AKD + K L P +R +A + L H ++
Sbjct: 260 KKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI 308
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 20/172 (11%)
Query: 174 RTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSM 233
++Y K +L + +H HGI+H D+K AN L+ + G +KL DFG + Q+ T S
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 234 KGTPYWMAPEVIRQTGHS-----------YSADIWSVGCTVIEMATGKPPWSQQYQEVAA 282
GT +M PE I+ S +D+WS+GC + M GK P+ Q +++
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 276
Query: 283 LFHIGTTKSH----PPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
L H +H P IPE +D L CL+++P R + ELL HP+V
Sbjct: 277 L-HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 26/289 (8%)
Query: 55 HISPS--VKMSPPI---RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE 109
H +P V+ S I R++ ++G G+FG V + + +G+ AVK + + K+
Sbjct: 34 HATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVK---VISKRQVKQ 90
Query: 110 KAQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFP 169
K HPNI++ ++ ++ E GG + + F
Sbjct: 91 KTDKE--SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 148
Query: 170 EAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELAT 226
E +Q+L G+ Y+H + I+HRD+K N+L+++K I++ DFG S
Sbjct: 149 EVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH------ 202
Query: 227 VSGAKSMK---GTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPW--SQQYQEVA 281
+K MK GT Y++APEV+ T + D+WS G + + +G PP+ + +Y ++
Sbjct: 203 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEY-DIL 260
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
G P + +S AKD + K L P +R +A + L H ++
Sbjct: 261 KKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI 309
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 17/262 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ IG G+FG VY G G++ AVK + + A + +A H
Sbjct: 41 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQA------FKNEVGVLRKTRH 91
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
NI+ ++G + + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 92 VNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVIR
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 250 ---HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE---NLSVKA 303
+S+ +D+++ G + E+ TG+ P+S +F +G P + + N
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 270
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
K + +CL+K+ D RP ++L
Sbjct: 271 KRLMAECLKKKRDERPLFPQIL 292
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 144/334 (43%), Gaps = 88/334 (26%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE----KAQDHIXXXXXXX 122
++ G+ +G G+FG V +++SG+ A+K+VL + ++E K DH+
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNII---- 63
Query: 123 XXXXXXSHPNIVRYLGTVREEE-----------------------------------SLN 147
+V Y T +EE LN
Sbjct: 64 ---------KLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLN 114
Query: 148 ILLEFVPGGSISSLLGKF----GPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANIL 203
+++E+VP ++ +L F P ++ Y QL + ++H+ GI HRDIK N+L
Sbjct: 115 VIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL 173
Query: 204 VDNK-GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR-QTGHSYSADIWSVGC 261
V++K +KL DFG++K+ L + + + ++ APE++ T ++ S D+WS+GC
Sbjct: 174 VNSKDNTLKLCDFGSAKK---LIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGC 230
Query: 262 TVIEMATGKPPWSQQY---QEVAALFHIGT-------------TKSHPP----------I 295
E+ GKP +S + Q V + +GT T+ P +
Sbjct: 231 VFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKIL 290
Query: 296 PENLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
PE A D L + L EPDLR E + HPF
Sbjct: 291 PEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF 324
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 28/272 (10%)
Query: 74 IGCGAFGRV----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG+V Y N +GE++AVK + + Q I
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL-------Y 69
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
H +IV+Y G + E+S+ +++E+VP GS+ L + A + + +Q+ G+ YL
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYL 128
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVIR 246
H +HR + N+L+DN +K+ DFG +K V E + +P +W APE ++
Sbjct: 129 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 247 QTGHSYSADIWSVGCTVIEMAT----GKPP---------WSQQYQEVAALFHIGTTKSHP 293
+ Y++D+WS G T+ E+ T + P +Q V L +
Sbjct: 189 ECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERL 248
Query: 294 PIPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P P+ + + C E E RPT L+
Sbjct: 249 PRPDRCPCEIYHLMKNCWETEASFRPTFQNLV 280
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 26/289 (8%)
Query: 55 HISPS--VKMSPPI---RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE 109
H +P V+ S I R++ ++G G+FG V + + +G+ AVK + + K+
Sbjct: 10 HATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVK---VISKRQVKQ 66
Query: 110 KAQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFP 169
K HPNI++ ++ ++ E GG + + F
Sbjct: 67 KTDKE--SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 124
Query: 170 EAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELAT 226
E +Q+L G+ Y+H + I+HRD+K N+L+++K I++ DFG S
Sbjct: 125 EVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH------ 178
Query: 227 VSGAKSMK---GTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPW--SQQYQEVA 281
+K MK GT Y++APEV+ T + D+WS G + + +G PP+ + +Y ++
Sbjct: 179 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEY-DIL 236
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
G P + +S AKD + K L P +R +A + L H ++
Sbjct: 237 KKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI 285
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 72
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L + + + YT Q+ G+EY
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEY 132
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 28/272 (10%)
Query: 74 IGCGAFGRV----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG+V Y N +GE++AVK + + Q I
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL-------Y 68
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
H +IV+Y G + E+S+ +++E+VP GS+ L + A + + +Q+ G+ YL
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYL 127
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVIR 246
H +HR + N+L+DN +K+ DFG +K V E + +P +W APE ++
Sbjct: 128 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 247 QTGHSYSADIWSVGCTVIEMAT----GKPP---------WSQQYQEVAALFHIGTTKSHP 293
+ Y++D+WS G T+ E+ T + P +Q V L +
Sbjct: 188 ECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERL 247
Query: 294 PIPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P P+ + + C E E RPT L+
Sbjct: 248 PRPDRCPCEIYHLMKNCWETEASFRPTFQNLV 279
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 20/172 (11%)
Query: 174 RTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSM 233
++Y K +L + +H HGI+H D+K AN L+ + G +KL DFG + Q+ T S
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 234 KGTPYWMAPEVIRQTGHS-----------YSADIWSVGCTVIEMATGKPPWSQQYQEVAA 282
GT +M PE I+ S +D+WS+GC + M GK P+ Q +++
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 276
Query: 283 LFHIGTTKSH----PPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
L H +H P IPE +D L CL+++P R + ELL HP+V
Sbjct: 277 L-HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 10/207 (4%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI++ T ++ + + G + L + E R + LL + LH
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 129
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR--- 246
I+HRD+K NIL+D+ IKL DFG S Q L + + GTP ++APE+I
Sbjct: 130 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ---LDPGEKLREVCGTPSYLAPEIIECSM 186
Query: 247 ---QTGHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
G+ D+WS G + + G PP W ++ + + G + P ++ S
Sbjct: 187 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 246
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPF 329
KD + + L +P R TA E L HPF
Sbjct: 247 VKDLVSRFLVVQPQKRYTAEEALAHPF 273
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRVYMG----MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V M + ++GE++AVK++ + ++H+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 70
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 130
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L +HR++ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 131 LGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
++ S ++D+WS G + E+ T
Sbjct: 191 TESKFSVASDVWSFGVVLYELFT 213
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFV-PGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE + P + + + G E + R++ Q+L +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 184
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSSEC 235
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 10/207 (4%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI++ T ++ + + G + L + E R + LL + LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR--- 246
I+HRD+K NIL+D+ IKL DFG S Q L + + GTP ++APE+I
Sbjct: 143 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ---LDPGEKLREVCGTPSYLAPEIIECSM 199
Query: 247 ---QTGHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
G+ D+WS G + + G PP W ++ + + G + P ++ S
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 259
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPF 329
KD + + L +P R TA E L HPF
Sbjct: 260 VKDLVSRFLVVQPQKRYTAEEALAHPF 286
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 17/262 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ IG G+FG VY G G++ AVK + + A + +A H
Sbjct: 29 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQA------FKNEVGVLRKTRH 79
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSI-SSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
NI+ ++G + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 80 VNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
I+HRD+K NI + +K+ DFG + + + + + + G+ WMAPEVIR
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 250 ---HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE---NLSVKA 303
+S+ +D+++ G + E+ TG+ P+S + +G P + + N +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
K + +CL+K+ D RP+ +L
Sbjct: 259 KRLMAECLKKKRDERPSFPRIL 280
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 20/172 (11%)
Query: 174 RTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSM 233
++Y K +L + +H HGI+H D+K AN L+ + G +KL DFG + Q+ T S
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQ 188
Query: 234 KGTPYWMAPEVIRQTGHS-----------YSADIWSVGCTVIEMATGKPPWSQQYQEVAA 282
GT +M PE I+ S +D+WS+GC + M GK P+ Q +++
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 248
Query: 283 LFHIGTTKSH----PPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
L H +H P IPE +D L CL+++P R + ELL HP+V
Sbjct: 249 L-HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 17/262 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ IG G+FG VY G G++ AVK + + A + +A H
Sbjct: 18 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQA------FKNEVGVLRKTRH 68
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
NI+ ++G + + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 69 VNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVIR
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 250 ---HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE---NLSVKA 303
+S+ +D+++ G + E+ TG+ P+S +F +G P + + N
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 247
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
K + +CL+K+ D RP ++L
Sbjct: 248 KRLMAECLKKKRDERPLFPQIL 269
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 18/278 (6%)
Query: 58 PSVKMSPPI--RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHI 115
P +K P+ +++ G L+G G FG VY G+ + +A+K V E
Sbjct: 21 PHMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR 80
Query: 116 XXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMR 174
++R L +S ++LE P + + + G E + R
Sbjct: 81 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 140
Query: 175 TYTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSM 233
++ Q+L + + HN G++HRDIK NIL+D N+G +KL DFG+ + +
Sbjct: 141 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DF 196
Query: 234 KGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSH 292
GT + PE IR H SA +WS+G + +M G P+ + +
Sbjct: 197 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQ 247
Query: 293 PPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
+ +S + + + CL P RPT E+ HP++
Sbjct: 248 VFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 285
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 17/262 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ IG G+FG VY G G++ AVK + + A + +A H
Sbjct: 18 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQA------FKNEVGVLRKTRH 68
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
NI+ ++G + + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 69 VNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVIR
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 250 ---HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE---NLSVKA 303
+S+ +D+++ G + E+ TG+ P+S +F +G P + + N
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 247
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
K + +CL+K+ D RP ++L
Sbjct: 248 KRLMAECLKKKRDERPLFPQIL 269
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 20/172 (11%)
Query: 174 RTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSM 233
++Y K +L + +H HGI+H D+K AN L+ + G +KL DFG + Q+ T S
Sbjct: 114 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQ 172
Query: 234 KGTPYWMAPEVIRQTGHS-----------YSADIWSVGCTVIEMATGKPPWSQQYQEVAA 282
GT +M PE I+ S +D+WS+GC + M GK P+ Q +++
Sbjct: 173 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 232
Query: 283 LFHIGTTKSH----PPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
L H +H P IPE +D L CL+++P R + ELL HP+V
Sbjct: 233 L-HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYV 280
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 17/262 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ IG G+FG VY G G++ AVK + + A + +A H
Sbjct: 15 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQA------FKNEVGVLRKTRH 65
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
NI+ ++G + + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 66 VNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVIR
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 250 ---HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE---NLSVKA 303
+S+ +D+++ G + E+ TG+ P+S +F +G P + + N
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 244
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
K + +CL+K+ D RP ++L
Sbjct: 245 KRLMAECLKKKRDERPLFPQIL 266
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 18/171 (10%)
Query: 174 RTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSM 233
++Y K +L + +H HGI+H D+K AN L+ + G +KL DFG + Q+ T S
Sbjct: 111 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQ 169
Query: 234 KGTPYWMAPEVIRQTGHS-----------YSADIWSVGCTVIEMATGKPPWSQQYQEVAA 282
GT +M PE I+ S +D+WS+GC + M GK P+ Q +++
Sbjct: 170 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 229
Query: 283 LFHI---GTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
L I P IPE +D L CL+++P R + ELL HP+V
Sbjct: 230 LHAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYV 277
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 200
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSXEC 251
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 135/281 (48%), Gaps = 30/281 (10%)
Query: 54 KHISPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE--KA 111
+HI P + IR E +G G+FG+V + + + + +A+K F S++ K
Sbjct: 6 RHIGPYI-----IR----ETLGEGSFGKVKLATHYKTQQKVALK-------FISRQLLKK 49
Query: 112 QDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEA 171
D HP+I++ + + +++E+ GG + + + E
Sbjct: 50 SDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTED 108
Query: 172 VMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAK 231
R + +Q++ +EY H H I+HRD+K N+L+D+ +K+ADFG S + + + K
Sbjct: 109 EGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD---GNFLK 165
Query: 232 SMKGTPYWMAPEVIRQTGHSYS---ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGT 288
+ G+P + APEVI G Y+ D+WS G + M G+ P+ ++ + LF
Sbjct: 166 TSCGSPNYAAPEVI--NGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF--IPNLFKKVN 221
Query: 289 TKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
+ + +P+ LS A+ + + + +P R T E+ + P+
Sbjct: 222 SCVY-VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 102/202 (50%), Gaps = 8/202 (3%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
++G G+FG+V + + EL AVK ++ + ++ D + P
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVK--ILKKDVVIQD---DDVECTMVEKRVLALPGKPP 402
Query: 133 IVRYLGTVREE-ESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
+ L + + + L ++E+V GG + + + G F E Y ++ +GL +L + G
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHS 251
I++RD+K N+++D++G IK+ADFG K+ + K GTP ++APE+I +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTTKXFCGTPDYIAPEIIAYQPYG 520
Query: 252 YSADIWSVGCTVIEMATGKPPW 273
S D W+ G + EM G+ P+
Sbjct: 521 KSVDWWAFGVLLYEMLAGQAPF 542
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 18/171 (10%)
Query: 174 RTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSM 233
++Y K +L + +H HGI+H D+K AN L+ + G +KL DFG + Q+ T S
Sbjct: 110 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQ 168
Query: 234 KGTPYWMAPEVIRQTGHS-----------YSADIWSVGCTVIEMATGKPPWSQQYQEVAA 282
GT +M PE I+ S +D+WS+GC + M GK P+ Q +++
Sbjct: 169 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 228
Query: 283 LFHI---GTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
L I P IPE +D L CL+++P R + ELL HP+V
Sbjct: 229 LHAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYV 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 10/220 (4%)
Query: 129 SHPNIVRYLGTVREEESLNILL-EFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
HPN++ L V E ++ IL+ E V GG + L + E + KQ+L G+ YL
Sbjct: 72 QHPNVIT-LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 188 HNHGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPE 243
H+ I H D+K NI++ ++ IK+ DFG + ++ + K++ GTP ++APE
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPE 187
Query: 244 VIRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
++ AD+WS+G + +G P+ QE A + N S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 303 AKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHAS 342
AKDF+ + L K+P R T + L+HP++ D L ++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 287
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 199
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSXEC 250
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 17/262 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ IG G+FG VY G G++ AVK + + A + +A H
Sbjct: 17 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQA------FKNEVGVLRKTRH 67
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSI-SSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
NI+ ++G + + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 68 VNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVIR
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 250 ---HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE---NLSVKA 303
+S+ +D+++ G + E+ TG+ P+S + +G P + + N +
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 246
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
K + +CL+K+ D RP+ +L
Sbjct: 247 KRLMAECLKKKRDERPSFPRIL 268
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 26/254 (10%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----AVMRTYTKQLLLGLE 185
HPNI+ + + + ++ E GG + + + F E AV+ T TK + E
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTV----E 130
Query: 186 YLHNHGIMHRDIKGANIL-VDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPYW-- 239
YLH G++HRD+K +NIL VD G I++ DFG +KQ+ + TP +
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL------RAENGLLXTPCYTA 184
Query: 240 --MAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQ----QYQEVAALFHIGTTKSHP 293
+APEV+ + G+ + DIWS+G + TG P++ +E+ A G
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSG 244
Query: 294 PIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLHASVMKSSEILSPS 353
++S AKD + K L +P R TA+ +L+HP++ D+ P + + ++ +
Sbjct: 245 GYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGA 304
Query: 354 HVANLESLQMLTSP 367
A +L SP
Sbjct: 305 XAATYSALNRNQSP 318
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 199
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSSEC 250
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 200
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSSEC 251
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 200
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSXEC 251
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 252 QHLIRWCLALRPXDRPTFEEIQNHPWM 278
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 21/272 (7%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ ++G G+FG V + + +G+ AVK + + K+K
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVK---VISKRQVKQKTDKE--SLLREVQLLK 87
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
HPNI++ ++ ++ E GG + + F E +Q+L G+ Y
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 147
Query: 187 LHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMK---GTPYWM 240
+H + I+HRD+K N+L+++K I++ DFG S +K MK GT Y++
Sbjct: 148 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH------FEASKKMKDKIGTAYYI 201
Query: 241 APEVIRQTGHSYSADIWSVGCTVIEMATGKPPW--SQQYQEVAALFHIGTTKSHPPIPEN 298
APEV+ T + D+WS G + + +G PP+ + +Y ++ G P +
Sbjct: 202 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKK 259
Query: 299 LSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
+S AKD + K L P +R +A + L H ++
Sbjct: 260 VSESAKDLIRKMLTYVPSMRISARDALDHEWI 291
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 180
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSXEC 231
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 185
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSSEC 236
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 227
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSXEC 278
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 120/269 (44%), Gaps = 33/269 (12%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQV--LIAANFASKEKAQDHIXXXXXXXXXXXXX 128
GE IG G FG V+ G L+AVK + + +K + I
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY--------- 169
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLG----- 183
SHPNIVR +G +++ + I++E V GG + L G A +R T ++G
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAG 225
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-WMAP 242
+EYL + +HRD+ N LV K +K++DFG S++ A+ + + ++ P W AP
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD-GVYAASGGLRQVPVKWTAP 284
Query: 243 EVIRQTGHSYSADIWSVGCTVIE-MATGKPPW----SQQYQEVAALFHIGTTKSHPPIPE 297
E + +S +D+WS G + E + G P+ +QQ +E P PE
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV------EKGGRLPCPE 338
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLK 326
+ +C EP RP+ S + +
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R+ + IG G FG + + S EL+AVK + EK +++
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYI------ERGEKIDENVKREIINHRSL- 72
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
HPNIVR+ + L I++E+ GG + + G F E R + +QL+ G+ Y
Sbjct: 73 --RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 187 LHNHGIMHRDIKGANILVDNKGC--IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
H + HRD+K N L+D +K+ FG SK S KS GTP ++APEV
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSS---VLHSQPKSTVGTPAYIAPEV 187
Query: 245 IRQTGHS-YSADIWSVGCTVIEMATGKPPW 273
+ + + AD+WS G T+ M G P+
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 213
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSXEC 264
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 120/269 (44%), Gaps = 33/269 (12%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQV--LIAANFASKEKAQDHIXXXXXXXXXXXXX 128
GE IG G FG V+ G L+AVK + + +K + I
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY--------- 169
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLG----- 183
SHPNIVR +G +++ + I++E V GG + L G A +R T ++G
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAG 225
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-WMAP 242
+EYL + +HRD+ N LV K +K++DFG S++ A+ + + ++ P W AP
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD-GVXAASGGLRQVPVKWTAP 284
Query: 243 EVIRQTGHSYSADIWSVGCTVIE-MATGKPPW----SQQYQEVAALFHIGTTKSHPPIPE 297
E + +S +D+WS G + E + G P+ +QQ +E P PE
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV------EKGGRLPCPE 338
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLK 326
+ +C EP RP+ S + +
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 176
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 177 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 232
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSXEC 283
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 284 QHLIRWCLALRPSDRPTFEEIQNHPWM 310
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 184
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSSEC 235
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 17/262 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ IG G+FG VY G G++ AVK + + A + +A H
Sbjct: 13 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQA------FKNEVGVLRKTRH 63
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
NI+ ++G + + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 64 VNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVIR
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 250 ---HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE---NLSVKA 303
+S+ +D+++ G + E+ TG+ P+S +F +G P + + N
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
K + +CL+K+ D RP ++L
Sbjct: 243 KRLMAECLKKKRDERPLFPQIL 264
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 213
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSXEC 264
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 185
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSSEC 236
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 163
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 219
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSSEC 270
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 271 QHLIRWCLALRPSDRPTFEEIQNHPWM 297
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 212
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSSEC 263
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 227
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSSEC 278
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 212
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSXEC 263
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+ + + ++LE V GG + L + E + KQ+L G+ YLH+
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 190 HGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---EAGNEFKNIFGTPEFVAPEIV 190
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
AD+WS+G + +G P+ + QE N S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 250
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFV 330
DF+ + L K+P R ++ L+H ++
Sbjct: 251 DFIRRLLVKDPKRRMXIAQSLEHSWI 276
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+ + + ++LE V GG + L + E + KQ+L G+ YLH+
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 190 HGIMHRDIKGANILVDNKGC----IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---EAGNEFKNIFGTPEFVAPEIV 204
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
AD+WS+G + +G P+ + QE N S AK
Sbjct: 205 NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 264
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFV 330
DF+ + L K+P R ++ L+H ++
Sbjct: 265 DFIRRLLVKDPKRRMXIAQSLEHSWI 290
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 20/172 (11%)
Query: 174 RTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSM 233
++Y K +L + +H HGI+H D+K AN L+ + G +KL DFG + Q+ T S
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 234 KGTPYWMAPEVIRQTGHS-----------YSADIWSVGCTVIEMATGKPPWSQQYQEVAA 282
G +M PE I+ S +D+WS+GC + M GK P+ Q +++
Sbjct: 217 VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 276
Query: 283 LFHIGTTKSH----PPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
L H +H P IPE +D L CL+++P R + ELL HP+V
Sbjct: 277 L-HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 185
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSSEC 236
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 213
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSSEC 264
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 213
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSSEC 264
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 212
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSSEC 263
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 212
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSSEC 263
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 17/262 (6%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ IG G+FG VY G G++ AVK + + A + +A H
Sbjct: 13 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQA------FKNEVGVLRKTRH 63
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
NI+ ++G + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 64 VNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVIR
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 250 ---HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE---NLSVKA 303
+S+ +D+++ G + E+ TG+ P+S +F +G P + + N
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
K + +CL+K+ D RP ++L
Sbjct: 243 KRLMAECLKKKRDERPLFPQIL 264
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 20/172 (11%)
Query: 174 RTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSM 233
++Y K +L + +H HGI+H D+K AN L+ + G +KL DFG + Q+ S
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDXXXVVKDSQ 188
Query: 234 KGTPYWMAPEVIRQTGHS-----------YSADIWSVGCTVIEMATGKPPWSQQYQEVAA 282
GT +M PE I+ S +D+WS+GC + M GK P+ Q +++
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 248
Query: 283 LFHIGTTKSH----PPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
L H +H P IPE +D L CL+++P R + ELL HP+V
Sbjct: 249 L-HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 180
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSSEC 231
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 127
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 183
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSSEC 234
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 235 QHLIRWCLALRPSDRPTFEEIQNHPWM 261
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 102/202 (50%), Gaps = 8/202 (3%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
++G G+FG+V + + EL AVK ++ + ++ D + P
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVK--ILKKDVVIQD---DDVECTMVEKRVLALPGKPP 81
Query: 133 IVRYLGTVREE-ESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
+ L + + + L ++E+V GG + + + G F E Y ++ +GL +L + G
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 141
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHS 251
I++RD+K N+++D++G IK+ADFG K+ + K GTP ++APE+I +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTTKXFCGTPDYIAPEIIAYQPYG 199
Query: 252 YSADIWSVGCTVIEMATGKPPW 273
S D W+ G + EM G+ P+
Sbjct: 200 KSVDWWAFGVLLYEMLAGQAPF 221
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 10/259 (3%)
Query: 69 RKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
++ +++G GAFG VY G+ + GE + + + N + KA
Sbjct: 18 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN---VEFMDEALIMASM 74
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEYL 187
HP++VR LG V ++ ++ + +P G + + + ++ + Q+ G+ YL
Sbjct: 75 DHPHLVRLLG-VCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 133
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
++HRD+ N+LV + +K+ DFG ++ + A K WMA E I
Sbjct: 134 EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 193
Query: 248 TGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
++ +D+WS G T+ E+ T GKP +E+ L G PPI ++
Sbjct: 194 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPI---CTIDVYM 250
Query: 306 FLLKCLEKEPDLRPTASEL 324
++KC + D RP EL
Sbjct: 251 VMVKCWMIDADSRPKFKEL 269
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 21/262 (8%)
Query: 73 LIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+IG G FG V G + L +AV + + K++ +D + HP
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQR-RDFLCEASIMGQF----DHP 104
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHNH 190
N+V G V + + I++EF+ G++ + L K G F + + + G+ YL +
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADM 164
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAE----LATVSGAKSMKGTPY-WMAPEVI 245
G +HRD+ NILV++ K++DFG S+ + + + T +G K P W APE I
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK----IPVRWTAPEAI 220
Query: 246 RQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG---YRLPAPMDCPAGL 277
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
+L C +KE RP +++
Sbjct: 278 HQLMLDCWQKERAERPKFEQIV 299
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 12/261 (4%)
Query: 70 KGELIGCGAFGRVYMGM-NLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+ ++IG G FG VY GM SG+ K+V +A +
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGK----KEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-KFGPFPEAVMRTYTKQLLLGLEYL 187
SH NI+R G + + + + I+ E++ G++ L K G F + + + G++YL
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-WMAPEVIR 246
N +HRD+ NILV++ K++DFG S+ + + + S P W APE I
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 247 QTGHSYSADIWSVGCTVIEMATG--KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ ++D+WS G + E+ T +P W EV + G P P +
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF---RLPTPMDCPSAIY 280
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+++C ++E RP ++++
Sbjct: 281 QLMMQCWQQERARRPKFADIV 301
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R+ + IG G FG + + S EL+AVK + E+ +
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---------ERGEKIDENVKREIINHR 70
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
HPNIVR+ + L I++E+ GG + + G F E R + +QL+ G+ Y
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 187 LHNHGIMHRDIKGANILVDNKGC--IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
H + HRD+K N L+D +K+ FG SK S K GTP ++APEV
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSS---VLHSQPKDTVGTPAYIAPEV 187
Query: 245 IRQTGHS-YSADIWSVGCTVIEMATGKPPW 273
+ + + AD+WS G T+ M G P+
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 10/259 (3%)
Query: 69 RKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
++ +++G GAFG VY G+ + GE + + + N + KA
Sbjct: 41 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM--- 97
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEYL 187
HP++VR LG V ++ ++ + +P G + + + ++ + Q+ G+ YL
Sbjct: 98 DHPHLVRLLG-VCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 156
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
++HRD+ N+LV + +K+ DFG ++ + A K WMA E I
Sbjct: 157 EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 216
Query: 248 TGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
++ +D+WS G T+ E+ T GKP +E+ L G PPI ++
Sbjct: 217 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPI---CTIDVYM 273
Query: 306 FLLKCLEKEPDLRPTASEL 324
++KC + D RP EL
Sbjct: 274 VMVKCWMIDADSRPKFKEL 292
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + ++ A+ KA I
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV-- 108
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 109 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 166
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 167 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 283
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 284 MIMVKCWMIDADSRPKFRELI 304
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
+++ G L+G G FG VY G+ + +A+K V E
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 127 XXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
++R L +S ++LE P + + + G E + R++ Q+L +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 186 YLHNHGIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
+ HN G++HRDIK NIL+D N+G +KL DFG+ + + GT + PE
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEW 180
Query: 245 IR-QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
IR H SA +WS+G + +M G P+ + + + +S +
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF---------FRQRVSSEC 231
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFV 330
+ + CL P RPT E+ HP++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 78
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++++ +P G + + + + + Q+ G+ Y
Sbjct: 79 -DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 253
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 254 MIMVKCWMIDADSRPKFRELI 274
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHI-XXXXXXXXXXXXXSH 130
E IG G +G VY N + GE A+K++ + EK + I H
Sbjct: 8 EKIGEGTYGVVYKAQN-NYGETFALKKIRL-------EKEDEGIPSTTIREISILKELKH 59
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
NIV+ + ++ L ++ E + L G +++ QLL G+ Y H+
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT-G 249
++HRD+K N+L++ +G +K+ADFG ++ V T ++ AP+V+ +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 250 HSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHI-GTTKS--------------- 291
+S + DIWSVGC EM G P P + ++ +F I GT S
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 292 ---HPPIP-----ENLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
+ P+P + L D L K L+ +P+ R TA + L+H +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHI-XXXXXXXXXXXXXSH 130
E IG G +G VY N + GE A+K++ + EK + I H
Sbjct: 8 EKIGEGTYGVVYKAQN-NYGETFALKKIRL-------EKEDEGIPSTTIREISILKELKH 59
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
NIV+ + ++ L ++ E + L G +++ QLL G+ Y H+
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT-G 249
++HRD+K N+L++ +G +K+ADFG ++ V T ++ AP+V+ +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 250 HSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHI-GTTKS--------------- 291
+S + DIWSVGC EM G P P + ++ +F I GT S
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 292 ---HPPIP-----ENLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
+ P+P + L D L K L+ +P+ R TA + L+H +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHI-XXXXXXXXXXXXXSH 130
E IG G +G VY N + GE A+K++ + EK + I H
Sbjct: 8 EKIGEGTYGVVYKAQN-NYGETFALKKIRL-------EKEDEGIPSTTIREISILKELKH 59
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
NIV+ + ++ L ++ E + L G +++ QLL G+ Y H+
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT-G 249
++HRD+K N+L++ +G +K+ADFG ++ V T ++ AP+V+ +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 250 HSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHI-GTTKS--------------- 291
+S + DIWSVGC EM G P P + ++ +F I GT S
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 292 ---HPPIP-----ENLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
+ P+P + L D L K L+ +P+ R TA + L+H +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 130/270 (48%), Gaps = 32/270 (11%)
Query: 69 RKGELIGCGAFGRVYMGMNLDSGELL----AVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
RK +++G G FG V+ G+ + GE + +K + + S + DH+
Sbjct: 34 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL--- 90
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQL 180
H +IVR LG SL ++ +++P GS+ + G GP ++ + Q+
Sbjct: 91 ----DHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGP---QLLLNWGVQI 142
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG---TP 237
G+ YL HG++HR++ N+L+ + +++ADFG VA+L + + TP
Sbjct: 143 AKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFG----VADLLPPDDKQLLYSEAKTP 198
Query: 238 Y-WMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWS-QQYQEVAALFHIGTTKSHPP 294
WMA E I +++ +D+WS G TV E+ T G P++ + EV L G + P
Sbjct: 199 IKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQ 258
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASEL 324
I ++ ++KC + ++RPT EL
Sbjct: 259 I---CTIDVYMVMVKCWMIDENIRPTFKEL 285
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 76
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++++ +P G + + + + + Q+ G+ Y
Sbjct: 77 -DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 251
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 252 MIMVKCWMIDADSRPKFRELI 272
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 75
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++++ +P G + + + + + Q+ G+ Y
Sbjct: 76 -DNPHVCRLLGICLTS-TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 250
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 251 MIMVKCWMIDADSRPKFRELI 271
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 75
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++++ +P G + + + + + Q+ G+ Y
Sbjct: 76 -DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 250
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 251 MIMVKCWMIDADSRPKFRELI 271
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 36/293 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
++ K E IG G +G V+ N ++ E++A+K+V + + +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRL------DDDDEGVPSSALREICLLK 56
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
H NIVR + ++ L ++ EF G +++++ QLL GL +
Sbjct: 57 ELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H+ ++HRD+K N+L++ G +KLADFG ++ A+ + T ++ P+V+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVLF 174
Query: 247 QTG-HSYSADIWSVGCTVIEMATGKPPW------SQQYQEVAALFHIGTTKSHP------ 293
+S S D+WS GC E+A P Q + + L T + P
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234
Query: 294 ---PIPE------------NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVT 331
P P L+ +D L L+ P R +A E L+HP+ +
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 74
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++++ +P G + + + + + Q+ G+ Y
Sbjct: 75 -DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 249
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 78
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++++ +P G + + + + + Q+ G+ Y
Sbjct: 79 -DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 253
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 254 MIMVKCWMIDADSRPKFRELI 274
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 76
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++++ +P G + + + + + Q+ G+ Y
Sbjct: 77 -DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 251
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 252 MIMVKCWMIDADSRPKFRELI 272
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 127/286 (44%), Gaps = 20/286 (6%)
Query: 55 HISPS--VKMSPPI---RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE 109
H +P V+ S I R++ ++G G+FG V + + +G+ AVK + + K+
Sbjct: 10 HATPGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVK---VISKRQVKQ 66
Query: 110 KAQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFP 169
K HPNI + ++ ++ E GG + + F
Sbjct: 67 KTDKE--SLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 124
Query: 170 EAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELAT 226
E +Q+L G+ Y H + I+HRD+K N+L+++K I++ DFG S
Sbjct: 125 EVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEA 181
Query: 227 VSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPW--SQQYQEVAALF 284
K GT Y++APEV+ T + D+WS G + + +G PP+ + +Y ++
Sbjct: 182 SKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKKV 239
Query: 285 HIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
G P + +S AKD + K L P R +A + L H ++
Sbjct: 240 EKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWI 285
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 77
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++++ +P G + + + + + Q+ G+ Y
Sbjct: 78 -DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 252
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 253 MIMVKCWMIDADSRPKFRELI 273
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 28/266 (10%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G GAFG V++ SG +K + +K+++Q + HPNI
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTI-------NKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 134 VRYLGTVREEESLNILLEFVPGGS----ISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
++ + ++ I++E GG I S + E + KQ++ L Y H+
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 190 HGIMHRDIKGANILVDN---KGCIKLADFGASKQVAEL-ATVSGAKSMKGTPYWMAPEVI 245
++H+D+K NIL + IK+ DFG +AEL + + + GT +MAPEV
Sbjct: 143 QHVVHKDLKPENILFQDTSPHSPIKIIDFG----LAELFKSDEHSTNAAGTALYMAPEVF 198
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWS----QQYQEVAALFHIGTTKSHPPIPENLSV 301
++ ++ DIWS G + + TG P++ ++ Q+ A P L+
Sbjct: 199 KRDV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP----LTP 253
Query: 302 KAKDFLLKCLEKEPDLRPTASELLKH 327
+A D L + L K+P+ RP+A+++L H
Sbjct: 254 QAVDLLKQMLTKDPERRPSAAQVLHH 279
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 26/275 (9%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E IG G F +V + ++ +GE++A+K K + H
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIK-------IMDKNTLGSDLPRIKTEIEALKNLRHQ 68
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
+I + + + ++LE+ PGG + + E R +Q++ + Y+H+ G
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG 128
Query: 192 IMHRDIKGANILVDNKGCIKLADFGAS-----KQVAELATVSGAKSMKGTPYWMAPEVIR 246
HRD+K N+L D +KL DFG + L T G+ + + APE+I+
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA------YAAPELIQ 182
Query: 247 QTGHSY---SADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
G SY AD+WS+G + + G P+ V AL+ + +P+ LS +
Sbjct: 183 --GKSYLGSEADVWSMGILLYVLMCGFLPFDD--DNVMALYK-KIMRGKYDVPKWLSPSS 237
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
L + L+ +P R + LL HP++ D PV
Sbjct: 238 ILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPV 272
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 145/332 (43%), Gaps = 76/332 (22%)
Query: 69 RKGELI---GCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
RK EL+ G GA+G V+ ++ +GE++AVK++ F + + + D
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-----FDAFQNSTDAQRTFREIMILT 63
Query: 126 XXXSHPNIVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYT-KQLLLG 183
H NIV L +R + ++ L F + +++ E V + Y QL+
Sbjct: 64 ELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIR--ANILEPVHKQYVVYQLIKV 121
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSG-------------- 229
++YLH+ G++HRD+K +NIL++ + +K+ADFG S+ + V+
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 230 -----AKSMKGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP------------ 271
T ++ APE++ T ++ D+WS+GC + E+ GKP
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLE 241
Query: 272 --------PWSQQYQEVAALF---HIGTTKSHPPIPE-----------NLSVK------- 302
P ++ + + + F I + K I + NL +K
Sbjct: 242 RIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADC 301
Query: 303 ---AKDFLLKCLEKEPDLRPTASELLKHPFVT 331
A D L K L+ P+ R +A++ LKHPFV+
Sbjct: 302 NEEALDLLDKLLQFNPNKRISANDALKHPFVS 333
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 111/249 (44%), Gaps = 11/249 (4%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+GCG FG V G+ + KQ+ +A + + +P I
Sbjct: 18 LGCGNFGSVRQGVYR-----MRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 72
Query: 134 VRYLGTVREEESLNILLEFVPGGSISS-LLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
VR +G V + E+L +++E GG + L+GK P + + Q+ +G++YL
Sbjct: 73 VRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-WMAPEVIRQTGHS 251
+HRD+ N+L+ N+ K++DFG SK + + A+S P W APE I S
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 252 YSADIWSVGCTVIE-MATGKPPWSQQYQ-EVAALFHIGTTKSHPP-IPENLSVKAKDFLL 308
+D+WS G T+ E ++ G+ P+ + EV A G PP P L D +
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWI 251
Query: 309 KCLEKEPDL 317
E PD
Sbjct: 252 YKWEDRPDF 260
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 74 IGCGAFGRV----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG+V Y ++GE +AVK + E +HI
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSL-------KPESGGNHIADLKKEIEILRNLY 81
Query: 130 HPNIVRYLGTVREE--ESLNILLEFVPGGSISSLLGK-FGPFPEAVMRTYTKQLLLGLEY 186
H NIV+Y G E+ + +++EF+P GS+ L K Y Q+ G++Y
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 141
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L + +HRD+ N+LV+++ +K+ DFG +K + K + +P +W APE +
Sbjct: 142 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
Q+ ++D+WS G T+ E+ T
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 36/293 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
++ K E IG G +G V+ N ++ E++A+K+V + + +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRL------DDDDEGVPSSALREICLLK 56
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEY 186
H NIVR + ++ L ++ EF G +++++ QLL GL +
Sbjct: 57 ELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
H+ ++HRD+K N+L++ G +KLA+FG ++ A+ + T ++ P+V+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVLF 174
Query: 247 QTG-HSYSADIWSVGCTVIEMA-TGKP--PWSQQYQEVAALFHIGTT------------- 289
+S S D+WS GC E+A G+P P + ++ +F + T
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234
Query: 290 --KSHPPIPEN---------LSVKAKDFLLKCLEKEPDLRPTASELLKHPFVT 331
K +P P L+ +D L L+ P R +A E L+HP+ +
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 11/249 (4%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+GCG FG V G+ + KQ+ +A + + +P I
Sbjct: 344 LGCGNFGSVRQGVYR-----MRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 398
Query: 134 VRYLGTVREEESLNILLEFVPGGSISS-LLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
VR +G V + E+L +++E GG + L+GK P + + Q+ +G++YL
Sbjct: 399 VRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-WMAPEVIRQTGHS 251
+HR++ N+L+ N+ K++DFG SK + + A+S P W APE I S
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 252 YSADIWSVGCTVIE-MATGKPPWSQQYQ-EVAALFHIGTTKSHPP-IPENLSVKAKDFLL 308
+D+WS G T+ E ++ G+ P+ + EV A G PP P L D +
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWI 577
Query: 309 KCLEKEPDL 317
E PD
Sbjct: 578 YKWEDRPDF 586
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 130/270 (48%), Gaps = 32/270 (11%)
Query: 69 RKGELIGCGAFGRVYMGMNLDSGELL----AVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
RK +++G G FG V+ G+ + GE + +K + + S + DH+
Sbjct: 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL--- 72
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQL 180
H +IVR LG SL ++ +++P GS+ + G GP ++ + Q+
Sbjct: 73 ----DHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGP---QLLLNWGVQI 124
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG---TP 237
G+ YL HG++HR++ N+L+ + +++ADFG VA+L + + TP
Sbjct: 125 AKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFG----VADLLPPDDKQLLYSEAKTP 180
Query: 238 Y-WMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWS-QQYQEVAALFHIGTTKSHPP 294
WMA E I +++ +D+WS G TV E+ T G P++ + EV L G + P
Sbjct: 181 IKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQ 240
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASEL 324
I ++ ++KC + ++RPT EL
Sbjct: 241 I---CTIDVYMVMVKCWMIDENIRPTFKEL 267
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 76
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++++ +P G + + + + + Q+ G+ Y
Sbjct: 77 -DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 251
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ KC + D RP EL+
Sbjct: 252 MIMRKCWMIDADSRPKFRELI 272
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 76
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 77 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 251
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 252 MIMVKCWMIDADSRPKFRELI 272
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 74 IGCGAFGRV----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG+V Y ++GE +AVK + E +HI
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSL-------KPESGGNHIADLKKEIEILRNLY 69
Query: 130 HPNIVRYLGTVREE--ESLNILLEFVPGGSISSLLGK-FGPFPEAVMRTYTKQLLLGLEY 186
H NIV+Y G E+ + +++EF+P GS+ L K Y Q+ G++Y
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 129
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L + +HRD+ N+LV+++ +K+ DFG +K + K + +P +W APE +
Sbjct: 130 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
Q+ ++D+WS G T+ E+ T
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 99
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 100 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 274
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 275 MIMVKCWMIDADSRPKFRELI 295
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 74
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 75 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 249
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 55/299 (18%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+ K + +G G + VY G + + L+A+K++ + E +
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRL-------EHEEGAPCTAIREVSLLKD 56
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
H NIV + E+SL ++ E++ + L G ++ + QLL GL Y
Sbjct: 57 LKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAY 115
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-------W 239
H ++HRD+K N+L++ +G +KLADFG ++ AKS+ Y W
Sbjct: 116 CHRQKVLHRDLKPQNLLINERGELKLADFGLAR----------AKSIPTKTYDNEVVTLW 165
Query: 240 MAPE--VIRQTGHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIG---TTKSH 292
P ++ T +S D+W VGC EMATG+P P S +++ +F I T ++
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETW 225
Query: 293 PPIPENLSVK----------------------AKDFLLKCLEKEPDLRPTASELLKHPF 329
P I N K D L K L+ E R +A + +KHPF
Sbjct: 226 PGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 74
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 75 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 249
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 80
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 81 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 199 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 255
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 256 MIMVKCWMIDADSRPKFRELI 276
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 74
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 75 -DNPHVCRLLGICLTS-TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 249
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 81
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 82 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 256
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 81
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 82 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 256
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 77
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 78 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 252
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 253 MIMVKCWMIDADSRPKFRELI 273
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 77
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 78 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 252
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 253 MIMVKCWMIDADSRPKFRELI 273
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 130/293 (44%), Gaps = 53/293 (18%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G GA+G V ++ SGE +A+K+ ++ F S+ A+ H N+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKK--LSRPFQSEIFAK----RAYRELLLLKHMQHENV 103
Query: 134 VRYLGTVREEESLNILLEF-----VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
+ L SL +F + ++G F E ++ Q+L GL+Y+H
Sbjct: 104 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIH 161
Query: 189 NHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
+ G++HRD+K N+ V+ +K+ DFG ++ A ++G T ++ APEVI
Sbjct: 162 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD--AEMTGYVV---TRWYRAPEVILSW 216
Query: 249 GH-SYSADIWSVGCTVIEMATGKP-----------------------PWSQQYQEVAALF 284
H + + DIWSVGC + EM TGK + Q+ + AA
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 276
Query: 285 HIGTTKSHPPIPEN--------LSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
+I +S P P S +A D L K LE + D R TA++ L HPF
Sbjct: 277 YI---QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 130/277 (46%), Gaps = 43/277 (15%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G+FG VY G G++ AVK + + + + H NI
Sbjct: 44 IGSGSFGTVYKGKW--HGDV-AVKILKVV------DPTPEQFQAFRNEVAVLRKTRHVNI 94
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
+ ++G + +++L I+ ++ G S+ L KF F + T Q G++YLH
Sbjct: 95 LLFMGYM-TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ---GMDYLHA 150
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATV----SGAKSMK---GTPYWMAP 242
I+HRD+K NI + +K+ DFG LATV SG++ ++ G+ WMAP
Sbjct: 151 KNIIHRDMKSNNIFLHEGLTVKIGDFG-------LATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 243 EVIRQTGH---SYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHP---PIP 296
EVIR + S+ +D++S G + E+ TG+ P+S +F +G + P +
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLY 263
Query: 297 ENLSVKAKDFLLKCLEKEPDLRP------TASELLKH 327
+N K + C++K + RP ++ ELL+H
Sbjct: 264 KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 129/270 (47%), Gaps = 23/270 (8%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANF-ASKEKAQDHIXXXXXXXXXXXXXSH 130
E +G GAFG V+ + +G + K I + K ++ I H
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAK--FINTPYPLDKYTVKNEISIMNQL-------HH 107
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSI-SSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
P ++ ++ + ++LEF+ GG + + + EA + Y +Q GL+++H
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 167
Query: 190 HGIMHRDIKGANILVDNKGC--IKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVI 245
H I+H DIK NI+ + K +K+ DFG + ++ E+ V+ A T + APE++
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-----TAEFAAPEIV 222
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT--KSHPPIPENLSVKA 303
+ + D+W++G + +G P++ + ++ L ++ + ++S +A
Sbjct: 223 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGE-DDLETLQNVKRCDWEFDEDAFSSVSPEA 281
Query: 304 KDFLLKCLEKEPDLRPTASELLKHPFVTGD 333
KDF+ L+KEP R T + L+HP++ GD
Sbjct: 282 KDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 68
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 69 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 243
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 244 MIMVKCWMIDADSRPKFRELI 264
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 129/290 (44%), Gaps = 47/290 (16%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G GA+G V ++ SGE +A+K+ ++ F S+ A+ H N+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKK--LSRPFQSEIFAK----RAYRELLLLKHMQHENV 85
Query: 134 VRYLGTVREEESLNILLEF-----VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
+ L SL +F + ++G F E ++ Q+L GL+Y+H
Sbjct: 86 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIH 143
Query: 189 NHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
+ G++HRD+K N+ V+ +K+ DFG ++ A ++G T ++ APEVI
Sbjct: 144 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD--AEMTGYVV---TRWYRAPEVILSW 198
Query: 249 GH-SYSADIWSVGCTVIEMATGKP-----------------------PWSQQYQEVAALF 284
H + + DIWSVGC + EM TGK + Q+ + AA
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 258
Query: 285 HIGTT-----KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
+I + K + S +A D L K LE + D R TA++ L HPF
Sbjct: 259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 116/229 (50%), Gaps = 11/229 (4%)
Query: 141 REEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKG 199
++E L +++++ GG + +LL KF PE + R Y +++L ++ +H +HRDIK
Sbjct: 160 QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKP 219
Query: 200 ANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT-----GHSYSA 254
N+L+D G I+LADFG+ ++ + TV + ++ GTP +++PE+++ +
Sbjct: 220 DNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQAMEDGMGKYGPEC 278
Query: 255 DIWSVGCTVIEMATGKPPWSQQ--YQEVAALFHIGTTKSHPPIPENLSVKAKDFL--LKC 310
D WS+G + EM G+ P+ + + + + P ++S +AKD + L C
Sbjct: 279 DWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLIC 338
Query: 311 LEKEPDLRPTASELLKHPFVTGDDEDPVLHASVMKSSEILSPSHVANLE 359
+ + + KH F G + + + + ++ SPS +N +
Sbjct: 339 SRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFD 387
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 71
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 72 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 190 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 246
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 247 MIMVKCWMIDADSRPKFRELI 267
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 116/229 (50%), Gaps = 11/229 (4%)
Query: 141 REEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKG 199
++E L +++++ GG + +LL KF PE + R Y +++L ++ +H +HRDIK
Sbjct: 144 QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKP 203
Query: 200 ANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT-----GHSYSA 254
N+L+D G I+LADFG+ ++ + TV + ++ GTP +++PE+++ +
Sbjct: 204 DNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQAMEDGMGKYGPEC 262
Query: 255 DIWSVGCTVIEMATGKPPWSQQ--YQEVAALFHIGTTKSHPPIPENLSVKAKDFL--LKC 310
D WS+G + EM G+ P+ + + + + P ++S +AKD + L C
Sbjct: 263 DWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLIC 322
Query: 311 LEKEPDLRPTASELLKHPFVTGDDEDPVLHASVMKSSEILSPSHVANLE 359
+ + + KH F G + + + + ++ SPS +N +
Sbjct: 323 SRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFD 371
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 20/261 (7%)
Query: 71 GELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
G IG G FG V+ G+ + + +A+K + + +EK
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE-------ALTMRQ 67
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG--KFGPFPEAVMRTYTKQLLLGLE 185
HP+IV+ +G + E + I++E G + S L KF A + Y QL L
Sbjct: 68 FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALA 125
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
YL + +HRDI N+LV + C+KL DFG S+ + E +T A K WMAPE I
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLPIKWMAPESI 184
Query: 246 RQTGHSYSADIWSVGCTVIE--MATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ ++D+W G + E M KP + +V G P+P N
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPMPPNCPPTL 241
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
+ KC +P RP +EL
Sbjct: 242 YSLMTKCWAYDPSRRPRFTEL 262
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 76
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 77 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 251
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ KC + D RP EL+
Sbjct: 252 MIMRKCWMIDADSRPKFRELI 272
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
+++G G FG V G + L S + ++V + + K++ +D + H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DH 105
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+R G V + + + I+ E++ GS+ S L K F + + + G++YL +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
G +HRD+ NIL+++ K++DFG S+ + A T G ++ W +PE
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTSPEA 221
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAA 278
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFP---EAVMRTYTKQLLLGLE 185
+HPNIV+ G L ++E+ GGS+ ++L P P A ++ Q G+
Sbjct: 60 NHPNIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 117
Query: 186 YLHN---HGIMHRDIKGANILVDNKGCI-KLADFGASKQVAELATVSGAKSMKGTPYWMA 241
YLH+ ++HRD+K N+L+ G + K+ DFG + + T + KG+ WMA
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT-----NNKGSAAWMA 172
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSV 301
PEV + +S D++S G + E+ T + P+ + + + PP+ +NL
Sbjct: 173 PEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK 232
Query: 302 KAKDFLLKCLEKEPDLRPTASELLK 326
+ + +C K+P RP+ E++K
Sbjct: 233 PIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 84
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 85 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 259
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ KC + D RP EL+
Sbjct: 260 MIMRKCWMIDADSRPKFRELI 280
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++ GAFG VY G+ + GE + + + A+ KA I
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 81
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++++ +P G + + + + + Q+ G+ Y
Sbjct: 82 -DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 256
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
+++G G FG V G + L S + ++V + + K++ +D + H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DH 105
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+R G V + + + I+ E++ GS+ S L K F + + + G++YL +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
G +HRD+ NIL+++ K++DFG S+ + A T G ++ W +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTSPEA 221
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAA 278
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 113/265 (42%), Gaps = 20/265 (7%)
Query: 67 RWRKGELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXX 123
R G IG G FG V+ G+ + + +A+K + + +EK
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-------FLQEAL 443
Query: 124 XXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG--KFGPFPEAVMRTYTKQLL 181
HP+IV+ +G + E + I++E G + S L KF A + Y QL
Sbjct: 444 TMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLS 501
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
L YL + +HRDI N+LV + C+KL DFG S+ + E +T A K WMA
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMA 560
Query: 242 PEVIRQTGHSYSADIWSVGCTVIE--MATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL 299
PE I + ++D+W G + E M KP + +V G P+P N
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPMPPNC 617
Query: 300 SVKAKDFLLKCLEKEPDLRPTASEL 324
+ KC +P RP +EL
Sbjct: 618 PPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
+++G G FG V G + L S + ++V + + K++ +D + H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DH 105
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+R G V + + + I+ E++ GS+ S L K F + + + G++YL +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
G +HRD+ NIL+++ K++DFG S+ + A T G ++ W +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTSPEA 221
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAA 278
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
+++G G FG V G + L S + ++V + + K++ +D + H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DH 105
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+R G V + + + I+ E++ GS+ S L K F + + + G++YL +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
G +HRD+ NIL+++ K++DFG S+ + A T G ++ W +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTSPEA 221
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAA 278
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFP---EAVMRTYTKQLLLGLE 185
+HPNIV+ G L ++E+ GGS+ ++L P P A ++ Q G+
Sbjct: 59 NHPNIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 186 YLHN---HGIMHRDIKGANILVDNKGCI-KLADFGASKQVAELATVSGAKSMKGTPYWMA 241
YLH+ ++HRD+K N+L+ G + K+ DFG + + T + KG+ WMA
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT-----NNKGSAAWMA 171
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSV 301
PEV + +S D++S G + E+ T + P+ + + + PP+ +NL
Sbjct: 172 PEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK 231
Query: 302 KAKDFLLKCLEKEPDLRPTASELLK 326
+ + +C K+P RP+ E++K
Sbjct: 232 PIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
+++G G FG V G + L S + ++V + + K++ +D + H
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DH 103
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+R G V + + + I+ E++ GS+ S L K F + + + G++YL +
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 163
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
G +HRD+ NIL+++ K++DFG S+ + A T G ++ W +PE
Sbjct: 164 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTSPEA 219
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 220 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAA 276
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 277 LYQLMLDCWQKDRNNRPKFEQIV 299
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
+++G G FG V G + L S + ++V + + K++ +D + H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DH 105
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+R G V + + + I+ E++ GS+ S L K F + + + G++YL +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
G +HRD+ NIL+++ K++DFG S+ + A T G ++ W +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTSPEA 221
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAA 278
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 77
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 78 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 252
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ KC + D RP EL+
Sbjct: 253 MIMRKCWMIDADSRPKFRELI 273
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
+++G G FG V G + L S + ++V + + K++ +D + H
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DH 76
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+R G V + + + I+ E++ GS+ S L K F + + + G++YL +
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
G +HRD+ NIL+++ K++DFG S+ + A T G ++ W +PE
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTSPEA 192
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAA 249
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 250 LYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
+++G G FG V G + L S + ++V + + K++ +D + H
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DH 93
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+R G V + + + I+ E++ GS+ S L K F + + + G++YL +
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 153
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
G +HRD+ NIL+++ K++DFG S+ + A T G ++ W +PE
Sbjct: 154 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTSPEA 209
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 210 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAA 266
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 267 LYQLMLDCWQKDRNNRPKFEQIV 289
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 21/262 (8%)
Query: 73 LIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+IG G FG V G + L L V + + K++ +D + HP
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DHP 83
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHNH 190
NI+ G V + + + I+ E++ GS+ + L K G F + + + G++YL +
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDM 143
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEVI 245
G +HRD+ NIL+++ K++DFG S+ + A T G ++ W APE I
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTAPEAI 199
Query: 246 RQTGHSYSADIWSVGCTVIEMATG--KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ ++D+WS G + E+ + +P W Q+V G P P +
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG---YRLPSPMDCPAAL 256
Query: 304 KDFLLKCLEKEPDLRPTASELL 325
+L C +KE + RP E++
Sbjct: 257 YQLMLDCWQKERNSRPKFDEIV 278
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 123/306 (40%), Gaps = 52/306 (16%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G++G V + + + + A+K ++ N + +D + HPNI
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIK--IMNKNKIRQINPKD-VERIKTEVRLMKKLHHPNI 90
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKF-----------------GPFPEA----- 171
R +E+ + +++E GG + L F P PE
Sbjct: 91 ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAI 150
Query: 172 ------------------VMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVD-NKGC-IK 211
++ +Q+ L YLHN GI HRDIK N L NK IK
Sbjct: 151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIK 210
Query: 212 LADFGASKQVAEL--ATVSGAKSMKGTPYWMAPEVIRQTGHSY--SADIWSVGCTVIEMA 267
L DFG SK+ +L G + GTPY++APEV+ T SY D WS G + +
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270
Query: 268 TGKPPW--SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
G P+ ++ + + +P LS A+D L L + D R A L
Sbjct: 271 MGAVPFPGVNDADTISQVLNKKLCFENPNY-NVLSPLARDLLSNLLNRNVDERFDAMRAL 329
Query: 326 KHPFVT 331
+HP+++
Sbjct: 330 QHPWIS 335
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 119/277 (42%), Gaps = 26/277 (9%)
Query: 71 GELIGCGAFGRVYM----GMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
G+ +G GAFG+V M G++ D + V + + A++E D +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIG- 98
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPEAVMR- 174
H NI+ LG ++ L +++E+ G++ L P PE M
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 175 ----TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
+ T QL G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTT 289
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKE 274
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P N + + + C P RPT +L++
Sbjct: 275 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 69 RKGELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
R E +G G+FG V G + SG+ ++V + + S+ +A D
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 72
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEY 186
H N++R G V + ++ E P GS+ L K G F + Y Q+ G+ Y
Sbjct: 73 -DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-WMAPEVI 245
L + +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE +
Sbjct: 131 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 246 RQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ S+++D W G T+ EM T G+ PW L I P PE+
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDIY 249
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ +++C +P+ RPT L
Sbjct: 250 NVMVQCWAHKPEDRPTFVAL 269
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 111/261 (42%), Gaps = 20/261 (7%)
Query: 71 GELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
G IG G FG V+ G+ + + +A+K + + +EK
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE-------ALTMRQ 67
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG--KFGPFPEAVMRTYTKQLLLGLE 185
HP+IV+ +G + E + I++E G + S L KF A + Y QL L
Sbjct: 68 FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALA 125
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
YL + +HRDI N+LV C+KL DFG S+ + E +T A K WMAPE I
Sbjct: 126 YLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI 184
Query: 246 RQTGHSYSADIWSVGCTVIE--MATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ ++D+W G + E M KP + +V G P+P N
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPMPPNCPPTL 241
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
+ KC +P RP +EL
Sbjct: 242 YSLMTKCWAYDPSRRPRFTEL 262
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 112/265 (42%), Gaps = 20/265 (7%)
Query: 67 RWRKGELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXX 123
R G IG G FG V+ G+ + + +A+K + + +EK
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-------FLQEAL 443
Query: 124 XXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG--KFGPFPEAVMRTYTKQLL 181
HP+IV+ +G + E + I++E G + S L KF A + Y QL
Sbjct: 444 TMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLS 501
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
L YL + +HRDI N+LV C+KL DFG S+ + E +T A K WMA
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMA 560
Query: 242 PEVIRQTGHSYSADIWSVGCTVIE--MATGKPPWSQQYQEVAALFHIGTTKSHPPIPENL 299
PE I + ++D+W G + E M KP + +V G P+P N
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPMPPNC 617
Query: 300 SVKAKDFLLKCLEKEPDLRPTASEL 324
+ KC +P RP +EL
Sbjct: 618 PPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 71 GELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
G IG G FG V+ G+ + + +A+K + + +EK
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE-------ALTMRQ 67
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-KFGPFPEAVMRTYTKQLLLGLEY 186
HP+IV+ +G + E + I++E G + S L + A + Y QL L Y
Sbjct: 68 FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + +HRDI N+LV + C+KL DFG S+ + E +T A K WMAPE I
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 185
Query: 247 QTGHSYSADIWSVGCTVIE--MATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ ++D+W G + E M KP + +V G P+P N
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPMPPNCPPTLY 242
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ KC +P RP +EL
Sbjct: 243 SLMTKCWAYDPSRRPRFTEL 262
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++ GAFG VY G+ + GE + + + A+ KA I
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 74
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 75 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 249
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++G GAFG VY G+ + GE + + + A+ KA I
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 74
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 75 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 249
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ KC + D RP EL+
Sbjct: 250 MIMRKCWMIDADSRPKFRELI 270
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 138/290 (47%), Gaps = 39/290 (13%)
Query: 59 SVKMSPPIRWRKGELIGCGAFGR-VYMGMNLDSGELLAVKQVL-IAANFASKEKAQDHIX 116
SV + I + +++G GA G VY GM D+ ++ AVK++L +FA +E
Sbjct: 17 SVVIVGKISFCPKDVLGHGAEGTIVYRGM-FDNRDV-AVKRILPECFSFADRE------- 67
Query: 117 XXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSL----LGKFGPFPEAV 172
HPN++RY T ++ + I +E + G P +
Sbjct: 68 ----VQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITL 123
Query: 173 MRTYTKQLLLGLEYLHNHGIMHRDIKGANILV---DNKGCIK--LADFGASKQVAE-LAT 226
++ T GL +LH+ I+HRD+K NIL+ + G IK ++DFG K++A +
Sbjct: 124 LQQTTS----GLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179
Query: 227 VSGAKSMKGTPYWMAPEVIRQTGH---SYSADIWSVGCTVIE-MATGKPPWSQQYQEVAA 282
S + GT W+APE++ + +Y+ DI+S GC ++ G P+ + Q A
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN 239
Query: 283 LFHIGTTK---SHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
+ +G HP E+ V A++ + K + +P RP+A +LKHPF
Sbjct: 240 IL-LGACSLDCLHPEKHED--VIARELIEKMIAMDPQKRPSAKHVLKHPF 286
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + G G FG V +G +G +A+K+V+ F ++E
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE---------LQIMQDLA 74
Query: 127 XXSHPNIVR---YLGTV----REEESLNILLEFVPGGSISSLLGKF----GPFPEAVMRT 175
HPNIV+ Y T+ R + LN+++E+VP + P P +++
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAP-PPILIKV 133
Query: 176 YTKQLL--LGLEYLHNHGIMHRDIKGANILVDNK-GCIKLADFGASKQVAELATVSGAKS 232
+ QL+ +G +L + + HRDIK N+LV+ G +KL DFG++K+ L+ +
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKK---LSPSEPNVA 190
Query: 233 MKGTPYWMAPEVIRQTGHSYSA-DIWSVGCTVIEMATGKP 271
+ Y+ APE+I H +A DIWSVGC EM G+P
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 71 GELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
G IG G FG V+ G+ + + +A+K + + +EK
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE-------ALTMRQ 70
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-KFGPFPEAVMRTYTKQLLLGLEY 186
HP+IV+ +G + E + I++E G + S L + A + Y QL L Y
Sbjct: 71 FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 129
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + +HRDI N+LV + C+KL DFG S+ + E +T A K WMAPE I
Sbjct: 130 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 188
Query: 247 QTGHSYSADIWSVGCTVIE--MATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ ++D+W G + E M KP + +V G P+P N
Sbjct: 189 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPMPPNCPPTLY 245
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ KC +P RP +EL
Sbjct: 246 SLMTKCWAYDPSRRPRFTEL 265
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 71 GELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
G IG G FG V+ G+ + + +A+K + + +EK
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE-------ALTMRQ 67
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-KFGPFPEAVMRTYTKQLLLGLEY 186
HP+IV+ +G + E + I++E G + S L + A + Y QL L Y
Sbjct: 68 FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + +HRDI N+LV + C+KL DFG S+ + E +T A K WMAPE I
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 185
Query: 247 QTGHSYSADIWSVGCTVIE--MATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ ++D+W G + E M KP + +V G P+P N
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPMPPNCPPTLY 242
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ KC +P RP +EL
Sbjct: 243 SLMTKCWAYDPSRRPRFTEL 262
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
+++G G FG V G + L S + ++V + + K++ +D + H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DH 105
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+R G V + + + I+ E++ GS+ S L K F + + + G++YL +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
G +HRD+ NIL+++ K++DFG ++ + A T G ++ W +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR----WTSPEA 221
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAA 278
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
++K +++ GAFG VY G+ + GE + + + A+ KA I
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 81
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-FPEAVMRTYTKQLLLGLEY 186
+P++ R LG ++ ++ + +P G + + + + + Q+ G+ Y
Sbjct: 82 -DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + ++HRD+ N+LV +K+ DFG +K + A+ K WMA E I
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 247 QTGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+++ +D+WS G TV E+ T KP E++++ G PPI ++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 256
Query: 305 DFLLKCLEKEPDLRPTASELL 325
++KC + D RP EL+
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 69 RKGELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
R E +G G+FG V G + SG+ ++V + + S+ +A D
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 78
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEY 186
H N++R G V + ++ E P GS+ L K G F + Y Q+ G+ Y
Sbjct: 79 -DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-WMAPEVI 245
L + +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE +
Sbjct: 137 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
Query: 246 RQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ S+++D W G T+ EM T G+ PW L I P PE+
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDIY 255
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ +++C +P+ RPT L
Sbjct: 256 NVMVQCWAHKPEDRPTFVAL 275
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 71 GELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
G IG G FG V+ G+ + + +A+K + + +EK
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE-------ALTMRQ 69
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-KFGPFPEAVMRTYTKQLLLGLEY 186
HP+IV+ +G + E + I++E G + S L + A + Y QL L Y
Sbjct: 70 FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 128
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + +HRDI N+LV + C+KL DFG S+ + E +T A K WMAPE I
Sbjct: 129 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 187
Query: 247 QTGHSYSADIWSVGCTVIE--MATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ ++D+W G + E M KP + +V G P+P N
Sbjct: 188 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPMPPNCPPTLY 244
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ KC +P RP +EL
Sbjct: 245 SLMTKCWAYDPSRRPRFTEL 264
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 71 GELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
G IG G FG V+ G+ + + +A+K + + +EK
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE-------ALTMRQ 72
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-KFGPFPEAVMRTYTKQLLLGLEY 186
HP+IV+ +G + E + I++E G + S L + A + Y QL L Y
Sbjct: 73 FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 131
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + +HRDI N+LV + C+KL DFG S+ + E +T A K WMAPE I
Sbjct: 132 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 190
Query: 247 QTGHSYSADIWSVGCTVIE--MATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ ++D+W G + E M KP + +V G P+P N
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPMPPNCPPTLY 247
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ KC +P RP +EL
Sbjct: 248 SLMTKCWAYDPSRRPRFTEL 267
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 71 GELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
G IG G FG V+ G+ + + +A+K + + +EK
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE-------ALTMRQ 95
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-KFGPFPEAVMRTYTKQLLLGLEY 186
HP+IV+ +G + E + I++E G + S L + A + Y QL L Y
Sbjct: 96 FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 154
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + +HRDI N+LV + C+KL DFG S+ + E +T A K WMAPE I
Sbjct: 155 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 213
Query: 247 QTGHSYSADIWSVGCTVIE--MATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ ++D+W G + E M KP + +V G P+P N
Sbjct: 214 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPMPPNCPPTLY 270
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ KC +P RP +EL
Sbjct: 271 SLMTKCWAYDPSRRPRFTEL 290
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 71 GELIGCGAFGRVYMGMNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
G IG G FG V+ G+ + + +A+K + + +EK
Sbjct: 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE-------ALTMRQ 64
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-KFGPFPEAVMRTYTKQLLLGLEY 186
HP+IV+ +G + E + I++E G + S L + A + Y QL L Y
Sbjct: 65 FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 123
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + +HRDI N+LV + C+KL DFG S+ + E +T A K WMAPE I
Sbjct: 124 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESIN 182
Query: 247 QTGHSYSADIWSVGCTVIE--MATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ ++D+W G + E M KP + +V G P+P N
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPMPPNCPPTLY 239
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ KC +P RP +EL
Sbjct: 240 SLMTKCWAYDPSRRPRFTEL 259
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 69 RKGELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
R E +G G+FG V G + SG+ ++V + + S+ +A D
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 68
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEY 186
H N++R G V + ++ E P GS+ L K G F + Y Q+ G+ Y
Sbjct: 69 -DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-WMAPEVI 245
L + +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE +
Sbjct: 127 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 246 RQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ S+++D W G T+ EM T G+ PW L I P PE+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDIY 245
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ +++C +P+ RPT L
Sbjct: 246 NVMVQCWAHKPEDRPTFVAL 265
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 69 RKGELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
R E +G G+FG V G + SG+ ++V + + S+ +A D
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 78
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEY 186
H N++R G V + ++ E P GS+ L K G F + Y Q+ G+ Y
Sbjct: 79 -DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-WMAPEVI 245
L + +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE +
Sbjct: 137 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
Query: 246 RQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ S+++D W G T+ EM T G+ PW L I P PE+
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDIY 255
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ +++C +P+ RPT L
Sbjct: 256 NVMVQCWAHKPEDRPTFVAL 275
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
+++G G FG V G + L S + ++V + + K++ +D + H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DH 105
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+R G V + + + I+ E++ GS+ S L K F + + + G++YL +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
G +HRD+ NIL+++ K++DFG + + A T G ++ W +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR----WTSPEA 221
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAA 278
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 69 RKGELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
R E +G G+FG V G + SG+ ++V + + S+ +A D
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 68
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEY 186
H N++R G V + ++ E P GS+ L K G F + Y Q+ G+ Y
Sbjct: 69 -DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-WMAPEVI 245
L + +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE +
Sbjct: 127 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 246 RQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ S+++D W G T+ EM T G+ PW L I P PE+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDIY 245
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ +++C +P+ RPT L
Sbjct: 246 NVMVQCWAHKPEDRPTFVAL 265
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 147/310 (47%), Gaps = 56/310 (18%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R+ + +GCG G V+ ++ D + +A+K++++ + K ++
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALRE--------IKIIR 63
Query: 127 XXSHPNIVRY--------------LGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV 172
H NIV+ +G++ E S+ I+ E++ ++++L + GP E
Sbjct: 64 RLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQ-GPLLEEH 121
Query: 173 MRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCI-KLADFGASKQVAELATVSGAK 231
R + QLL GL+Y+H+ ++HRD+K AN+ ++ + + K+ DFG ++ + + G
Sbjct: 122 ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHL 181
Query: 232 SMKG--TPYWMAPEVIRQ-TGHSYSADIWSVGCTVIEMATGKPPWS-------------- 274
S +G T ++ +P ++ ++ + D+W+ GC EM TGK ++
Sbjct: 182 S-EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240
Query: 275 ------QQYQEVAALFHI----GTTKSHPPIPENL---SVKAKDFLLKCLEKEPDLRPTA 321
+ QE+ ++ + T+ H P+ + L S +A DFL + L P R TA
Sbjct: 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTA 300
Query: 322 SELLKHPFVT 331
E L HP+++
Sbjct: 301 EEALSHPYMS 310
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 26/277 (9%)
Query: 71 GELIGCGAFGRVYM----GMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
G+ +G GAFG+V M G++ D + V + + A+++ D +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG- 98
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPEAVMR- 174
H NI+ LG ++ L +++E+ G++ L P PE M
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 175 ----TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
+ T QL G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTT 289
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKE 274
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P N + + + C P RPT +L++
Sbjct: 275 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 124/256 (48%), Gaps = 17/256 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G+FG+V + + +G+ +A+K +I +K Q I HP+I
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALK--IINKKVLAKSDMQGRIEREISYLRLL---RHPHI 75
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
++ ++ ++ + +++E+ G + + + E R + +Q++ +EY H H I+
Sbjct: 76 IKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 134
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
HRD+K N+L+D +K+ADFG S + + + K+ G+P + APEVI +G Y+
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTSCGSPNYAAPEVI--SGKLYA 189
Query: 254 ---ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKC 310
D+WS G + M + P+ + + LF + +P+ LS A + +
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFK-NISNGVYTLPKFLSPGAAGLIKRM 246
Query: 311 LEKEPDLRPTASELLK 326
L P R + E+++
Sbjct: 247 LIVNPLNRISIHEIMQ 262
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 124/256 (48%), Gaps = 17/256 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G+FG+V + + +G+ +A+K +I +K Q I HP+I
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALK--IINKKVLAKSDMQGRIEREISYLRLL---RHPHI 76
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
++ ++ ++ + +++E+ G + + + E R + +Q++ +EY H H I+
Sbjct: 77 IKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 135
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
HRD+K N+L+D +K+ADFG S + + + K+ G+P + APEVI +G Y+
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTSCGSPNYAAPEVI--SGKLYA 190
Query: 254 ---ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKC 310
D+WS G + M + P+ + + LF + +P+ LS A + +
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFK-NISNGVYTLPKFLSPGAAGLIKRM 247
Query: 311 LEKEPDLRPTASELLK 326
L P R + E+++
Sbjct: 248 LIVNPLNRISIHEIMQ 263
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 124/256 (48%), Gaps = 17/256 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G+FG+V + + +G+ +A+K +I +K Q I HP+I
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALK--IINKKVLAKSDMQGRIEREISYLRLL---RHPHI 66
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
++ ++ ++ + +++E+ G + + + E R + +Q++ +EY H H I+
Sbjct: 67 IKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 125
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
HRD+K N+L+D +K+ADFG S + + + K+ G+P + APEVI +G Y+
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTSCGSPNYAAPEVI--SGKLYA 180
Query: 254 ---ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKC 310
D+WS G + M + P+ + + LF + +P+ LS A + +
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFK-NISNGVYTLPKFLSPGAAGLIKRM 237
Query: 311 LEKEPDLRPTASELLK 326
L P R + E+++
Sbjct: 238 LIVNPLNRISIHEIMQ 253
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 69 RKGELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
R E +G G+FG V G + SG+ ++V + + S+ +A D
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 72
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEY 186
H N++R G V + ++ E P GS+ L K G F + Y Q+ G+ Y
Sbjct: 73 -DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-WMAPEVI 245
L + +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE +
Sbjct: 131 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 246 RQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ S+++D W G T+ EM T G+ PW L I P PE+
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDIY 249
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ +++C +P+ RPT L
Sbjct: 250 NVMVQCWAHKPEDRPTFVAL 269
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 13/260 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
++IG G FG V G +L +++ +A + HP
Sbjct: 39 QVIGAGEFGEVCSG----HLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 94
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHNH 190
N++ G V + + I+ EF+ GS+ S L + G F + + + G++YL +
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 154
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELA---TVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ NILV++ K++DFG S+ + + T + A K W APE I+
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 248 TGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ ++D+WS G + E M+ G +P W Q+V + I PP P +
Sbjct: 215 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV--INAIEQDYRLPP-PMDCPSALHQ 271
Query: 306 FLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 272 LMLDCWQKDRNHRPKFGQIV 291
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 26/277 (9%)
Query: 71 GELIGCGAFGRVYM----GMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
G+ +G GAFG+V M G++ D + V + + A+++ D +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG- 98
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPEAVMR- 174
H NI+ LG ++ L +++E+ G++ L P PE M
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF 156
Query: 175 ----TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
+ T QL G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTT 289
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKE 274
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P N + + + C P RPT +L++
Sbjct: 275 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
+++G G FG V G + L S + ++V + + K++ +D + H
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DH 76
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+R G V + + + I+ E + GS+ S L K F + + + G++YL +
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
G +HRD+ NIL+++ K++DFG S+ + A T G ++ W +PE
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTSPEA 192
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAA 249
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 250 LYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
+++G G FG V G + L S + ++V + + K++ +D + H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DH 105
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+R G V + + + I+ E + GS+ S L K F + + + G++YL +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
G +HRD+ NIL+++ K++DFG S+ + A T G ++ W +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTSPEA 221
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAA 278
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
++IG G FG V G + + + V + A + K++ +D + H
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASIMGQF----DH 89
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+ G V + + + I+ E++ GS+ + L K G F + + + G++YL +
Sbjct: 90 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 149
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
+HRD+ NILV++ K++DFG S+ + A T G ++ W APE
Sbjct: 150 MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR----WTAPEA 205
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P + +
Sbjct: 206 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY---RLPPPMDCPIA 262
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +KE RP +++
Sbjct: 263 LHQLMLDCWQKERSDRPKFGQIV 285
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 26/277 (9%)
Query: 71 GELIGCGAFGRVYM----GMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
G+ +G GAFG+V M G++ D + V + + A+++ D +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG- 98
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPEAVMR- 174
H NI+ LG ++ L +++E+ G++ L P PE M
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 175 ----TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
+ T QL G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTT 289
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKE 274
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P N + + + C P RPT +L++
Sbjct: 275 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 124/256 (48%), Gaps = 17/256 (6%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G+FG+V + + +G+ +A+K +I +K Q I HP+I
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALK--IINKKVLAKSDMQGRIEREISYLRLL---RHPHI 70
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIM 193
++ ++ ++ + +++E+ G + + + E R + +Q++ +EY H H I+
Sbjct: 71 IKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 129
Query: 194 HRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYS 253
HRD+K N+L+D +K+ADFG S + + + K+ G+P + APEVI +G Y+
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTSCGSPNYAAPEVI--SGKLYA 184
Query: 254 ---ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKC 310
D+WS G + M + P+ + + LF + +P+ LS A + +
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFK-NISNGVYTLPKFLSPGAAGLIKRM 241
Query: 311 LEKEPDLRPTASELLK 326
L P R + E+++
Sbjct: 242 LIVNPLNRISIHEIMQ 257
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 69 RKGELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
R E +G G+FG V G + SG+ ++V + + S+ +A D
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 68
Query: 128 XSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEY 186
H N++R G V + ++ E P GS+ L K G F + Y Q+ G+ Y
Sbjct: 69 -DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-WMAPEVI 245
L + +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE +
Sbjct: 127 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 246 RQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAK 304
+ S+++D W G T+ EM T G+ PW L I P PE+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDIY 245
Query: 305 DFLLKCLEKEPDLRPTASEL 324
+ +++C +P+ RPT L
Sbjct: 246 NVMVQCWAHKPEDRPTFVAL 265
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 21/268 (7%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+++G G FG V G NL + ++K + +Q I SH
Sbjct: 39 GKILGEGEFGSVMEG-NLKQEDGTSLK--VAVKTMKLDNSSQREIEEFLSEAACMKDFSH 95
Query: 131 PNIVRYLGTVREEESLNI-----LLEFVPGGSISSLLG----KFGP--FPEAVMRTYTKQ 179
PN++R LG E S I +L F+ G + + L + GP P + +
Sbjct: 96 PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVD 155
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+ LG+EYL N +HRD+ N ++ + + +ADFG SK++ + K W
Sbjct: 156 IALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 240 MAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPW--SQQYQEVAALFHIGTTKSHPPIP 296
+A E + ++ +D+W+ G T+ E+AT G P+ Q ++ L H K P
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQ----P 271
Query: 297 ENLSVKAKDFLLKCLEKEPDLRPTASEL 324
E+ + + + C +P RPT S L
Sbjct: 272 EDCLDELYEIMYSCWRTDPLDRPTFSVL 299
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 21/224 (9%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEA--------VMRTYTKQL 180
S P ++ + ++LE+ GG I SL PE V+R KQ+
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLC-----LPELAEMVSENDVIRL-IKQI 140
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDN---KGCIKLADFGASKQVAELATVSGAKSMKGTP 237
L G+ YLH + I+H D+K NIL+ + G IK+ DFG S+++ + + + GTP
Sbjct: 141 LEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL---REIMGTP 197
Query: 238 YWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPW-SQQYQEVAALFHIGTTKSHPPIP 296
++APE++ + + D+W++G + T P+ + QE
Sbjct: 198 EYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETF 257
Query: 297 ENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPVLH 340
++S A DF+ L K P+ RPTA L H ++ D + + H
Sbjct: 258 SSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFH 301
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
+++G G FG V G + L S + ++V + + K++ +D + H
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF----DH 105
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+R G V + + + I+ E + GS+ S L K F + + + G++YL +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
G +HRD+ NIL+++ K++DFG S+ + A T G ++ W +PE
Sbjct: 166 MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTSPEA 221
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P +
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAA 278
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 26/277 (9%)
Query: 71 GELIGCGAFGRVYM----GMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
G+ +G GAFG+V M G++ D + V + + A+++ D +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG- 98
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPEAVMR- 174
H NI+ LG ++ L +++E+ G++ L P PE M
Sbjct: 99 --KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 175 ----TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
+ T QL G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTT 289
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKE 274
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P N + + + C P RPT +L++
Sbjct: 275 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
++IG G FG V G + + + V + A + K++ +D + H
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASIMGQF----DH 74
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+ G V + + + I+ E++ GS+ + L K G F + + + G++YL +
Sbjct: 75 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 134
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
+HRD+ NILV++ K++DFG S+ + A T G ++ W APE
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR----WTAPEA 190
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P + +
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY---RLPPPMDCPIA 247
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +KE RP +++
Sbjct: 248 LHQLMLDCWQKERSDRPKFGQIV 270
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 21/263 (7%)
Query: 72 ELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
++IG G FG V G + + + V + A + K++ +D + H
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASIMGQF----DH 68
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHN 189
PNI+ G V + + + I+ E++ GS+ + L K G F + + + G++YL +
Sbjct: 69 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 128
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPEV 244
+HRD+ NILV++ K++DFG S+ + A T G ++ W APE
Sbjct: 129 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR----WTAPEA 184
Query: 245 IRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVK 302
I + ++D+WS G + E M+ G +P W Q+V G P P + +
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY---RLPPPMDCPIA 241
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+L C +KE RP +++
Sbjct: 242 LHQLMLDCWQKERSDRPKFGQIV 264
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 133 IVRYLGTVREEESLNILLEF-VPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
++R L +S ++LE P + + + G E + R++ Q+L + + HN G
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 192 IMHRDIKGANILVD-NKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR-QTG 249
++HRDIK NIL+D N+G +KL DFG+ + + GT + PE IR
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEWIRYHRY 233
Query: 250 HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLK 309
H SA +WS+G + +M G P+ + + + +S + + +
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVFFRQRVSSECQHLIRW 284
Query: 310 CLEKEPDLRPTASELLKHPFV 330
CL P RPT E+ HP++
Sbjct: 285 CLALRPSDRPTFEEIQNHPWM 305
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 26/277 (9%)
Query: 71 GELIGCGAFGRVYM----GMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
G+ +G GAFG+V M G++ D + V + + A+++ D +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG- 98
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPEAVMR- 174
H NI+ LG ++ L +++E+ G++ L P PE M
Sbjct: 99 --KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 175 ----TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
+ T QL G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTT 289
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKE 274
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P N + + + C P RPT +L++
Sbjct: 275 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
Query: 169 PEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS 228
P A+ YT Q++ GLE+LH I++RD+K N+L+D+ G ++++D G + ++ A +
Sbjct: 289 PRAIF--YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQT 344
Query: 229 GAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA-ALFHIG 287
K GTP +MAPE++ + +S D +++G T+ EM + P+ + ++V
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 288 TTKSHPPIPENLSVKAKDFLLKCLEKEPDLR 318
+ P+ S +KDF L+K+P+ R
Sbjct: 405 VLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
Query: 169 PEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS 228
P A+ YT Q++ GLE+LH I++RD+K N+L+D+ G ++++D G + ++ A +
Sbjct: 289 PRAIF--YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQT 344
Query: 229 GAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA-ALFHIG 287
K GTP +MAPE++ + +S D +++G T+ EM + P+ + ++V
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 288 TTKSHPPIPENLSVKAKDFLLKCLEKEPDLR 318
+ P+ S +KDF L+K+P+ R
Sbjct: 405 VLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
Query: 169 PEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS 228
P A+ YT Q++ GLE+LH I++RD+K N+L+D+ G ++++D G + ++ A +
Sbjct: 289 PRAIF--YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQT 344
Query: 229 GAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA-ALFHIG 287
K GTP +MAPE++ + +S D +++G T+ EM + P+ + ++V
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 288 TTKSHPPIPENLSVKAKDFLLKCLEKEPDLR 318
+ P+ S +KDF L+K+P+ R
Sbjct: 405 VLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE-AVMRTYTKQLLLGLEYL 187
SHP +V++ G +E + I+ E++ G + + L G E + + + G+ +L
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL 120
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEV 244
+H +HRD+ N LVD C+K++DFG ++ V + VS GT + W APEV
Sbjct: 121 ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV----GTKFPVKWSAPEV 176
Query: 245 IRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPI-PENLSVK 302
+S +D+W+ G + E+ + GK P+ L ++ H P S
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL---KVSQGHRLYRPHLASDT 233
Query: 303 AKDFLLKCLEKEPDLRPTASELL 325
+ C + P+ RPT +LL
Sbjct: 234 IYQIMYSCWHELPEKRPTFQQLL 256
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
Query: 169 PEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS 228
P A+ YT Q++ GLE+LH I++RD+K N+L+D+ G ++++D G + ++ A +
Sbjct: 289 PRAIF--YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQT 344
Query: 229 GAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA-ALFHIG 287
K GTP +MAPE++ + +S D +++G T+ EM + P+ + ++V
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 288 TTKSHPPIPENLSVKAKDFLLKCLEKEPDLR 318
+ P+ S +KDF L+K+P+ R
Sbjct: 405 VLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 26/277 (9%)
Query: 71 GELIGCGAFGRVYM----GMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
G+ +G G FG+V M G++ D + V + + A+++ D +
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG- 144
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPEAVMR- 174
H NI+ LG ++ L +++E+ G++ L P PE M
Sbjct: 145 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 175 ----TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
+ T QL G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 203 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTT 289
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF +
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKE 320
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P N + + + C P RPT +L++
Sbjct: 321 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 130 HPNIVRYLGTVREEES--LNILLEFVPGGSISSLLGKF--GPFPEAVMRTYTKQLLLGLE 185
H N+++ + + EE + +++E+ G + +L FP Y QL+ GLE
Sbjct: 65 HKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLE 123
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
YLH+ GI+H+DIK N+L+ G +K++ G ++ + A ++ +G+P + PE+
Sbjct: 124 YLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIA 183
Query: 246 R--QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALF-HIGTTKSHPPIPENLSVK 302
T + DIWS G T+ + TG P+ + LF +IG K IP +
Sbjct: 184 NGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG--DNIYKLFENIG--KGSYAIPGDCGPP 239
Query: 303 AKDFLLKCLEKEPDLRPTASELLKH 327
D L LE EP R + ++ +H
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQH 264
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 26/277 (9%)
Query: 71 GELIGCGAFGRVYM----GMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
G+ +G GAFG+V M G++ D + V + + A+++ D +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG- 98
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPEAVMR- 174
H NI+ LG ++ L +++E+ G++ L P PE M
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 175 ----TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
+ T QL G+EYL + +HRD+ N+LV +++ADFG ++ + +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTT 289
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKE 274
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P N + + + C P RPT +L++
Sbjct: 275 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 10/260 (3%)
Query: 69 RKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
RK +++G GAFG VY G+ + GE + + + + KA I
Sbjct: 20 RKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV--- 76
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSI-SSLLGKFGPFPEAVMRTYTKQLLLGLEYL 187
P + R LG ++ ++ + +P G + + G + + Q+ G+ YL
Sbjct: 77 GSPYVSRLLGICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYL 135
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
+ ++HRD+ N+LV + +K+ DFG ++ + T A K WMA E I +
Sbjct: 136 EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILR 195
Query: 248 TGHSYSADIWSVGCTVIEMAT--GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
++ +D+WS G TV E+ T KP +E+ L G PPI ++
Sbjct: 196 RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPI---CTIDVYM 252
Query: 306 FLLKCLEKEPDLRPTASELL 325
++KC + + RP EL+
Sbjct: 253 IMVKCWMIDSECRPRFRELV 272
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 23/253 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+M + +AVK + + A+ ++ H +
Sbjct: 196 LGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL---------QHDKL 245
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V +E + I+ EF+ GS+ L G P P+ + ++ Q+ G+ ++
Sbjct: 246 VK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI--DFSAQIAEGMAFIEQ 302
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
+HRD++ ANILV K+ADFG ++ V E + + K W APE I
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGS 361
Query: 250 HSYSADIWSVGCTVIEMAT-GKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+ +D+WS G ++E+ T G+ P+ EV G P PEN + + +
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY---RMPRPENCPEELYNIM 418
Query: 308 LKCLEKEPDLRPT 320
++C + P+ RPT
Sbjct: 419 MRCWKNRPEERPT 431
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 26/277 (9%)
Query: 71 GELIGCGAFGRVYM----GMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
G+ +G G FG+V M G++ D + V + + A+++ D +
Sbjct: 27 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG- 85
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPEAVMR- 174
H NI+ LG ++ L +++E+ G++ L P PE M
Sbjct: 86 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 143
Query: 175 ----TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
+ T QL G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 144 KDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTT 289
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF +
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKE 261
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P N + + + C P RPT +L++
Sbjct: 262 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 298
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 124/286 (43%), Gaps = 28/286 (9%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA--QDHIXXXXXX 121
P R + G+ +G GAFG+V + D+ + A KE A +H
Sbjct: 27 PRDRLKLGKPLGRGAFGQV---IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 83
Query: 122 XXXXXXXSHPNIVRYLGTVREEES-LNILLEFVPGGSISSLL----GKFGPFPEA----- 171
H N+V LG + L +++EF G++S+ L +F P+ EA
Sbjct: 84 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLY 143
Query: 172 -------VMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAEL 224
+ Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + +
Sbjct: 144 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 203
Query: 225 ATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVA 281
+ WMAPE I ++ +D+WS G + E+ + G P+ + +E
Sbjct: 204 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 263
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
GT P+ + + +L C EP RPT SEL++H
Sbjct: 264 RRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 26/277 (9%)
Query: 71 GELIGCGAFGRVYM----GMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
G+ +G G FG+V M G++ D + V + + A+++ D +
Sbjct: 29 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG- 87
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPEAVMR- 174
H NI+ LG ++ L +++E+ G++ L P PE M
Sbjct: 88 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 145
Query: 175 ----TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
+ T QL G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 146 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTT 289
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF +
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKE 263
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P N + + + C P RPT +L++
Sbjct: 264 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 300
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 136/310 (43%), Gaps = 57/310 (18%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R+++ + IG GA G V + G +AVK++ + + Q H
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKL------SRPFQNQTHAKRAYRELVLLK 76
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 77 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELD---HERMSYLLYQM 133
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWM 240
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG ++ +T T Y+
Sbjct: 134 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---STNFMMTPYVVTRYYR 190
Query: 241 APEVIRQTGHSYSADIWSVGCTVIEMATGK---------PPWSQQYQEV--------AAL 283
APEVI G+ + DIWSVGC + E+ G W++ +++ AAL
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAAL 250
Query: 284 F-----HIGTTKSHPPIP-ENL----------------SVKAKDFLLKCLEKEPDLRPTA 321
++ ++P I E L + +A+D L K L +PD R +
Sbjct: 251 QPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISV 310
Query: 322 SELLKHPFVT 331
E L+HP++T
Sbjct: 311 DEALRHPYIT 320
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 26/277 (9%)
Query: 71 GELIGCGAFGRVYM----GMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
G+ +G G FG+V M G++ D + V + + A+++ D +
Sbjct: 32 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG- 90
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPEAVMR- 174
H NI+ LG ++ L +++E+ G++ L P PE M
Sbjct: 91 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 148
Query: 175 ----TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
+ T QL G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 149 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTT 289
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF +
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKE 266
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P N + + + C P RPT +L++
Sbjct: 267 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 303
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 33/266 (12%)
Query: 74 IGCGAFGRVYMG--MNL---DSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG+V++ NL L+AVK + A++ A K+ ++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHRE--------AELLTNL 72
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-------------FPEAVMRT 175
H +IV++ G E + L ++ E++ G ++ L GP ++ M
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG 235
+Q+ G+ YL + +HRD+ N LV +K+ DFG S+ V
Sbjct: 133 IAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 236 TPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQ-QYQEVAALFHIGTTKSHP 293
WM PE I + +D+WS+G + E+ T GK PW Q EV G P
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRP 252
Query: 294 -PIPENLSVKAKDFLLKCLEKEPDLR 318
P+ + + +L C ++EP +R
Sbjct: 253 RTCPQ----EVYELMLGCWQREPHMR 274
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 73 LIGCGAFGRVYMGMNLD-SGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
++G G FG VY G+ + GE ++ +A K+ D+ HP
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGE-----KINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 85
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGK-FGPFPEAVMRTYTKQLLLGLEYLHNH 190
+IV+ +G + EEE I++E P G + L + + Y+ Q+ + YL +
Sbjct: 86 HIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 144
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGH 250
+HRDI NILV + C+KL DFG S+ + + A + WM+PE I
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESINFRRF 203
Query: 251 SYSADIWSVGCTVIE-MATGKPP--WSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+ ++D+W + E ++ GK P W + ++V + G P P+ +
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKG---DRLPKPDLCPPVLYTLM 259
Query: 308 LKCLEKEPDLRPTASELL 325
+C + +P RP +EL+
Sbjct: 260 TRCWDYDPSDRPRFTELV 277
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 73 LIGCGAFGRVYMGMNLD-SGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
++G G FG VY G+ + GE ++ +A K+ D+ HP
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGE-----KINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 69
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGK-FGPFPEAVMRTYTKQLLLGLEYLHNH 190
+IV+ +G + EEE I++E P G + L + + Y+ Q+ + YL +
Sbjct: 70 HIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 128
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGH 250
+HRDI NILV + C+KL DFG S+ + + A + WM+PE I
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESINFRRF 187
Query: 251 SYSADIWSVGCTVIE-MATGKPP--WSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+ ++D+W + E ++ GK P W + ++V + G P P+ +
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKG---DRLPKPDLCPPVLYTLM 243
Query: 308 LKCLEKEPDLRPTASELL 325
+C + +P RP +EL+
Sbjct: 244 TRCWDYDPSDRPRFTELV 261
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 23/253 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+M + +AVK + + A+ ++ H +
Sbjct: 23 LGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL---------QHDKL 72
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V +E + I+ EF+ GS+ L G P P+ + ++ Q+ G+ ++
Sbjct: 73 VK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI--DFSAQIAEGMAFIEQ 129
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
+HRD++ ANILV K+ADFG ++ V E + + K W APE I
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGS 188
Query: 250 HSYSADIWSVGCTVIEMAT-GKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+ +D+WS G ++E+ T G+ P+ EV G P PEN + + +
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY---RMPRPENCPEELYNIM 245
Query: 308 LKCLEKEPDLRPT 320
++C + P+ RPT
Sbjct: 246 MRCWKNRPEERPT 258
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 26/238 (10%)
Query: 57 SPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIX 116
SPS+ W E +G G FG V ++ D+GE +A+KQ + ++E+ I
Sbjct: 6 SPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQ 65
Query: 117 XXXXXXXXXXXXSHPNIV--RYLGTVREEESLNIL----LEFVPGGSISSLLGKF---GP 167
+HPN+V R + ++ + N L +E+ GG + L +F
Sbjct: 66 IMKKL-------NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG 118
Query: 168 FPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVD---NKGCIKLADFGASKQV--A 222
E +RT + L YLH + I+HRD+K NI++ + K+ D G +K++
Sbjct: 119 LKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG 178
Query: 223 ELATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEV 280
EL T GT ++APE++ Q ++ + D WS G E TG P+ +Q V
Sbjct: 179 ELCT-----EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV 231
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 26/238 (10%)
Query: 57 SPSVKMSPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIX 116
SPS+ W E +G G FG V ++ D+GE +A+KQ + ++E+ I
Sbjct: 5 SPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQ 64
Query: 117 XXXXXXXXXXXXSHPNIV--RYLGTVREEESLNIL----LEFVPGGSISSLLGKF---GP 167
+HPN+V R + ++ + N L +E+ GG + L +F
Sbjct: 65 IMKKL-------NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG 117
Query: 168 FPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVD---NKGCIKLADFGASKQV--A 222
E +RT + L YLH + I+HRD+K NI++ + K+ D G +K++
Sbjct: 118 LKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG 177
Query: 223 ELATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEV 280
EL T GT ++APE++ Q ++ + D WS G E TG P+ +Q V
Sbjct: 178 ELCT-----EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV 230
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 126/303 (41%), Gaps = 60/303 (19%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQV-------LIAANFASKEKAQDHIXXXXX 120
+R + +G GA+G V ++ +G +A+K++ L A + + H+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM----- 81
Query: 121 XXXXXXXXSHPNIVRYLGTVREEESLNILLEF-----VPGGSISSLLGKFGPFPEAVMRT 175
H N++ L +E+L+ +F G + L+ K E ++
Sbjct: 82 --------RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM-KHEKLGEDRIQF 132
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG 235
Q+L GL Y+H GI+HRD+K N+ V+ +K+ DFG ++Q S
Sbjct: 133 LVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD-----SEMXGXVV 187
Query: 236 TPYWMAPEVIRQ-TGHSYSADIWSVGCTVIEMATGKPPW--SQQYQEVAALFHIGTT--- 289
T ++ APEVI ++ + DIWSVGC + EM TGK + S ++ + + T
Sbjct: 188 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPA 247
Query: 290 -----------------------KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
K I N S A + L K L + + R TA E L
Sbjct: 248 EFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307
Query: 327 HPF 329
HP+
Sbjct: 308 HPY 310
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 135/310 (43%), Gaps = 57/310 (18%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R+++ + IG GA G V + G +AVK++ + + Q H
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKL------SRPFQNQTHAKRAYRELVLLK 78
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELD---HERMSYLLYQM 135
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWM 240
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG ++ T T Y+
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---CTNFMMTPYVVTRYYR 192
Query: 241 APEVIRQTGHSYSADIWSVGCTVIEMATG---------KPPWSQQYQEV--------AAL 283
APEVI G++ + DIWSVGC + E+ G W++ +++ AAL
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAAL 252
Query: 284 F-----HIGTTKSHPPIP-ENL----------------SVKAKDFLLKCLEKEPDLRPTA 321
++ +P I E L + +A+D L K L +PD R +
Sbjct: 253 QPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISV 312
Query: 322 SELLKHPFVT 331
E L+HP++T
Sbjct: 313 DEALRHPYIT 322
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 23/260 (8%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G FG V++G L+ ++ A+K + A +D I SHP +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAM-----SEEDFIEEAEVMMKL----SHPKL 64
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL-GKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
V+ G E+ + ++ EF+ G +S L + G F + + G+ YL +
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASV 124
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQTG 249
+HRD+ N LV IK++DFG ++ V + S GT + W +PEV +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD----DQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 250 HSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+S +D+WS G + E+ + GK P+ + EV G P + S +
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIM 237
Query: 308 LKCLEKEPDLRPTASELLKH 327
C ++ P+ RP S LL+
Sbjct: 238 NHCWKERPEDRPAFSRLLRQ 257
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 26/284 (9%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA--QDHIXXXXXX 121
P R + G+ +G GAFG+V + D+ + A KE A +H
Sbjct: 27 PRDRLKLGKPLGRGAFGQV---IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSEL 83
Query: 122 XXXXXXXSHPNIVRYLGTVREEES-LNILLEFVPGGSISSLL----GKFGPF-PEAVMR- 174
H N+V LG + L +++EF G++S+ L +F P+ PE + +
Sbjct: 84 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKD 143
Query: 175 --------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELAT 226
Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + +
Sbjct: 144 FLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 227 VSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVAAL 283
+ WMAPE I ++ +D+WS G + E+ + G P+ + +E
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 263
Query: 284 FHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
GT P+ + + +L C EP RPT SEL++H
Sbjct: 264 LKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 28/286 (9%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA--QDHIXXXXXX 121
P R + G+ +G GAFG+V + D+ + A KE A +H
Sbjct: 25 PRDRLKLGKPLGRGAFGQV---IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 81
Query: 122 XXXXXXXSHPNIVRYLGTVREEES-LNILLEFVPGGSISSLL----GKFGPF---PEAVM 173
H N+V LG + L +++EF G++S+ L +F P+ PE +
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 174 R---------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAEL 224
+ Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 225 ATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVA 281
+ WMAPE I ++ +D+WS G + E+ + G P+ + +E
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 261
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
GT P+ + + +L C EP RPT SEL++H
Sbjct: 262 RRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 73 LIGCGAFGRVYMGMNLD-SGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
++G G FG VY G+ + GE ++ +A K+ D+ HP
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGE-----KINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 73
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGK-FGPFPEAVMRTYTKQLLLGLEYLHNH 190
+IV+ +G + EEE I++E P G + L + + Y+ Q+ + YL +
Sbjct: 74 HIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGH 250
+HRDI NILV + C+KL DFG S+ + + A + WM+PE I
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESINFRRF 191
Query: 251 SYSADIWSVGCTVIE-MATGKPP--WSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+ ++D+W + E ++ GK P W + ++V + G P P+ +
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKG---DRLPKPDLCPPVLYTLM 247
Query: 308 LKCLEKEPDLRPTASELL 325
+C + +P RP +EL+
Sbjct: 248 TRCWDYDPSDRPRFTELV 265
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 26/277 (9%)
Query: 71 GELIGCGAFGRVYM----GMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
G+ +G GAFG+V M G++ D + V + + A+++ D +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG- 98
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPEAVMR- 174
H NI+ LG ++ L +++ + G++ L P PE M
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 175 ----TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
+ T QL G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTT 289
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKE 274
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P N + + + C P RPT +L++
Sbjct: 275 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 28/286 (9%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA--QDHIXXXXXX 121
P R + G+ +G GAFG+V + D+ + A KE A +H
Sbjct: 25 PRDRLKLGKPLGRGAFGQV---IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 81
Query: 122 XXXXXXXSHPNIVRYLGTVREEES-LNILLEFVPGGSISSLL----GKFGPF---PEAVM 173
H N+V LG + L +++EF G++S+ L +F P+ PE +
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 174 R---------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAEL 224
+ Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 225 ATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVA 281
+ WMAPE I ++ +D+WS G + E+ + G P+ + +E
Sbjct: 202 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 261
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
GT P+ + + +L C EP RPT SEL++H
Sbjct: 262 RRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 23/260 (8%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G FG V++G L+ ++ A+K + A +D I SHP +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAM-----SEEDFIEEAEVMMKL----SHPKL 64
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL-GKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
V+ G E+ + ++ EF+ G +S L + G F + + G+ YL +
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 124
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQTG 249
+HRD+ N LV IK++DFG ++ V + S GT + W +PEV +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD----DQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 250 HSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+S +D+WS G + E+ + GK P+ + EV G P + S +
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIM 237
Query: 308 LKCLEKEPDLRPTASELLKH 327
C ++ P+ RP S LL+
Sbjct: 238 NHCWKERPEDRPAFSRLLRQ 257
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 28/286 (9%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA--QDHIXXXXXX 121
P R + G+ +G GAFG+V + D+ + A KE A +H
Sbjct: 25 PRDRLKLGKPLGRGAFGQV---IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 81
Query: 122 XXXXXXXSHPNIVRYLGTVREEES-LNILLEFVPGGSISSLL----GKFGPF---PEAVM 173
H N+V LG + L +++EF G++S+ L +F P+ PE +
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 174 R---------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAEL 224
+ Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 225 ATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVA 281
+ WMAPE I ++ +D+WS G + E+ + G P+ + +E
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 261
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
GT P+ + + +L C EP RPT SEL++H
Sbjct: 262 RRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 23/260 (8%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G FG V++G L+ ++ A+K + A +D I SHP +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAM-----SEEDFIEEAEVMMKL----SHPKL 62
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL-GKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
V+ G E+ + ++ EF+ G +S L + G F + + G+ YL +
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 122
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQTG 249
+HRD+ N LV IK++DFG ++ V + S GT + W +PEV +
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD----DQYTSSTGTKFPVKWASPEVFSFSR 178
Query: 250 HSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+S +D+WS G + E+ + GK P+ + EV G P + S +
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIM 235
Query: 308 LKCLEKEPDLRPTASELLKH 327
C ++ P+ RP S LL+
Sbjct: 236 NHCWKERPEDRPAFSRLLRQ 255
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 275 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 324
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 325 VQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVER 381
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAK-SMKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 437
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 438 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL---- 493
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C KEP+ RPT L
Sbjct: 494 HDLMCQCWRKEPEERPTFEYL 514
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 43/297 (14%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
++G GAFG+V N A+K++ ++ + +H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI---------RHTEEKLSTILSEVMLLASLNHQY 63
Query: 133 IVRY-------------LGTVREEESLNILLEFVPGGSISSLLG--KFGPFPEAVMRTYT 177
+VRY + V+++ +L I +E+ G++ L+ + R +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF- 122
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATV---------- 227
+Q+L L Y+H+ GI+HRD+K NI +D +K+ DFG +K V +
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 228 --SGAKSMKGTPYWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGKPPWSQQYQEVAALF 284
S GT ++A EV+ TGH + D++S+G EM P+S + V L
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK 239
Query: 285 HI-GTTKSHPPIPENLSVKAKDFLLKCL-EKEPDLRPTASELLKHPFVTGDDEDPVL 339
+ + PP ++ +K + +++ L + +P+ RP A LL ++ +D V+
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVI 296
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 23/260 (8%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G FG V++G L+ ++ A+K + A +D I SHP +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAM-----SEEDFIEEAEVMMKL----SHPKL 67
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL-GKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
V+ G E+ + ++ EF+ G +S L + G F + + G+ YL +
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 127
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQTG 249
+HRD+ N LV IK++DFG ++ V + S GT + W +PEV +
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD----DQYTSSTGTKFPVKWASPEVFSFSR 183
Query: 250 HSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+S +D+WS G + E+ + GK P+ + EV G P + S +
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIM 240
Query: 308 LKCLEKEPDLRPTASELLKH 327
C + P+ RP S LL+
Sbjct: 241 NHCWRERPEDRPAFSRLLRQ 260
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 28/286 (9%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA--QDHIXXXXXX 121
P R + G+ +G GAFG+V + D+ + A KE A +H
Sbjct: 16 PRDRLKLGKPLGRGAFGQV---IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 122 XXXXXXXSHPNIVRYLGTVREEES-LNILLEFVPGGSISSLL----GKFGPF---PEAVM 173
H N+V LG + L +++EF G++S+ L +F P+ PE +
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 174 R---------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAEL 224
+ Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 225 ATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVA 281
+ WMAPE I ++ +D+WS G + E+ + G P+ + +E
Sbjct: 193 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 252
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
GT P+ + + +L C EP RPT SEL++H
Sbjct: 253 RRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA--QDHIXXXXXX 121
P R G+ +G GAFG+V + D+ + A KE A +H
Sbjct: 26 PRDRLNLGKPLGRGAFGQV---IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 82
Query: 122 XXXXXXXSHPNIVRYLGTVREEES-LNILLEFVPGGSISSLL----GKFGPF--PEAVMR 174
H N+V LG + L +++EF G++S+ L +F P+ PE + +
Sbjct: 83 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYK 142
Query: 175 ---------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA 225
Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 226 TVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVAA 282
+ WMAPE I ++ +D+WS G + E+ + G P+ + +E
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 283 LFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
GT P+ + + +L C EP RPT SEL++H
Sbjct: 263 RLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 13/260 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
++IG G FG V G +L +++ +A + HP
Sbjct: 13 QVIGAGEFGEVCSG----HLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 68
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLHNH 190
N++ G V + + I+ EF+ GS+ S L + G F + + + G++YL +
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 128
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELA---TVSGAKSMKGTPYWMAPEVIRQ 247
+HR + NILV++ K++DFG S+ + + T + A K W APE I+
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 248 TGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ ++D+WS G + E M+ G +P W Q+V + I PP P +
Sbjct: 189 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV--INAIEQDYRLPP-PMDCPSALHQ 245
Query: 306 FLLKCLEKEPDLRPTASELL 325
+L C +K+ + RP +++
Sbjct: 246 LMLDCWQKDRNHRPKFGQIV 265
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 28/286 (9%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA--QDHIXXXXXX 121
P R + G+ +G GAFG+V + D+ + A KE A +H
Sbjct: 62 PRDRLKLGKPLGRGAFGQV---IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 118
Query: 122 XXXXXXXSHPNIVRYLGTVREEES-LNILLEFVPGGSISSLL----GKFGPF---PEAVM 173
H N+V LG + L +++EF G++S+ L +F P+ PE +
Sbjct: 119 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 178
Query: 174 R---------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAEL 224
+ Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + +
Sbjct: 179 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 238
Query: 225 ATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVA 281
+ WMAPE I ++ +D+WS G + E+ + G P+ + +E
Sbjct: 239 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 298
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
GT P+ + + +L C EP RPT SEL++H
Sbjct: 299 RRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 17/265 (6%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G GAFG V+ +G A K V+ + KE + I HP
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVL-------RHP 108
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSI-SSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
+V ++ + ++ EF+ GG + + + E Y +Q+ GL ++H +
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 191 GIMHRDIKGANILVDNKGC--IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
+H D+K NI+ K +KL DFG + A L K GT + APEV
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLT---AHLDPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 249 GHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSH--PPIPENLSVKAKDF 306
Y D+WSVG + +G P+ + + L ++ + + +S KDF
Sbjct: 226 PVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDETLRNVKSCDWNMDDSAFSGISEDGKDF 284
Query: 307 LLKCLEKEPDLRPTASELLKHPFVT 331
+ K L +P+ R T + L+HP++T
Sbjct: 285 IRKLLLADPNTRMTIHQALEHPWLT 309
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V ++ SG +AVK++ + ++ H
Sbjct: 50 PERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKL------SRPFQSIIHAKRTYRELRL 103
Query: 125 XXXXSHPNIVRYL-----GTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L T EE + L+ + G +++++ K + ++ Q
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 162
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 217
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTT------- 289
APE++ H + + DIWSVGC + E+ TG+ P + ++ + + T
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVIS 277
Query: 290 -----------KSHPPIPE----NLSVKAK----DFLLKCLEKEPDLRPTASELLKHPFV 330
S P +P+ ++ + A D L K L + D R TASE L HP+
Sbjct: 278 RMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337
Query: 331 TG----DDE 335
+ DDE
Sbjct: 338 SQYHDPDDE 346
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L N + + Q+ H +
Sbjct: 193 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGNMSPEAFLQE--------AQVMKKLRHEKL 242
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 243 VQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVER 299
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG + + E GAK +K W APE
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIK----WTAPEAAL 355
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPW-SQQYQEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 356 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL---- 411
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C K+P+ RPT L
Sbjct: 412 HDLMCQCWRKDPEERPTFEYL 432
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLH 188
HPNI+R G V I+ E++ GS+ + L G F + + + G+ YL
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 189 NHGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPE 243
+ G +HRD+ N+LVD+ K++DFG S+ + A T G ++ W APE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR----WTAPE 224
Query: 244 VIRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSV 301
I S ++D+WS G + E +A G +P W+ ++V + G P P
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY---RLPAPMGCPH 281
Query: 302 KAKDFLLKCLEKEPDLRPTASELL 325
+L C K+ RP S+++
Sbjct: 282 ALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 108/254 (42%), Gaps = 13/254 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG V G G+ K+ +A + HP
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGK----KESCVAIKTLKGGYTERQRREFLSEASIMGQFEHP 75
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLG-KFGPFPEAVMRTYTKQLLLGLEYLHNH 190
NI+R G V + IL EF+ G++ S L G F + + + G+ YL
Sbjct: 76 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEM 135
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELA---TVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ NILV++ K++DFG S+ + E + T + + K W APE I
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 248 TGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ ++D WS G + E M+ G +P W Q+V + I PP P +
Sbjct: 196 RKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV--INAIEQDYRLPP-PPDCPTSLHQ 252
Query: 306 FLLKCLEKEPDLRP 319
+L C +K+ + RP
Sbjct: 253 LMLDCWQKDRNARP 266
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 26/277 (9%)
Query: 71 GELIGCGAFGRVYM----GMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
G+ +G GAFG+V M G++ D + V + + A+++ D +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG- 98
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPEAVMR- 174
H NI+ LG ++ L +++ + G++ L P PE M
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 175 ----TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGA 230
+ T QL G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 231 KSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTT 289
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKE 274
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P N + + + C P RPT +L++
Sbjct: 275 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 107/254 (42%), Gaps = 13/254 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG V G G+ K+ +A + HP
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGK----KESCVAIKTLKGGYTERQRREFLSEASIMGQFEHP 77
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLG-KFGPFPEAVMRTYTKQLLLGLEYLHNH 190
NI+R G V + IL EF+ G++ S L G F + + + G+ YL
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEM 137
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQ 247
+HRD+ NILV++ K++DFG S+ + E ++ S G W APE I
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 248 TGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ ++D WS G + E M+ G +P W Q+V + I PP P +
Sbjct: 198 RKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV--INAIEQDYRLPP-PPDCPTSLHQ 254
Query: 306 FLLKCLEKEPDLRP 319
+L C +K+ + RP
Sbjct: 255 LMLDCWQKDRNARP 268
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 112/253 (44%), Gaps = 33/253 (13%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+M + +AVK + + A+ ++ H +
Sbjct: 190 LGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL---------QHDKL 239
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V +E + I+ EF+ GS+ L G P P+ + ++ Q+ G+ ++
Sbjct: 240 VK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI--DFSAQIAEGMAFIEQ 296
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
+HRD++ ANILV K+ADFG LA V +K W APE I
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFG-------LARVGAKFPIK----WTAPEAINFGS 345
Query: 250 HSYSADIWSVGCTVIEMAT-GKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+ +D+WS G ++E+ T G+ P+ EV G P PEN + + +
Sbjct: 346 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY---RMPRPENCPEELYNIM 402
Query: 308 LKCLEKEPDLRPT 320
++C + P+ RPT
Sbjct: 403 MRCWKNRPEERPT 415
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 241
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 242 VQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVER 298
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 354
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPW-SQQYQEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL---- 410
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C KEP+ RPT L
Sbjct: 411 HDLMCQCWRKEPEERPTFEYL 431
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 241
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 242 VQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVER 298
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 354
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPW-SQQYQEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL---- 410
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C KEP+ RPT L
Sbjct: 411 HDLMCQCWRKEPEERPTFEYL 431
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF-GPFPEAVMRTYTKQLLLGLEYLH 188
HPNI+R G V I+ E++ GS+ + L G F + + + G+ YL
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 189 NHGIMHRDIKGANILVDNKGCIKLADFGASKQV-----AELATVSGAKSMKGTPYWMAPE 243
+ G +HRD+ N+LVD+ K++DFG S+ + A T G ++ W APE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR----WTAPE 224
Query: 244 VIRQTGHSYSADIWSVGCTVIE-MATG-KPPWSQQYQEVAALFHIGTTKSHPPIPENLSV 301
I S ++D+WS G + E +A G +P W+ ++V + G P P
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY---RLPAPMGCPH 281
Query: 302 KAKDFLLKCLEKEPDLRPTASELL 325
+L C K+ RP S+++
Sbjct: 282 ALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V N + E A+K + QD P
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKML------------QDCPKARREVELHWRASQCP 115
Query: 132 NIVR----YLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IVR Y + L I++E + GG + S + G F E K + ++
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 175
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
YLH+ I HRD+K N+L +K +KL DFG +K+ +++ TPY++AP
Sbjct: 176 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPYYVAP 232
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQE-----VAALFHIGTTKSHPPIPE 297
EV+ + S D+WS+G + + G PP+ + + +G + P
Sbjct: 233 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 292
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV--LHAS 342
+S + K + L+ EP R T +E + HP++ + P LH S
Sbjct: 293 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 339
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 11/258 (4%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
+IG G FG VY G +D + ++ A S+ + +HPN
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQ----NRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 133 IVRYLGTVREEESL-NILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHNH 190
++ +G + E L ++LL ++ G + + P + ++ Q+ G+EYL
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 191 GIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQT 248
+HRD+ N ++D +K+ADFG ++ + E +V + + W A E ++
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTY 203
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+ +D+WS G + E+ T G PP+ ++ + L H P PE +
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGAPPY--RHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVM 261
Query: 308 LKCLEKEPDLRPTASELL 325
+C E +P +RPT L+
Sbjct: 262 QQCWEADPAVRPTFRVLV 279
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 17/265 (6%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G GAFG V+ +G A K V+ + KE + I HP
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVL-------RHP 214
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSI-SSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNH 190
+V ++ + ++ EF+ GG + + + E Y +Q+ GL ++H +
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 191 GIMHRDIKGANILVDNKGC--IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
+H D+K NI+ K +KL DFG + A L K GT + APEV
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLT---AHLDPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 249 GHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSH--PPIPENLSVKAKDF 306
Y D+WSVG + +G P+ + + L ++ + + +S KDF
Sbjct: 332 PVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDETLRNVKSCDWNMDDSAFSGISEDGKDF 390
Query: 307 LLKCLEKEPDLRPTASELLKHPFVT 331
+ K L +P+ R T + L+HP++T
Sbjct: 391 IRKLLLADPNTRMTIHQALEHPWLT 415
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V N + E A+K + QD P
Sbjct: 74 QVLGLGINGKVLQIFNKRTQEKFALKML------------QDCPKARREVELHWRASQCP 121
Query: 132 NIVR----YLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IVR Y + L I++E + GG + S + G F E K + ++
Sbjct: 122 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 181
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
YLH+ I HRD+K N+L +K +KL DFG +K+ +++ TPY++AP
Sbjct: 182 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPYYVAP 238
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQ-----EVAALFHIGTTKSHPPIPE 297
EV+ + S D+WS+G + + G PP+ + + +G + P
Sbjct: 239 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 298
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV--LHAS 342
+S + K + L+ EP R T +E + HP++ + P LH S
Sbjct: 299 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 345
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 109
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G++YL +
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 169
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ +D+WS G + E+ T G PP+ ++ + + PE +
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEV 287
Query: 307 LLKCLEKEPDLRPTASELL 325
+LKC + ++RP+ SEL+
Sbjct: 288 MLKCWHPKAEMRPSFSELV 306
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 23 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 72
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V + Q+ G+ Y+
Sbjct: 73 VQ-LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV--DMSAQIASGMAYVER 129
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 185
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH--- 242
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C KEP+ RPT L
Sbjct: 243 -DLMCQCWRKEPEERPTFEYL 262
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 15/261 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G++YL +
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQV--AELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPP--IPENLSVKAK 304
+ +D+WS G + E+ T G PP+ ++ + + P P+ L
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 266
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ +LKC + ++RP+ SEL+
Sbjct: 267 EVMLKCWHPKAEMRPSFSELV 287
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V N + E A+K + QD P
Sbjct: 30 QVLGLGINGKVLQIFNKRTQEKFALKML------------QDCPKARREVELHWRASQCP 77
Query: 132 NIVR----YLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IVR Y + L I++E + GG + S + G F E K + ++
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 137
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
YLH+ I HRD+K N+L +K +KL DFG +K+ +++ TPY++AP
Sbjct: 138 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPYYVAP 194
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQ-----EVAALFHIGTTKSHPPIPE 297
EV+ + S D+WS+G + + G PP+ + + +G + P
Sbjct: 195 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 254
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV--LHAS 342
+S + K + L+ EP R T +E + HP++ + P LH S
Sbjct: 255 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 301
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 23 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 72
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V + Q+ G+ Y+
Sbjct: 73 VQ-LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV--DMSAQIASGMAYVER 129
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK----WTAPEAAL 185
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH--- 242
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C KEP+ RPT L
Sbjct: 243 -DLMCQCWRKEPEERPTFEYL 262
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V N + E A+K + QD P
Sbjct: 28 QVLGLGINGKVLQIFNKRTQEKFALKML------------QDCPKARREVELHWRASQCP 75
Query: 132 NIVR----YLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IVR Y + L I++E + GG + S + G F E K + ++
Sbjct: 76 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 135
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
YLH+ I HRD+K N+L +K +KL DFG +K+ +++ TPY++AP
Sbjct: 136 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPYYVAP 192
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQ-----EVAALFHIGTTKSHPPIPE 297
EV+ + S D+WS+G + + G PP+ + + +G + P
Sbjct: 193 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 252
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV--LHAS 342
+S + K + L+ EP R T +E + HP++ + P LH S
Sbjct: 253 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 299
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 25/258 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 16 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 65
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 66 VQ-LYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVER 122
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
+HRD++ ANILV K+ADFG ++ + E + + K W APE
Sbjct: 123 MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPEAALYGR 181
Query: 250 HSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKAKDF 306
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L D
Sbjct: 182 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 237
Query: 307 LLKCLEKEPDLRPTASEL 324
+ +C KEP+ RPT L
Sbjct: 238 MCQCWRKEPEERPTFEYL 255
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V N + E A+K + QD P
Sbjct: 29 QVLGLGINGKVLQIFNKRTQEKFALKML------------QDCPKARREVELHWRASQCP 76
Query: 132 NIVR----YLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IVR Y + L I++E + GG + S + G F E K + ++
Sbjct: 77 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 136
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
YLH+ I HRD+K N+L +K +KL DFG +K+ +++ TPY++AP
Sbjct: 137 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPYYVAP 193
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQE-----VAALFHIGTTKSHPPIPE 297
EV+ + S D+WS+G + + G PP+ + + +G + P
Sbjct: 194 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 253
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV--LHAS 342
+S + K + L+ EP R T +E + HP++ + P LH S
Sbjct: 254 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 300
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 23/260 (8%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G FG V++G L+ ++ A+K + A +D I SHP +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAM-----SEEDFIEEAEVMMKL----SHPKL 65
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL-GKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
V+ G E+ + ++ EF+ G +S L + G F + + G+ YL +
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 125
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQTG 249
+HRD+ N LV IK++DFG ++ V + S GT + W +PEV +
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD----DQYTSSTGTKFPVKWASPEVFSFSR 181
Query: 250 HSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+S +D+WS G + E+ + GK P+ + EV G P + S +
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIM 238
Query: 308 LKCLEKEPDLRPTASELLKH 327
C + P+ RP S LL+
Sbjct: 239 NHCWRERPEDRPAFSRLLRQ 258
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 124/286 (43%), Gaps = 28/286 (9%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA--QDHIXXXXXX 121
P R + G+ +G GAFG+V + D+ + A KE A +H
Sbjct: 16 PRDRLKLGKPLGRGAFGQV---IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 122 XXXXXXXSHPNIVRYLGTVREEES-LNILLEFVPGGSISSLL----GKFGPF---PEAVM 173
H N+V LG + L ++ EF G++S+ L +F P+ PE +
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 174 R---------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAEL 224
+ Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 225 ATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVA 281
+ WMAPE I ++ +D+WS G + E+ + G P+ + +E
Sbjct: 193 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 252
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
GT P+ + + +L C EP RPT SEL++H
Sbjct: 253 RRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V N + E A+K + QD P
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKML------------QDCPKARREVELHWRASQCP 71
Query: 132 NIVR----YLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IVR Y + L I++E + GG + S + G F E K + ++
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
YLH+ I HRD+K N+L +K +KL DFG +K+ +++ TPY++AP
Sbjct: 132 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPYYVAP 188
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQ-----EVAALFHIGTTKSHPPIPE 297
EV+ + S D+WS+G + + G PP+ + + +G + P
Sbjct: 189 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 248
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV--LHAS 342
+S + K + L+ EP R T +E + HP++ + P LH S
Sbjct: 249 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G++YL +
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ +D+WS G + E+ T G PP+ ++ + + PE +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEV 269
Query: 307 LLKCLEKEPDLRPTASELL 325
+LKC + ++RP+ SEL+
Sbjct: 270 MLKCWHPKAEMRPSFSELV 288
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G++YL +
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 143
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ +D+WS G + E+ T G PP+ ++ + + PE +
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEV 261
Query: 307 LLKCLEKEPDLRPTASELL 325
+LKC + ++RP+ SEL+
Sbjct: 262 MLKCWHPKAEMRPSFSELV 280
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V N + E A+K + QD P
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALKML------------QDCPKARREVELHWRASQCP 85
Query: 132 NIVR----YLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IVR Y + L I++E + GG + S + G F E K + ++
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 145
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
YLH+ I HRD+K N+L +K +KL DFG +K+ +++ TPY++AP
Sbjct: 146 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPYYVAP 202
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQ-----EVAALFHIGTTKSHPPIPE 297
EV+ + S D+WS+G + + G PP+ + + +G + P
Sbjct: 203 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 262
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV--LHAS 342
+S + K + L+ EP R T +E + HP++ + P LH S
Sbjct: 263 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 309
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V N + E A+K + QD P
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKML------------QDCPKARREVELHWRASQCP 69
Query: 132 NIVR----YLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IVR Y + L I++E + GG + S + G F E K + ++
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
YLH+ I HRD+K N+L +K +KL DFG +K+ +++ TPY++AP
Sbjct: 130 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPYYVAP 186
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQE-----VAALFHIGTTKSHPPIPE 297
EV+ + S D+WS+G + + G PP+ + + +G + P
Sbjct: 187 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 246
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV--LHAS 342
+S + K + L+ EP R T +E + HP++ + P LH S
Sbjct: 247 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 126/296 (42%), Gaps = 43/296 (14%)
Query: 57 SPSVKMSPPIRW---RKGELIGCGAFGRVYM------GMNLDSGELLAVKQVLIAANFAS 107
+P + P + W + ++IG G FG+V G+ +D+ A+K++ +AS
Sbjct: 3 NPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDA----AIKRM---KEYAS 55
Query: 108 KEKAQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGK--- 164
K+ DH HPNI+ LG L + +E+ P G++ L K
Sbjct: 56 KD---DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 112
Query: 165 -----FGPFPEAVMRTYTKQLLL--------GLEYLHNHGIMHRDIKGANILVDNKGCIK 211
+ T + Q LL G++YL +HRD+ NILV K
Sbjct: 113 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 172
Query: 212 LADFGASKQVAELATVSGAKSMKGTPY-WMAPEVIRQTGHSYSADIWSVGCTVIEMAT-G 269
+ADFG S+ V K+M P WMA E + + ++ ++D+WS G + E+ + G
Sbjct: 173 IADFGLSRG----QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 228
Query: 270 KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+ A L+ P N + D + +C ++P RP+ +++L
Sbjct: 229 GTPYCG--MTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 10/209 (4%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G +G G FG VY G + +AVK++ + ++E Q H
Sbjct: 36 GNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQF----DQEIKVMAKCQH 89
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV--MRTYTKQ-LLLGLEYL 187
N+V LG + + L ++ ++P GS+ L P MR Q G+ +L
Sbjct: 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H + +HRDIK ANIL+D K++DFG ++ + A + GT +MAPE +R
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG 209
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQ 276
+ +DI+S G ++E+ TG P +
Sbjct: 210 EI-TPKSDIYSFGVVLLEIITGLPAVDEH 237
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 19 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 68
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 69 VQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVER 125
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 126 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 181
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH--- 238
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C KEP+ RPT L
Sbjct: 239 -DLMCQCWRKEPEERPTFEYL 258
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V N + E A+K + QD P
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKML------------QDCPKARREVELHWRASQCP 71
Query: 132 NIVR----YLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IVR Y + L I++E + GG + S + G F E K + ++
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
YLH+ I HRD+K N+L +K +KL DFG +K+ +++ TPY++AP
Sbjct: 132 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPYYVAP 188
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQE-----VAALFHIGTTKSHPPIPE 297
EV+ + S D+WS+G + + G PP+ + + +G + P
Sbjct: 189 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 248
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV--LHAS 342
+S + K + L+ EP R T +E + HP++ + P LH S
Sbjct: 249 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 9/206 (4%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFG-PFPEAVMRTYTKQLLLGLEYLH 188
H NI+ + E L ++ EF+ G I + E + +Y Q+ L++LH
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 189 NHGIMHRDIKGANILVDNK--GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
+H I H DI+ NI+ + IK+ +FG ++Q L + + P + APEV +
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ---LKPGDNFRLLFTAPEYYAPEVHQ 176
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQ--YQEVAALFHIGTTKSHPPIPENLSVKAK 304
S + D+WS+G V + +G P+ + Q + + + T E +S++A
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE-ISIEAM 235
Query: 305 DFLLKCLEKEPDLRPTASELLKHPFV 330
DF+ + L KE R TASE L+HP++
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWL 261
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 124/286 (43%), Gaps = 28/286 (9%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQ--DHIXXXXXX 121
P R + G+ +G GAFG+V + D+ + A KE A +H
Sbjct: 16 PRDRLKLGKPLGRGAFGQV---IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 122 XXXXXXXSHPNIVRYLGTVREEES-LNILLEFVPGGSISSLL----GKFGPF---PEAVM 173
H N+V LG + L ++ EF G++S+ L +F P+ PE +
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 174 R---------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAEL 224
+ Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 225 ATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVA 281
+ WMAPE I ++ +D+WS G + E+ + G P+ + +E
Sbjct: 193 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 252
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
GT P+ + + +L C EP RPT SEL++H
Sbjct: 253 RRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V N + E A+K + QD P
Sbjct: 23 QVLGLGINGKVLQIFNKRTQEKFALKML------------QDCPKARREVELHWRASQCP 70
Query: 132 NIVR----YLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IVR Y + L I++E + GG + S + G F E K + ++
Sbjct: 71 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 130
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
YLH+ I HRD+K N+L +K +KL DFG +K+ +++ TPY++AP
Sbjct: 131 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPYYVAP 187
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQ-----EVAALFHIGTTKSHPPIPE 297
EV+ + S D+WS+G + + G PP+ + + +G + P
Sbjct: 188 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 247
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV--LHAS 342
+S + K + L+ EP R T +E + HP++ + P LH S
Sbjct: 248 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 294
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 10/209 (4%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G +G G FG VY G + +AVK++ + ++E Q H
Sbjct: 36 GNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQF----DQEIKVMAKCQH 89
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV--MRTYTKQ-LLLGLEYL 187
N+V LG + + L ++ ++P GS+ L P MR Q G+ +L
Sbjct: 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H + +HRDIK ANIL+D K++DFG ++ + A + GT +MAPE +R
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG 209
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQ 276
+ +DI+S G ++E+ TG P +
Sbjct: 210 EI-TPKSDIYSFGVVLLEIITGLPAVDEH 237
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 110
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G++YL +
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 170
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ +D+WS G + E+ T G PP+ ++ + + PE +
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEV 288
Query: 307 LLKCLEKEPDLRPTASELL 325
+LKC + ++RP+ SEL+
Sbjct: 289 MLKCWHPKAEMRPSFSELV 307
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 24/282 (8%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA--QDHIXXXXXX 121
P R G+ +G GAFG+V + D+ + A KE A +H
Sbjct: 25 PRDRLNLGKPLGRGAFGQV---IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSEL 81
Query: 122 XXXXXXXSHPNIVRYLGTVREEES-LNILLEFVPGGSISSLL----GKFGPFPEAV---- 172
H N+V LG + L +++EF G++S+ L +F P+ +
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFL 141
Query: 173 ----MRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS 228
+ Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + +
Sbjct: 142 TLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 201
Query: 229 GAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVAALFH 285
+ WMAPE I ++ +D+WS G + E+ + G P+ + +E
Sbjct: 202 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 261
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
GT P+ + + +L C EP RPT SEL++H
Sbjct: 262 EGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 124/286 (43%), Gaps = 28/286 (9%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA--QDHIXXXXXX 121
P R + G+ +G GAFG+V + D+ + A KE A +H
Sbjct: 16 PRDRLKLGKPLGRGAFGQV---IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 122 XXXXXXXSHPNIVRYLGTVREEES-LNILLEFVPGGSISSLL----GKFGPF---PEAVM 173
H N+V LG + L ++ EF G++S+ L +F P+ PE +
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 174 R---------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAEL 224
+ Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 225 ATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVA 281
+ WMAPE I ++ +D+WS G + E+ + G P+ + +E
Sbjct: 193 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 252
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
GT P+ + + +L C EP RPT SEL++H
Sbjct: 253 RRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 126/296 (42%), Gaps = 43/296 (14%)
Query: 57 SPSVKMSPPIRW---RKGELIGCGAFGRVYM------GMNLDSGELLAVKQVLIAANFAS 107
+P + P + W + ++IG G FG+V G+ +D+ A+K++ +AS
Sbjct: 13 NPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDA----AIKRM---KEYAS 65
Query: 108 KEKAQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGK--- 164
K+ DH HPNI+ LG L + +E+ P G++ L K
Sbjct: 66 KD---DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 122
Query: 165 -----FGPFPEAVMRTYTKQLLL--------GLEYLHNHGIMHRDIKGANILVDNKGCIK 211
+ T + Q LL G++YL +HRD+ NILV K
Sbjct: 123 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 182
Query: 212 LADFGASKQVAELATVSGAKSMKGTPY-WMAPEVIRQTGHSYSADIWSVGCTVIEMAT-G 269
+ADFG S+ V K+M P WMA E + + ++ ++D+WS G + E+ + G
Sbjct: 183 IADFGLSRG----QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 238
Query: 270 KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+ A L+ P N + D + +C ++P RP+ +++L
Sbjct: 239 GTPYCG--MTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 109/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I++EF+ G++ L + V+ Q+ +EYL
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER-------PEGCPEK 238
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 239 VYELMRACWQWNPSDRPSFAEI 260
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G++YL +
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 149
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ +D+WS G + E+ T G PP+ ++ + + PE +
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEV 267
Query: 307 LLKCLEKEPDLRPTASELL 325
+LKC + ++RP+ SEL+
Sbjct: 268 MLKCWHPKAEMRPSFSELV 286
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 75
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I++E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 76 VQ-LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVER 132
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 188
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH--- 245
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C K+P+ RPT L
Sbjct: 246 -DLMCQCWRKDPEERPTFEYL 265
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 15/261 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G++YL +
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 148
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPP--IPENLSVKAK 304
+ +D+WS G + E+ T G PP+ ++ + + P P+ L
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 264
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ +LKC + ++RP+ SEL+
Sbjct: 265 EVMLKCWHPKAEMRPSFSELV 285
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G++YL +
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ +D+WS G + E+ T G PP+ ++ + + PE +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEV 269
Query: 307 LLKCLEKEPDLRPTASELL 325
+LKC + ++RP+ SEL+
Sbjct: 270 MLKCWHPKAEMRPSFSELV 288
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG VY G+ +AVK + KE + + HPN+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER-------PEGCPEK 238
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 239 VYELMRACWQWNPSDRPSFAEI 260
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G++YL +
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 146
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ +D+WS G + E+ T G PP+ ++ + + PE +
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEV 264
Query: 307 LLKCLEKEPDLRPTASELL 325
+LKC + ++RP+ SEL+
Sbjct: 265 MLKCWHPKAEMRPSFSELV 283
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 241
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 242 VQ-LYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVER 298
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 354
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPW-SQQYQEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL---- 410
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C KEP+ RPT L
Sbjct: 411 HDLMCQCWRKEPEERPTFEYL 431
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G++YL +
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ +D+WS G + E+ T G PP+ ++ + + PE +
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEV 268
Query: 307 LLKCLEKEPDLRPTASELL 325
+LKC + ++RP+ SEL+
Sbjct: 269 MLKCWHPKAEMRPSFSELV 287
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V N + E A+K + QD P
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKML------------QDCPKARREVELHWRASQCP 69
Query: 132 NIVR----YLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IVR Y + L I++E + GG + S + G F E K + ++
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
YLH+ I HRD+K N+L +K +KL DFG +K+ +++ TPY++AP
Sbjct: 130 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCY---TPYYVAP 186
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQ-----EVAALFHIGTTKSHPPIPE 297
EV+ + S D+WS+G + + G PP+ + + +G + P
Sbjct: 187 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 246
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV--LHAS 342
+S + K + L+ EP R T +E + HP++ + P LH S
Sbjct: 247 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 109/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 72
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I++EF+ G++ L + V+ Q+ +EYL
Sbjct: 73 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 132
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTXTAHAGAKFPIKWTAPESLAYN 188
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 189 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 241
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 242 VYELMRACWQWNPSDRPSFAEI 263
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 50/243 (20%)
Query: 134 VRYLGTVREEESLNILLEFVPGGSI---------SSLLG-------KFGPFPEAVMRTYT 177
+R L ++ E + +L F P SI ++L+G K + ++
Sbjct: 78 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLV 137
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
QLL GL+Y+H+ GI+HRD+K +N+ V+ +++ DFG ++Q E T T
Sbjct: 138 YQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVATR 192
Query: 238 YWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTT----- 289
++ APE++ H + + DIWSVGC + E+ GK P S ++ + + T
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV 252
Query: 290 -------------KSHPPIPE-NLSV-------KAKDFLLKCLEKEPDLRPTASELLKHP 328
+S PP+P+ +LS A D L + L + D R +A+E L H
Sbjct: 253 LAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 312
Query: 329 FVT 331
+ +
Sbjct: 313 YFS 315
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 36/290 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
EL+G GA+ +V ++L +G+ AVK + K+ +
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKII-------EKQAGHSRSRVFREVETLYQCQGNK 71
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHG 191
NI+ + ++ ++ E + GGSI + + K F E + + L++LH G
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG 131
Query: 192 IMHRDIKGANILVDN---KGCIKLADF--GASKQVAELATVSGAKSMK---GTPYWMAPE 243
I HRD+K NIL ++ +K+ DF G+ ++ T + G+ +MAPE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 244 VI-----RQTGHSYSADIWSVGCTVIEMATGKPPWSQQY-----QEVAALFHIGTTKSHP 293
V+ + T + D+WS+G + M +G PP+ + + + K
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFE 251
Query: 294 PIPE-----------NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTG 332
I E ++S +AKD + K L ++ R +A+++L+HP+V G
Sbjct: 252 SIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 30/273 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V + +G+ A+K L+ + ++++ H P
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALK--LLYDSPKARQEVDHH----------WQASGGP 63
Query: 132 NIVRYLGTVRE----EESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IV L + L I++E + GG + S + + G F E + + ++
Sbjct: 64 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 123
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
+LH+H I HRD+K N+L +K +KL DFG +K+ T + ++ TPY++AP
Sbjct: 124 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE----TTQNALQTPCYTPYYVAP 179
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALF--HIGTTKSHPPIPE-- 297
EV+ + S D+WS+G + + G PP +S Q ++ I + P PE
Sbjct: 180 EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWS 239
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
+S AK + L+ +P R T ++ + HP++
Sbjct: 240 EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 10/209 (4%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G +G G FG VY G + +AVK++ + ++E Q H
Sbjct: 30 GNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQF----DQEIKVMAKCQH 83
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV--MRTYTKQ-LLLGLEYL 187
N+V LG + + L ++ ++P GS+ L P MR Q G+ +L
Sbjct: 84 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 143
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H + +HRDIK ANIL+D K++DFG ++ + A + GT +MAPE +R
Sbjct: 144 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG 203
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQ 276
+ +DI+S G ++E+ TG P +
Sbjct: 204 EI-TPKSDIYSFGVVLLEIITGLPAVDEH 231
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 24/282 (8%)
Query: 64 PPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKA--QDHIXXXXXX 121
P R G+ +G GAFG+V + D+ + A KE A +H
Sbjct: 25 PRDRLNLGKPLGRGAFGQV---IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSEL 81
Query: 122 XXXXXXXSHPNIVRYLGTVREEES-LNILLEFVPGGSISSLL----GKFGPFPEAV---- 172
H N+V LG + L +++EF G++S+ L +F P+ +
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFL 141
Query: 173 ----MRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS 228
+ Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + +
Sbjct: 142 TLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYV 201
Query: 229 GAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVAALFH 285
+ WMAPE I ++ +D+WS G + E+ + G P+ + +E
Sbjct: 202 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLK 261
Query: 286 IGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
GT P+ + + +L C EP RPT SEL++H
Sbjct: 262 EGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 109/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I++EF+ G++ L + V+ Q+ +EYL
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 240
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 241 VYELMRACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 109/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I++EF+ G++ L + V+ Q+ +EYL
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 240
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 241 VYELMRACWQWNPSDRPSFAEI 262
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 25/259 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I++EF+ G++ L + V+ Q+ +EYL
Sbjct: 77 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHS 251
+HRD+ N LV +K+ADFG S+ + T + K W APE + S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 252 YSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+D+W+ G + E+AT G P+ SQ Y+ + + + PE K +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEKVYE 248
Query: 306 FLLKCLEKEPDLRPTASEL 324
+ C + P RP+ +E+
Sbjct: 249 LMRACWQWNPSDRPSFAEI 267
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 115/258 (44%), Gaps = 25/258 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 75
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I++E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 76 VQ-LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVER 132
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
+HRD++ ANILV K+ADFG ++ + E + + K W APE
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPEAALYGR 191
Query: 250 HSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKAKDF 306
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L D
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 247
Query: 307 LLKCLEKEPDLRPTASEL 324
+ +C K+P+ RPT L
Sbjct: 248 MCQCWRKDPEERPTFEYL 265
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 23/260 (8%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG G FG V++G L+ ++ A+K + KE + SHP +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKV-AIKTI--------KEGSMSE-DDFIEEAEVMMKLSHPKL 84
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL-GKFGPFPEAVMRTYTKQLLLGLEYLHNHGI 192
V+ G E+ + ++ EF+ G +S L + G F + + G+ YL +
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 144
Query: 193 MHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQTG 249
+HRD+ N LV IK++DFG ++ V + S GT + W +PEV +
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD----DQYTSSTGTKFPVKWASPEVFSFSR 200
Query: 250 HSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLSVKAKDFL 307
+S +D+WS G + E+ + GK P+ + EV G P + S +
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIM 257
Query: 308 LKCLEKEPDLRPTASELLKH 327
C ++ P+ RP S LL+
Sbjct: 258 NHCWKERPEDRPAFSRLLRQ 277
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 50/243 (20%)
Query: 134 VRYLGTVREEESLNILLEFVPGGSI---------SSLLG-------KFGPFPEAVMRTYT 177
+R L ++ E + +L F P SI ++L+G K + ++
Sbjct: 78 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLV 137
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
QLL GL+Y+H+ GI+HRD+K +N+ V+ +++ DFG ++Q E T T
Sbjct: 138 YQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVATR 192
Query: 238 YWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTT----- 289
++ APE++ H + + DIWSVGC + E+ GK P S ++ + + T
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV 252
Query: 290 -------------KSHPPIPE-NLSV-------KAKDFLLKCLEKEPDLRPTASELLKHP 328
+S PP+P+ +LS A D L + L + D R +A+E L H
Sbjct: 253 LAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 312
Query: 329 FVT 331
+ +
Sbjct: 313 YFS 315
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 30/273 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V + +G+ A+K L+ + ++++ H P
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALK--LLYDSPKARQEVDHH----------WQASGGP 82
Query: 132 NIVRYLGTVRE----EESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IV L + L I++E + GG + S + + G F E + + ++
Sbjct: 83 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
+LH+H I HRD+K N+L +K +KL DFG +K+ T + ++ TPY++AP
Sbjct: 143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE----TTQNALQTPCYTPYYVAP 198
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPP-WSQQYQEVAALF--HIGTTKSHPPIPE-- 297
EV+ + S D+WS+G + + G PP +S Q ++ I + P PE
Sbjct: 199 EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWS 258
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
+S AK + L+ +P R T ++ + HP++
Sbjct: 259 EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE-----KAQDHIXXXXXX 121
R++ + IG GA G + A ++ N A K+ + Q H
Sbjct: 25 RYQNLKPIGSGA-----------QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRT 175
+H NI+ L ++SL I++E + ++S ++ M
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSY 130
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG 235
Q+L+G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-------LARTAGTSFMMT 183
Query: 236 ----TPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATG 269
T Y+ APEVI G+ + DIWSVGC + EM G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G+++L +
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 210
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ +D+WS G + E+ T G PP+ ++ + + PE +
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEV 328
Query: 307 LLKCLEKEPDLRPTASELL 325
+LKC + ++RP+ SEL+
Sbjct: 329 MLKCWHPKAEMRPSFSELV 347
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 50/243 (20%)
Query: 134 VRYLGTVREEESLNILLEFVPGGSI---------SSLLG-------KFGPFPEAVMRTYT 177
+R L ++ E + +L F P SI ++L+G K + ++
Sbjct: 70 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLV 129
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
QLL GL+Y+H+ GI+HRD+K +N+ V+ +++ DFG ++Q E T T
Sbjct: 130 YQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT-----GYVATR 184
Query: 238 YWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTT----- 289
++ APE++ H + + DIWSVGC + E+ GK P S ++ + + T
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV 244
Query: 290 -------------KSHPPIPE-NLSV-------KAKDFLLKCLEKEPDLRPTASELLKHP 328
+S PP+P+ +LS A D L + L + D R +A+E L H
Sbjct: 245 LAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 304
Query: 329 FVT 331
+ +
Sbjct: 305 YFS 307
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 17 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 66
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 67 VQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVER 123
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 124 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 179
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH--- 236
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C K+P+ RPT L
Sbjct: 237 -DLMCQCWRKDPEERPTFEYL 256
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 117/265 (44%), Gaps = 39/265 (14%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQV----LIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V+MG + +A+K + + F + + I
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKI-------------R 71
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLE 185
H +V+ L V EE + I+ E++ GS+ L GK+ P+ V Q+ G+
Sbjct: 72 HEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMA 128
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAP 242
Y+ +HRD++ ANILV K+ADFG ++ + E GAK +K W AP
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAP 184
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENL 299
E + +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL 244
Query: 300 SVKAKDFLLKCLEKEPDLRPTASEL 324
D + +C K+P+ RPT L
Sbjct: 245 H----DLMCQCWRKDPEERPTFEYL 265
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 15/261 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G+++L +
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPP--IPENLSVKAK 304
+ +D+WS G + E+ T G PP+ ++ + + P P+ L
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 268
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ +LKC + ++RP+ SEL+
Sbjct: 269 EVMLKCWHPKAEMRPSFSELV 289
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 15/261 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G+++L +
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 149
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPP--IPENLSVKAK 304
+ +D+WS G + E+ T G PP+ ++ + + P P+ L
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 265
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ +LKC + ++RP+ SEL+
Sbjct: 266 EVMLKCWHPKAEMRPSFSELV 286
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 15 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 64
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 65 VQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVER 121
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 122 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 177
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 178 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH--- 234
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C K+P+ RPT L
Sbjct: 235 -DLMCQCWRKDPEERPTFEYL 254
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 20/256 (7%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG +S ++ AVK + + + H +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKV-AVKTL---------KPGTMSVQAFLEEANLMKTLQHDKL 70
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
VR V EE + I+ E++ GS+ L G P+ + ++ Q+ G+ Y+
Sbjct: 71 VRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLI--DFSAQIAEGMAYIER 128
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
+HRD++ AN+LV K+ADFG ++ V E + + K W APE I
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGC 187
Query: 250 HSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
+ +D+WS G + E+ T GK P+ + A + + P EN + D +
Sbjct: 188 FTIKSDVWSFGILLYEIVTYGKIPYPGRTN--ADVMTALSQGYRMPRVENCPDELYDIMK 245
Query: 309 KCLEKEPDLRPTASEL 324
C +++ + RPT L
Sbjct: 246 MCWKEKAEERPTFDYL 261
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 15/261 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G+++L +
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPP--IPENLSVKAK 304
+ +D+WS G + E+ T G PP+ ++ + + P P+ L
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 268
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ +LKC + ++RP+ SEL+
Sbjct: 269 EVMLKCWHPKAEMRPSFSELV 289
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 136
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 245
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 246 VYELMRACWQWNPSDRPSFAEI 267
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 15/261 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G+++L +
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPP--IPENLSVKAK 304
+ +D+WS G + E+ T G PP+ ++ + + P P+ L
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 267
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ +LKC + ++RP+ SEL+
Sbjct: 268 EVMLKCWHPKAEMRPSFSELV 288
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 15/261 (5%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G+++L +
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPP--IPENLSVKAK 304
+ +D+WS G + E+ T G PP+ ++ + + P P+ L
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY---- 267
Query: 305 DFLLKCLEKEPDLRPTASELL 325
+ +LKC + ++RP+ SEL+
Sbjct: 268 EVMLKCWHPKAEMRPSFSELV 288
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 40/292 (13%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXX--XXXXXXXXXS 129
+++G GA RV +NL + + AVK + EK HI
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKII---------EKQPGHIRSRVFREVEMLYQCQG 69
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
H N++ + EE+ ++ E + GGSI S + K F E + + L++LHN
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 190 HGIMHRDIKGANILVDNKGC---IKLADFGASKQV---AELATVSGAKSMK--GTPYWMA 241
GI HRD+K NIL ++ +K+ DFG + + + +S + + G+ +MA
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 242 PEVIRQTGHSYS-----ADIWSVGCTVIEMATGKPP----------WSQQYQEVAA---L 283
PEV+ S D+WS+G + + +G PP W + A L
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249
Query: 284 FH-IGTTKSHPPIPE--NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTG 332
F I K P + ++S AKD + K L ++ R +A+++L+HP+V G
Sbjct: 250 FESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 75
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 76 VQ-LYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVER 132
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 188
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH--- 245
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C K+P+ RPT L
Sbjct: 246 -DLMCQCWRKDPEERPTFEYL 265
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 22/282 (7%)
Query: 64 PPIRWRKGELIGCGAFGRVYMG--MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
P R G+ +G GAFG+V + + LD + V +V + S +D
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDLISEM 84
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGK---------FGPF--PE 170
H NI+ LG ++ L +++E+ G++ L F P PE
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPE 144
Query: 171 AVMRTY-----TKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA 225
+ + Q+ G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 226 TVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALF 284
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVEELF 262
Query: 285 HIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
+ P N + + + C P RPT +L++
Sbjct: 263 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTXTAHAGAKFPIKWTAPESLAYN 192
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 245
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 246 VYELMRACWQWNPSDRPSFAEI 267
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E+IG G FG VY G LD+ K++ A ++ + SHP
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 132 NIVRYLGT-VREEESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEYLHN 189
N++ LG +R E S ++L ++ G + + + P + + Q+ G+++L +
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 156
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKSMKGTPYWMAPEVIRQ 247
+HRD+ N ++D K +K+ADFG ++ + E +V K WMA E ++
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 248 TGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDF 306
+ +D+WS G + E+ T G PP+ ++ + + PE +
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEV 274
Query: 307 LLKCLEKEPDLRPTASELL 325
+LKC + ++RP+ SEL+
Sbjct: 275 MLKCWHPKAEMRPSFSELV 293
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 75
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 76 VQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVER 132
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 188
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH--- 245
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C K+P+ RPT L
Sbjct: 246 -DLMCQCWRKDPEERPTFEYL 265
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 20/256 (7%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG +S ++ AVK + + + H +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKV-AVKTL---------KPGTMSVQAFLEEANLMKTLQHDKL 69
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
VR V +EE + I+ EF+ GS+ L G P+ + ++ Q+ G+ Y+
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLI--DFSAQIAEGMAYIER 127
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTG 249
+HRD++ AN+LV K+ADFG ++ V E + + K W APE I
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGC 186
Query: 250 HSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLL 308
+ +++WS G + E+ T GK P+ + A + + P EN + D +
Sbjct: 187 FTIKSNVWSFGILLYEIVTYGKIPYPGRTN--ADVMSALSQGYRMPRMENCPDELYDIMK 244
Query: 309 KCLEKEPDLRPTASEL 324
C +++ + RPT L
Sbjct: 245 MCWKEKAEERPTFDYL 260
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 25/258 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY+G+ +AVK + KE + + HPN+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 90
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ E++P G++ L + V+ Q+ +EYL
Sbjct: 91 VQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN 150
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHS 251
+HRD+ N LV +K+ADFG S+ + T + K W APE + S
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNTFS 209
Query: 252 YSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+D+W+ G + E+AT G P+ SQ Y + + + + PP K +
Sbjct: 210 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPP-------KVYE 262
Query: 306 FLLKCLEKEPDLRPTASE 323
+ C + P RP+ +E
Sbjct: 263 LMRACWKWSPADRPSFAE 280
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 22/282 (7%)
Query: 64 PPIRWRKGELIGCGAFGRVYMG--MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
P R G+ +G GAFG+V + + LD + V +V + S +D
Sbjct: 15 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDLISEM 73
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPE 170
H NI+ LG ++ L +++E+ G++ L P PE
Sbjct: 74 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 133
Query: 171 AVMRTY-----TKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA 225
+ + Q+ G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 193
Query: 226 TVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALF 284
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVEELF 251
Query: 285 HIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
+ P N + + + C P RPT +L++
Sbjct: 252 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 293
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 22/282 (7%)
Query: 64 PPIRWRKGELIGCGAFGRVYMG--MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
P R G+ +G GAFG+V + + LD + V +V + S +D
Sbjct: 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDLISEM 69
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPE 170
H NI+ LG ++ L +++E+ G++ L P PE
Sbjct: 70 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 129
Query: 171 AVMRTY-----TKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA 225
+ + Q+ G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 226 TVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALF 284
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVEELF 247
Query: 285 HIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
+ P N + + + C P RPT +L++
Sbjct: 248 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 25/259 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHS 251
+HRD+ N LV +K+ADFG S+ + T + K W APE + S
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 252 YSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+D+W+ G + E+AT G P+ SQ Y+ + + + PE K +
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER-------PEGCPEKVYE 241
Query: 306 FLLKCLEKEPDLRPTASEL 324
+ C + P RP+ +E+
Sbjct: 242 LMRACWQWNPSDRPSFAEI 260
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 245
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 246 VYELMRACWQWNPSDRPSFAEI 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 240
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 241 VYELMRACWQWNPSDRPSFAEI 262
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 107/259 (41%), Gaps = 25/259 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 278
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 338
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHS 251
+HR++ N LV +K+ADFG S+ + T + K W APE + S
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 397
Query: 252 YSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+D+W+ G + E+AT G P+ SQ Y+ + + + PE K +
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEKVYE 450
Query: 306 FLLKCLEKEPDLRPTASEL 324
+ C + P RP+ +E+
Sbjct: 451 LMRACWQWNPSDRPSFAEI 469
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 75
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I++E++ G + L GK+ P+ V Q+ G+ Y+
Sbjct: 76 VQ-LYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVER 132
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 188
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH--- 245
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C K+P+ RPT L
Sbjct: 246 -DLMCQCWRKDPEERPTFEYL 265
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 36/218 (16%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE-----KAQDHIXXXXXX 121
R++ + IG GA G + A ++ N A K+ + Q H
Sbjct: 25 RYQNLKPIGSGA-----------QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRT 175
+H NI+ L ++SL I++E + ++S ++ M
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSY 130
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG 235
Q+L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-------LARTAGTSFMMT 183
Query: 236 ----TPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATG 269
T Y+ APEVI G+ + DIWSVGC + EM G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 240
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 241 VYELMRACWQWNPSDRPSFAEI 262
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 31/225 (13%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W +++G GA V+ G + +G+L A+K V +F Q
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIK-VFNNISFLRPVDVQ------MREFEVLKK 63
Query: 128 XSHPNIVRYLGTVREEESLN---ILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQL 180
+H NIV+ L + EE + +++EF P GS+ ++L +G PE+ + +
Sbjct: 64 LNHKNIVK-LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDV 121
Query: 181 LLGLEYLHNHGIMHRDIKGANILV----DNKGCIKLADFGASKQVAELATVSGAKSMKGT 236
+ G+ +L +GI+HR+IK NI+ D + KL DFGA++ EL S+ GT
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---ELEDDEQFVSLYGT 178
Query: 237 PYWMAPE-----VIR---QTGHSYSADIWSVGCTVIEMATGKPPW 273
++ P+ V+R Q + + D+WS+G T ATG P+
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 43/297 (14%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
++G GAFG+V N A+K++ ++ + +H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI---------RHTEEKLSTILSEVMLLASLNHQY 63
Query: 133 IVRY-------------LGTVREEESLNILLEFVPGGSISSLLG--KFGPFPEAVMRTYT 177
+VRY + V+++ +L I +E+ ++ L+ + R +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF- 122
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATV---------- 227
+Q+L L Y+H+ GI+HRD+K NI +D +K+ DFG +K V +
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 228 --SGAKSMKGTPYWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGKPPWSQQYQEVAALF 284
S GT ++A EV+ TGH + D++S+G EM P+S + V L
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK 239
Query: 285 HI-GTTKSHPPIPENLSVKAKDFLLKCL-EKEPDLRPTASELLKHPFVTGDDEDPVL 339
+ + PP ++ +K + +++ L + +P+ RP A LL ++ +D V+
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVI 296
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 22/282 (7%)
Query: 64 PPIRWRKGELIGCGAFGRVYMG--MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
P R G+ +G GAFG+V + + LD + V +V + S +D
Sbjct: 18 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDLISEM 76
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPE 170
H NI+ LG ++ L +++E+ G++ L P PE
Sbjct: 77 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 136
Query: 171 AVMRTY-----TKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA 225
+ + Q+ G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 196
Query: 226 TVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALF 284
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVEELF 254
Query: 285 HIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
+ P N + + + C P RPT +L++
Sbjct: 255 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 296
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 116
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQM 173
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 226
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 43/296 (14%)
Query: 57 SPSVKMSPPIRW---RKGELIGCGAFGRVYM------GMNLDSGELLAVKQVLIAANFAS 107
+P + P + W + ++IG G FG+V G+ +D+ A+K++ +AS
Sbjct: 10 NPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDA----AIKRM---KEYAS 62
Query: 108 KEKAQDHIXXXXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGK--- 164
K+ DH HPNI+ LG L + +E+ P G++ L K
Sbjct: 63 KD---DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 119
Query: 165 -----FGPFPEAVMRTYTKQLLL--------GLEYLHNHGIMHRDIKGANILVDNKGCIK 211
+ T + Q LL G++YL +HR++ NILV K
Sbjct: 120 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAK 179
Query: 212 LADFGASKQVAELATVSGAKSMKGTPY-WMAPEVIRQTGHSYSADIWSVGCTVIEMAT-G 269
+ADFG S+ V K+M P WMA E + + ++ ++D+WS G + E+ + G
Sbjct: 180 IADFGLSRG----QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 235
Query: 270 KPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+ A L+ P N + D + +C ++P RP+ +++L
Sbjct: 236 GTPYCG--MTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 22/282 (7%)
Query: 64 PPIRWRKGELIGCGAFGRVYMG--MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
P R G+ +G GAFG+V + + LD + V +V + S +D
Sbjct: 19 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDLISEM 77
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPE 170
H NI+ LG ++ L +++E+ G++ L P PE
Sbjct: 78 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 137
Query: 171 AVMRTY-----TKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA 225
+ + Q+ G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 197
Query: 226 TVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALF 284
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVEELF 255
Query: 285 HIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
+ P N + + + C P RPT +L++
Sbjct: 256 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 297
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 245
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 246 VYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 75
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 135
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 191
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 244
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 245 VYELMRACWQWNPSDRPSFAEI 266
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 22/282 (7%)
Query: 64 PPIRWRKGELIGCGAFGRVYMG--MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
P R G+ +G GAFG+V + + LD + V +V + S +D
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDLISEM 84
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPE 170
H NI+ LG ++ L +++E+ G++ L P PE
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPE 144
Query: 171 AVMRTY-----TKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA 225
+ + Q+ G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 226 TVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALF 284
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVEELF 262
Query: 285 HIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
+ P N + + + C P RPT +L++
Sbjct: 263 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 73
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 242
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 243 VYELMRACWQWNPSDRPSFAEI 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 25/259 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 72
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 73 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 132
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHS 251
+HRD+ N LV +K+ADFG S+ + T + K W APE + S
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFS 191
Query: 252 YSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+D+W+ G + E+AT G P+ SQ Y+ + + + PE K +
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEKVYE 244
Query: 306 FLLKCLEKEPDLRPTASEL 324
+ C + P RP+ +E+
Sbjct: 245 LMRACWQWNPSDRPSFAEI 263
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 22/282 (7%)
Query: 64 PPIRWRKGELIGCGAFGRVYMG--MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
P R G+ +G GAFG+V + + LD + V +V + S +D
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDLISEM 84
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPE 170
H NI+ LG ++ L +++E+ G++ L P PE
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 144
Query: 171 AVMRTY-----TKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA 225
+ + Q+ G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 226 TVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALF 284
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVEELF 262
Query: 285 HIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
+ P N + + + C P RPT +L++
Sbjct: 263 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 36/218 (16%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE-----KAQDHIXXXXXX 121
R++ + IG GA G + A ++ N A K+ + Q H
Sbjct: 25 RYQNLKPIGSGA-----------QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRT 175
+H NI+ L ++SL I++E + ++S ++ M
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSY 130
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG 235
Q+L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-------LARTAGTSFMMT 183
Query: 236 ----TPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATG 269
T Y+ APEVI G+ + DIWSVGC + EM G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 25/227 (11%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
++W GE GAFG+V++ + LL + ++ A A KE ++
Sbjct: 22 LKWELGE----GAFGKVFLA---ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 126 XXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV------------- 172
H +IVR+ G E L ++ E++ G ++ L GP + +
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 173 --MRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS-G 229
+ Q+ G+ YL +HRD+ N LV +K+ DFG S+ + G
Sbjct: 135 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 194
Query: 230 AKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQ 275
++M WM PE I + +D+WS G + E+ T GK PW Q
Sbjct: 195 GRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 22/282 (7%)
Query: 64 PPIRWRKGELIGCGAFGRVYMG--MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
P R G+ +G GAFG+V + + LD + V +V + S +D
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDLISEM 84
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPE 170
H NI+ LG ++ L +++E+ G++ L P PE
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 144
Query: 171 AVMRTY-----TKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA 225
+ + Q+ G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 226 TVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALF 284
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVEELF 262
Query: 285 HIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
+ P N + + + C P RPT +L++
Sbjct: 263 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 131
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 240
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 241 VYELMRACWQWNPSDRPSFAEI 262
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 73
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 242
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 243 VYELMRACWQWNPSDRPSFAEI 264
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 24/268 (8%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
GELIG G FG+VY G GE+ A++ + I + +D + H
Sbjct: 38 GELIGKGRFGQVYHGRW--HGEV-AIRLIDIERD------NEDQLKAFKREVMAYRQTRH 88
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEA-VMRTYTKQLLLGLEYLHN 189
N+V ++G L I+ G ++ S++ + R ++++ G+ YLH
Sbjct: 89 ENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA 148
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW---MAPEVIR 246
GI+H+D+K N+ DN G + + DFG L ++ W +APE+IR
Sbjct: 149 KGILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIR 207
Query: 247 QTG---------HSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
Q S +D++++G E+ + P+ Q E A ++ +GT
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-AIIWQMGTGMKPNLSQI 266
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELL 325
+ + D LL C E + RPT ++L+
Sbjct: 267 GMGKEISDILLFCWAFEQEERPTFTKLM 294
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 25/259 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 73
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHS 251
+HRD+ N LV +K+ADFG S+ + T + K W APE + S
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFS 192
Query: 252 YSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+D+W+ G + E+AT G P+ SQ Y+ + + + PE K +
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEKVYE 245
Query: 306 FLLKCLEKEPDLRPTASEL 324
+ C + P RP+ +E+
Sbjct: 246 LMRACWQWNPSDRPSFAEI 264
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 106/274 (38%), Gaps = 33/274 (12%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
IG GAFGRV+ G L ++A +E + D +PNI
Sbjct: 55 IGEGAFGRVFQARA--PGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGP------------------------FP 169
V+ LG + + +L E++ G ++ L P
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 170 EAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSG 229
A +Q+ G+ YL +HRD+ N LV +K+ADFG S+ + A
Sbjct: 173 CAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS-ADYYK 231
Query: 230 AKSMKGTPY-WMAPEVIRQTGHSYSADIWSVGCTVIEMATG--KPPWSQQYQEVAALFHI 286
A P WM PE I ++ +D+W+ G + E+ + +P + ++EV
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD 291
Query: 287 GTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPT 320
G + PEN ++ + + C K P RP+
Sbjct: 292 GNILA---CPENCPLELYNLMRLCWSKLPADRPS 322
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD---HERMSYLLYQM 135
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 136 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG---KFGP------------------ 167
+HP++++ G ++ L +++E+ GS+ L K GP
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 168 ---FPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAEL 224
+ ++ Q+ G++YL ++HRD+ NILV +K++DFG S+ V E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 225 ATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-------GKPPWSQQY 277
+ + WMA E + ++ +D+WS G + E+ T G PP
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP----- 258
Query: 278 QEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
LF++ T P+N S + +L+C ++EPD RP +++ K
Sbjct: 259 ---ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 25/227 (11%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
++W GE GAFG+V++ + LL + ++ A A KE ++
Sbjct: 45 LKWELGE----GAFGKVFLA---ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 126 XXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV------------- 172
H +IVR+ G E L ++ E++ G ++ L GP + +
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 173 --MRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS-G 229
+ Q+ G+ YL +HRD+ N LV +K+ DFG S+ + G
Sbjct: 158 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 217
Query: 230 AKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQ 275
++M WM PE I + +D+WS G + E+ T GK PW Q
Sbjct: 218 GRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 263
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 25/227 (11%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
++W GE GAFG+V++ + LL + ++ A A KE ++
Sbjct: 16 LKWELGE----GAFGKVFLA---ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 126 XXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV------------- 172
H +IVR+ G E L ++ E++ G ++ L GP + +
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 173 --MRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS-G 229
+ Q+ G+ YL +HRD+ N LV +K+ DFG S+ + G
Sbjct: 129 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 188
Query: 230 AKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQ 275
++M WM PE I + +D+WS G + E+ T GK PW Q
Sbjct: 189 GRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 234
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 84
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 85 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 144
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 200
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 201 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 253
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 254 VYELMRACWQWNPSDRPSFAEI 275
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 31/271 (11%)
Query: 74 IGCGAFGRVYMGMNLD--SGEL---LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G G+FG VY G D GE +AVK V +A+ ++ I
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL------RERIEFLNEASVMKGFT 78
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----------AVMRTYTK 178
H ++VR LG V + + +++E + G + S L P E M
Sbjct: 79 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT-- 236
++ G+ YL+ +HRD+ N +V + +K+ DFG ++ + E T K KG
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE--TDXXRKGGKGLLP 195
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA--ALFHIGTTKSHPP 294
WMAPE ++ + S+D+WS G + E+ + Q YQ ++ + +
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA---EQPYQGLSNEQVLKFVMDGGYLD 252
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+N + D + C + P++RPT E++
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 107/259 (41%), Gaps = 25/259 (9%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 317
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 318 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 377
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHS 251
+HR++ N LV +K+ADFG S+ + T + K W APE + S
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 436
Query: 252 YSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+D+W+ G + E+AT G P+ SQ Y+ + + + PE K +
Sbjct: 437 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEKVYE 489
Query: 306 FLLKCLEKEPDLRPTASEL 324
+ C + P RP+ +E+
Sbjct: 490 LMRACWQWNPSDRPSFAEI 508
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 22/282 (7%)
Query: 64 PPIRWRKGELIGCGAFGRVYMG--MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXX 121
P R G+ +G GAFG+V + + LD + V +V + S +D
Sbjct: 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDLISEM 125
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGP-----------FPE 170
H NI+ LG ++ L +++E+ G++ L P PE
Sbjct: 126 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 185
Query: 171 AVMRTY-----TKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELA 225
+ + Q+ G+EYL + +HRD+ N+LV +K+ADFG ++ + +
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
Query: 226 TVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALF 284
+ + WMAPE + +++ +D+WS G + E+ T G P+ V LF
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVEELF 303
Query: 285 HIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
+ P N + + + C P RPT +L++
Sbjct: 304 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 119/287 (41%), Gaps = 31/287 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+++G G G+V N + E A+K + QD P
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKXL------------QDCPKARREVELHWRASQCP 115
Query: 132 NIVR----YLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
+IVR Y + L I+ E + GG + S + G F E K + ++
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQ 175
Query: 186 YLHNHGIMHRDIKGANILVDNK---GCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
YLH+ I HRD+K N+L +K +KL DFG +K+ +++ TPY++AP
Sbjct: 176 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPYYVAP 232
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAA---LFHIGTTKSHPPIPE-- 297
EV+ + S D WS+G + G PP+ + + I + P PE
Sbjct: 233 EVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWS 292
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV--LHAS 342
+S + K + L+ EP R T +E HP++ + P LH S
Sbjct: 293 EVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTS 339
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG---KFGP------------------ 167
+HP++++ G ++ L +++E+ GS+ L K GP
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 168 ---FPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAEL 224
+ ++ Q+ G++YL ++HRD+ NILV +K++DFG S+ V E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 225 ATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-------GKPPWSQQY 277
+ + WMA E + ++ +D+WS G + E+ T G PP
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP----- 258
Query: 278 QEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
LF++ T P+N S + +L+C ++EPD RP +++ K
Sbjct: 259 ---ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 131
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HRD+ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 240
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 241 VYELMRACWQWNPSDRPSFAEI 262
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 116
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQM 173
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 226
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG---KFGP------------------ 167
+HP++++ G ++ L +++E+ GS+ L K GP
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 168 ---FPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAEL 224
+ ++ Q+ G++YL ++HRD+ NILV +K++DFG S+ V E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 225 ATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-------GKPPWSQQY 277
+ + WMA E + ++ +D+WS G + E+ T G PP
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP----- 258
Query: 278 QEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
LF++ T P+N S + +L+C ++EPD RP +++ K
Sbjct: 259 ---ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 127 XXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L ++SL I++E + + + M Q+
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQM 135
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPEVVT 188
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATG 269
Y+ APEVI G+ + DIWSVGC + EM G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 29/270 (10%)
Query: 74 IGCGAFGRVYMGMNLD--SGEL---LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G G+FG VY G D GE +AVK V +A+ ++ I
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL------RERIEFLNEASVMKGFT 78
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----------AVMRTYTK 178
H ++VR LG V + + +++E + G + S L P E M
Sbjct: 79 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATV-SGAKSMKGTP 237
++ G+ YL+ +HRD+ N +V + +K+ DFG ++ + E A G K +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV- 196
Query: 238 YWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA--ALFHIGTTKSHPPI 295
WMAPE ++ + S+D+WS G + E+ + Q YQ ++ + +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA---EQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 296 PENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+N + D + C + P +RPT E++
Sbjct: 254 PDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 115/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 75
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+
Sbjct: 76 VQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVER 132
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD+ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 133 MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 188
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH--- 245
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C K+P+ RPT L
Sbjct: 246 -DLMCQCWRKDPEERPTFEYL 265
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 138 GTVREEESLNILLEFVPGGSISSLLGKFGPF--------PEAVMRTYTKQLLLGLEYLHN 189
G + + + I+ E++ SI F P V++ K +L Y+HN
Sbjct: 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN 169
Query: 190 H-GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQT 248
I HRD+K +NIL+D G +KL+DFG S+ + + K +GT +M PE
Sbjct: 170 EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD----KKIKGSRGTYEFMPPEFFSNE 225
Query: 249 GHSYS---ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEN------- 298
SY+ DIWS+G + M P+S + V +I T P+ N
Sbjct: 226 S-SYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLT 284
Query: 299 ----------LSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
LS + DFL L K P R T+ + LKH ++
Sbjct: 285 NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 77
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 78 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQM 134
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 135 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 187
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 188 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD---HERMSYLLYQM 135
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 136 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQM 135
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 79
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQM 136
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 189
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQM 135
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL------ 182
SH +V+ G ++ + I+ E++ G + + L E R T+QLL
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVC 130
Query: 183 -GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
+EYL + +HRD+ N LV+++G +K++DFG S+ V + S S K W
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGS-KFPVRWSP 189
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQ-QYQEVAALFHIGTTKSHPPIPENL 299
PEV+ + S +DIW+ G + E+ + GK P+ + E A G P +
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA--- 246
Query: 300 SVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDE 335
S K + C ++ D RPT LL + D+E
Sbjct: 247 SEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G +G VY G+ +AVK + KE + + HPN+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTME-VEEFLKEAAVMKEIKHPNL 275
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHG 191
V+ LG E I+ EF+ G++ L + V+ Q+ +EYL
Sbjct: 276 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 335
Query: 192 IMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY---WMAPEVIRQT 248
+HR++ N LV +K+ADFG S+ L T + G + W APE +
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 391
Query: 249 GHSYSADIWSVGCTVIEMAT-GKPPW-----SQQYQEVAALFHIGTTKSHPPIPENLSVK 302
S +D+W+ G + E+AT G P+ SQ Y+ + + + PE K
Sbjct: 392 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-------PEGCPEK 444
Query: 303 AKDFLLKCLEKEPDLRPTASEL 324
+ + C + P RP+ +E+
Sbjct: 445 VYELMRACWQWNPSDRPSFAEI 466
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL------ 182
SH +V+ G ++ + I+ E++ G + + L E R T+QLL
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVC 130
Query: 183 -GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
+EYL + +HRD+ N LV+++G +K++DFG S+ V + S S K W
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVRWSP 189
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQ-QYQEVAALFHIGTTKSHPPIPENL 299
PEV+ + S +DIW+ G + E+ + GK P+ + E A G P +
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA--- 246
Query: 300 SVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDE 335
S K + C ++ D RPT LL + D+E
Sbjct: 247 SEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE-----KAQDHIXXXXXX 121
R++ + IG GA G ++A ++ N A K+ + Q H
Sbjct: 25 RYQNLKPIGSGA-----------QGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRT 175
+H NI+ L ++SL I++E + ++S ++ M
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSY 130
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG 235
Q+L+G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-------LARTAGTSFMMT 183
Query: 236 ----TPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATG 269
T Y+ APEVI G+ + DIWSVG + EM G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQV----LIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V+MG + +A+K + + +F + + +
Sbjct: 17 LGNGQFGEVWMG-TWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL-------------K 62
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLE 185
H +V+ L V EE + I+ E++ GS+ L G+ P V Q+ G+
Sbjct: 63 HDKLVQ-LYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLV--DMAAQVAAGMA 119
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
Y+ +HRD++ ANILV N K+ADFG ++ + E + + K W APE
Sbjct: 120 YIERMNYIHRDLRSANILVGNGLICKIADFGLARLI-EDNEXTARQGAKFPIKWTAPEAA 178
Query: 246 RQTGHSYSADIWSVGCTVIEMAT-GKPPW-SQQYQEVAALFHIGTTKSHPPIPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G P P++ +
Sbjct: 179 LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG---YRMPCPQDCPISL 235
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
+ ++ C +K+P+ RPT L
Sbjct: 236 HELMIHCWKKDPEERPTFEYL 256
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 72
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQM 129
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 182
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 183 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 72
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQM 129
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 182
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 183 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 127 XXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L ++SL I++E + ++S ++ M Q+
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSYLLYQM 135
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATG 269
Y+ APEVI G+ + DIWSVGC + EM G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 79
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQM 136
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 189
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL------ 182
SH +V+ G ++ + I+ E++ G + + L E R T+QLL
Sbjct: 57 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVC 110
Query: 183 -GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
+EYL + +HRD+ N LV+++G +K++DFG S+ V + S S K W
Sbjct: 111 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVRWSP 169
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQ-QYQEVAALFHIGTTKSHPPIPENL 299
PEV+ + S +DIW+ G + E+ + GK P+ + E A G P +
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA--- 226
Query: 300 SVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDE 335
S K + C ++ D RPT LL + D+E
Sbjct: 227 SEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 262
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 71
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD---HERMSYLLYQM 128
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 129 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-------LARTAGTSFMMTPYVVT 181
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 115/261 (44%), Gaps = 31/261 (11%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G G FG V+MG + +A+K L + + Q+ H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIK-TLKPGTMSPEAFLQE--------AQVMKKLRHEKL 75
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQLLLGLEYLHN 189
V+ L V EE + I+ E++ G + L GK+ P+ V Q+ G+ Y+
Sbjct: 76 VQ-LYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVER 132
Query: 190 HGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAPEVIR 246
+HRD++ ANILV K+ADFG ++ + E GAK +K W APE
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK----WTAPEAAL 188
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPWSQQY-QEVAALFHIGTTKSHPP-IPENLSVKA 303
+ +D+WS G + E+ T G+ P+ +EV G PP PE+L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH--- 245
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
D + +C K+P+ RPT L
Sbjct: 246 -DLMCQCWRKDPEERPTFEYL 265
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL------ 182
SH +V+ G ++ + I+ E++ G + + L E R T+QLL
Sbjct: 61 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVC 114
Query: 183 -GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
+EYL + +HRD+ N LV+++G +K++DFG S+ V + S S K W
Sbjct: 115 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVRWSP 173
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQ-QYQEVAALFHIGTTKSHPPIPENL 299
PEV+ + S +DIW+ G + E+ + GK P+ + E A G P +
Sbjct: 174 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA--- 230
Query: 300 SVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDE 335
S K + C ++ D RPT LL + D+E
Sbjct: 231 SEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 266
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 108/259 (41%), Gaps = 64/259 (24%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGK--FGPFPEAVMRTYTKQLLLGLEY 186
+HPNIV Y T + L ++ F+ GS L+ E + + +L L+Y
Sbjct: 68 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 127
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAK-----------SMKG 235
+H+ G +HR +K ++IL+ G + L+ ++ L+ +S + S+K
Sbjct: 128 IHHMGYVHRSVKASHILISVDGKVYLSGLRSN-----LSMISHGQRQRVVHDFPKYSVKV 182
Query: 236 TPYWMAPEVIRQTGHSYSA--DIWSVGCTVIEMATGKPPW-----SQQYQE-----VAAL 283
P W++PEV++Q Y A DI+SVG T E+A G P+ +Q E V L
Sbjct: 183 LP-WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 241
Query: 284 FHIGT-----------------------TKSHP----------PIPENLSVKAKDFLLKC 310
T T S P P S F+ +C
Sbjct: 242 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQC 301
Query: 311 LEKEPDLRPTASELLKHPF 329
L++ PD RP+AS LL H F
Sbjct: 302 LQRNPDARPSASTLLNHSF 320
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 31/271 (11%)
Query: 74 IGCGAFGRVYMGMNLD--SGEL---LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G G+FG VY G D GE +AVK V +A+ ++ I
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL------RERIEFLNEASVMKGFT 75
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----------AVMRTYTK 178
H ++VR LG V + + +++E + G + S L P E M
Sbjct: 76 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT-- 236
++ G+ YL+ +HRD+ N +V + +K+ DFG ++ + E T K KG
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE--TDXXRKGGKGLLP 192
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA--ALFHIGTTKSHPP 294
WMAPE ++ + S+D+WS G + E+ + Q YQ ++ + +
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA---EQPYQGLSNEQVLKFVMDGGYLD 249
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+N + D + C + P +RPT E++
Sbjct: 250 QPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 108/259 (41%), Gaps = 64/259 (24%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGK--FGPFPEAVMRTYTKQLLLGLEY 186
+HPNIV Y T + L ++ F+ GS L+ E + + +L L+Y
Sbjct: 84 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 143
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAK-----------SMKG 235
+H+ G +HR +K ++IL+ G + L+ ++ L+ +S + S+K
Sbjct: 144 IHHMGYVHRSVKASHILISVDGKVYLSGLRSN-----LSMISHGQRQRVVHDFPKYSVKV 198
Query: 236 TPYWMAPEVIRQTGHSYSA--DIWSVGCTVIEMATGKPPW-----SQQYQE-----VAAL 283
P W++PEV++Q Y A DI+SVG T E+A G P+ +Q E V L
Sbjct: 199 LP-WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 257
Query: 284 FHIGT-----------------------TKSHP----------PIPENLSVKAKDFLLKC 310
T T S P P S F+ +C
Sbjct: 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQC 317
Query: 311 LEKEPDLRPTASELLKHPF 329
L++ PD RP+AS LL H F
Sbjct: 318 LQRNPDARPSASTLLNHSF 336
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 81
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 140
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ A+ T T ++
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT-----GYVATRWY 195
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 71
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQM 128
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 129 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 181
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 33/274 (12%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
LIG G FG+VY G+ L G +A+K+ + E +Q I HP+
Sbjct: 46 LIGHGVFGKVYKGV-LRDGAKVALKR-------RTPESSQG-IEEFETEIETLSFCRHPH 96
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL------GLEY 186
+V +G E + ++ +++ G++ L +G + ++ ++L + GL Y
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHL--YGSDLPTMSMSWEQRLEICIGAARGLHY 154
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
LH I+HRD+K NIL+D K+ DFG SK+ EL +KGT ++ PE
Sbjct: 155 LHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFI 214
Query: 247 QTGHSYSADIWSVGCTVIEMATGK--------------PPWSQQYQEVAALFHIGTTKSH 292
+ + +D++S G + E+ + W+ + L I
Sbjct: 215 KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLA 274
Query: 293 PPI-PENLSVKAKDFLLKCLEKEPDLRPTASELL 325
I PE+L K D +KCL + RP+ ++L
Sbjct: 275 DKIRPESLR-KFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 31/271 (11%)
Query: 74 IGCGAFGRVYMGMNLD--SGEL---LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G G+FG VY G D GE +AVK V +A+ ++ I
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL------RERIEFLNEASVMKGFT 78
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----------AVMRTYTK 178
H ++VR LG V + + +++E + G + S L P E M
Sbjct: 79 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT-- 236
++ G+ YL+ +HRD+ N +V + +K+ DFG ++ + E T K KG
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE--TDXXRKGGKGLLP 195
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA--ALFHIGTTKSHPP 294
WMAPE ++ + S+D+WS G + E+ + Q YQ ++ + +
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA---EQPYQGLSNEQVLKFVMDGGYLD 252
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+N + D + C + P +RPT E++
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD---HERMSYLLYQM 135
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 127 XXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L ++SL I++E + + + M Q+
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQM 135
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATG 269
Y+ APEVI G+ + DIWSVGC + EM G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
++ K IG G FG V+ + +G+ +A+K+VL+ + + +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM------ENEKEGFPITALREIKILQ 72
Query: 127 XXSHPNIVRYLGTVREEES--------LNILLEFVP---GGSISSLLGKFGPFPEAVMRT 175
H N+V + R + S + ++ +F G +S++L KF + ++
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL---SEIKR 129
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASK--QVAELATVSGAKSM 233
+ LL GL Y+H + I+HRD+K AN+L+ G +KLADFG ++ +A+ + + +
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 234 KGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
T ++ PE++ + + D+W GC + EM T P
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRV----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V Y + ++G L+AVKQ+ + D
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQL--------QHSGPDQQRDFQREIQILKALH 69
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
IV+Y G +SL +++E++P G + L + +A + Y+ Q+ G+EY
Sbjct: 70 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 129
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L + +HRD+ NILV+++ +K+ADFG +K + + +P +W APE +
Sbjct: 130 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 189
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
S +D+WS G + E+ T
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 81
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 140
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ A+ T T ++
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT-----GYVATRWY 195
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL------SRPFQNQTHAKRAYRELVLMK 79
Query: 127 XXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L ++SL I++E + + + M Q+
Sbjct: 80 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQM 136
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 189
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATG 269
Y+ APEVI G+ + DIWSVGC + EM G
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 127 XXSHPNIVRYLG------TVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L T+ E + + +++E + + + M Q+
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQM 135
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 22/245 (8%)
Query: 131 PNIVRYLGTVREEESL--NILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
PNIV+ L VR++ S +++ E+V L + + +R Y +LL L+Y H
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 144
Query: 189 NHGIMHRDIKGANILVDNK-GCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPE-VI 245
+ GIMHRD+K N+++D++ ++L D+G +AE +++ + Y+ PE ++
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 200
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ YS D+WS+GC M K P+ + L I + L+V
Sbjct: 201 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----TDGLNVYLNK 256
Query: 306 FLLKCLEKEPDLRPTASELLKHP---FVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
+ +E +P L + P F+ D++ V ++ ++L H L +L+
Sbjct: 257 YR---IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 313
Query: 363 MLTSP 367
+T P
Sbjct: 314 AMTHP 318
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 81
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-------KFGPFPEAVMRTYT 177
H N++ L SL EF ++ L+G K + ++
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLE---EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
Q+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ A+ T T
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT-----GYVATR 193
Query: 238 YWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
++ APE++ H + + DIWSVGC + E+ TG+
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 127 XXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L ++SL I++E + + + M Q+
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQM 135
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATG 269
Y+ APEVI G+ + DIWSVGC + EM G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL------ 182
SH +V+ G ++ + I+ E++ G + + L E R T+QLL
Sbjct: 68 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVC 121
Query: 183 -GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
+EYL + +HRD+ N LV+++G +K++DFG S+ V + S S K W
Sbjct: 122 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVRWSP 180
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQ-QYQEVAALFHIGTTKSHPPIPENL 299
PEV+ + S +DIW+ G + E+ + GK P+ + E A G P +
Sbjct: 181 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA--- 237
Query: 300 SVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDE 335
S K + C ++ D RPT LL + D+E
Sbjct: 238 SEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 273
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 27 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL------SRPFQNQTHAKRAYRELVLMK 80
Query: 127 XXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L ++SL I++E + + + M Q+
Sbjct: 81 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQM 137
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMK----GT 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 138 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMVPFVVT 190
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATG 269
Y+ APEVI G+ + DIWSVGC + EM G
Sbjct: 191 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 40/234 (17%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVL-IAANFASKEKAQDHIXXXXXXXX 123
P R+ LIG G++G V + ++A+K++L + + ++ I
Sbjct: 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-- 109
Query: 124 XXXXXSHPNIVRYLGTV-----REEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK 178
+H ++V+ L V + + L ++LE + L E ++T
Sbjct: 110 -----NHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKTLLY 163
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQV----------------- 221
LL+G++Y+H+ GI+HRD+K AN LV+ +K+ DFG ++ V
Sbjct: 164 NLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPRED 223
Query: 222 -AELATVSGAKSMKG-------TPYWMAPEVI-RQTGHSYSADIWSVGCTVIEM 266
L T K++K T ++ APE+I Q ++ + D+WS+GC E+
Sbjct: 224 DMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 22/245 (8%)
Query: 131 PNIVRYLGTVREEESL--NILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
PNIV+ L VR++ S +++ E+V L + + +R Y +LL L+Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 142
Query: 189 NHGIMHRDIKGANILVDNK-GCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPE-VI 245
+ GIMHRD+K N+++D++ ++L D+G +AE +++ + Y+ PE ++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ YS D+WS+GC M K P+ + L I + L+V
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----TDGLNVYLNK 254
Query: 306 FLLKCLEKEPDLRPTASELLKHP---FVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
+ +E +P L + P F+ D++ V ++ ++L H L +L+
Sbjct: 255 Y---RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 363 MLTSP 367
+T P
Sbjct: 312 AMTHP 316
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 22/245 (8%)
Query: 131 PNIVRYLGTVREEESL--NILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
PNIV+ L VR++ S +++ E+V L + + +R Y +LL L+Y H
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 143
Query: 189 NHGIMHRDIKGANILVDNK-GCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPE-VI 245
+ GIMHRD+K N+++D++ ++L D+G +AE +++ + Y+ PE ++
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 199
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ YS D+WS+GC M K P+ + L I + L+V
Sbjct: 200 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----TDGLNVYLNK 255
Query: 306 FLLKCLEKEPDLRPTASELLKHP---FVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
+ +E +P L + P F+ D++ V ++ ++L H L +L+
Sbjct: 256 YR---IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 312
Query: 363 MLTSP 367
+T P
Sbjct: 313 AMTHP 317
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 22/245 (8%)
Query: 131 PNIVRYLGTVREEESL--NILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
PNIV+ L VR++ S +++ E+V L + + +R Y +LL L+Y H
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 143
Query: 189 NHGIMHRDIKGANILVDNK-GCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPE-VI 245
+ GIMHRD+K N+++D++ ++L D+G +AE +++ + Y+ PE ++
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 199
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ YS D+WS+GC M K P+ + L I + L+V
Sbjct: 200 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----TDGLNVYLNK 255
Query: 306 FLLKCLEKEPDLRPTASELLKHP---FVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
+ +E +P L + P F+ D++ V ++ ++L H L +L+
Sbjct: 256 Y---RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 312
Query: 363 MLTSP 367
+T P
Sbjct: 313 AMTHP 317
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRV----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V Y + ++G L+AVKQ+ + D
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQL--------QHSGPDQQRDFQREIQILKALH 70
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
IV+Y G +SL +++E++P G + L + +A + Y+ Q+ G+EY
Sbjct: 71 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 130
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L + +HRD+ NILV+++ +K+ADFG +K + + +P +W APE +
Sbjct: 131 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 190
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
S +D+WS G + E+ T
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 22/245 (8%)
Query: 131 PNIVRYLGTVREEESL--NILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
PNIV+ L VR++ S +++ E+V L + + +R Y +LL L+Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 142
Query: 189 NHGIMHRDIKGANILVDNK-GCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPE-VI 245
+ GIMHRD+K N+++D++ ++L D+G +AE +++ + Y+ PE ++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ YS D+WS+GC M K P+ + L I + L+V
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----TDGLNVYLNK 254
Query: 306 FLLKCLEKEPDLRPTASELLKHP---FVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
+ +E +P L + P F+ D++ V ++ ++L H L +L+
Sbjct: 255 YR---IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 363 MLTSP 367
+T P
Sbjct: 312 AMTHP 316
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 127 XXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L ++SL I++E + + + M Q+
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQM 135
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMEPEVVT 188
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + DIWSVGC + EM K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
W +++G GA V+ G + +G+L A+K V +F Q
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIK-VFNNISFLRPVDVQ------MREFEVLKK 63
Query: 128 XSHPNIVRYLGTVREEESLN---ILLEFVPGGSISSLL----GKFGPFPEAVMRTYTKQL 180
+H NIV+ L + EE + +++EF P GS+ ++L +G PE+ + +
Sbjct: 64 LNHKNIVK-LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDV 121
Query: 181 LLGLEYLHNHGIMHRDIKGANILV----DNKGCIKLADFGASKQVAELATVSGAKSMKGT 236
+ G+ +L +GI+HR+IK NI+ D + KL DFGA++ EL + GT
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---ELEDDEQFVXLYGT 178
Query: 237 PYWMAPE-----VIR---QTGHSYSADIWSVGCTVIEMATGKPPW 273
++ P+ V+R Q + + D+WS+G T ATG P+
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 22/245 (8%)
Query: 131 PNIVRYLGTVREEESL--NILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
PNIV+ L VR++ S +++ E+V L + + +R Y +LL L+Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 142
Query: 189 NHGIMHRDIKGANILVDNK-GCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPE-VI 245
+ GIMHRD+K N+++D++ ++L D+G +AE +++ + Y+ PE ++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ YS D+WS+GC M K P+ + L I + L+V
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----TDGLNVYLNK 254
Query: 306 FLLKCLEKEPDLRPTASELLKHP---FVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
+ +E +P L + P F+ D++ V ++ ++L H L +L+
Sbjct: 255 Y---RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 363 MLTSP 367
+T P
Sbjct: 312 AMTHP 316
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 22/245 (8%)
Query: 131 PNIVRYLGTVREEESL--NILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
PNIV+ L VR++ S +++ E+V L + + +R Y +LL L+Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 142
Query: 189 NHGIMHRDIKGANILVDNK-GCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPE-VI 245
+ GIMHRD+K N+++D++ ++L D+G +AE +++ + Y+ PE ++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ YS D+WS+GC M K P+ + L I + L+V
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----TDGLNVYLNK 254
Query: 306 FLLKCLEKEPDLRPTASELLKHP---FVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
+ +E +P L + P F+ D++ V ++ ++L H L +L+
Sbjct: 255 YR---IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 363 MLTSP 367
+T P
Sbjct: 312 AMTHP 316
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 33/274 (12%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
LIG G FG+VY G+ L G +A+K+ + E +Q I HP+
Sbjct: 46 LIGHGVFGKVYKGV-LRDGAKVALKR-------RTPESSQG-IEEFETEIETLSFCRHPH 96
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL------GLEY 186
+V +G E + ++ +++ G++ L +G + ++ ++L + GL Y
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHL--YGSDLPTMSMSWEQRLEICIGAARGLHY 154
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
LH I+HRD+K NIL+D K+ DFG SK+ EL +KGT ++ PE
Sbjct: 155 LHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFI 214
Query: 247 QTGHSYSADIWSVGCTVIEMATGK--------------PPWSQQYQEVAALFHIGTTKSH 292
+ + +D++S G + E+ + W+ + L I
Sbjct: 215 KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLA 274
Query: 293 PPI-PENLSVKAKDFLLKCLEKEPDLRPTASELL 325
I PE+L K D +KCL + RP+ ++L
Sbjct: 275 DKIRPESLR-KFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 22/245 (8%)
Query: 131 PNIVRYLGTVREEESL--NILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
PNIV+ L VR++ S +++ E+V L + + +R Y +LL L+Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 142
Query: 189 NHGIMHRDIKGANILVDNK-GCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPE-VI 245
+ GIMHRD+K N+++D++ ++L D+G +AE +++ + Y+ PE ++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ YS D+WS+GC M K P+ + L I + L+V
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----TDGLNVYLNK 254
Query: 306 FLLKCLEKEPDLRPTASELLKHP---FVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
+ +E +P L + P F+ D++ V ++ ++L H L +L+
Sbjct: 255 Y---RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 363 MLTSP 367
+T P
Sbjct: 312 AMTHP 316
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRV----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V Y + ++G L+AVKQ+ + D
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQL--------QHSGPDQQRDFQREIQILKALH 82
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
IV+Y G +SL +++E++P G + L + +A + Y+ Q+ G+EY
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 142
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L + +HRD+ NILV+++ +K+ADFG +K + + +P +W APE +
Sbjct: 143 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
S +D+WS G + E+ T
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 129/292 (44%), Gaps = 40/292 (13%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXX--XXXXXXXXXS 129
+++G GA RV +NL + + AVK + EK HI
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKII---------EKQPGHIRSRVFREVEMLYQCQG 69
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
H N++ + EE+ ++ E + GGSI S + K F E + + L++LHN
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 190 HGIMHRDIKGANILVDNKGC---IKLADFGASKQV---AELATVSGAKSMK--GTPYWMA 241
GI HRD+K NIL ++ +K+ DF + + + +S + + G+ +MA
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 242 PEVIRQTGHSYS-----ADIWSVGCTVIEMATGKPP----------WSQQYQEVAA---L 283
PEV+ S D+WS+G + + +G PP W + A L
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249
Query: 284 FH-IGTTKSHPPIPE--NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTG 332
F I K P + ++S AKD + K L ++ R +A+++L+HP+V G
Sbjct: 250 FESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 22/245 (8%)
Query: 131 PNIVRYLGTVREEESL--NILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
PNIV+ L VR++ S +++ E+V L + + +R Y +LL L+Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 142
Query: 189 NHGIMHRDIKGANILVDNK-GCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPE-VI 245
+ GIMHRD+K N+++D++ ++L D+G +AE +++ + Y+ PE ++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ YS D+WS+GC M K P+ + L I + L+V
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----TDGLNVYLNK 254
Query: 306 FLLKCLEKEPDLRPTASELLKHP---FVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
+ +E +P L + P F+ D++ V ++ ++L H L +L+
Sbjct: 255 Y---RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 363 MLTSP 367
+T P
Sbjct: 312 AMTHP 316
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 70
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-------KFGPFPEAVMRTYT 177
H N++ L SL EF ++ L+G K + ++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLE---EFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLI 127
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
Q+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATR 182
Query: 238 YWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
++ APE++ H + + DIWSVGC + E+ TG+
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
++ K IG G FG V+ + +G+ +A+K+VL+ + + +
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM------ENEKEGFPITALREIKILQ 71
Query: 127 XXSHPNIVRYLGTVREEES--------LNILLEFVP---GGSISSLLGKFGPFPEAVMRT 175
H N+V + R + S + ++ +F G +S++L KF + ++
Sbjct: 72 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL---SEIKR 128
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASK--QVAELATVSGAKSM 233
+ LL GL Y+H + I+HRD+K AN+L+ G +KLADFG ++ +A+ + + +
Sbjct: 129 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 188
Query: 234 KGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
T ++ PE++ + + D+W GC + EM T P
Sbjct: 189 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 227
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R+ IG GA+G V + V +V +A S + Q +
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYD-------NVNKVRVAIKKISPFEHQTYCQRTLREIKILL 96
Query: 127 XXSHPNIVRYLGTVR----EEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL 182
H NI+ +R E+ L+ + G + LL K + + Q+L
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL-KTQHLSNDHICYFLYQILR 155
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MKGTPYWMA 241
GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G + T ++ A
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 242 PEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKSHPPIPEN 298
PE++ + G++ S DIWSVGC + EM + +P P ++ + I + S +
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 299 LSVKAKDFLL 308
+++KA+++LL
Sbjct: 276 INLKARNYLL 285
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
++ K IG G FG V+ + +G+ +A+K+VL+ + + +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM------ENEKEGFPITALREIKILQ 72
Query: 127 XXSHPNIVRYLGTVREEES--------LNILLEFVP---GGSISSLLGKFGPFPEAVMRT 175
H N+V + R + S + ++ +F G +S++L KF + ++
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTL---SEIKR 129
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASK--QVAELATVSGAKSM 233
+ LL GL Y+H + I+HRD+K AN+L+ G +KLADFG ++ +A+ + + +
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 234 KGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
T ++ PE++ + + D+W GC + EM T P
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 31 PERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 84
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 143
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 198
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 36/218 (16%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE-----KAQDHIXXXXXX 121
R++ + IG GA G + A ++ N A K+ + Q H
Sbjct: 25 RYQNLKPIGSGA-----------QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 122 XXXXXXXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRT 175
+H NI+ L ++SL I++E + ++S ++ M
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSY 130
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG 235
Q+L+G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-------LARTAGTSFMMT 183
Query: 236 ----TPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATG 269
T Y+ APEVI G+ + DIWSVG + EM G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ IG GA+G V + +G +AVK++ + ++ H
Sbjct: 26 PERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 79
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 138
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----GYVATRWY 193
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 31/271 (11%)
Query: 74 IGCGAFGRVYMGMNLD--SGEL---LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G G+FG VY G D GE +AVK V +A+ ++ I
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL------RERIEFLNEASVMKGFT 78
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----------AVMRTYTK 178
H ++VR LG V + + +++E + G + S L P E M
Sbjct: 79 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT-- 236
++ G+ YL+ +HRD+ N +V + +K+ DFG ++ + E T K KG
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 195
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA--ALFHIGTTKSHPP 294
WMAPE ++ + S+D+WS G + E+ + Q YQ ++ + +
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA---EQPYQGLSNEQVLKFVMDGGYLD 252
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+N + D + C + P +RPT E++
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
++ K IG G FG V+ + +G+ +A+K+VL+ + + +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM------ENEKEGFPITALREIKILQ 72
Query: 127 XXSHPNIVRYLGTVREEES--------LNILLEFVP---GGSISSLLGKFGPFPEAVMRT 175
H N+V + R + S + ++ +F G +S++L KF + ++
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL---SEIKR 129
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASK--QVAELATVSGAKSM 233
+ LL GL Y+H + I+HRD+K AN+L+ G +KLADFG ++ +A+ + + +
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 234 KGTPYWMAPEVIR-QTGHSYSADIWSVGCTVIEMATGKP 271
T ++ PE++ + + D+W GC + EM T P
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMAGFVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 40 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 93
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 152
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 207
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMAGFVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 30 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL------SRPFQNQTHAKRAYRELVLMK 83
Query: 127 XXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L ++SL I++E + + + M Q+
Sbjct: 84 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQM 140
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 141 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 193
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + D+WSVGC + EM K
Sbjct: 194 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 127 XXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L ++SL I++E + + + M Q+
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQM 135
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMEPEVVT 188
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + D+WSVGC + EM K
Sbjct: 189 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 41 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 94
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 153
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 208
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 109/273 (39%), Gaps = 28/273 (10%)
Query: 74 IGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPNI 133
+G GAFG+V++ + L K ++ A A K+ H +I
Sbjct: 23 LGEGAFGKVFLA---ECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 134 VRYLGTVREEESLNILLEFVPGGSISSLLGKFGP----------------FPEAVMRTYT 177
V++ G + + L ++ E++ G ++ L GP + M
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQV--AELATVSGAKSMKG 235
Q+ G+ YL + +HRD+ N LV +K+ DFG S+ V + V G +
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML-- 197
Query: 236 TPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQ-QYQEVAALFHIGTTKSHP 293
WM PE I + +D+WS G + E+ T GK PW Q EV G P
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERP 257
Query: 294 PIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
+ + D +L C ++EP R E+ K
Sbjct: 258 RVCPK---EVYDVMLGCWQREPQQRLNIKEIYK 287
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 80
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 139
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 194
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 70
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 129
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 184
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 76
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 135
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT-----GYVATRWY 190
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 67 RWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXX 126
R++ + IG GA G V + +A+K++ + + Q H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL------SRPFQNQTHAKRAYRELVLMK 72
Query: 127 XXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQL 180
+H NI+ L ++SL I++E + + + M Q+
Sbjct: 73 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQM 129
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG----T 236
L G+++LH+ GI+HRD+K +NI+V + +K+ DFG LA +G M T
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 182
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGK 270
Y+ APEVI G+ + D+WSVGC + EM K
Sbjct: 183 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-------KFGPFPEAVMRTYT 177
H N++ L SL EF ++ L+G K + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE---EFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI 131
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
Q+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----GYVATR 186
Query: 238 YWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
++ APE++ H + + DIWSVGC + E+ TG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 29/270 (10%)
Query: 74 IGCGAFGRVYMGMNLD--SGEL---LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G G+FG VY G D GE +AVK V +A+ ++ I
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL------RERIEFLNEASVMKGFT 77
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----------AVMRTYTK 178
H ++VR LG V + + +++E + G + S L P E M
Sbjct: 78 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT-- 236
++ G+ YL+ +HRD+ N +V + +K+ DFG ++ + E T K KG
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 194
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIGTTKSHPPI 295
WMAPE ++ + S+D+WS G + E+ + + P+ E F + +
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM--DGGYLDQ 252
Query: 296 PENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+N + D + C + P +RPT E++
Sbjct: 253 PDNCPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 70
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 129
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ T T ++
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMAGFVATRWY 184
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 80
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 139
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT-----GYVATRWY 194
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL------ 182
SH +V+ G ++ + I+ E++ G + + L E R T+QLL
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVC 115
Query: 183 -GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
+EYL + +HRD+ N LV+++G +K++DFG S+ V + S S K W
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVRWSP 174
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQ-QYQEVAALFHIGTTKSHPPIPENL 299
PEV+ + S +DIW+ G + E+ + GK P+ + E A G P +
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA--- 231
Query: 300 SVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDD 334
S K + C ++ D RPT LL + D+
Sbjct: 232 SEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 266
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 26 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 79
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 138
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----GYVATRWY 193
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KXQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-------KFGPFPEAVMRTYT 177
H N++ L SL EF ++ L+G K + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE---EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
Q+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATR 186
Query: 238 YWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
++ APE++ H + + DIWSVGC + E+ TG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 76
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 135
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 190
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 22/245 (8%)
Query: 131 PNIVRYLGTVREEESL--NILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLH 188
PNIV+ L VR++ S +++ E+V L + + +R Y +LL L+Y H
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 163
Query: 189 NHGIMHRDIKGANILVDNK-GCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPE-VI 245
+ GIMHRD+K N+++D++ ++L D+G +AE +++ + Y+ PE ++
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 219
Query: 246 RQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKD 305
+ YS D+WS+GC M K P+ + L I + L+ K +
Sbjct: 220 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLN-KYR- 277
Query: 306 FLLKCLEKEPDLRPTASELLKHP---FVTGDDEDPVLHASVMKSSEILSPSHVANLESLQ 362
+E +P L + P F+ D++ V ++ ++L H L +L+
Sbjct: 278 -----IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 332
Query: 363 MLTSP 367
+T P
Sbjct: 333 AMTHP 337
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 26 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 79
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 138
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 193
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 20 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 73
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 132
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 187
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 33 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SKPFQSIIHAKRTYRELRL 86
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 145
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 200
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 249 QEDLNXIINLKARNYLL 265
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 41 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 94
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 153
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ T T ++
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMXGXVATRWY 208
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 76
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 135
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 190
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 251 QEDLNCGINLKARNYLL 267
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 76
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 135
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 190
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 32 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 85
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 144
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----GYVATRWY 199
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-------KFGPFPEAVMRTYT 177
H N++ L SL EF ++ L+G K + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE---EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
Q+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T A T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVA-----TR 186
Query: 238 YWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
++ APE++ H + + DIWSVGC + E+ TG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 31/271 (11%)
Query: 74 IGCGAFGRVYMGMNLD--SGEL---LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G G+FG VY G D GE +AVK V +A+ ++ I
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL------RERIEFLNEASVMKGFT 79
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----------AVMRTYTK 178
H ++VR LG V + + +++E + G + S L P E M
Sbjct: 80 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT-- 236
++ G+ YL+ +HR++ N +V + +K+ DFG ++ + E T K KG
Sbjct: 139 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 196
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA--ALFHIGTTKSHPP 294
WMAPE ++ + S+D+WS G + E+ + Q YQ ++ + +
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA---EQPYQGLSNEQVLKFVMDGGYLD 253
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+N + D + C + P++RPT E++
Sbjct: 254 QPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 284
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 31/271 (11%)
Query: 74 IGCGAFGRVYMGMNLD--SGEL---LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G G+FG VY G D GE +AVK V +A+ ++ I
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL------RERIEFLNEASVMKGFT 78
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----------AVMRTYTK 178
H ++VR LG V + + +++E + G + S L P E M
Sbjct: 79 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT-- 236
++ G+ YL+ +HR++ N +V + +K+ DFG ++ + E T K KG
Sbjct: 138 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 195
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA--ALFHIGTTKSHPP 294
WMAPE ++ + S+D+WS G + E+ + Q YQ ++ + +
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA---EQPYQGLSNEQVLKFVMDGGYLD 252
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+N + D + C + P++RPT E++
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 33 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 86
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 145
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 200
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 81
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 140
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 195
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 33 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 86
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 145
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 200
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-------KFGPFPEAVMRTYT 177
H N++ L SL EF ++ L+G K + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE---EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
Q+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATR 186
Query: 238 YWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
++ APE++ H + + DIWSVGC + E+ TG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 18 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 71
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-------KFGPFPEAVMRTYT 177
H N++ L SL EF ++ L+G K + ++
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLE---EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 128
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
Q+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATR 183
Query: 238 YWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
++ APE++ H + + DIWSVGC + E+ TG+
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 127/309 (41%), Gaps = 56/309 (18%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E IG GA+G V +G+ +A+K++ A + + K H
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK------RTLRELKILKHFKHD 114
Query: 132 NIVRYLGTVR------EEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
NI+ +R E +S+ ++L+ + + ++ P +R + QLL GL+
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLLRGLK 173
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-----WM 240
Y+H+ ++HRD+K +N+LV+ +K+ DFG ++ L T T Y +
Sbjct: 174 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARG---LCTSPAEHQYFMTEYVATRWYR 230
Query: 241 APEVIRQTGHSYS--ADIWSVGCTVIEMATGK-----PPWSQQYQEVAALF--------- 284
APE++ H Y+ D+WSVGC EM + + Q Q + +
Sbjct: 231 APELMLSL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 289
Query: 285 ---------HIGTTKSHPPIPENLSVKAKD-----FLLKCLEKEPDLRPTASELLKHPFV 330
+I + P+P D L + L EP R +A+ L+HPF+
Sbjct: 290 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 349
Query: 331 TG----DDE 335
DDE
Sbjct: 350 AKYHDPDDE 358
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 18 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 71
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-------KFGPFPEAVMRTYT 177
H N++ L SL EF ++ L+G K + ++
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLE---EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 128
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
Q+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATR 183
Query: 238 YWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
++ APE++ H + + DIWSVGC + E+ TG+
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 249 QEDLNXIINLKARNYLL 265
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL------ 182
SH +V+ G ++ + I+ E++ G + + L E R T+QLL
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVC 115
Query: 183 -GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMA 241
+EYL + +HRD+ N LV+++G +K++DFG S+ V + + ++ K W
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSRGSKFPVRWSP 174
Query: 242 PEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQ-QYQEVAALFHIGTTKSHPPIPENL 299
PEV+ + S +DIW+ G + E+ + GK P+ + E A G P +
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA--- 231
Query: 300 SVKAKDFLLKCLEKEPDLRPTASELL 325
S K + C ++ D RPT LL
Sbjct: 232 SEKVYTIMYSCWHEKADERPTFKILL 257
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 40 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 93
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 152
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 207
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 32 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 85
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 144
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 199
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 19 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 72
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 131
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 186
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 80
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 139
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 194
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 26 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 79
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-------KFGPFPEAVMRTYT 177
H N++ L SL EF ++ L+G K + ++
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLE---EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
Q+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATR 191
Query: 238 YWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
++ APE++ H + + DIWSVGC + E+ TG+
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 70
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 129
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 184
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 80
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 139
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 194
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KSQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG + + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G G G FG VY G + +AVK++ + ++E Q H
Sbjct: 27 GNKXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQF----DQEIKVXAKCQH 80
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK---QLLLGLEYL 187
N+V LG + + L ++ + P GS+ L P K G+ +L
Sbjct: 81 ENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFL 140
Query: 188 HNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQ 247
H + +HRDIK ANIL+D K++DFG ++ + A + GT + APE +R
Sbjct: 141 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG 200
Query: 248 TGHSYSADIWSVGCTVIEMATGKPPWSQQ 276
+ +DI+S G ++E+ TG P +
Sbjct: 201 EI-TPKSDIYSFGVVLLEIITGLPAVDEH 228
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 41 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 94
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 153
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 208
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 44 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 97
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 156
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ + T T ++
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWY 211
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNIV+ ++ +++E + GG + + K F E ++L+ + ++H+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 190 HGIMHRDIKGANILVDNKGC---IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
G++HRD+K N+L ++ IK+ DFG ++ + K+ T ++ APE++
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR--LKPPDNQPLKTPCFTLHYAAPELLN 182
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQ--------EVAALFHIGTTKSHPPIPEN 298
Q G+ S D+WS+G + M +G+ P+ + E+ G +N
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN 242
Query: 299 LSVKAKDFLLKCLEKEPDLRPTASEL 324
+S +AKD + L +P+ R S L
Sbjct: 243 VSQEAKDLIQGLLTVDPNKRLKMSGL 268
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 44 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 97
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 156
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DFG ++ T T ++
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMXGYVATRWY 211
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 60/305 (19%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQV------LIAANFASKEKAQDHIXXXXXXXXXXX 126
L+G GA+G V + +GE++A+K++ L A + K H
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF----------- 66
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF---GPFPEAVMRTYTKQLLLG 183
H NI+ R + N ++ + + L + + ++ + Q L
Sbjct: 67 --KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELAT--------VSGAKSMKG 235
++ LH ++HRD+K +N+L+++ +K+ DFG ++ + E A SG
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 236 TPYWMAPEVIRQTG-HSYSADIWSVGCTVIEMATGKPPW---SQQYQEVAALFHIGT--- 288
T ++ APEV+ + +S + D+WS GC + E+ +P + ++Q + IGT
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 289 ---------------TKSHPPIPE--------NLSVKAKDFLLKCLEKEPDLRPTASELL 325
KS P P ++ K D L + L +P R TA E L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 326 KHPFV 330
+HP++
Sbjct: 305 EHPYL 309
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 60/305 (19%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQV------LIAANFASKEKAQDHIXXXXXXXXXXX 126
L+G GA+G V + +GE++A+K++ L A + K H
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF----------- 66
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF---GPFPEAVMRTYTKQLLLG 183
H NI+ R + N ++ + + L + + ++ + Q L
Sbjct: 67 --KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELAT--------VSGAKSMKG 235
++ LH ++HRD+K +N+L+++ +K+ DFG ++ + E A SG
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 236 TPYWMAPEVIRQTG-HSYSADIWSVGCTVIEMATGKPPW---SQQYQEVAALFHIGT--- 288
T ++ APEV+ + +S + D+WS GC + E+ +P + ++Q + IGT
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 289 ---------------TKSHPPIPE--------NLSVKAKDFLLKCLEKEPDLRPTASELL 325
KS P P ++ K D L + L +P R TA E L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 326 KHPFV 330
+HP++
Sbjct: 305 EHPYL 309
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 74 IGCGAFGRV----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXS 129
+G G FG V Y + ++G L+AVKQ+ + D
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQL--------QHSGPDQQRDFQREIQILKALH 66
Query: 130 HPNIVRYLGTVRE--EESLNILLEFVPGGSISSLLGKFGPFPEAV-MRTYTKQLLLGLEY 186
IV+Y G L +++E++P G + L + +A + Y+ Q+ G+EY
Sbjct: 67 SDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 126
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP-YWMAPEVI 245
L + +HRD+ NILV+++ +K+ADFG +K + + +P +W APE +
Sbjct: 127 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL 186
Query: 246 RQTGHSYSADIWSVGCTVIEMAT 268
S +D+WS G + E+ T
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 127/309 (41%), Gaps = 56/309 (18%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E IG GA+G V +G+ +A+K++ A + + K H
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK------RTLRELKILKHFKHD 113
Query: 132 NIVRYLGTVR------EEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLE 185
NI+ +R E +S+ ++L+ + + ++ P +R + QLL GL+
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLK 172
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPY-----WM 240
Y+H+ ++HRD+K +N+LV+ +K+ DFG ++ L T T Y +
Sbjct: 173 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARG---LCTSPAEHQYFMTEYVATRWYR 229
Query: 241 APEVIRQTGHSYS--ADIWSVGCTVIEMATGK-----PPWSQQYQEVAALF--------- 284
APE++ H Y+ D+WSVGC EM + + Q Q + +
Sbjct: 230 APELMLSL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288
Query: 285 ---------HIGTTKSHPPIPENLSVKAKD-----FLLKCLEKEPDLRPTASELLKHPFV 330
+I + P+P D L + L EP R +A+ L+HPF+
Sbjct: 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348
Query: 331 TG----DDE 335
DDE
Sbjct: 349 AKYHDPDDE 357
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 60/305 (19%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQV------LIAANFASKEKAQDHIXXXXXXXXXXX 126
L+G GA+G V + +GE++A+K++ L A + K H
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF----------- 66
Query: 127 XXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKF---GPFPEAVMRTYTKQLLLG 183
H NI+ R + N ++ + + L + + ++ + Q L
Sbjct: 67 --KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELAT--------VSGAKSMKG 235
++ LH ++HRD+K +N+L+++ +K+ DFG ++ + E A SG
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 236 TPYWMAPEVIRQTG-HSYSADIWSVGCTVIEMATGKPPW---SQQYQEVAALFHIGT--- 288
T ++ APEV+ + +S + D+WS GC + E+ +P + ++Q + IGT
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 289 ---------------TKSHPPIPE--------NLSVKAKDFLLKCLEKEPDLRPTASELL 325
KS P P ++ K D L + L +P R TA E L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 326 KHPFV 330
+HP++
Sbjct: 305 EHPYL 309
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 30/185 (16%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSG-AKSMK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKPPWSQQY---------------- 277
T ++ APE++ + G++ S DIWSVGC + EM + +P + ++
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 278 -QEVAALFHIGTTKSHPPIPENLSV-----------KAKDFLLKCLEKEPDLRPTASELL 325
+++ + ++ +P V KA D L + L P+ R T E L
Sbjct: 269 QEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEAL 328
Query: 326 KHPFV 330
HP++
Sbjct: 329 AHPYL 333
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 123/285 (43%), Gaps = 50/285 (17%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE---KAQDHIXXXXXXXXXXXXX 128
E IG G FG V+ + G + A+K+ SK+ + D
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKR--------SKKPLAGSVDEQNALREVYAHAVLG 64
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGK----FGPFPEAVMRTYTKQLLLGL 184
H ++VRY E++ + I E+ GGS++ + + F EA ++ Q+ GL
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 185 EYLHNHGIMHRDIKGANILV-------------------DNKGCIKLADFGASKQVAELA 225
Y+H+ ++H DIK +NI + NK K+ D G +
Sbjct: 125 RYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG------HVT 178
Query: 226 TVSGAKSMKGTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP-PWS-QQYQEVAA 282
+S + +G ++A EV+++ H ADI+++ TV+ A +P P + Q+ E+
Sbjct: 179 RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNGDQWHEI-- 236
Query: 283 LFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
P IP+ LS + + L + +P+ RP+A L+KH
Sbjct: 237 -----RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 249 QEDLNCIINLKARNYLL 265
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 253 QEDLNCIINLKARNYLL 269
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 137 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 256
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 257 QEDLNCIINLKARNYLL 273
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 249 QEDLNCIINLKARNYLL 265
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 253 QEDLNCIINLKARNYLL 269
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 251 QEDLNCIINLKARNYLL 267
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 131/348 (37%), Gaps = 100/348 (28%)
Query: 68 WRKGELI----------GCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXX 117
W+KG L+ G G FGRV + ++D+ + AVK V + K + I
Sbjct: 27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILK 86
Query: 118 XXXXXXXXXXXSHPNIVRYLGTVREEESLNILLEFVPGG-SISSLLGK--FGPFPEAVMR 174
V+Y G + + ++ E P G S+ ++ + + F ++
Sbjct: 87 KIQNDDINNNNI----VKYHGKFMYYDHMCLIFE--PLGPSLYEIITRNNYNGFHIEDIK 140
Query: 175 TYTKQLLLGLEYLHNHGIMHRDIKGANILVDN-------------------------KGC 209
Y ++L L YL + H D+K NIL+D+
Sbjct: 141 LYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG 200
Query: 210 IKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATG 269
IKL DFG + ++ S+ T + APEVI G S+D+WS GC + E+ TG
Sbjct: 201 IKLIDFGCATFKSDYHG-----SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
Query: 270 KPPWSQQYQEVAALFHIGTTKS-HPPIPENLSVKAK------------------------ 304
S ++ + H+ +S PIP+N+ +A
Sbjct: 256 ----SLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSI 311
Query: 305 ----------------------DFLLKCLEKEPDLRPTASELLKHPFV 330
DFL L+ +P LRP+ +ELLKH F+
Sbjct: 312 NSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 253 QEDLNCIINLKARNYLL 269
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 40/277 (14%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+++ ELIG G FG+V+ + G+ +K+V + EKA+ +
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKY-----NNEKAEREVKALAKL------ 61
Query: 128 XSHPNIVRYLG----------------TVREEESLNILLEFVPGGSISSLLGKFG--PFP 169
H NIV Y G + + + L I +EF G++ + K
Sbjct: 62 -DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120
Query: 170 EAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSG 229
+ + +Q+ G++Y+H+ +++RD+K +NI + + +K+ DFG V L
Sbjct: 121 KVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL---VTSLKNDGK 177
Query: 230 AKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTT 289
KGT +M+PE I + D++++G + E+ E + F T
Sbjct: 178 RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL----HVCDTAFETSKFF---TD 230
Query: 290 KSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
I + K K L K L K+P+ RP SE+L+
Sbjct: 231 LRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 267
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 253 QEDLNCIINLKARNYLL 269
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 254 QEDLNCIINLKARNYLL 270
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 254
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 255 QEDLNCIINLKARNYLL 271
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 245
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 246 QEDLNCIINLKARNYLL 262
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 253 QEDLNCIINLKARNYLL 269
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 249 QEDLNCIINLKARNYLL 265
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 269 QEDLNCIINLKARNYLL 285
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 246
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 247 QEDLNCIINLKARNYLL 263
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSG-AKSMK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 253 QEDLNCIINLKARNYLL 269
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSG-AKSMK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 254 QEDLNCIINLKARNYLL 270
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I + S
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 251 QEDLNCIINLKARNYLL 267
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 124/296 (41%), Gaps = 49/296 (16%)
Query: 64 PPIRWRKGELIGCGAFGRV-----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXX 118
P R G+ +G GAFG+V Y + D+ +AVK + +A+ +E +
Sbjct: 37 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 96
Query: 119 XXXXXXXXXXSHPNIVRYLG---------TVREEESLNILLEFVPGGSISSLLGKFGPFP 169
+H NIV LG + E LL F+ S + K P
Sbjct: 97 SYLG------NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP-- 148
Query: 170 EAVMR------------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGA 217
A+M +++ Q+ G+ +L + +HRD+ NIL+ + K+ DFG
Sbjct: 149 -AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 207
Query: 218 SKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-------GK 270
++ + + + + WMAPE I +++ +D+WS G + E+ + G
Sbjct: 208 ARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 267
Query: 271 PPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P S+ Y+ + F + + PE+ + D + C + +P RPT ++++
Sbjct: 268 PVDSKFYKMIKEGFRMLS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 124/296 (41%), Gaps = 49/296 (16%)
Query: 64 PPIRWRKGELIGCGAFGRV-----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXX 118
P R G+ +G GAFG+V Y + D+ +AVK + +A+ +E +
Sbjct: 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 80
Query: 119 XXXXXXXXXXSHPNIVRYLG---------TVREEESLNILLEFVPGGSISSLLGKFGPFP 169
+H NIV LG + E LL F+ S + K P
Sbjct: 81 SYLG------NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP-- 132
Query: 170 EAVMR------------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGA 217
A+M +++ Q+ G+ +L + +HRD+ NIL+ + K+ DFG
Sbjct: 133 -AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 191
Query: 218 SKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-------GK 270
++ + + + + WMAPE I +++ +D+WS G + E+ + G
Sbjct: 192 ARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251
Query: 271 PPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P S+ Y+ + F + + PE+ + D + C + +P RPT ++++
Sbjct: 252 PVDSKFYKMIKEGFRMLS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ D+G ++ + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 124/296 (41%), Gaps = 49/296 (16%)
Query: 64 PPIRWRKGELIGCGAFGRV-----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXX 118
P R G+ +G GAFG+V Y + D+ +AVK + +A+ +E +
Sbjct: 44 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 103
Query: 119 XXXXXXXXXXSHPNIVRYLG---------TVREEESLNILLEFVPGGSISSLLGKFGPFP 169
+H NIV LG + E LL F+ S + K P
Sbjct: 104 SYLG------NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP-- 155
Query: 170 EAVMR------------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGA 217
A+M +++ Q+ G+ +L + +HRD+ NIL+ + K+ DFG
Sbjct: 156 -AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 214
Query: 218 SKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-------GK 270
++ + + + + WMAPE I +++ +D+WS G + E+ + G
Sbjct: 215 ARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 274
Query: 271 PPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P S+ Y+ + F + + PE+ + D + C + +P RPT ++++
Sbjct: 275 PVDSKFYKMIKEGFRMLS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 124/296 (41%), Gaps = 49/296 (16%)
Query: 64 PPIRWRKGELIGCGAFGRV-----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXX 118
P R G+ +G GAFG+V Y + D+ +AVK + +A+ +E +
Sbjct: 44 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 103
Query: 119 XXXXXXXXXXSHPNIVRYLG---------TVREEESLNILLEFVPGGSISSLLGKFGPFP 169
+H NIV LG + E LL F+ S + K P
Sbjct: 104 SYLG------NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP-- 155
Query: 170 EAVMR------------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGA 217
A+M +++ Q+ G+ +L + +HRD+ NIL+ + K+ DFG
Sbjct: 156 -AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 214
Query: 218 SKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-------GK 270
++ + + + + WMAPE I +++ +D+WS G + E+ + G
Sbjct: 215 ARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 274
Query: 271 PPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P S+ Y+ + F + + PE+ + D + C + +P RPT ++++
Sbjct: 275 PVDSKFYKMIKEGFRMLS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 29/217 (13%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPF------------------PEA 171
HPN+V LG V +++ L+++ + G + L P P+
Sbjct: 88 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 147
Query: 172 VMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQV--AELATVSG 229
V Q+ G+EYL +H ++H+D+ N+LV +K +K++D G ++V A+ + G
Sbjct: 148 V--HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 205
Query: 230 AKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW-SQQYQEVAALFHIG 287
+ WMAPE I S +DIWS G + E+ + G P+ Q+V +
Sbjct: 206 NSLLPIR--WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI--- 260
Query: 288 TTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASEL 324
+ P P++ +++C + P RP ++
Sbjct: 261 RNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 29/217 (13%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPF------------------PEA 171
HPN+V LG V +++ L+++ + G + L P P+
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 172 VMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQV--AELATVSG 229
V Q+ G+EYL +H ++H+D+ N+LV +K +K++D G ++V A+ + G
Sbjct: 131 V--HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 230 AKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW-SQQYQEVAALFHIG 287
+ WMAPE I S +DIWS G + E+ + G P+ Q+V +
Sbjct: 189 NSLLPIR--WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI--- 243
Query: 288 TTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASEL 324
+ P P++ +++C + P RP ++
Sbjct: 244 RNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 52/286 (18%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE---KAQDHIXXXXXXXXXXXXX 128
E IG G FG V+ + G + A+K+ SK+ + D
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKR--------SKKPLAGSVDEQNALREVYAHAVLG 66
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGK----FGPFPEAVMRTYTKQLLLGL 184
H ++VRY E++ + I E+ GGS++ + + F EA ++ Q+ GL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 185 EYLHNHGIMHRDIKGANILV-------------------DNKGCIKLADFGASKQVAELA 225
Y+H+ ++H DIK +NI + NK K+ D G +
Sbjct: 127 RYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG------HVT 180
Query: 226 TVSGAKSMKGTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKPPW---SQQYQEVA 281
+S + +G ++A EV+++ H ADI+++ TV+ A G P Q+ E+
Sbjct: 181 RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEI- 238
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
P IP+ LS + + L + +P+ RP+A L+KH
Sbjct: 239 ------RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 124/296 (41%), Gaps = 49/296 (16%)
Query: 64 PPIRWRKGELIGCGAFGRV-----YMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXX 118
P R G+ +G GAFG+V Y + D+ +AVK + +A+ +E +
Sbjct: 39 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 98
Query: 119 XXXXXXXXXXSHPNIVRYLG---------TVREEESLNILLEFVPGGSISSLLGKFGPFP 169
+H NIV LG + E LL F+ S + K P
Sbjct: 99 SYLG------NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP-- 150
Query: 170 EAVMR------------TYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGA 217
A+M +++ Q+ G+ +L + +HRD+ NIL+ + K+ DFG
Sbjct: 151 -AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 209
Query: 218 SKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-------GK 270
++ + + + + WMAPE I +++ +D+WS G + E+ + G
Sbjct: 210 ARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 269
Query: 271 PPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
P S+ Y+ + F + + PE+ + D + C + +P RPT ++++
Sbjct: 270 PVDSKFYKMIKEGFRMLS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ DF ++ + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 52/286 (18%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE---KAQDHIXXXXXXXXXXXXX 128
E IG G FG V+ + G + A+K+ SK+ + D
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKR--------SKKPLAGSVDEQNALREVYAHAVLG 66
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGK----FGPFPEAVMRTYTKQLLLGL 184
H ++VRY E++ + I E+ GGS++ + + F EA ++ Q+ GL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 185 EYLHNHGIMHRDIKGANILV-------------------DNKGCIKLADFGASKQVAELA 225
Y+H+ ++H DIK +NI + NK K+ D G +
Sbjct: 127 RYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG------HVT 180
Query: 226 TVSGAKSMKGTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKPPW---SQQYQEVA 281
+S + +G ++A EV+++ H ADI+++ TV+ A G P Q+ E+
Sbjct: 181 RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEI- 238
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
P IP+ LS + + L + +P+ RP+A L+KH
Sbjct: 239 ------RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 52/286 (18%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKE---KAQDHIXXXXXXXXXXXXX 128
E IG G FG V+ + G + A+K+ SK+ + D
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKR--------SKKPLAGSVDEQNALREVYAHAVLG 68
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGK----FGPFPEAVMRTYTKQLLLGL 184
H ++VRY E++ + I E+ GGS++ + + F EA ++ Q+ GL
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 185 EYLHNHGIMHRDIKGANILV-------------------DNKGCIKLADFGASKQVAELA 225
Y+H+ ++H DIK +NI + NK K+ D G +
Sbjct: 129 RYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG------HVT 182
Query: 226 TVSGAKSMKGTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKPPW---SQQYQEVA 281
+S + +G ++A EV+++ H ADI+++ TV+ A G P Q+ E+
Sbjct: 183 RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEI- 240
Query: 282 ALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
P IP+ LS + + L + +P+ RP+A L+KH
Sbjct: 241 ------RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G FG V+MG + +AVK + + A+ ++ H
Sbjct: 27 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---------QHQ 76
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLLGLE 185
+VR L V +E + I+ E++ GS+ L P + T K Q+ G+
Sbjct: 77 RLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAEGMA 131
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAP 242
++ +HRD++ ANILV + K+ADFG ++ + E GAK +K W AP
Sbjct: 132 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK----WTAP 187
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
E I + +D+WS G + E+ T G+ P+ EV G P+N
Sbjct: 188 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCP 244
Query: 301 VKAKDFLLKCLEKEPDLRPTASEL 324
+ + C ++ P+ RPT L
Sbjct: 245 EELYQLMRLCWKERPEDRPTFDYL 268
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G FG V+MG + +AVK + + A+ ++ H
Sbjct: 24 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---------QHQ 73
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLLGLE 185
+VR L V +E + I+ E++ GS+ L P + T K Q+ G+
Sbjct: 74 RLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAEGMA 128
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAP 242
++ +HRD++ ANILV + K+ADFG ++ + E GAK +K W AP
Sbjct: 129 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK----WTAP 184
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
E I + +D+WS G + E+ T G+ P+ EV G P+N
Sbjct: 185 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCP 241
Query: 301 VKAKDFLLKCLEKEPDLRPTASEL 324
+ + C ++ P+ RPT L
Sbjct: 242 EELYQLMRLCWKERPEDRPTFDYL 265
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G FG V+MG + +AVK + + A+ ++ H
Sbjct: 29 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---------QHQ 78
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLLGLE 185
+VR L V +E + I+ E++ GS+ L P + T K Q+ G+
Sbjct: 79 RLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAEGMA 133
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAP 242
++ +HRD++ ANILV + K+ADFG ++ + E GAK +K W AP
Sbjct: 134 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK----WTAP 189
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
E I + +D+WS G + E+ T G+ P+ EV G P+N
Sbjct: 190 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCP 246
Query: 301 VKAKDFLLKCLEKEPDLRPTASEL 324
+ + C ++ P+ RPT L
Sbjct: 247 EELYQLMRLCWKERPEDRPTFDYL 270
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 111/261 (42%), Gaps = 27/261 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G FG V+MG + +AVK + + A+ ++ H
Sbjct: 28 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---------QHQ 77
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLLGLE 185
+VR L V +E + I+ E++ GS+ L P + T K Q+ G+
Sbjct: 78 RLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAEGMA 132
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
++ +HRD++ ANILV + K+ADFG ++ + E + + K W APE I
Sbjct: 133 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAI 191
Query: 246 RQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLSVKA 303
+ +D+WS G + E+ T G+ P+ EV G P+N +
Sbjct: 192 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCPEEL 248
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
+ C ++ P+ RPT L
Sbjct: 249 YQLMRLCWKERPEDRPTFDYL 269
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 8/202 (3%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R T + + +++E GG + + F E+ K +L + Y H
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 124
Query: 190 HGIMHRDIKGANILVDN---KGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
+ HRD+K N L +KL DFG + A ++ GTPY+++P+V+
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA---ARFKPGKMMRTKVGTPYYVSPQVL- 180
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLSVKAKD 305
+ + D WS G + + G PP+S EV GT N+S +A+
Sbjct: 181 EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAES 240
Query: 306 FLLKCLEKEPDLRPTASELLKH 327
+ + L K P R T+ + L+H
Sbjct: 241 LIRRLLTKSPKQRITSLQALEH 262
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G FG V+MG + +AVK + + A+ ++ H
Sbjct: 25 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---------QHQ 74
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLLGLE 185
+VR L V +E + I+ E++ GS+ L P + T K Q+ G+
Sbjct: 75 RLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAEGMA 129
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAP 242
++ +HRD++ ANILV + K+ADFG ++ + E GAK +K W AP
Sbjct: 130 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK----WTAP 185
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
E I + +D+WS G + E+ T G+ P+ EV G P+N
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCP 242
Query: 301 VKAKDFLLKCLEKEPDLRPTASEL 324
+ + C ++ P+ RPT L
Sbjct: 243 EELYQLMRLCWKERPEDRPTFDYL 266
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 8/202 (3%)
Query: 130 HPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
HPNI+R T + + +++E GG + + F E+ K +L + Y H
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 141
Query: 190 HGIMHRDIKGANILVDN---KGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
+ HRD+K N L +KL DFG + A ++ GTPY+++P+V+
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA---ARFKPGKMMRTKVGTPYYVSPQVL- 197
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLSVKAKD 305
+ + D WS G + + G PP+S EV GT N+S +A+
Sbjct: 198 EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAES 257
Query: 306 FLLKCLEKEPDLRPTASELLKH 327
+ + L K P R T+ + L+H
Sbjct: 258 LIRRLLTKSPKQRITSLQALEH 279
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G FG V+MG + +AVK + + A+ ++ H
Sbjct: 25 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---------QHQ 74
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLLGLE 185
+VR L V +E + I+ E++ GS+ L P + T K Q+ G+
Sbjct: 75 RLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAEGMA 129
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAP 242
++ +HRD++ ANILV + K+ADFG ++ + E GAK +K W AP
Sbjct: 130 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK----WTAP 185
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
E I + +D+WS G + E+ T G+ P+ EV G P+N
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCP 242
Query: 301 VKAKDFLLKCLEKEPDLRPTASEL 324
+ + C ++ P+ RPT L
Sbjct: 243 EELYQLMRLCWKERPEDRPTFDYL 266
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G FG V+MG + +AVK + + A+ ++ H
Sbjct: 19 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---------QHQ 68
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLLGLE 185
+VR L V +E + I+ E++ GS+ L P + T K Q+ G+
Sbjct: 69 RLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAEGMA 123
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAP 242
++ +HRD++ ANILV + K+ADFG ++ + E GAK +K W AP
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK----WTAP 179
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
E I + +D+WS G + E+ T G+ P+ EV G P+N
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCP 236
Query: 301 VKAKDFLLKCLEKEPDLRPTASEL 324
+ + C ++ P+ RPT L
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYL 260
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKS-MK 234
+ Q+L GL+Y+H+ ++HRD+K +N+L++ +K+ DFG ++ +G +
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 235 GTPYWMAPEVIRQT-GHSYSADIWSVGCTVIEMATGKP--PWSQQYQEVAALFHIGTTKS 291
T ++ APE++ + G++ S DIWSVGC + EM + +P P ++ + I +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPE 246
Query: 292 HPPIPENLSVKAKDFLL 308
+ +++KA+++LL
Sbjct: 247 QEDLNCIINLKARNYLL 263
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G FG V+MG + +AVK + + A+ ++ H
Sbjct: 19 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---------QHQ 68
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLLGLE 185
+VR L V +E + I+ E++ GS+ L P + T K Q+ G+
Sbjct: 69 RLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAEGMA 123
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAP 242
++ +HRD++ ANILV + K+ADFG ++ + E GAK +K W AP
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK----WTAP 179
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
E I + +D+WS G + E+ T G+ P+ EV G P+N
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCP 236
Query: 301 VKAKDFLLKCLEKEPDLRPTASEL 324
+ + C ++ P+ RPT L
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYL 260
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKF---- 91
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + ILLE + GG + S L + P P + + +
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ + +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 269
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 270 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 310
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 111/261 (42%), Gaps = 27/261 (10%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G FG V+MG + +AVK + + A+ ++ H
Sbjct: 21 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---------QHQ 70
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLLGLE 185
+VR L V +E + I+ E++ GS+ L P + T K Q+ G+
Sbjct: 71 RLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAEGMA 125
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
++ +HRD++ ANILV + K+ADFG ++ + E + + K W APE I
Sbjct: 126 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAI 184
Query: 246 RQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLSVKA 303
+ +D+WS G + E+ T G+ P+ EV G P+N +
Sbjct: 185 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCPEEL 241
Query: 304 KDFLLKCLEKEPDLRPTASEL 324
+ C ++ P+ RPT L
Sbjct: 242 YQLMRLCWKERPEDRPTFDYL 262
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKL---- 91
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + ILLE + GG + S L + P P + + +
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ + +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 269
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 270 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 310
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG 235
Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + + +
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 236 TPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVAALFHIGTTKSH 292
WMAPE I ++ +D+WS G + E+ + G P+ + +E GT
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR- 321
Query: 293 PPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
P+ + + +L C EP RPT SEL++H
Sbjct: 322 --APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG 235
Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + + +
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 236 TPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVAALFHIGTTKSH 292
WMAPE I ++ +D+WS G + E+ + G P+ + +E GT
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR- 323
Query: 293 PPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
P+ + + +L C EP RPT SEL++H
Sbjct: 324 --APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKF---- 97
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + ILLE + GG + S L + P P + + +
Sbjct: 98 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 157
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ + +
Sbjct: 158 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 275
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 276 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 316
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G FG V+MG + +AVK + + A+ ++ H
Sbjct: 19 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---------QHQ 68
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLLGLE 185
+VR L V +E + I+ E++ GS+ L P + T K Q+ G+
Sbjct: 69 RLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAEGMA 123
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAP 242
++ +HRD++ ANILV + K+ADFG ++ + E GAK +K W AP
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK----WTAP 179
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
E I + +D+WS G + E+ T G+ P+ EV G P+N
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCP 236
Query: 301 VKAKDFLLKCLEKEPDLRPTASEL 324
+ + C ++ P+ RPT L
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYL 260
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 118/290 (40%), Gaps = 53/290 (18%)
Query: 68 WRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXX 127
+++ ELIG G FG+V+ + G+ +++V + EKA+ +
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK-----YNNEKAEREVKALAKL------ 62
Query: 128 XSHPNIVRYLG-----------------------------TVREEESLNILLEFVPGGSI 158
H NIV Y G + + + L I +EF G++
Sbjct: 63 -DHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL 121
Query: 159 SSLLGKFG--PFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFG 216
+ K + + +Q+ G++Y+H+ ++HRD+K +NI + + +K+ DFG
Sbjct: 122 EQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 217 ASKQVAELATVSGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQ 276
V L KGT +M+PE I + D++++G + E+
Sbjct: 182 L---VTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL----HVCDT 234
Query: 277 YQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLK 326
E + F T I + K K L K L K+P+ RP SE+L+
Sbjct: 235 AFETSKFF---TDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 281
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G FG V+MG + +AVK + + A+ ++ H
Sbjct: 14 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---------QHQ 63
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLLGLE 185
+VR L V +E + I+ E++ GS+ L P + T K Q+ G+
Sbjct: 64 RLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAEGMA 118
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAP 242
++ +HRD++ ANILV + K+ADFG ++ + E GAK +K W AP
Sbjct: 119 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK----WTAP 174
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
E I + +D+WS G + E+ T G+ P+ EV G P+N
Sbjct: 175 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCP 231
Query: 301 VKAKDFLLKCLEKEPDLRPTASEL 324
+ + C ++ P+ RPT L
Sbjct: 232 EELYQLMRLCWKERPEDRPTFDYL 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKF---- 82
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + ILLE + GG + S L + P P + + +
Sbjct: 83 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 142
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ + +
Sbjct: 143 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 202
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 260
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 261 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 301
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G FG V+MG + +AVK + + A+ ++ H
Sbjct: 20 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---------QHQ 69
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLLGLE 185
+VR L V +E + I+ E++ GS+ L P + T K Q+ G+
Sbjct: 70 RLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAEGMA 124
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAP 242
++ +HRD++ ANILV + K+ADFG ++ + E GAK +K W AP
Sbjct: 125 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK----WTAP 180
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
E I + +D+WS G + E+ T G+ P+ EV G P+N
Sbjct: 181 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCP 237
Query: 301 VKAKDFLLKCLEKEPDLRPTASEL 324
+ + C ++ P+ RPT L
Sbjct: 238 EELYQLMRLCWKERPEDRPTFDYL 261
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG 235
Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + + +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 236 TPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVAALFHIGTTKSH 292
WMAPE I ++ +D+WS G + E+ + G P+ + +E GT
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR- 316
Query: 293 PPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
P+ + + +L C EP RPT SEL++H
Sbjct: 317 --APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ FG ++ + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKF---- 90
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + ILLE + GG + S L + P P + + +
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ + +
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 268
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 269 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 309
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 176 YTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKG 235
Y+ Q+ G+E+L + +HRD+ NIL+ K +K+ DFG ++ + + +
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 236 TPYWMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW--SQQYQEVAALFHIGTTKSH 292
WMAPE I ++ +D+WS G + E+ + G P+ + +E GT
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 315
Query: 293 P--PIPENLSVKAKDFLLKCLEKEPDLRPTASELLKH 327
P PE +L C EP RPT SEL++H
Sbjct: 316 PDYTTPEMYQT-----MLDCWHGEPSQRPTFSELVEH 347
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 57/244 (23%)
Query: 130 HPNIVRYLGTVREEESLNILLEF--------VPGGSIS----SLLGKFGPFPEAVMRTYT 177
HPN++RY + + L I LE V ++S L ++ P +
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI------SLL 121
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKG-------------CIKLADFGASKQVAEL 224
+Q+ G+ +LH+ I+HRD+K NILV I ++DFG K++
Sbjct: 122 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD-- 179
Query: 225 ATVSGAKSMK-------GTPYWMAPEVIRQTGH-------SYSADIWSVGCTVIE-MATG 269
SG S + GT W APE++ ++ + + S DI+S+GC ++ G
Sbjct: 180 ---SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 270 KPPWSQQYQE----VAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
K P+ +Y + +F + K +L +A D + + ++ +P RPTA ++L
Sbjct: 237 KHPFGDKYSRESNIIRGIFSLDEMKCLH--DRSLIAEATDLISQMIDHDPLKRPTAMKVL 294
Query: 326 KHPF 329
+HP
Sbjct: 295 RHPL 298
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKF---- 91
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + ILLE + GG + S L + P P + + +
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ + +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 269
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 270 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 310
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKF---- 117
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + ILLE + GG + S L + P P + + +
Sbjct: 118 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 177
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ + +
Sbjct: 178 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 237
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 295
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 296 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 336
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKL---- 105
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + ILLE + GG + S L + P P + + +
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ + +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 283
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 284 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 324
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 110/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKF---- 108
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + ILLE + GG + S L + P P + + +
Sbjct: 109 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 168
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ +
Sbjct: 169 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 286
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 287 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 327
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 110/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKF---- 131
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + ILLE + GG + S L + P P + + +
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 191
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ +
Sbjct: 192 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 309
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 310 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 350
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 43/235 (18%)
Query: 130 HPNIVRYLGTVREEESLNILLEF--------VPGGSIS----SLLGKFGPFPEAVMRTYT 177
HPN++RY + + L I LE V ++S L ++ P +
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI------SLL 139
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKG-------------CIKLADFGASKQV--A 222
+Q+ G+ +LH+ I+HRD+K NILV I ++DFG K++
Sbjct: 140 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 223 ELATVSGAKSMKGTPYWMAPEVIRQTGH---SYSADIWSVGCTVIE-MATGKPPWSQQYQ 278
+ + GT W APE++ ++ + S DI+S+GC ++ GK P+ +Y
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 259
Query: 279 E----VAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
+ +F + K +L +A D + + ++ +P RPTA ++L+HP
Sbjct: 260 RESNIIRGIFSLDEMKCLH--DRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 312
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKF---- 107
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + ILLE + GG + S L + P P + + +
Sbjct: 108 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 167
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ + +
Sbjct: 168 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 227
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 285
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 286 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 326
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ D G ++ + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 22/214 (10%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLG-------KFGPFPEAVMRTYT 177
H N++ L SL EF ++ L+G K + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE---EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTP 237
Q+L GL+Y+H+ I+HRD+K +N+ V+ +K+ D G ++ + T T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMT-----GYVATR 186
Query: 238 YWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
++ APE++ H + + DIWSVGC + E+ TG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLL 182
H +VR L V +E + I+ E++ GS+ L P + T K Q+
Sbjct: 66 QHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAE 120
Query: 183 GLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAP 242
G+ ++ +HRD++ ANILV + K+ADFG ++ + E A + + K W AP
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDAEXTAREGAKFPIKWTAP 179
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
E I + +D+WS G + E+ T G+ P+ EV G P+N
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCP 236
Query: 301 VKAKDFLLKCLEKEPDLRPTASEL 324
+ + C ++ P+ RPT L
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYL 260
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 43/235 (18%)
Query: 130 HPNIVRYLGTVREEESLNILLEF--------VPGGSIS----SLLGKFGPFPEAVMRTYT 177
HPN++RY + + L I LE V ++S L ++ P +
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI------SLL 139
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKG-------------CIKLADFGASKQV--A 222
+Q+ G+ +LH+ I+HRD+K NILV I ++DFG K++
Sbjct: 140 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 223 ELATVSGAKSMKGTPYWMAPEVIRQTGH---SYSADIWSVGCTVIE-MATGKPPWSQQYQ 278
+ + GT W APE++ ++ + S DI+S+GC ++ GK P+ +Y
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 259
Query: 279 E----VAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
+ +F + K +L +A D + + ++ +P RPTA ++L+HP
Sbjct: 260 RESNIIRGIFSLDEMKCLH--DRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 312
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKF---- 90
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + IL+E + GG + S L + P P + + +
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ + +
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 268
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 269 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 309
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 124/297 (41%), Gaps = 43/297 (14%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
++G GAFG+V N A+K++ ++ + +H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI---------RHTEEKLSTILSEVXLLASLNHQY 63
Query: 133 IVRYLGT-------------VREEESLNILLEFVPGGSISSLLG--KFGPFPEAVMRTYT 177
+VRY V+++ +L I E+ ++ L+ + R +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF- 122
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATV---------- 227
+Q+L L Y+H+ GI+HR++K NI +D +K+ DFG +K V +
Sbjct: 123 RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 228 --SGAKSMKGTPYWMAPEVIRQTGH-SYSADIWSVGCTVIEMATGKPPWSQQYQEVAALF 284
S GT ++A EV+ TGH + D +S+G E P+S + V L
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILK 239
Query: 285 HI-GTTKSHPPIPENLSVKAKDFLLKCL-EKEPDLRPTASELLKHPFVTGDDEDPVL 339
+ + PP ++ K + +++ L + +P+ RP A LL ++ +D V+
Sbjct: 240 KLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVI 296
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 73 LIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHPN 132
++G G FG+VY G L G L+AVK++ +E+ Q H N
Sbjct: 45 ILGRGGFGKVYKG-RLADGTLVAVKRL-------KEERXQGGELQFQTEVEMISMAVHRN 96
Query: 133 IVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLL-----GLEYL 187
++R G ++ ++ GS++S L + P + + +Q + GL YL
Sbjct: 97 LLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPESQPPLDWPKRQRIALGSARGLAYL 155
Query: 188 HNH---GIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
H+H I+HRD+K ANIL+D + + DFG +K + + +++GT +APE
Sbjct: 156 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDXHVXXAVRGTIGHIAPEY 214
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGK 270
+ S D++ G ++E+ TG+
Sbjct: 215 LSTGKSSEKTDVFGYGVMLLELITGQ 240
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVYSEQDELDFLMEALIISKF---- 105
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + ILLE + GG + S L + P P + + +
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ + +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 283
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 284 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 324
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXX 124
P R++ +G GA+G V + +G +AVK++ + ++ H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 125 XXXXSHPNIVRYLGTV---REEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQ 179
H N++ L R E N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 180 LLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYW 239
+L GL+Y+H+ I+HRD+K +N+ V+ +K+ D G ++ + T T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMT-----GYVATRWY 188
Query: 240 MAPEVIRQTGH-SYSADIWSVGCTVIEMATGK 270
APE++ H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 74 IGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G GAFG VY GM D L +AVK + S++ D +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKF---- 105
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAV-------MRTYTKQLL 181
+H NIVR +G + IL+E + GG + S L + P P + + +
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 182 LGLEYLHNHGIMHRDIKGANILVDNKG---CIKLADFGASKQVAELATVSGAKSMKGTPY 238
G +YL + +HRDI N L+ G K+ DFG ++ + +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 239 WMAPEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPWSQQYQEVAALFHIGTTKSHPPIPE 297
WM PE + + D WS G + E+ + G P+ + + F + P P+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PK 283
Query: 298 NLSVKAKDFLLKCLEKEPDLRPTASELLKHPFVTGDDEDPV 338
N + +C + +P+ RP + +L+ D D +
Sbjct: 284 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 324
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 47/239 (19%)
Query: 130 HPNIVRYLGTVREEESLNILLEF--------VPGGSIS----SLLGKFGPFPEAVMRTYT 177
HPN++RY + + L I LE V ++S L ++ P +
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI------SLL 121
Query: 178 KQLLLGLEYLHNHGIMHRDIKGANILVDNKG-------------CIKLADFGASKQV--A 222
+Q+ G+ +LH+ I+HRD+K NILV I ++DFG K++
Sbjct: 122 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 223 ELATVSGAKSMKGTPYWMAPEVIRQTGH-------SYSADIWSVGCTVIE-MATGKPPWS 274
+ + GT W APE++ ++ + + S DI+S+GC ++ GK P+
Sbjct: 182 QXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
Query: 275 QQYQE----VAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
+Y + +F + K +L +A D + + ++ +P RPTA ++L+HP
Sbjct: 242 DKYSRESNIIRGIFSLDEMKCLH--DRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
E +G G FG V+MG + +AVK + + A+ ++ H
Sbjct: 15 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---------QHQ 64
Query: 132 NIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTK------QLLLGLE 185
+VR L V +E + I+ E++ GS+ L P + T K Q+ G+
Sbjct: 65 RLVR-LYAVVTQEPIYIITEYMENGSLVDFLKT----PSGIKLTINKLLDMAAQIAEGMA 119
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVA--ELATVSGAKS-MKGTPYWMAP 242
++ +HR+++ ANILV + K+ADFG ++ + E GAK +K W AP
Sbjct: 120 FIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK----WTAP 175
Query: 243 EVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQ-EVAALFHIGTTKSHPPIPENLS 300
E I + +D+WS G + E+ T G+ P+ EV G P+N
Sbjct: 176 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCP 232
Query: 301 VKAKDFLLKCLEKEPDLRPTASEL 324
+ + C ++ P+ RPT L
Sbjct: 233 EELYQLMRLCWKERPEDRPTFDYL 256
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 39/286 (13%)
Query: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXX 125
+R R ++ G F VY ++ SG A+K++L +N K +A
Sbjct: 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLL--SNEEEKNRA-----IIQEVCFMK 80
Query: 126 XXXSHPNIVRYL--GTVREEESLN-----ILLEFVPGGSISSLLGKF---GPFP-EAVMR 174
HPNIV++ ++ +EES +LL + G + L K GP + V++
Sbjct: 81 KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLK 140
Query: 175 TYTKQLLLGLEYLHNHG--IMHRDIKGANILVDNKGCIKLADFGASKQVAEL-------- 224
+ Q ++++H I+HRD+K N+L+ N+G IKL DFG++ ++
Sbjct: 141 IFY-QTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQ 199
Query: 225 --ATVSGAKSMKGTPYWMAPEVIRQTGH---SYSADIWSVGCTVIEMATGKPPWSQQYQE 279
A V + TP + PE+I + DIW++GC + + + P +++
Sbjct: 200 RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP----FED 255
Query: 280 VAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
A L + S PP +V + L+ P+ R + +E++
Sbjct: 256 GAKLRIVNGKYSIPPHDTQYTV-FHSLIRAMLQVNPEERLSIAEVV 300
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 126/298 (42%), Gaps = 27/298 (9%)
Query: 62 MSPPIRWRKGELIGCGAFGRVYMG-MNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXX 120
+ P ++ G ++G G FG V + + G + V ++ A+ + ++ +
Sbjct: 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAAC 78
Query: 121 XXXXXXXXSHPNIVRYLGTVREEESLN------ILLEFVPGGSISSLL--GKFG--PF-- 168
HP++ + +G + ++L F+ G + + L + G PF
Sbjct: 79 MKEF----DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 169 PEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVS 228
P + + + G+EYL + +HRD+ N ++ + +ADFG S+++
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR 194
Query: 229 GAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMAT-GKPPWSQQYQEVAALFHIG 287
+ K W+A E + ++ +D+W+ G T+ E+ T G+ P++ + IG
Sbjct: 195 QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG 254
Query: 288 TTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTAS-------ELLKHPFVTGDDEDPV 338
+ P PE + + D + +C +P RP+ + +L H V +DP+
Sbjct: 255 GNRLKQP-PECME-EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPL 310
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 130 HPNIVRYLGTVREEES-LNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEY 186
H N+V+ LG + EE+ L I+ E++ GS+ L G + ++ + +EY
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 123
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + +HRD+ N+LV K++DFG +K+ + S + K W APE +R
Sbjct: 124 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-----STQDTGKLPVKWTAPEALR 178
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPW 273
+ S +D+WS G + E+ + G+ P+
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 31/271 (11%)
Query: 74 IGCGAFGRVYMGMNL----DSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G G+FG VY G+ D E +A+K V AA+ ++ I
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------RERIEFLNEASVMKEFN 71
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----------AVMRTYTK 178
H ++VR LG V + + +++E + G + S L P E + M
Sbjct: 72 CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 130
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT-- 236
++ G+ YL+ + +HRD+ N +V +K+ DFG ++ + E T K KG
Sbjct: 131 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE--TDXXRKGGKGLLP 188
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA--ALFHIGTTKSHPP 294
WM+PE ++ + +D+WS G + E+AT Q YQ ++ +
Sbjct: 189 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA---EQPYQGLSNEQVLRFVMEGGLLD 245
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+N + + C + P +RP+ E++
Sbjct: 246 KPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 31/271 (11%)
Query: 74 IGCGAFGRVYMGMNL----DSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G G+FG VY G+ D E +A+K V AA+ ++ I
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------RERIEFLNEASVMKEFN 80
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----------AVMRTYTK 178
H ++VR LG V + + +++E + G + S L P E + M
Sbjct: 81 CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 139
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT-- 236
++ G+ YL+ + +HRD+ N +V +K+ DFG ++ + E T K KG
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE--TDXXRKGGKGLLP 197
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA--ALFHIGTTKSHPP 294
WM+PE ++ + +D+WS G + E+AT Q YQ ++ +
Sbjct: 198 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA---EQPYQGLSNEQVLRFVMEGGLLD 254
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+N + + C + P +RP+ E++
Sbjct: 255 KPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 47/238 (19%)
Query: 132 NIVRYLGTVREEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
NI++ + TV++ S ++ E++ L F +R Y +LL L+Y H+
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD---IRFYMYELLKALDYCHS 150
Query: 190 HGIMHRDIKGANILVDN-KGCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPE-VIR 246
GIMHRD+K N+++D+ + ++L D+G +AE + +++ + Y+ PE ++
Sbjct: 151 KGIMHRDVKPHNVMIDHQQKKLRLIDWG----LAEFYHPAQEYNVRVASRYFKGPELLVD 206
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPW---SQQYQEVAAL---------------FHIGT 288
+ YS D+WS+GC + M + P+ Y ++ + +HI
Sbjct: 207 YQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDL 266
Query: 289 TKSHPPI--------------PEN---LSVKAKDFLLKCLEKEPDLRPTASELLKHPF 329
I EN +S +A D L K L + R TA E ++HP+
Sbjct: 267 DPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 324
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 15/153 (9%)
Query: 130 HPNIVRYLGTVREEESLN-----ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGL 184
HP+IV+ V + I++E+V G S+ G+ P EA+ Y ++L L
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAI--AYLLEILPAL 195
Query: 185 EYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEV 244
YLH+ G+++ D+K NI++ + +KL D GA ++ + GTP + APE+
Sbjct: 196 SYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFG------YLYGTPGFQAPEI 248
Query: 245 IRQTGHSYSADIWSVGCTVIEMATGKPPWSQQY 277
+R TG + + DI++VG T+ + P + +Y
Sbjct: 249 VR-TGPTVATDIYTVGRTLAALTLDLPTRNGRY 280
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 31/271 (11%)
Query: 74 IGCGAFGRVYMGMNL----DSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G G+FG VY G+ D E +A+K V AA+ ++ I
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------RERIEFLNEASVMKEFN 86
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----------AVMRTYTK 178
H ++VR LG V + + +++E + G + S L P E + M
Sbjct: 87 CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 145
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT-- 236
++ G+ YL+ + +HRD+ N +V +K+ DFG ++ + E T K KG
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 203
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA--ALFHIGTTKSHPP 294
WM+PE ++ + +D+WS G + E+AT Q YQ ++ +
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA---EQPYQGLSNEQVLRFVMEGGLLD 260
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+N + + C + P +RP+ E++
Sbjct: 261 KPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 27/209 (12%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQV---LIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+ IG G FG V +G G +AVK + A F ++ +
Sbjct: 199 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQL------------- 243
Query: 129 SHPNIVRYLGTVREEES-LNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLE 185
H N+V+ LG + EE+ L I+ E++ GS+ L G + ++ + +E
Sbjct: 244 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 303
Query: 186 YLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVI 245
YL + +HRD+ N+LV K++DFG +K+ + S + K W APE +
Sbjct: 304 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-----STQDTGKLPVKWTAPEAL 358
Query: 246 RQTGHSYSADIWSVGCTVIEMAT-GKPPW 273
R+ S +D+WS G + E+ + G+ P+
Sbjct: 359 REKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 130 HPNIVRYLGTVREEES-LNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEY 186
H N+V+ LG + EE+ L I+ E++ GS+ L G + ++ + +EY
Sbjct: 58 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 117
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + +HRD+ N+LV K++DFG +K+ + S + K W APE +R
Sbjct: 118 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-----STQDTGKLPVKWTAPEALR 172
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPW 273
+ S +D+WS G + E+ + G+ P+
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 130 HPNIVRYLGTVREEES-LNILLEFVPGGSISSLLGKFG--PFPEAVMRTYTKQLLLGLEY 186
H N+V+ LG + EE+ L I+ E++ GS+ L G + ++ + +EY
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 187 LHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVIR 246
L + +HRD+ N+LV K++DFG +K+ + S + K W APE +R
Sbjct: 133 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-----STQDTGKLPVKWTAPEALR 187
Query: 247 QTGHSYSADIWSVGCTVIEMAT-GKPPW 273
+ S +D+WS G + E+ + G+ P+
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 36/249 (14%)
Query: 72 ELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSHP 131
+ +G G FG V+ N A+K++ + ++EK + HP
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-------EHP 63
Query: 132 NIVRYLGTVREEES------------LNILLEFVPGGSISSLLGKFGPFPE---AVMRTY 176
IVRY E+ + L I ++ ++ + E +V
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 177 TKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFG---ASKQVAELATV------ 227
Q+ +E+LH+ G+MHRD+K +NI +K+ DFG A Q E TV
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 228 -SGAKSMKGTPYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHI 286
+ GT +M+PE I +S+ DI+S+G + E+ P+S Q + V L +
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDV 240
Query: 287 GTTKSHPPI 295
K PP+
Sbjct: 241 RNLK-FPPL 248
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 28/227 (12%)
Query: 65 PIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQV-LIAANFASKEKAQDHIXXXXXXXX 123
P + LIG G++G VY+ + ++ + +A+K+V + + ++ I
Sbjct: 27 PDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKS 86
Query: 124 XXXXXSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLG 183
H I+ + + + L I+LE + + L E ++T LLLG
Sbjct: 87 DYIIRLHDLIIP--EDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLG 143
Query: 184 LEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQV---AELATVSGA---------- 230
+++H GI+HRD+K AN L++ +K+ DFG ++ + ++ V+
Sbjct: 144 EKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 231 ---KSMKG-------TPYWMAPEVI-RQTGHSYSADIWSVGCTVIEM 266
K++K T ++ APE+I Q ++ S DIWS GC E+
Sbjct: 204 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 47/239 (19%)
Query: 132 NIVRYLGTVREEESLN--ILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHN 189
NI++ + TV++ S ++ E++ L F +R Y +LL L+Y H+
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD---IRFYMYELLKALDYCHS 155
Query: 190 HGIMHRDIKGANILVDN-KGCIKLADFGASKQVAELATVSGAKSMK-GTPYWMAPE-VIR 246
GIMHRD+K N+++D+ + ++L D+G +AE + +++ + Y+ PE ++
Sbjct: 156 KGIMHRDVKPHNVMIDHQQKKLRLIDWG----LAEFYHPAQEYNVRVASRYFKGPELLVD 211
Query: 247 QTGHSYSADIWSVGCTVIEMATGKPPW---SQQYQEVAAL---------------FHIGT 288
+ YS D+WS+GC + M + P+ Y ++ + +HI
Sbjct: 212 YQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDL 271
Query: 289 TKSHPPI--------------PEN---LSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
I EN +S +A D L K L + R TA E ++HP+
Sbjct: 272 DPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 110/272 (40%), Gaps = 27/272 (9%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ +G GAFG+V G+ AV +V + S A + H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM-LKSTAHADEKEALMSELKIMSHLGQH 109
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFG----------PFPEAVMRTYTKQL 180
NIV LG + ++ E+ G + + L + P + ++ Q+
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWM 240
G+ +L + +HRD+ N+L+ N K+ DFG ++ + + + + WM
Sbjct: 170 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 229
Query: 241 APEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW------SQQYQEVAALFHIGTTKSHP 293
APE I ++ +D+WS G + E+ + G P+ S+ Y+ V G + P
Sbjct: 230 APESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD----GYQMAQP 285
Query: 294 PI-PENLSVKAKDFLLKCLEKEPDLRPTASEL 324
P+N+ + C EP RPT ++
Sbjct: 286 AFAPKNIY----SIMQACWALEPTHRPTFQQI 313
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 31/271 (11%)
Query: 74 IGCGAFGRVYMGMNL----DSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G G+FG VY G+ D E +A+K V AA+ ++ I
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------RERIEFLNEASVMKEFN 77
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----------AVMRTYTK 178
H ++VR LG V + + +++E + G + S L P E + M
Sbjct: 78 CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 136
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT-- 236
++ G+ YL+ + +HRD+ N +V +K+ DFG ++ + E T K KG
Sbjct: 137 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 194
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA--ALFHIGTTKSHPP 294
WM+PE ++ + +D+WS G + E+AT Q YQ ++ +
Sbjct: 195 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA---EQPYQGLSNEQVLRFVMEGGLLD 251
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+N + + C + P +RP+ E++
Sbjct: 252 KPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 110/272 (40%), Gaps = 27/272 (9%)
Query: 71 GELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXXSH 130
G+ +G GAFG+V G+ AV +V + S A + H
Sbjct: 43 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM-LKSTAHADEKEALMSELKIMSHLGQH 101
Query: 131 PNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFG----------PFPEAVMRTYTKQL 180
NIV LG + ++ E+ G + + L + P + ++ Q+
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 181 LLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWM 240
G+ +L + +HRD+ N+L+ N K+ DFG ++ + + + + WM
Sbjct: 162 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 221
Query: 241 APEVIRQTGHSYSADIWSVGCTVIEM-ATGKPPW------SQQYQEVAALFHIGTTKSHP 293
APE I ++ +D+WS G + E+ + G P+ S+ Y+ V G + P
Sbjct: 222 APESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD----GYQMAQP 277
Query: 294 PI-PENLSVKAKDFLLKCLEKEPDLRPTASEL 324
P+N+ + C EP RPT ++
Sbjct: 278 AFAPKNIY----SIMQACWALEPTHRPTFQQI 305
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 31/271 (11%)
Query: 74 IGCGAFGRVYMGMNL----DSGEL-LAVKQVLIAANFASKEKAQDHIXXXXXXXXXXXXX 128
+G G+FG VY G+ D E +A+K V AA+ ++ I
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------RERIEFLNEASVMKEFN 73
Query: 129 SHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPE----------AVMRTYTK 178
H ++VR LG V + + +++E + G + S L P E + M
Sbjct: 74 CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 132
Query: 179 QLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGT-- 236
++ G+ YL+ + +HRD+ N +V +K+ DFG ++ + E T K KG
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLP 190
Query: 237 PYWMAPEVIRQTGHSYSADIWSVGCTVIEMATGKPPWSQQYQEVA--ALFHIGTTKSHPP 294
WM+PE ++ + +D+WS G + E+AT Q YQ ++ +
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA---EQPYQGLSNEQVLRFVMEGGLLD 247
Query: 295 IPENLSVKAKDFLLKCLEKEPDLRPTASELL 325
P+N + + C + P +RP+ E++
Sbjct: 248 KPDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.130 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,524,915
Number of Sequences: 62578
Number of extensions: 798649
Number of successful extensions: 4796
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1328
Number of HSP's gapped (non-prelim): 1314
length of query: 669
length of database: 14,973,337
effective HSP length: 105
effective length of query: 564
effective length of database: 8,402,647
effective search space: 4739092908
effective search space used: 4739092908
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)