BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005938
(668 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255584969|ref|XP_002533196.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223526994|gb|EEF29188.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 669
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/678 (71%), Positives = 573/678 (84%), Gaps = 19/678 (2%)
Query: 1 MAALQRIVQS--SGGSGYGSSRA-------ADVAVPDQFPAGLRVLVVDDDITCLRILEQ 51
MAALQR+ S + S Y S + ADVAV DQFPAGLRVLVVDDD TCLRILEQ
Sbjct: 1 MAALQRVASSVSATASNYSSCKGNGVVTATADVAVSDQFPAGLRVLVVDDDTTCLRILEQ 60
Query: 52 MLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIM 111
MLRRCLY+VTTCSQA VAL++LRERKGCFDVVLSDVHMPDMDGFKLLEH+GLEMDLPVIM
Sbjct: 61 MLRRCLYHVTTCSQAKVALNLLRERKGCFDVVLSDVHMPDMDGFKLLEHVGLEMDLPVIM 120
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
MSADGR SAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK+W+ENKE E+SGSLE+ D
Sbjct: 121 MSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKKWHENKEIEHSGSLEDNDR 180
Query: 172 HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQ 231
HKRG+++ EY SSVNEGTEG K Q++R ++K+EDDGE +SDDPST+KKPRVVWSVELHQ
Sbjct: 181 HKRGNEDAEYTSSVNEGTEGVLKGQKRRSNSKDEDDGEPDSDDPSTSKKPRVVWSVELHQ 240
Query: 232 QFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGG 291
QFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH LQKFRLYLKRL+GV+QQGG
Sbjct: 241 QFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH-----LQKFRLYLKRLSGVAQQGG 295
Query: 292 ITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPA 351
I+++FC P+++NVKL SLGRFDIQALAASGQIPPQTLAALHAEL GRPTG+LVT +DQP
Sbjct: 296 ISSTFCGPMDSNVKLNSLGRFDIQALAASGQIPPQTLAALHAELFGRPTGSLVTTMDQPT 355
Query: 352 LLQATLQGPKCIPADHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAV 411
LLQA+ Q PKCIP +HGV FGQ +VKC S + ++ PQ+++SV++ S+G+G W SNSLG V
Sbjct: 356 LLQASRQSPKCIPVEHGVTFGQPIVKCSSGISKHFPQNMVSVEEVSSGYGAWPSNSLGTV 415
Query: 412 ASTSNLGGLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSS 471
++NLGG+ QNGNMLMDI HQQQ++ QQ QQQ +L++ SRSI+VQPSCLVVPS+SS
Sbjct: 416 GPSTNLGGMTTQNGNMLMDIFHQQQKQ---QQPQQQQSLADPSRSINVQPSCLVVPSQSS 472
Query: 472 ASFQAGNSPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAP 531
A FQAGNSPASVNQS +FNR V+DYSLLSSQSNNS+LN+G I +GD+KTT + GY AP
Sbjct: 473 ACFQAGNSPASVNQS-NFNRNVVIDYSLLSSQSNNSALNIGHIPEGDLKTTGAVNGYSAP 531
Query: 532 GSLSPSASSCSVTADNTSSQQVQNSNIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLG 591
GSLSP ASSCSV AD+ +QVQN +AF A RQ+P L N+ +IQGSYG +S ++ D G
Sbjct: 532 GSLSPPASSCSVNADSGVPRQVQNPTLAFGAVRQLPALSPNIFNIQGSYGVRSDDILDQG 591
Query: 592 S-LRNHGFMGKGNCIPSRLAVDEFESPMNNLNYGNIYLDNNANKVKEEPNLEFVENAKVG 650
+N GF+GKG CIPSR AVDEFE+P +NL++G +Y++NN NKVK+EPN++F + ++VG
Sbjct: 592 PFFKNLGFVGKGTCIPSRFAVDEFETPSSNLSHGKLYVENNDNKVKQEPNIDFTDTSRVG 651
Query: 651 IPMYQQYAPNDLMSVFTD 668
IP+ QQY PNDLMSVFT+
Sbjct: 652 IPVLQQYPPNDLMSVFTE 669
>gi|359472591|ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 643
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/650 (74%), Positives = 561/650 (86%), Gaps = 10/650 (1%)
Query: 1 MAALQRIVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNV 60
MAAL ++ S G GS +A DV V DQFPAGLRVLVVDDD+TCL+ILEQMLRRCLY+V
Sbjct: 1 MAALLKVPPQSSGGTNGSCKA-DVVVSDQFPAGLRVLVVDDDVTCLKILEQMLRRCLYHV 59
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSA 120
TTCSQA +AL+ILRE+KGCFD+VLSDVHMPDMDG+KLLEH+GLEMDLPVIMMSADGR SA
Sbjct: 60 TTCSQATIALNILREKKGCFDIVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSA 119
Query: 121 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIE 180
VMRGIRHGACDYLIKPIREEELKNIWQHVVRK+WNENKEHE+SGSLE+ D HKRG ++ E
Sbjct: 120 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAE 179
Query: 181 YASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 240
YASSVNEG EG K Q+KR +K+EDDGELE++DPST+KKPRVVWSVELHQQFVSAVNQL
Sbjct: 180 YASSVNEGAEGILKGQKKRRDSKDEDDGELENEDPSTSKKPRVVWSVELHQQFVSAVNQL 239
Query: 241 GIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAP 299
GIDKAVPKRILELMNVPGLTRENVASH LQKFRLYLKRL+GV+ QQGGI NSFC P
Sbjct: 240 GIDKAVPKRILELMNVPGLTRENVASH-----LQKFRLYLKRLSGVAQQQGGIPNSFCGP 294
Query: 300 IETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLV-TAVDQPALLQATLQ 358
+E NVKLGSLGRFDIQALAASGQIPPQTLAAL AELLGRPT NLV A+DQPALLQA+LQ
Sbjct: 295 VEPNVKLGSLGRFDIQALAASGQIPPQTLAALQAELLGRPTSNLVLPAMDQPALLQASLQ 354
Query: 359 GPKCIPADHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLG 418
GPKCIP +HGVAFGQ LVKCQ+N+ ++ P +++S +D +GFG W SNSLG V ++ +LG
Sbjct: 355 GPKCIPVEHGVAFGQPLVKCQTNISKHFPPTVVSTEDVPSGFGAWPSNSLGTVGTSGSLG 414
Query: 419 GLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGN 478
GL+ QN N+LMD+L QQ+Q QQ QQQ+ + E SRSI+VQPSCLVVPSR+SASFQAGN
Sbjct: 415 GLSAQNNNILMDML--HQQQQHQQQQQQQAVIPEPSRSINVQPSCLVVPSRTSASFQAGN 472
Query: 479 SPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSPSA 538
SPASVNQ+CSFNR AV+DYSLL+ QSNNSSL++GQISDGD+K T V+ G+ APGS+SPS
Sbjct: 473 SPASVNQNCSFNRNAVIDYSLLTPQSNNSSLSVGQISDGDLKNTTVLGGFSAPGSISPSV 532
Query: 539 SSCSVTADNTSSQQVQNSNIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNHGF 598
SSCSV A N++++ VQNS + F A RQ+PG+VSN+ DIQGSYGA+SGEV D G LRN GF
Sbjct: 533 SSCSVNAGNSTTRPVQNSTVTFGAPRQLPGVVSNICDIQGSYGARSGEVLDQGLLRNLGF 592
Query: 599 MGKGNCIPSRLAVDEFESPMNNLNYGNIYLDNNANKVKEEPNLEFVENAK 648
+GKG IPSR AVDE ESP++NLN G +Y +N N+VK+EPNL+++ENA+
Sbjct: 593 VGKGTSIPSRFAVDEPESPISNLNNGKVYGENEGNRVKQEPNLDYMENAR 642
>gi|224111430|ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
gi|222864892|gb|EEF02023.1| type-b response regulator [Populus trichocarpa]
Length = 663
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/674 (71%), Positives = 565/674 (83%), Gaps = 17/674 (2%)
Query: 1 MAALQRIVQSSGGSG--YGSSRAA--DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRC 56
MAALQR+ S S YGS + A D+ DQFPAGLRVLVVDDDITCLR+LE+ML RC
Sbjct: 1 MAALQRVASSLSTSASSYGSCKGAGADLMFSDQFPAGLRVLVVDDDITCLRLLEKMLCRC 60
Query: 57 LYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADG 116
LYNVTTCSQA AL +LRERKGCFDVVLSDVHMPDMDGFKLLE +GLEMDLPVIMMSADG
Sbjct: 61 LYNVTTCSQATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVIMMSADG 120
Query: 117 RVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGS 176
R SAVMRGIRHGACDYLIKPIREEELKNIWQHV+RK+WNENKE E+SGS E+ D +KRG+
Sbjct: 121 RTSAVMRGIRHGACDYLIKPIREEELKNIWQHVIRKKWNENKEQEHSGSFEDNDWYKRGN 180
Query: 177 DEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSA 236
D+ E ASSVNEG EG K Q+KR AKEEDD ELE DDPS +KKPRVVWSVELHQQFVSA
Sbjct: 181 DDTENASSVNEGAEGVLKGQKKRNIAKEEDDNELEIDDPSASKKPRVVWSVELHQQFVSA 240
Query: 237 VNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSF 296
VNQLGIDKAVPKRILELMNVPGLTRENVASH LQKFRLYLKRL+GV+QQGGI+N+F
Sbjct: 241 VNQLGIDKAVPKRILELMNVPGLTRENVASH-----LQKFRLYLKRLSGVAQQGGISNTF 295
Query: 297 CAPIETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQAT 356
C P+++NVK+ LGRFDIQALAAS QIPPQTLAALHAEL GRPTG+LVT VDQPALLQA+
Sbjct: 296 CGPLDSNVKVNPLGRFDIQALAASSQIPPQTLAALHAELFGRPTGSLVTTVDQPALLQAS 355
Query: 357 LQGPKCIPADHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSN 416
+QGPKCIP +HGVAFGQ LVKCQ+N+ ++ P+++ISV+D ++GFG W SNS+G V S+SN
Sbjct: 356 MQGPKCIPVEHGVAFGQPLVKCQTNISKHFPRNVISVEDVASGFGAWPSNSVGTVGSSSN 415
Query: 417 LGGLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 476
LGG+N QN NMLMDI QQ++Q QQ QQS+LSE SRSI+VQPSCLVVPS+S A+FQA
Sbjct: 416 LGGMNSQNSNMLMDI---LQQQKQQQQPLQQSSLSEPSRSINVQPSCLVVPSQSPATFQA 472
Query: 477 GNSPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSP 536
GNSPASV+Q+CS+NR ++DYSLLS+QSNNSSLN+GQI +GD+KTT V +GY S+SP
Sbjct: 473 GNSPASVDQNCSYNRSTMIDYSLLSAQSNNSSLNIGQILNGDLKTTGV-SGYSGSVSISP 531
Query: 537 SASSCSVTADNTSSQQVQNSNIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNH 596
S CSV DNT SQQ ++S +A RA RQ+PGLV N+ ++QGSY A+S EV D LRN
Sbjct: 532 -LSPCSVDPDNT-SQQGRSSTMAIRAVRQLPGLVPNISNLQGSYSARSSEVLDQRPLRNL 589
Query: 597 GFMGKGNCIPSRLAVDEFESPMNNLNYGNIYLDNNANKVKEEPNLEFVENAKVGIPMYQQ 656
GF+ K IPSRLAVDEFES M++L++ Y++ + NKVK+EPN+E+++NA+VGIP+ QQ
Sbjct: 590 GFVAKCTSIPSRLAVDEFESTMSSLDHEKSYMEISGNKVKQEPNIEYMDNARVGIPILQQ 649
Query: 657 Y--APNDLMSVFTD 668
AP+DLMSVFT+
Sbjct: 650 LPPAPSDLMSVFTE 663
>gi|298103720|emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
Length = 663
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/674 (70%), Positives = 555/674 (82%), Gaps = 17/674 (2%)
Query: 1 MAALQRIVQSSGGSGYGSSRA----ADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRC 56
MAALQR+ S SG AD+ DQFPAGLRVLVVDDDITCLR+LE+ML RC
Sbjct: 1 MAALQRVASSLSTSGSSYGSCKGAGADLMFSDQFPAGLRVLVVDDDITCLRLLEKMLCRC 60
Query: 57 LYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADG 116
LYNVTTCSQA AL +LRERKGCFDVVLSDVHMPDMDGFKLLE +GLEMDLPVIMMSADG
Sbjct: 61 LYNVTTCSQATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVIMMSADG 120
Query: 117 RVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGS 176
R SAVMRGI+HGACDYLIKPIREEELKNIWQHV+RK+WNENKE E+SGS E+ D +KRG+
Sbjct: 121 RTSAVMRGIKHGACDYLIKPIREEELKNIWQHVIRKKWNENKEQEHSGSFEDNDWYKRGN 180
Query: 177 DEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSA 236
D+ E ASSVNEG EG K Q+KR AKEEDD ELE DDPS +KKPRVVWSVELHQQFVSA
Sbjct: 181 DDTENASSVNEGAEGVLKGQKKRNIAKEEDDNELEIDDPSASKKPRVVWSVELHQQFVSA 240
Query: 237 VNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSF 296
VNQLGID+AVPKRILELMNVPGLTRENVASH LQKFRLYLKRL+GV+QQGGI+N+F
Sbjct: 241 VNQLGIDEAVPKRILELMNVPGLTRENVASH-----LQKFRLYLKRLSGVAQQGGISNTF 295
Query: 297 CAPIETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQAT 356
C P+++NVK+ LGRFDIQALAAS QIPPQTLAALHAEL GRPTG+LVT VDQPALLQA+
Sbjct: 296 CGPLDSNVKVNPLGRFDIQALAASSQIPPQTLAALHAELFGRPTGSLVTTVDQPALLQAS 355
Query: 357 LQGPKCIPADHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSN 416
+QGPKCIP +HGVAFGQ L KCQSN+ ++ P+++ISV+D ++GFG W SNS+G V S+SN
Sbjct: 356 MQGPKCIPVEHGVAFGQPLAKCQSNISKHFPRNVISVEDVASGFGAWPSNSVGTVGSSSN 415
Query: 417 LGGLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 476
LGG+N QN MLMDI QQ++Q QQ QQS+LSE S SI+VQPSCLVVPS+S A+FQA
Sbjct: 416 LGGMNSQNSTMLMDI---LQQQKQQQQPLQQSSLSEPSCSINVQPSCLVVPSQSPATFQA 472
Query: 477 GNSPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSP 536
GNSPASV+QSCS+NR ++DYSLLS+QSNNS LN+GQI +GD+KTT V + Y S+SP
Sbjct: 473 GNSPASVDQSCSYNRSTMIDYSLLSAQSNNSLLNIGQILNGDLKTTGV-SRYSGSVSISP 531
Query: 537 SASSCSVTADNTSSQQVQNSNIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNH 596
S CSV DNT SQQ ++S +A RA RQ+PGLV N+ + QGSY A+S EV D LRN
Sbjct: 532 -LSPCSVDPDNT-SQQGRSSTMAIRAVRQLPGLVPNISNFQGSYSARSSEVLDQRPLRNL 589
Query: 597 GFMGKGNCIPSRLAVDEFESPMNNLNYGNIYLDNNANKVKEEPNLEFVENAKVGIPMYQQ 656
GF+ IPSRLAVDEFES M++L++ Y++ + NKVK+EPN+EF++NA+VGIPM QQ
Sbjct: 590 GFVANCTSIPSRLAVDEFESTMSSLDHEKSYMEISGNKVKQEPNIEFMDNARVGIPMLQQ 649
Query: 657 Y--APNDLMSVFTD 668
AP+DLMSVFT+
Sbjct: 650 LPPAPSDLMSVFTE 663
>gi|298103718|emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis]
Length = 671
Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/683 (68%), Positives = 544/683 (79%), Gaps = 27/683 (3%)
Query: 1 MAALQRIVQSSGGSG--YGSSRAA--DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRC 56
MAALQR+ S G S YGS + A DV V DQFPAGLRVLVVDDDITCLR+LE+M RRC
Sbjct: 1 MAALQRVAPSLGTSASTYGSCKGAGADVIVSDQFPAGLRVLVVDDDITCLRLLEKMPRRC 60
Query: 57 LYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADG 116
LY+VTTCSQA AL +LRERKGCFDVVLSDVHMPDMDGFKLLE +GLEMDLPVIMMSADG
Sbjct: 61 LYHVTTCSQATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVIMMSADG 120
Query: 117 RVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGS 176
R SAVMRGI HGACDYLIKPIREEELKNIWQHV+RK+WNENKE E+SGS E+ D HKRG+
Sbjct: 121 RTSAVMRGISHGACDYLIKPIREEELKNIWQHVIRKKWNENKEQEHSGSFEDNDRHKRGN 180
Query: 177 DEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSA 236
D E ASSV+EG EG K Q+KR AK+EDD ELE+DDPS ++KPRVVWSVELHQQFVSA
Sbjct: 181 DA-ENASSVSEGAEGVLKGQKKRSIAKDEDDAELENDDPSASRKPRVVWSVELHQQFVSA 239
Query: 237 VNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSF 296
VN LGIDKAVPKRILELMNVPGLTRENVASH LQKFRLYLKRL+GV+QQGGI+N F
Sbjct: 240 VNHLGIDKAVPKRILELMNVPGLTRENVASH-----LQKFRLYLKRLSGVAQQGGISNPF 294
Query: 297 CAPIETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQAT 356
C +++NVKL LGRFDIQ LAASGQIPPQTLAA HAEL G P G +VT VDQPALLQA+
Sbjct: 295 CGLLDSNVKLNPLGRFDIQVLAASGQIPPQTLAAPHAELFGHPAGGMVTTVDQPALLQAS 354
Query: 357 LQGPKCIPADHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSN 416
+QGPKCIPA+HG+AFGQ L KCQ+N+ ++ PQ+++S ++ +TGF W SNS+G V SN
Sbjct: 355 VQGPKCIPAEHGMAFGQPLGKCQTNMSKHFPQNVVSAEEVATGFVAWPSNSVGTVGPISN 414
Query: 417 LGGLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 476
LGG++ +N NMLMD++ QQ++Q QQS +L E SR I+VQPSCLVVPS+SSA+FQA
Sbjct: 415 LGGMSSKNSNMLMDVV---QQQKQQQQSPHLPSLPEPSRIINVQPSCLVVPSQSSATFQA 471
Query: 477 GNSPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSP 536
GNSPASVNQ+CS++R ++DYSLLS QSNNSSLN+GQIS GD+KTT V +
Sbjct: 472 GNSPASVNQNCSYSRSPMIDYSLLSPQSNNSSLNIGQISHGDLKTTGVSGYSGS--GSIS 529
Query: 537 SASSCSVTADNTSSQQVQNSNIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNH 596
SSCSV DNT SQQ Q+S + RAARQ+PGL N+ + QGSYGAKS EV D G LRN
Sbjct: 530 PLSSCSVNPDNT-SQQGQSSTMTIRAARQLPGLGPNISNFQGSYGAKSSEVLDQGPLRNL 588
Query: 597 GFMGKGNCIPSRLAVDEFESPMNNLNYGNIYLDNNANK---------VKEEPNLEFVENA 647
GF+GK IPSRLAVDEFES M+NL + +Y++ N NK VK+EPN+EF++NA
Sbjct: 589 GFVGKCTSIPSRLAVDEFESTMSNLEHEKLYMETNGNKVKQEPNGNAVKQEPNVEFMDNA 648
Query: 648 KVGIPMYQQYAPN--DLMSVFTD 668
KV IP+ Q PN DLMSVF +
Sbjct: 649 KVLIPILPQLPPNTSDLMSVFKE 671
>gi|343407540|gb|AEM23771.1| RRB1 type-b response regulator [Nicotiana tabacum]
Length = 654
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/648 (60%), Positives = 489/648 (75%), Gaps = 17/648 (2%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FP GLRVLVVDDDI CLRILEQMLR+C Y+VTTC+QA VAL++LRER+G FDVVLSDV
Sbjct: 17 DTFPVGLRVLVVDDDIVCLRILEQMLRKCKYSVTTCTQATVALNLLRERRGSFDVVLSDV 76
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLP+IMMS DGR + VMRG++HGACDYLIKPIR+EELKNIWQ
Sbjct: 77 HMPDMDGFKLLELVGLEMDLPIIMMSGDGRTNLVMRGVQHGACDYLIKPIRDEELKNIWQ 136
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HVVRK+ + +KE E SGSL++ D HKRG+D+ E ASSV EG + K Q+K+ AKEED+
Sbjct: 137 HVVRKKCSFSKEPEYSGSLDDNDRHKRGNDDAECASSVIEGADRVLKPQKKKRDAKEEDE 196
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
E+E+DDP+T KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH
Sbjct: 197 TEMENDDPTTAKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 256
Query: 268 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQ 326
LQKFRLYLKRL+GV+ QQGG +++C PIE N KLGSLGRFDIQALAASGQIPP+
Sbjct: 257 -----LQKFRLYLKRLSGVAQQQGGFPSTYCGPIEQNPKLGSLGRFDIQALAASGQIPPE 311
Query: 327 TLAALHAELLGRPTGNLV-TAVDQPALLQATLQGPKCIPADHGVAFGQQLVKCQSNV--P 383
TL ALHAELLGR +GNLV +V+QP LLQA+LQ KCIP DH VA+GQ L+KC ++ P
Sbjct: 312 TLTALHAELLGRSSGNLVLPSVEQPDLLQASLQQAKCIPVDHVVAYGQPLMKCPPSITNP 371
Query: 384 ENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGLNPQNGNMLMDIL---HQQQQKQQ 440
+ L Q +S +D +GFG W + ++ V S SNL GL + NMLM ++ Q Q++QQ
Sbjct: 372 KLLSQPTMSAEDVHSGFGSWRAKNICMVPS-SNLTGLAAPDSNMLMAMMQHQQQWQKQQQ 430
Query: 441 NQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGNSPASVNQSCSFNRGAVVDYSLL 500
+Q Q+QS LSE + SI+V+PSCLV+PS+S +FQ G+SP S++Q+CS ++ +++DY +L
Sbjct: 431 LEQQQKQSGLSEANHSINVKPSCLVLPSQSPGNFQVGDSPGSISQACSLSKSSIIDYRVL 490
Query: 501 SSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSPSASSCSVTADNTSSQQVQNSNIAF 560
S QSNNSS + Q+ D ++K + S +P S+CSV ADN+ Q+ NS+ A
Sbjct: 491 SPQSNNSSAVV-QVLDRELKPACGLNRLSTAASFTPLVSACSVHADNSVGLQLHNSSSAS 549
Query: 561 RAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNHGFMGKGNCIPSRLAVDEFESPMNN 620
A++Q+PG V N S +K ++ D G RN G +GK IPSR AVDE +SPM N
Sbjct: 550 GASKQLPGFVPNHLGFPVSCYSKPSQILDQGPTRNPG-VGKAASIPSRFAVDESDSPMCN 608
Query: 621 LNYGNIYLDNNANKVKEEPNLEFVENAKVGIPMYQQYAPNDLMSVFTD 668
+ +Y ++ KVK+EPN+ +ENAKVG ++Q + DLMS F+D
Sbjct: 609 FSTAKVYTED--TKVKQEPNMNIMENAKVGPALFQNFPSGDLMSAFSD 654
>gi|356502390|ref|XP_003520002.1| PREDICTED: uncharacterized protein LOC100817125 [Glycine max]
Length = 633
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/652 (59%), Positives = 479/652 (73%), Gaps = 25/652 (3%)
Query: 22 ADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFD 81
A A +FP GLRVLVVDDD T L+I+EQM RC Y VTTC++A VAL++LRERKGCFD
Sbjct: 2 APCAAAAEFPVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFD 61
Query: 82 VVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEE 141
VVLSDVHMPDMDG+KLLEH+GLEMDLPVIMMS D SAVM+GIRHGACDYLIKP+REEE
Sbjct: 62 VVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEE 121
Query: 142 LKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRIS 201
L+NIWQHVVRK WN+NKE +NSGS+E++D +K G+D+ EY SSV + E KA +KR S
Sbjct: 122 LRNIWQHVVRKFWNDNKELDNSGSMEDSDRNKWGNDDAEYTSSVADAAE-VVKAPKKRSS 180
Query: 202 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 261
KEED ELESDDP+T+KKPRVVWSVELHQQFVSAVNQLG+DKAVPKRILELMNVPGLTR
Sbjct: 181 LKEEDI-ELESDDPATSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTR 239
Query: 262 ENVASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAAS 320
ENVASH LQKFRLYLKRL+GV+ QQ G+ N+ IE+ KLG+ GRFDIQALAA+
Sbjct: 240 ENVASH-----LQKFRLYLKRLSGVAQQQNGMLNAIPGTIES--KLGATGRFDIQALAAA 292
Query: 321 GQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQATLQGPKCIPADHGVAFGQQLVKCQS 380
G +PP+TLAALHAELLG P ++++ VDQ LLQA++QG K A+H VA+GQ LVKC S
Sbjct: 293 GHVPPETLAALHAELLGHPATHMMSTVDQTTLLQASIQGLKHSHAEHAVAYGQPLVKCHS 352
Query: 381 NVPENLPQSIISVDDASTGFGVWAS--NSLGAVASTSNLGGLNPQNGNMLMDILH--QQQ 436
N+ +N SI++V+D S+G+G W S N++G V S++ + QN NMLMDIL Q Q
Sbjct: 353 NIGKNFSPSILTVNDTSSGYGTWPSSNNTIGLVRPNSSVERVGIQNNNMLMDILEHQQSQ 412
Query: 437 QKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGNSPASVNQSCSFNRGAVVD 496
Q QQ QQ QQQS + + S SI+VQPSC+VVPS+SS +FQA NSPASVNQ SF R A++D
Sbjct: 413 QHQQKQQLQQQSLIHDQSCSINVQPSCMVVPSQSSDTFQAVNSPASVNQDFSFARNAIID 472
Query: 497 YSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSPSASSCSVTADNTSSQQVQNS 556
YSLLS +S N S + Q GD K V+ GY S+CS ++ N + QQ+QNS
Sbjct: 473 YSLLSQKSKN-SFSASQFPGGDTKARGVLYGYST-------PSTCSTSSSNGNRQQLQNS 524
Query: 557 NIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNHGFMGKGNCIPSRLAVDEFES 616
+ F AAR +P L+ + D + YG KSG++ D RN GF+GKG CIPSR +E ES
Sbjct: 525 TLTFGAARPLPSLLP-MSDRKDPYGFKSGDLLDQVCFRNLGFVGKGTCIPSRFVENEIES 583
Query: 617 PMNNLNYGNIYLDNNANKVKEEPNLEFVENAKVGIPMYQQYAPNDLMSVFTD 668
+++ + + +D++ N +EPN F+ KV P+ ++Y D VFT+
Sbjct: 584 SVSDFSQMKVNVDSSGNTRNQEPN--FINIPKVSHPIIERYPSRDHSRVFTE 633
>gi|297737623|emb|CBI26824.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/433 (77%), Positives = 381/433 (87%), Gaps = 8/433 (1%)
Query: 1 MAALQRIVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNV 60
MAAL ++ S G GS +A DV V DQFPAGLRVLVVDDD+TCL+ILEQMLRRCLY+V
Sbjct: 1 MAALLKVPPQSSGGTNGSCKA-DVVVSDQFPAGLRVLVVDDDVTCLKILEQMLRRCLYHV 59
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSA 120
TTCSQA +AL+ILRE+KGCFD+VLSDVHMPDMDG+KLLEH+GLEMDLPVIMMSADGR SA
Sbjct: 60 TTCSQATIALNILREKKGCFDIVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSA 119
Query: 121 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIE 180
VMRGIRHGACDYLIKPIREEELKNIWQHVVRK+WNENKEHE+SGSLE+ D HKRG ++ E
Sbjct: 120 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAE 179
Query: 181 YASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 240
YASSVNEG EG K Q+KR +K+EDDGELE++DPST+KKPRVVWSVELHQQFVSAVNQL
Sbjct: 180 YASSVNEGAEGILKGQKKRRDSKDEDDGELENEDPSTSKKPRVVWSVELHQQFVSAVNQL 239
Query: 241 GIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAP 299
GIDKAVPKRILELMNVPGLTRENVASH LQKFRLYLKRL+GV+ QQGGI NSFC P
Sbjct: 240 GIDKAVPKRILELMNVPGLTRENVASH-----LQKFRLYLKRLSGVAQQQGGIPNSFCGP 294
Query: 300 IETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLV-TAVDQPALLQATLQ 358
+E NVKLGSLGRFDIQALAASGQIPPQTLAAL AELLGRPT NLV A+DQPALLQA+LQ
Sbjct: 295 VEPNVKLGSLGRFDIQALAASGQIPPQTLAALQAELLGRPTSNLVLPAMDQPALLQASLQ 354
Query: 359 GPKCIPADHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLG 418
GPKCIP +HGVAFGQ LVKCQ+N+ ++ P +++S +D +GFG W SNSLG V ++ +LG
Sbjct: 355 GPKCIPVEHGVAFGQPLVKCQTNISKHFPPTVVSTEDVPSGFGAWPSNSLGTVGTSGSLG 414
Query: 419 GLNPQNGNMLMDI 431
GL+ QN N+LMD+
Sbjct: 415 GLSAQNNNILMDM 427
>gi|356519365|ref|XP_003528343.1| PREDICTED: uncharacterized protein LOC100804937 [Glycine max]
Length = 633
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/652 (57%), Positives = 472/652 (72%), Gaps = 37/652 (5%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP GLRVLVVDDD T L+I+EQM RC Y VTTC++A VAL++LRERKGCFDVVLSDVH
Sbjct: 7 EFPVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVH 66
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MPDMDG+KLLEH+GLEMDLPVIMMS D SAVM+GIRHGACDYLIKP+REEEL+NIWQH
Sbjct: 67 MPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQH 126
Query: 149 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 208
VVRK WN++KE +NSGS+E++D +KRG+D+ EY S + KA +KR S KEED
Sbjct: 127 VVRKFWNDSKEQDNSGSMEDSDQNKRGNDDAEYTSVAD---AAVVKAPKKRSSLKEEDI- 182
Query: 209 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 268
ELESDDP+ +KKPRVVWSVELHQQFVSAVNQLG+DKAVPKRILELMNVPGLTRENVASH
Sbjct: 183 ELESDDPAASKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASH- 241
Query: 269 QEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQT 327
LQKFRLYLKRL GV+ QQ G+ N+ PIE+N LG+ GRFD+QALAA+G +PP+T
Sbjct: 242 ----LQKFRLYLKRLTGVAQQQNGMLNTVPGPIESN--LGTNGRFDVQALAAAGHVPPET 295
Query: 328 LAALHAELLGRPTGNLVTAVDQPALLQATLQGPKCIPADHGVAFGQQLVKCQSNVPENLP 387
LAA+HAELLG PT N+++ VDQ LLQA++QG K A H VA+GQ LVKC SN+ +N
Sbjct: 296 LAAIHAELLGHPTNNIMSTVDQTTLLQASIQGLKHSHAGHAVAYGQPLVKCPSNIGKNFS 355
Query: 388 QSIISVDDASTGFGVWAS--NSLGAVASTSNLGGLNPQNGNMLM---------DILHQQQ 436
SI++V+D S+G+G W S N++G V +++ + QN NML+ QQQ
Sbjct: 356 PSILTVNDTSSGYGAWLSSNNTIGLVRPNNSVERVGIQNNNMLILEHQQRQQPQQKQQQQ 415
Query: 437 QKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGNSPASVNQSCSFNRGAVVD 496
Q++Q QQ QQQS + + S SI+VQPSCLVVPS+SS +FQA NSPASVNQ CSF A++D
Sbjct: 416 QQKQQQQLQQQSLIHDRSCSINVQPSCLVVPSQSSETFQAINSPASVNQDCSFAWNAIID 475
Query: 497 YSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSPSASSCSVTADNTSSQQVQNS 556
YSLL +SNN S + Q GD K V+ GY SSCS ++ N + QQ+QNS
Sbjct: 476 YSLLPQKSNN-SFSASQFPGGDTKARGVLYGYTT-------PSSCSTSSSNGNIQQLQNS 527
Query: 557 NIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNHGFMGKGNCIPSRLAVDEFES 616
+ F AAR +P L+ + D + YG KSG++ D RN GF+GK +CIPSR +E ES
Sbjct: 528 TLTFGAARPLPSLLP-MTDRKDPYGFKSGDLLDQVCFRNLGFVGKDSCIPSRFVENEIES 586
Query: 617 PMNNLNYGNIYLDNNANKVKEEPNLEFVENAKVGIPMYQQYAPNDLMSVFTD 668
+++ + +D + N+ KEEPN+ KV P+ ++Y D SVF +
Sbjct: 587 SVSDFTQMKVNVDISGNRQKEEPNI-----PKVSHPIIERYPSRDHSSVFAE 633
>gi|224099559|ref|XP_002311532.1| type-b response regulator [Populus trichocarpa]
gi|222851352|gb|EEE88899.1| type-b response regulator [Populus trichocarpa]
Length = 303
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 254/309 (82%), Positives = 275/309 (88%), Gaps = 6/309 (1%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
V DQFPAGLRVLVVDDDITCLR+LE+MLRRCLY+VTTCSQA AL +LRERKGCFDVVLS
Sbjct: 1 VSDQFPAGLRVLVVDDDITCLRLLEKMLRRCLYHVTTCSQATAALKLLRERKGCFDVVLS 60
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
DVHMPDMDGFKLLE +GLEMDLPVIMMSADGR SAVMRGI HGACDYLIKPIREEELKNI
Sbjct: 61 DVHMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNI 120
Query: 146 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 205
WQHV+RK+WNENKE E+SGS E+ D HKRG+D E ASSV+EG EG K Q+KR AK+E
Sbjct: 121 WQHVIRKKWNENKEQEHSGSFEDNDRHKRGNDA-ENASSVSEGAEGVLKGQKKRSIAKDE 179
Query: 206 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
DD ELE+DDPS +KKPRVVWSVELHQQFVSAVN LGIDKAVPKRILELMNVPGLTRENVA
Sbjct: 180 DDAELENDDPSASKKPRVVWSVELHQQFVSAVNHLGIDKAVPKRILELMNVPGLTRENVA 239
Query: 266 SHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPP 325
SH LQKFRLYLKRL+GV+QQGGI+N FC +++NVKL LGRFDIQ LAASGQIPP
Sbjct: 240 SH-----LQKFRLYLKRLSGVAQQGGISNPFCGLLDSNVKLNPLGRFDIQVLAASGQIPP 294
Query: 326 QTLAALHAE 334
QTLAALHAE
Sbjct: 295 QTLAALHAE 303
>gi|162460694|ref|NP_001104864.1| response regulator 10 [Zea mays]
gi|15667625|dbj|BAB68269.1| response regulator 10 [Zea mays]
Length = 686
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 312/679 (45%), Positives = 402/679 (59%), Gaps = 90/679 (13%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AA A +FP G++VLVVDDD TCL +L++ML C Y+VTTC QA AL +LRE + F
Sbjct: 2 AAAEARGGEFPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGF 61
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREE 140
DV++SDVHMPDMDGF+LLE +GLEMDLPVIMMSAD R VM G++HGACDYLIKP+R E
Sbjct: 62 DVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMNGVKHGACDYLIKPVRME 121
Query: 141 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 200
ELKNIWQHV+RK++NENK+HE+SGSL++TD ++ +++ EYASS N+G +G++K+QRK+
Sbjct: 122 ELKNIWQHVIRKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQRKK- 180
Query: 201 SAKEEDDGELESDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 259
KE+D+ +LE+ DPS+T KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGL
Sbjct: 181 REKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGL 240
Query: 260 TRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAA 319
TRENVASHLQ KFRLYLKR+ GI + F AP+ ++ + LG + QALAA
Sbjct: 241 TRENVASHLQ-----KFRLYLKRI--AQHHAGIPHPFVAPV-SSANVAPLGGLEFQALAA 292
Query: 320 SGQIPPQTLAALHAELLGRPTGNL-VTAVDQPALLQATLQGPKCIPADHGVAFGQQLVKC 378
SGQIPPQ LAAL ELLGRPT +L + DQ +L A +G K + +AFGQ + KC
Sbjct: 293 SGQIPPQALAALQDELLGRPTSSLALPGRDQSSLRVAATKGNKHH-EEREIAFGQPIYKC 351
Query: 379 QSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNMLMD------- 430
Q+N PQS +V F W +N +G STS LG + N QN NML+
Sbjct: 352 QNNAYGAFPQSSPAVGGLQP-FAAWPNNKVGMPDSTSTLGNVGNSQNSNMLLHELQQQPD 410
Query: 431 -----ILHQQQQKQQN--QQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGNSPASV 483
LH K SQ +T S IS + L++PS+ SF + P+
Sbjct: 411 TLLLGTLHNIDAKPSGVVMSSQSLNTF-PASEGISPNQNPLIIPSQP-PSFVSSIPPSMK 468
Query: 484 NQS--------CSFNRG------AVVDYSLLSSQSNN------------SSLNMGQISDG 517
++S S G A +L+SS N S + G
Sbjct: 469 HESLLGLPSTSTSLLGGLDMVNQASTSQALISSHGTNLPGLMNRSSNAIPSPGISNFQSG 528
Query: 518 DIKTT----AVITGYLAPGSLSPSAS---SCSVTADNTSSQQVQNSNIAFRAARQVPGLV 570
+I A+ PG L ++ SCS S+ V + + ++ GL+
Sbjct: 529 NIHYVVNQNAMGVSSRPPGVLKTESTDSLSCSYGYIGGSTS-VDSGLFSSQSKNPQYGLL 587
Query: 571 SNVGDIQGSY------------------GAKS--------GEVFDLGSLRNHGFMGKGNC 604
N D+ GS+ G S G++ D G RNHGF+GKG C
Sbjct: 588 QNQNDVNGSWSPSQDFDSFGNSLGQGHPGTTSSNFQSSALGKLPDQGRGRNHGFVGKGTC 647
Query: 605 IPSRLAVDEFESPMNNLNY 623
IPSR AVDE ESP NNL++
Sbjct: 648 IPSRFAVDEVESPTNNLSH 666
>gi|223942343|gb|ACN25255.1| unknown [Zea mays]
gi|323388571|gb|ADX60090.1| ARR-B family member [Zea mays]
gi|323388695|gb|ADX60152.1| ARR-B transcription factor [Zea mays]
gi|413956503|gb|AFW89152.1| putative two-component response regulator family protein isoform 1
[Zea mays]
gi|413956504|gb|AFW89153.1| putative two-component response regulator family protein isoform 2
[Zea mays]
Length = 686
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 313/681 (45%), Positives = 406/681 (59%), Gaps = 94/681 (13%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AA A +FP G++VLVVDDD TCL +L++ML C Y+VTTC QA AL +LRE + F
Sbjct: 2 AAAKARGGEFPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGF 61
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREE 140
DV++SDVHMPDMDGF+LLE +GLEMDLPVIMMSAD R VM GI+HGACDYLIKP+R E
Sbjct: 62 DVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMNGIKHGACDYLIKPVRME 121
Query: 141 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 200
ELKNIWQHV+RK++NENK+HE+SGSL++TD ++ +++ EYASS N+G +G++K+QRK+
Sbjct: 122 ELKNIWQHVIRKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQRKK- 180
Query: 201 SAKEEDDGELESDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 259
KE+D+ +LE+ DPS+T KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGL
Sbjct: 181 REKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGL 240
Query: 260 TRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAA 319
TRENVASHLQ KFRLYLKR+ GI + F AP+ ++ + LG + QALAA
Sbjct: 241 TRENVASHLQ-----KFRLYLKRI--AQHHAGIPHPFVAPV-SSANVAPLGGLEFQALAA 292
Query: 320 SGQIPPQTLAALHAELLGRPTGNL-VTAVDQPALLQATLQGPKCIPADHGVAFGQQLVKC 378
SGQIPPQ LAAL ELLGRPT +L + DQ +L A ++G K + +AFGQ + KC
Sbjct: 293 SGQIPPQALAALQDELLGRPTSSLALPGRDQSSLRVAAIKGNKHH-EEREIAFGQPIYKC 351
Query: 379 QSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNM---------- 427
Q+N PQ+ +V F W +N +G STS LG + N QN NM
Sbjct: 352 QNNAYGAFPQNSPAVGGLQP-FAAWPNNKVGMTDSTSTLGNVGNSQNSNMLLHELQQQPD 410
Query: 428 --LMDILHQQQQKQQN--QQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGNSPASV 483
L+ LH K SQ +T S IS + L++PS+ SF + P+
Sbjct: 411 TLLLGTLHNIDAKPSGVVMPSQSLNTF-PASEGISPNQNPLIIPSQP-PSFVSSIPPSMK 468
Query: 484 NQS--------CSFNRG------AVVDYSLLSSQSNN-----------------SSLNMG 512
++S S G A +L+SS N S+ G
Sbjct: 469 HESLLGLPSTSTSLLGGLDMVNQASTSQALISSHGTNLPGLMNRSSNAIPSPGISNFQSG 528
Query: 513 QI--------------SDGDIKTTAVIT-----GYLAPGSLSPSASSCSVTADNTSSQQV 553
I G +KT + + GY+ GS S + S + N +
Sbjct: 529 NIHYVVNQNAMGVSSKPPGVLKTESTDSLSCSYGYIG-GSTSVDSGLFSSQSKNPQYDLL 587
Query: 554 QNSNI---AFRAARQVPGLVSNVGDIQGSYGAKS--------GEVFDLGSLRNHGFMGKG 602
QN N ++ ++ +++G QG G S G++ D G RNHGF+GKG
Sbjct: 588 QNQNDVNGSWSPSQDFDSFGNSLG--QGHPGTTSSNFQSSALGKLPDQGRGRNHGFVGKG 645
Query: 603 NCIPSRLAVDEFESPMNNLNY 623
CIPSR AVDE ESP NNL++
Sbjct: 646 TCIPSRFAVDEVESPTNNLSH 666
>gi|162460014|ref|NP_001104861.1| response regulator 8 [Zea mays]
gi|13661174|dbj|BAB41137.1| response regulator 8 [Zea mays]
gi|195656391|gb|ACG47663.1| two-component response regulator ARR1 [Zea mays]
Length = 684
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 318/680 (46%), Positives = 404/680 (59%), Gaps = 103/680 (15%)
Query: 19 SRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
+R AD FP G++VLVVDDD TCL +L++ML C Y+VTTC QA AL +LRE +
Sbjct: 6 ARGAD------FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRR 59
Query: 79 CFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIR 138
FDV++SDVHMPDMDGF+LLE +GLEMDLPVIMMSAD R VM+GI+HGACDYLIKP+R
Sbjct: 60 GFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVR 119
Query: 139 EEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRK 198
EELKNIWQHVVRK++N NK+HE+SGSL++TD ++ +++ EYASS N+G +G++K+Q+K
Sbjct: 120 MEELKNIWQHVVRKKFNGNKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQKK 179
Query: 199 RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 258
+ KE+D+ +LES DPST+KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPG
Sbjct: 180 K-REKEDDETDLESGDPSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPG 238
Query: 259 LTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALA 318
LTRENVASHLQ KFRLYLKR+ GI + F A ++ K+ LG + QALA
Sbjct: 239 LTRENVASHLQ-----KFRLYLKRI--AQHHAGIPHPFVAS-ASSAKVAPLGGLEFQALA 290
Query: 319 ASGQIPPQTLAALHAELLGRPTGNL-VTAVDQPALLQATLQGPKCIPADHG---VAFGQQ 374
ASGQIPPQ LAAL ELLGRPT +L + DQ +L A ++G K HG +AFGQ
Sbjct: 291 ASGQIPPQALAALQDELLGRPTSSLALPGRDQSSLRLAAIKGNK----PHGEREIAFGQP 346
Query: 375 LVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNM------ 427
+ KCQ+N QS +V + F W +N LG S++ LG + N QN NM
Sbjct: 347 IYKCQNNTYGAFSQSSPAVGGLPS-FAAWPNNKLGMTDSSNTLGNVGNSQNSNMLLHELQ 405
Query: 428 ------LMDILHQQQQKQQNQQSQQQS-TLSETSRSISVQPSCLVVPSRSSASFQAGNSP 480
L LH K QS + S IS + LV+PS+S SF A P
Sbjct: 406 QQPDTLLSGTLHNIDVKPSGVVMPSQSLNVFPASEGISHNQNPLVIPSQS-PSFLASVPP 464
Query: 481 A--------SVNQSCSFNRG------AVVDYSLLSSQSNN-----------------SSL 509
+ S + S S G A L+SS N S+
Sbjct: 465 SMKHESLLGSPSPSTSLLGGLDMVNQASTSQPLISSHGANLPGLMNRSSNAMPSPGISNF 524
Query: 510 NMGQIS--------------DGDIKT--TAVIT---GYLAPGSLSPSASSCSVTADNTSS 550
G I G +KT T +T GY+ GS S +S S A N
Sbjct: 525 QSGNIPYVVNQNAMGVSSRPPGVLKTECTESLTHSYGYIG-GSTSVDSSLLSSQAKNPQY 583
Query: 551 QQVQNSN---IAFRAARQVPGLVSNVGDIQGSYGAKS--------GEVFDLGSLRNHGFM 599
+Q+ N ++ +++ +++G QG G+ S G++ D G RNHGF+
Sbjct: 584 GLLQSQNDVSSSWLSSQDFDSFGNSLG--QGHPGSTSSNFQSSALGKLPDQGRGRNHGFV 641
Query: 600 GKGNCIPSRLAVDEFESPMN 619
GKG CIPSR AVDE ESP N
Sbjct: 642 GKGTCIPSRFAVDEVESPTN 661
>gi|115451653|ref|NP_001049427.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|24308616|gb|AAN52739.1| Putative response regulator 10 [Oryza sativa Japonica Group]
gi|108706930|gb|ABF94725.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706931|gb|ABF94726.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706932|gb|ABF94727.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|110331747|dbj|BAE97711.1| B-type response regulator [Oryza sativa Japonica Group]
gi|113547898|dbj|BAF11341.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|118790738|tpd|FAA00254.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|125585452|gb|EAZ26116.1| hypothetical protein OsJ_09978 [Oryza sativa Japonica Group]
gi|215767224|dbj|BAG99452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767240|dbj|BAG99468.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 691
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/454 (59%), Positives = 329/454 (72%), Gaps = 30/454 (6%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP G++VLVVDDD TCL +L++ML C Y+ TTCSQA AL +LRE + FDV++SDVH
Sbjct: 11 EFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MPDMDGF+LLE +GLEMDLPVIMMSAD R VM+GI+HGACDYLIKP+R EELKNIWQH
Sbjct: 71 MPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQH 130
Query: 149 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 208
V+RK++NENKEHE+SGSL++TD + +++ EYASS N+G EG++K+Q+K+ ++ DG
Sbjct: 131 VIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKSQKKKRDKDDD-DG 189
Query: 209 ELESDDP-STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
ELES DP ST+KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGLTRENVASH
Sbjct: 190 ELESGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASH 249
Query: 268 LQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQT 327
LQKFRLYLKR+ GI N FC P + K+GSLG D QALAASGQIPPQ
Sbjct: 250 -----LQKFRLYLKRI--AQHHAGIANPFCPPASSG-KVGSLGGLDFQALAASGQIPPQA 301
Query: 328 LAALHAELLGRPTGNLV-TAVDQPALLQATLQGPKCIPADHG---VAFGQQLVKCQSNVP 383
LAAL ELLGRPT +LV DQ +L A ++G K HG +AFGQ + KCQ+N
Sbjct: 302 LAALQDELLGRPTNSLVLPGRDQSSLRLAAVKGNK----PHGEREIAFGQPIYKCQNNAY 357
Query: 384 ENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNMLMDILHQQQQKQQNQ 442
PQS +V + F W +N LG ST LGG+ N QN N+ +LH+ QQ
Sbjct: 358 GAFPQSSPAVGGMPS-FSAWPNNKLGMADSTGTLGGMSNSQNSNI---VLHELQQ----- 408
Query: 443 QSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 476
Q + LS T S+ V+PS +V+PS+S +F A
Sbjct: 409 --QPDAMLSGTLHSLDVKPSGIVMPSQSLNTFSA 440
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 585 GEVFDLGSLRNHGFMGKGNCIPSRLAVDEFESPMNNLNY 623
G++ D G +NHGF+GKG CIPSR AVDE ESP NNL++
Sbjct: 633 GKLPDQGRGKNHGFVGKGTCIPSRFAVDEIESPTNNLSH 671
>gi|125542952|gb|EAY89091.1| hypothetical protein OsI_10579 [Oryza sativa Indica Group]
Length = 691
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/454 (59%), Positives = 329/454 (72%), Gaps = 30/454 (6%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP G++VLVVDDD TCL +L++ML C Y+ TTCSQA AL +LRE + FDV++SDVH
Sbjct: 11 EFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MPDMDGF+LLE +GLEMDLPVIMMSAD R VM+GI+HGACDYLIKP+R EELKNIWQH
Sbjct: 71 MPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQH 130
Query: 149 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 208
V+RK++NENKEHE+SGSL++TD + +++ EYASS N+G EG++K+Q+K+ ++ DG
Sbjct: 131 VIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKSQKKKRDKDDD-DG 189
Query: 209 ELESDDP-STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
ELES DP ST+KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGLTRENVASH
Sbjct: 190 ELESGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASH 249
Query: 268 LQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQT 327
LQKFRLYLKR+ GI N FC P + K+GSLG D QALAASGQIPPQ
Sbjct: 250 -----LQKFRLYLKRI--AQHHAGIANPFCPPASSG-KVGSLGGLDFQALAASGQIPPQA 301
Query: 328 LAALHAELLGRPTGNLV-TAVDQPALLQATLQGPKCIPADHG---VAFGQQLVKCQSNVP 383
LAAL ELLGRPT +LV DQ +L A ++G K HG +AFGQ + KCQ+N
Sbjct: 302 LAALQDELLGRPTNSLVLPGRDQSSLRLAAVKGNK----PHGEREIAFGQPIYKCQNNAY 357
Query: 384 ENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNMLMDILHQQQQKQQNQ 442
PQS +V + F W +N LG ST LGG+ N QN N+ +LH+ QQ
Sbjct: 358 GAFPQSSPAVGGMPS-FSAWPNNKLGMADSTGTLGGMSNSQNSNI---VLHELQQ----- 408
Query: 443 QSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 476
Q + LS T S+ V+PS +V+PS+S +F A
Sbjct: 409 --QPDAMLSGTLHSLDVKPSGIVMPSQSLNTFSA 440
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 585 GEVFDLGSLRNHGFMGKGNCIPSRLAVDEFESPMNNLNY 623
G++ D G +NHGF+GKG CIPSR AVDE ESP NNL++
Sbjct: 633 GKLPDQGRGKNHGFVGKGTCIPSRFAVDEIESPTNNLSH 671
>gi|357113330|ref|XP_003558456.1| PREDICTED: uncharacterized protein LOC100821963 [Brachypodium
distachyon]
Length = 677
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/451 (57%), Positives = 329/451 (72%), Gaps = 24/451 (5%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP G++VLVVDDD TCL +L+QML +C Y+ TTCSQ+ AL +LRE + FDV++SDVH
Sbjct: 11 EFPVGMKVLVVDDDPTCLAVLKQMLVQCRYDATTCSQSTRALSMLRENRRGFDVIISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MPDMDGF+LLE +GLEMDLPVIMMSAD R VM+GI+HGACDYLIKP+R EELKNIWQH
Sbjct: 71 MPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQH 130
Query: 149 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 208
VVRK+++ NKEHE+SGSL++TD ++ +++ EYASS+N+G + ++K+Q+K+ KEEDD
Sbjct: 131 VVRKKFSGNKEHEHSGSLDDTDRNRPANNDNEYASSINDGADDSWKSQKKK-RDKEEDDS 189
Query: 209 ELESDDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
ELES DPS ++KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGLTRENVASH
Sbjct: 190 ELESGDPSNSSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASH 249
Query: 268 LQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQT 327
LQKFRLYLKR+ GITN +C P ++ ++ SLG D QALAASGQIPPQ
Sbjct: 250 -----LQKFRLYLKRI--AQHHAGITNPYCTP-ASSAQVASLGGLDFQALAASGQIPPQA 301
Query: 328 LAALHAELLGRPTGNLV-TAVDQPALLQATLQGPKCIPADHGVAFGQQLVKCQSNVPENL 386
LAAL ELLGR T ++V DQ +L A ++G K + +AFGQ + KCQ+N
Sbjct: 302 LAALQDELLGRTTTSMVLPGRDQSSLRLAAVKGNKPQ-GEREIAFGQPIFKCQNNSYGAF 360
Query: 387 PQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNMLMDILHQQQQKQQNQQSQ 445
PQS +V + F W +N LG STS LG + N QN N+ +LH+ QQ Q
Sbjct: 361 PQSSPTVGRLPS-FSAWPNNKLGMADSTSTLGNVNNSQNSNI---VLHELQQ-------Q 409
Query: 446 QQSTLSETSRSISVQPSCLVVPSRSSASFQA 476
+ LS T ++ V+PS + +PS+S +F A
Sbjct: 410 PDTMLSGTLHALDVKPSGIAMPSQSLNTFPA 440
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 53/182 (29%)
Query: 465 VVPSRSSASFQAGNSPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAV 524
V+PS+ ++FQ GN P VN NSS+ +G G +KT +
Sbjct: 508 VMPSQGISNFQTGNIPYLVN---------------------NSSIGVGSKPPGVLKTEST 546
Query: 525 IT-----GYLAPGSLSPSASSCSVTADNTSSQQVQNSNIAF-RAARQVPGLVS--NVGDI 576
+ GY+ GS SP S S Q +N+ F ++ V G S NV +
Sbjct: 547 DSLNQSFGYIC-GS-SPMDSGLL-------SSQPRNAQFGFLQSPNDVTGGWSLQNVDNY 597
Query: 577 QGSYGAKS---------------GEVFDLGSLRNHGFMGKGNCIPSRLAVDEFESPMNNL 621
+ + G G++ D G +N GF+GKG CIP+R AVDE ESP N+L
Sbjct: 598 RNTIGPSHPVSSSSSFQSSNVALGKLPDQGRGKNLGFVGKGTCIPNRFAVDEVESPTNSL 657
Query: 622 NY 623
++
Sbjct: 658 SH 659
>gi|326488979|dbj|BAJ98101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/452 (58%), Positives = 326/452 (72%), Gaps = 25/452 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G++VLVVDDD TCL +L++ML +C Y+ TTCSQA AL +LRE +G FDV++SDV
Sbjct: 11 DQFPVGMKVLVVDDDQTCLAVLKRMLIQCRYDATTCSQATRALAMLRENRGAFDVIISDV 70
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGF+LLE +GLEMDLPVIMMSAD R VM+GI+HGACDYLIKP+R EELKNIWQ
Sbjct: 71 HMPDMDGFRLLELVGLEMDLPVIMMSADSRTDLVMKGIKHGACDYLIKPVRMEELKNIWQ 130
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HVVRK++ NKEHE+SGSL++TD ++ +++ EYASS N+G E ++K+Q+K+ KEEDD
Sbjct: 131 HVVRKKFGGNKEHEHSGSLDDTDRNRPTNNDNEYASSANDGAEDSWKSQKKK-RDKEEDD 189
Query: 208 GELESDDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 266
ELES DPS +KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGLTRENVAS
Sbjct: 190 SELESGDPSNNSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVAS 249
Query: 267 HLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQ 326
H LQKFRLYLKR+ G+ N + P ++ ++ SLG D QALAASGQIPPQ
Sbjct: 250 H-----LQKFRLYLKRI--AQHHAGMGNPYGVP-ASSAQVASLGGLDFQALAASGQIPPQ 301
Query: 327 TLAALHAELLGRPTGNLV-TAVDQPALLQATLQGPKCIPADHGVAFGQQLVKCQSNVPEN 385
LAAL ELLGRPT NLV DQ +L A ++G K P +AFGQ + K Q+N
Sbjct: 302 ALAALQDELLGRPTNNLVLPGRDQSSLRLAAVKGNK--PHGEQIAFGQPIYKVQNNSYAA 359
Query: 386 LPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNMLMDILHQQQQKQQNQQS 444
LPQ+ +V + F W +N LG S S LG + N QN N+ LH+ QQ
Sbjct: 360 LPQNSPAVGRMPS-FSAWPNNKLGMADSMSALGNVNNSQNSNI---GLHELQQ------- 408
Query: 445 QQQSTLSETSRSISVQPSCLVVPSRSSASFQA 476
Q + LS T ++ V+PS +V+PS+S +F A
Sbjct: 409 QPDTMLSGTLHTLDVKPSGIVMPSQSLNTFPA 440
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 49/204 (24%)
Query: 441 NQQSQQQSTLSETSRSIS--VQPSCLVVPSRSSASFQAGNSPASVNQSCSFNRGAVVDYS 498
NQ S Q +S ++S + + V+PS+ ++FQ GN+P VNQ+
Sbjct: 491 NQASTSQPFISSHGGNLSGLMNRNSNVIPSQGISNFQTGNTPYLVNQN------------ 538
Query: 499 LLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSPSASSCSVTADNTSSQQVQNSNI 558
S+ MG G +KT + SL+ S + S Q +N+
Sbjct: 539 ---------SMGMGSKPPGVLKTEST-------DSLNQSYGYVNHMDSGLLSSQSKNAQF 582
Query: 559 AF-RAARQVPGLVS---NVGDIQGSYG---------------AKSGEVFDLGSLRNHGFM 599
F ++ V G S N+ + + G A G++ D G +N GF+
Sbjct: 583 GFLQSQNDVTGGWSSLQNMDCFRNTVGPSQPVSSSSSFHSSNAALGKLPDQGRGKNLGFV 642
Query: 600 GKGNCIPSRLAVDEFESPMNNLNY 623
GKG CIP+R AVDE ESP N+L++
Sbjct: 643 GKGTCIPNRFAVDEIESPTNSLSH 666
>gi|242041701|ref|XP_002468245.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
gi|241922099|gb|EER95243.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
Length = 686
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/462 (57%), Positives = 332/462 (71%), Gaps = 30/462 (6%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AA A +FP G++VLVVDDD TCL +L++ML C Y+VTTC QA AL +LRE + F
Sbjct: 2 AAAEARGGEFPVGMKVLVVDDDPTCLLVLKRMLLDCRYDVTTCPQATRALTMLRENRRGF 61
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREE 140
DV++SDVHMPDMDGF+LLE +GLEMDLPVIMMSAD R VM+GI+HGACDYLIKP+R E
Sbjct: 62 DVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRME 121
Query: 141 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 200
ELKNIWQHVVRK++NENK+HE+SGSL++TD ++ +++ EYASS N+G +G++K+Q+K+
Sbjct: 122 ELKNIWQHVVRKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQKKK- 180
Query: 201 SAKEEDDGELESDDP-STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 259
KE+D+ +LE+ DP ST+KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGL
Sbjct: 181 REKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGL 240
Query: 260 TRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAA 319
TRENVASH LQKFRLYLKR+ GI + F AP ++ K+ LG + QALAA
Sbjct: 241 TRENVASH-----LQKFRLYLKRI--AQHHAGIPHPFVAP-ASSAKVAPLGGLEFQALAA 292
Query: 320 SGQIPPQTLAALHAELLGRPTGNL-VTAVDQPALLQATLQGPKCIPADHG---VAFGQQL 375
SGQIPPQ LAAL ELLGRPT +L + DQ +L A ++G K HG +AFGQ +
Sbjct: 293 SGQIPPQALAALQDELLGRPTSSLALPGRDQSSLRLAAIKGNKS----HGEREIAFGQPI 348
Query: 376 VKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNMLMDILHQ 434
KCQ+N PQS SV + F W +N LG S S LG + + QN NML LH+
Sbjct: 349 YKCQNNAYGAFPQSSPSVGGLPS-FAAWPNNKLGMTDSPSTLGNVGSSQNNNML---LHE 404
Query: 435 QQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 476
QQ Q + LS T +I V+PS +V+PS+S +F A
Sbjct: 405 LQQ-------QPDTLLSGTLHNIDVKPSGVVMPSQSLNAFPA 439
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 88/215 (40%), Gaps = 70/215 (32%)
Query: 441 NQQSQQQSTLSETSRSIS--VQPSCLVVPSRSSASFQAGNSPASVNQ------------- 485
NQ S Q +S ++ + S +PS +FQ+GN P VNQ
Sbjct: 490 NQASTSQPLISSHGANLPGLINRSTNAMPSPGINNFQSGNIPYLVNQNAMGVSSRPPGVL 549
Query: 486 ------SCSFNRGAV-----VDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSL 534
S S + G + VD LLSSQS N+ + Q S D+ GS
Sbjct: 550 KTESTDSLSRSYGYIGGSTSVDSVLLSSQSKNAQYGLLQ-SQNDVS-----------GSW 597
Query: 535 SPS------ASSCSVTADNTSSQQVQNSNIAFRAARQVPGLVSNVGDIQGSYGAKSGEVF 588
SPS +S ++S Q+S + G++
Sbjct: 598 SPSQDFDSFGNSLGQGHPGSTSSNFQSSAL--------------------------GKLP 631
Query: 589 DLGSLRNHGFMGKGNCIPSRLAVDEFESPMNNLNY 623
D G RNHGF+GKG CIPSR AVDE ESP NNL++
Sbjct: 632 DQGRGRNHGFVGKGTCIPSRFAVDEVESPTNNLSH 666
>gi|414865594|tpg|DAA44151.1| TPA: putative two-component response regulator family protein
isoform 1 [Zea mays]
gi|414865595|tpg|DAA44152.1| TPA: putative two-component response regulator family protein
isoform 2 [Zea mays]
gi|414865596|tpg|DAA44153.1| TPA: putative two-component response regulator family protein
isoform 3 [Zea mays]
Length = 684
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 262/463 (56%), Positives = 329/463 (71%), Gaps = 35/463 (7%)
Query: 19 SRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
+R AD FP G++VLVVDDD TCL +L++ML C Y+VTTC QA AL +LRE +
Sbjct: 6 ARGAD------FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRR 59
Query: 79 CFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIR 138
FDV++SDVHMPDMDGF+LLE +GLEMDLPVIMMSAD R VM+GI+HGACDYLIKP+R
Sbjct: 60 GFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVR 119
Query: 139 EEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRK 198
EELKNIWQHVVRK++N NK+HE+SGSL++TD ++ +++ EYASS N+G +G++K+Q+K
Sbjct: 120 MEELKNIWQHVVRKKFNGNKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQKK 179
Query: 199 RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 258
+ KE+D+ +LES DPST+KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPG
Sbjct: 180 K-REKEDDETDLESGDPSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPG 238
Query: 259 LTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALA 318
LTRENVASH LQKFRLYLKR+ GI + F A ++ K+ LG + QALA
Sbjct: 239 LTRENVASH-----LQKFRLYLKRI--AQHHAGIPHPFVAS-ASSAKVAPLGGLEFQALA 290
Query: 319 ASGQIPPQTLAALHAELLGRPTGNL-VTAVDQPALLQATLQGPKCIPADHG---VAFGQQ 374
ASGQIPPQ LAAL ELLGRPT +L + DQ +L A ++G K HG +AFGQ
Sbjct: 291 ASGQIPPQALAALQDELLGRPTSSLALPGRDQSSLRLAAIKGNK----PHGEREIAFGQP 346
Query: 375 LVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNMLMDILH 433
+ KCQ+N QS +V + F W +N LG S++ LG + N QN NML LH
Sbjct: 347 IYKCQNNTYGAFSQSSPAVGGLPS-FAAWPNNKLGMTDSSNTLGNVGNSQNSNML---LH 402
Query: 434 QQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 476
+ QQ Q + LS T +I V+PS +V+PS+S F A
Sbjct: 403 ELQQ-------QPDTLLSGTLHNIDVKPSGVVMPSQSLNVFPA 438
>gi|359950754|gb|AEV91167.1| MYB-related protein [Triticum aestivum]
Length = 630
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 267/564 (47%), Positives = 346/564 (61%), Gaps = 62/564 (10%)
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACD 131
+LRE +G FDV++SDVHMPDM+GF+LLE +GLEMDLPVIMMSAD R VM+GI+HGACD
Sbjct: 1 MLRENRGAFDVIISDVHMPDMNGFRLLELVGLEMDLPVIMMSADSRTDLVMKGIKHGACD 60
Query: 132 YLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEG 191
YLIKP+R EELKNIWQHVVRK++ NKEHE+SGSL++TD ++ +++ EYASS N+G E
Sbjct: 61 YLIKPVRMEELKNIWQHVVRKKFGGNKEHEHSGSLDDTDRNRLTNNDNEYASSANDGAED 120
Query: 192 TFKAQRKRISAKEEDDGELESDDPST-TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRI 250
++K+Q+K+ KEEDD ELES DPS +KK RVVWSVELHQQFV+AVN LGIDKAVPK+I
Sbjct: 121 SWKSQKKK-RDKEEDDSELESGDPSNNSKKLRVVWSVELHQQFVNAVNHLGIDKAVPKKI 179
Query: 251 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLG 310
LELMNVPGLTRENVASHLQ KFRLYLKR+ G+ N + P ++ ++ SLG
Sbjct: 180 LELMNVPGLTRENVASHLQ-----KFRLYLKRI--AQHHAGMANPYGVP-ASSAQVASLG 231
Query: 311 RFDIQALAASGQIPPQTLAALHAELLGRPTGNLV-TAVDQPALLQATLQGPKCIPADHGV 369
D QALAASGQIPPQ LAAL ELLGRPT +LV DQ +L A ++G K P +
Sbjct: 232 GLDFQALAASGQIPPQALAALQDELLGRPTNSLVLPGRDQSSLRLAAVKGNK--PHGEQI 289
Query: 370 AFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGLN-PQNGNML 428
AFGQ + K Q+N LPQ+ + + F W +N LG S S LG +N QN NM
Sbjct: 290 AFGQPIYKVQNNSYAALPQNNPAAGRMPS-FSAWPNNKLGMSDSMSALGNVNNSQNSNM- 347
Query: 429 MDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGNSPASVNQSCS 488
+LH+ QQ Q + LS T ++ V+PS +V+PS+S +F PAS + S
Sbjct: 348 --VLHELQQ-------QPDTMLSGTLHTLDVKPSGIVMPSQSLNTF-----PAS--EGLS 391
Query: 489 FNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSP------SASSCS 542
N+ +++ + SQS + +TG P S+ P S SS S
Sbjct: 392 ANQNSLI----IPSQS-----------------SGFLTGI--PPSMKPELVLPTSQSSNS 428
Query: 543 VTADNTSSQQVQNSNIAFRA-ARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNHGFMGK 601
+ Q S + +PGL++ ++ S G S + + L N MG
Sbjct: 429 LLGGIDLINQASTSQPFISSHGGNLPGLMNRNSNVMPSQGISSFQTGNTPYLVNQNSMGM 488
Query: 602 GNCIPSRLAVDEFESPMNNLNYGN 625
G+ P L + +S N Y N
Sbjct: 489 GSKPPGVLKTESTDSLNQNYAYAN 512
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 47/178 (26%)
Query: 465 VVPSRSSASFQAGNSPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAV 524
V+PS+ +SFQ GN+P VNQ+ S+ MG G +KT +
Sbjct: 463 VMPSQGISSFQTGNTPYLVNQN---------------------SMGMGSKPPGVLKTEST 501
Query: 525 ITGYLAPGSLSPSASSCSVTADNTSSQQVQNSNIAF-RAARQVPGLVSNVGDIQG----- 578
SL+ + + + S Q +N+ F ++ V G S++ ++ G
Sbjct: 502 -------DSLNQNYAYANHMDSGLLSSQSKNAQFGFLQSPNDVTGGWSSLQNMDGYRNTV 554
Query: 579 -------------SYGAKSGEVFDLGSLRNHGFMGKGNCIPSRLAVDEFESPMNNLNY 623
S A G++ D G +N GF+GKG CIP+R AVDE ESP N+L++
Sbjct: 555 GPSQPVSSSSSFQSSNAALGKLPDQGRGKNLGFVGKGACIPNRFAVDEIESPTNSLSH 612
>gi|313184318|emb|CBL94183.1| putative type-b response regulator (sensor histidine kinase) [Malus
x domestica]
Length = 674
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/435 (55%), Positives = 296/435 (68%), Gaps = 29/435 (6%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
S S G+ ++ DV V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL
Sbjct: 11 STASSSGAWKSGDV-VTDQFPAGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEIAL 69
Query: 71 DILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGAC 130
+LRE K FD+V+SDVHMPDMDGFKLLE +GLEMDLPVIMMSAD S VM+G+ HGAC
Sbjct: 70 SLLRENKNGFDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDGQSVVMKGVTHGAC 129
Query: 131 DYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE 190
DYLIKP+R E LKNIWQHVVRK+ NE K+ E SGS+EE D ++ S++ +Y+SS N E
Sbjct: 130 DYLIKPVRIEALKNIWQHVVRKKKNEWKDVEQSGSVEEGDRQQKPSEDADYSSSAN---E 186
Query: 191 GTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRI 250
GT+K ++R K+E++ E DD ST KKPRVVWSVELHQQFV AVNQLGIDKAVPK+I
Sbjct: 187 GTWKNSKRR---KDEEEETDERDDSSTLKKPRVVWSVELHQQFVGAVNQLGIDKAVPKKI 243
Query: 251 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLGS 308
LELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q + NSF +P E + + S
Sbjct: 244 LELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNNLGNSFMSPQEASFGAMSS 298
Query: 309 LGRFDIQALAASGQIPPQTLAALHAELLGRPT---GNLVTAVDQPALLQATLQGPKCIPA 365
L D+Q LA +GQ+P Q+LA L A LGR T G + VDQ L + + PK
Sbjct: 299 LSGLDLQTLAVTGQLPAQSLATLQAAGLGRSTIKSGVPMPLVDQRNLF--SFENPK---- 352
Query: 366 DHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWAS-NSLGAVASTSNLGGLNPQN 424
+ F + S+ P NL I + +A + S SLGAV N G+ QN
Sbjct: 353 ---LRFAEGQHHLSSSKPMNLLHGIPTTMEAKQLANLHQSAQSLGAVNMQVNAHGV--QN 407
Query: 425 GNMLMDILHQQQQKQ 439
++LM + Q + Q
Sbjct: 408 SSLLMPVAQSQPRGQ 422
>gi|359477139|ref|XP_002275142.2| PREDICTED: two-component response regulator ARR1-like [Vitis
vinifera]
Length = 681
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/356 (62%), Positives = 263/356 (73%), Gaps = 19/356 (5%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
S S G+ +A DV VPDQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C++A AL
Sbjct: 11 STASSSGAWKAGDV-VPDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETAL 69
Query: 71 DILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGAC 130
+LR K FD+V+SDVHMPDMDGFKLLEHIGLEMDLPVIMMSAD VM+G+ HGAC
Sbjct: 70 SLLRGNKSGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGAC 129
Query: 131 DYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE 190
DYLIKP+R E LKNIWQHVVRKR NE K+ E SGS+E+ D ++ S++++Y+SS N E
Sbjct: 130 DYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEDGDRQQKPSEDVDYSSSAN---E 186
Query: 191 GTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRI 250
G +K ++R K+E+D E DD ST KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+I
Sbjct: 187 GNWKNSKRR---KDEEDDAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKI 243
Query: 251 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLGS 308
LELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q G+ NSF P E + S
Sbjct: 244 LELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNGLNNSFMGPQEATFGSISS 298
Query: 309 LGRFDIQALAASGQIPPQTLAALHAELLGRPTGNL---VTAVDQPALLQATLQGPK 361
L D+Q LA +GQ+P Q+LA L A LGR TG + VDQ L + + PK
Sbjct: 299 LNGLDLQTLAVAGQLPAQSLATLQAAGLGRSTGKSGLPMPLVDQRNLF--SFEAPK 352
>gi|356521815|ref|XP_003529546.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 679
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/355 (61%), Positives = 257/355 (72%), Gaps = 21/355 (5%)
Query: 11 SGGSGYGSSRAADV------AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCS 64
S G G S+ A V AV DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C+
Sbjct: 4 SNGKGSMSTLTASVVMKSGDAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCN 63
Query: 65 QAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRG 124
+A AL +LRE K FD+V+SDVHMPDMDGFKLLEHIGLEMDLPVIMMSAD S VM+G
Sbjct: 64 RAETALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKG 123
Query: 125 IRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASS 184
+ HGACDYLIKP+R E LKNIWQHVVRKR NE K+ E SGS EE D + SDE +Y+SS
Sbjct: 124 VTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRQPKASDEADYSSS 183
Query: 185 VNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDK 244
N EG+++ +KR +EE + ++ ST KKPRVVWSVELHQQFV+AV+QLGIDK
Sbjct: 184 AN---EGSWRNSKKRRDEEEEAEDRDDT---STLKKPRVVWSVELHQQFVAAVDQLGIDK 237
Query: 245 AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETN 303
AVPK+ILELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q + NSF +P E
Sbjct: 238 AVPKKILELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNNMNNSFLSPQEAT 292
Query: 304 V-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQATL 357
+ S+ D+Q LA +GQ+P Q+LA L A LGRPTG V P + Q L
Sbjct: 293 FGTISSINGIDLQTLAVAGQLPAQSLATLQAAGLGRPTGK--AGVPMPLMDQRNL 345
>gi|296083291|emb|CBI22927.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/356 (62%), Positives = 263/356 (73%), Gaps = 19/356 (5%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
S S G+ +A DV VPDQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C++A AL
Sbjct: 11 STASSSGAWKAGDV-VPDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETAL 69
Query: 71 DILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGAC 130
+LR K FD+V+SDVHMPDMDGFKLLEHIGLEMDLPVIMMSAD VM+G+ HGAC
Sbjct: 70 SLLRGNKSGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGAC 129
Query: 131 DYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE 190
DYLIKP+R E LKNIWQHVVRKR NE K+ E SGS+E+ D ++ S++++Y+SS N E
Sbjct: 130 DYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEDGDRQQKPSEDVDYSSSAN---E 186
Query: 191 GTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRI 250
G +K ++R K+E+D E DD ST KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+I
Sbjct: 187 GNWKNSKRR---KDEEDDAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKI 243
Query: 251 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLGS 308
LELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q G+ NSF P E + S
Sbjct: 244 LELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNGLNNSFMGPQEATFGSISS 298
Query: 309 LGRFDIQALAASGQIPPQTLAALHAELLGRPTGNL---VTAVDQPALLQATLQGPK 361
L D+Q LA +GQ+P Q+LA L A LGR TG + VDQ L + + PK
Sbjct: 299 LNGLDLQTLAVAGQLPAQSLATLQAAGLGRSTGKSGLPMPLVDQRNLF--SFEAPK 352
>gi|356564542|ref|XP_003550512.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 677
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/338 (63%), Positives = 250/338 (73%), Gaps = 19/338 (5%)
Query: 11 SGGSGYGSSRAADV------AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCS 64
S G G S+ A V AV DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C+
Sbjct: 4 SNGKGSMSTLTASVVMKSGDAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCN 63
Query: 65 QAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRG 124
+A AL +LRE K FD+V+SDVHMPDMDGFKLLEHIGLEMDLPVIMMSAD S VM+G
Sbjct: 64 RAETALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKG 123
Query: 125 IRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASS 184
+ HGACDYLIKP+R E LKNIWQHVVRKR NE K+ E SGS EE D H + SDE +Y+SS
Sbjct: 124 VTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRHPKASDEADYSSS 183
Query: 185 VNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDK 244
N EG+++ +KR +EE + ++ ST KKPRVVWSVELHQQFV+AV+QLGIDK
Sbjct: 184 AN---EGSWRNSKKRRDEEEEAEDRDDT---STLKKPRVVWSVELHQQFVAAVDQLGIDK 237
Query: 245 AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETN 303
AVPK+ILELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q + NSF P E
Sbjct: 238 AVPKKILELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNNLNNSFLGPQEAT 292
Query: 304 V-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 340
+ S+ D+Q LA +GQ+P Q+LA L A LGR T
Sbjct: 293 FGTISSINGIDLQTLAVAGQLPAQSLATLQAAGLGRST 330
>gi|255556280|ref|XP_002519174.1| sensor histidine kinase, putative [Ricinus communis]
gi|223541489|gb|EEF43038.1| sensor histidine kinase, putative [Ricinus communis]
Length = 682
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/336 (63%), Positives = 254/336 (75%), Gaps = 19/336 (5%)
Query: 11 SGGSGYGSSRAADVA------VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCS 64
S G G S+ ++ VA VPDQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C+
Sbjct: 4 SNGKGSMSTASSSVAWKAGEVVPDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCN 63
Query: 65 QAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRG 124
+A AL +LRE K +D+V+SDVHMPDMDGFKLLEHIGLEMDLPVIMMSAD S VM+G
Sbjct: 64 RAETALSLLRENKNGYDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADEAKSVVMKG 123
Query: 125 IRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASS 184
+ HGACDYLIKP+R E LKNIWQHVVRK+ NE K+ E SGS+EE D + S++ +Y+SS
Sbjct: 124 VTHGACDYLIKPVRIEALKNIWQHVVRKKRNEWKDLEQSGSVEEGDRQPKQSEDADYSSS 183
Query: 185 VNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDK 244
N EG ++ +KR K+E++ E DD ST KKPRVVWSVELHQQFV+AVNQLGIDK
Sbjct: 184 AN---EGNWRNSKKR---KDEEEEGDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDK 237
Query: 245 AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIE-T 302
AVPK+ILELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q + N+F +P E T
Sbjct: 238 AVPKKILELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNNLGNAFISPQEAT 292
Query: 303 NVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGR 338
L S D+Q LAA+GQ+P Q+LA L A LGR
Sbjct: 293 YGPLSSFNGIDLQTLAATGQLPAQSLATLQAAGLGR 328
>gi|298103716|emb|CBM42559.1| putative B-type response regulator 13 [Populus x canadensis]
Length = 670
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 252/325 (77%), Gaps = 14/325 (4%)
Query: 19 SRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
S A+ V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LRE +
Sbjct: 2 STASSGGVSDQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRN 61
Query: 79 CFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIR 138
+D+V+SDVHMPDMDGFKLLE IGLEMDLPVIMMSAD + VM+G+ HGACDYLIKPIR
Sbjct: 62 GYDIVISDVHMPDMDGFKLLELIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIR 121
Query: 139 EEELKNIWQHVVRKRWNENKEHENSGSLEE-TDHHKRGSDEIEYASSVNEGTEGTFKAQR 197
E LKNIWQHVVRKR NE K+ E SGS+EE D ++ S++ +Y+SS N EG++K +
Sbjct: 122 IEALKNIWQHVVRKRKNEWKDLEQSGSVEEGGDRPQKQSEDADYSSSAN---EGSWKNSK 178
Query: 198 KRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 257
+R K+E++ E DD ST KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+ILELMNVP
Sbjct: 179 RR---KDEEEEADERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVP 235
Query: 258 GLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIE-TNVKLGSLGRFDIQ 315
GLTRENVASH LQK+RLYL+RL+GVSQ Q G+ NSF +P E T L SL D+Q
Sbjct: 236 GLTRENVASH-----LQKYRLYLRRLSGVSQHQSGMGNSFISPQEATYGPLSSLNGLDLQ 290
Query: 316 ALAASGQIPPQTLAALHAELLGRPT 340
LAA+GQIP Q+LA L A LGR T
Sbjct: 291 TLAAAGQIPAQSLATLQAAGLGRST 315
>gi|33330870|gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]
Length = 643
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/403 (53%), Positives = 281/403 (69%), Gaps = 33/403 (8%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
S S ++ V DQFPAGLRVLVVDDD TCLRILE+ML+ CLY VT C++A +AL +L
Sbjct: 16 SSSASWKSGGDGVSDQFPAGLRVLVVDDDPTCLRILEKMLKNCLYEVTKCNRAEIALKLL 75
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYL 133
R+ + +D+V+SDVHMPDMDGFKLLE +GLEMDLPVIMMSAD + VM+G+ HGACDYL
Sbjct: 76 RDNRNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKNVVMKGVTHGACDYL 135
Query: 134 IKPIREEELKNIWQHVVRK---RWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE 190
IKP+R E LKNIWQHVVRK W E K++E SGS+E+ + ++ +++++Y+SS N E
Sbjct: 136 IKPVRIEALKNIWQHVVRKGKHEWKE-KDYEQSGSVEDGERQQKPNEDVDYSSSAN---E 191
Query: 191 GTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRI 250
G +K +KR +E+ + + +S ST KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+I
Sbjct: 192 GNWKNSKKRKDDEEDQEEKDDS---STLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKI 248
Query: 251 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCA-PIETNVKLGS 308
LELMNVPGLTRENVASH LQK+RLYL+R++GVSQ Q G+ NSF P T + S
Sbjct: 249 LELMNVPGLTRENVASH-----LQKYRLYLRRVSGVSQHQNGLNNSFMGTPDATFGSMSS 303
Query: 309 LGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQATLQGPKCIPADHG 368
+ D QALAA+GQIP Q+LA+L A +GRPT + P + Q L + H
Sbjct: 304 INGLDFQALAATGQIPAQSLASLQAAAIGRPTSK--PTISMPVVDQRNLFSFE----PHK 357
Query: 369 VAFG---QQL------VKCQSNVPENL-PQSIISVDDASTGFG 401
+ FG QQL + +P N+ P+ + S++ ++ FG
Sbjct: 358 LRFGEGQQQLNGSTKQISLLHGIPTNMEPKQLASLNQSAQTFG 400
>gi|356529278|ref|XP_003533222.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 673
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 244/469 (52%), Positives = 293/469 (62%), Gaps = 52/469 (11%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
GS S A V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C +A VAL +
Sbjct: 8 GSTSSSPLKAGDTVSDQFPAGLRVLVVDDDPTCLMILERMLRACLYEVTKCKRAEVALSL 67
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDY 132
LRE K FD+VLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSAD VM+G+ HGACDY
Sbjct: 68 LRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKQVVMKGVTHGACDY 127
Query: 133 LIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGT 192
LIKP+R E LKNIWQHVVR R N ++ E SGS+EE D +GSD+ Y+SSVNE
Sbjct: 128 LIKPVRIEALKNIWQHVVRMRKNGLRDVEQSGSMEEGDRPPKGSDDGNYSSSVNEA---- 183
Query: 193 FKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 252
K+ +KR EE D +S ST KKPRVVWSVELHQQF++ VNQLGIDKAVPK+ILE
Sbjct: 184 -KSSKKRRDEDEEGDERDDS---STLKKPRVVWSVELHQQFMAVVNQLGIDKAVPKKILE 239
Query: 253 LMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGR 311
LMNVPGLTRENVASH LQK+RLYL+RL+GVS QQG ++NSF + E S+
Sbjct: 240 LMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQQQGNLSNSFMSSQEATFGGTSING 294
Query: 312 FDIQALAASGQIPPQTLAALHAELLGRPT---GNLVTAVDQPALLQATLQGPKCIPADHG 368
D+Q L+A+GQ P Q+LA A LGR T G ++ DQ L + + P+
Sbjct: 295 IDLQTLSAAGQFPSQSLAKFQAAGLGRTTAKAGMPMSLSDQKNLF--SFENPR------- 345
Query: 369 VAFGQQLVKCQSNV-PENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGLN------ 421
+ FG+ ++ SN P NL I++ + ST LG LN
Sbjct: 346 LRFGEGSLQHLSNSKPINLLHGILT--------NMEPKQLANLHQSTQPLGSLNMRVNSP 397
Query: 422 -PQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRS-ISVQPSCLVVPS 468
QN +LM + Q + Q LSE + S ++ PS LV P+
Sbjct: 398 ATQNKPLLMQMTQSQPRGQ---------LLSENASSHVTRYPSSLVQPT 437
>gi|449464732|ref|XP_004150083.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449501499|ref|XP_004161384.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 673
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/350 (59%), Positives = 255/350 (72%), Gaps = 21/350 (6%)
Query: 18 SSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK 77
S+R A DQFPAGLRVLVVDDD TCL+ILE+ML+ C Y VT C++A +AL +LRE K
Sbjct: 21 SARKATDMSSDQFPAGLRVLVVDDDPTCLKILEKMLQNCCYAVTKCNRAEIALSMLRENK 80
Query: 78 GCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
FD+VLSDVHMPDMDGFKLLE +GLEMDLPVIMMSAD + VM+G+ HGACDYLIKP+
Sbjct: 81 NGFDIVLSDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDGKNVVMKGVIHGACDYLIKPV 140
Query: 138 REEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQR 197
R E L+N+WQHVVRKR E K+ E SGS++E D + S+ Y+SS EG++ + +
Sbjct: 141 RIEALRNLWQHVVRKRKTEWKDLEQSGSVDEGDREQNLSEGANYSSS---AYEGSWNSSK 197
Query: 198 KRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 257
+R A+EE + E DD ST KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+ILELMNVP
Sbjct: 198 RRRDAEEEPE---ERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVP 254
Query: 258 GLTRENVASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRF---D 313
GLTRENVASH LQK+RLYL+RL+GVS Q + NSF P + GS+G F D
Sbjct: 255 GLTRENVASH-----LQKYRLYLRRLSGVSPHQSNLNNSFINP--QDPPFGSMGSFNGID 307
Query: 314 IQALAASGQIPPQTLAALHAELLGRPTGN--LVTAVDQPALLQATLQGPK 361
+Q L+ +GQ+ PQ+LAAL A L RPT + A+DQ + + + PK
Sbjct: 308 LQTLSVTGQLSPQSLAALQATGLRRPTAKSGISMALDQNNIF--SFENPK 355
>gi|356556050|ref|XP_003546340.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 672
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/334 (63%), Positives = 248/334 (74%), Gaps = 18/334 (5%)
Query: 11 SGGSGYGSS---RAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
S G G SS +A D +V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C +A
Sbjct: 4 SNGKGSTSSSPLKAGD-SVSDQFPAGLRVLVVDDDPTCLMILERMLRACLYEVTKCQRAE 62
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRH 127
VAL +LRE K FD+VLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSAD VM+G+ H
Sbjct: 63 VALSLLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTH 122
Query: 128 GACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNE 187
GACDYLIKP+R E LKNIWQHV+RKR N ++ E SGS+EE D + SD+ +Y+SSVNE
Sbjct: 123 GACDYLIKPVRIEALKNIWQHVIRKRKNGLRDVEQSGSVEEGDQPPKVSDDGDYSSSVNE 182
Query: 188 GTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVP 247
++ +KR EE D + +S ST KKPRVVWSVELHQQF++AVNQLGIDKAVP
Sbjct: 183 A-----RSSKKRRDEDEEGDEKDDS---STLKKPRVVWSVELHQQFMAAVNQLGIDKAVP 234
Query: 248 KRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKL 306
K+ILELMNVPGLTRENVASH LQK+RLYL+RL+GVS QQG + NSF + E
Sbjct: 235 KKILELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQQQGNLNNSFMSSQEATFGG 289
Query: 307 GSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 340
S+ D+Q L+A+GQ P Q+LA L A LGR T
Sbjct: 290 TSINGIDLQTLSAAGQFPSQSLAKLQATGLGRTT 323
>gi|224106962|ref|XP_002314325.1| type-b response regulator [Populus trichocarpa]
gi|222863365|gb|EEF00496.1| type-b response regulator [Populus trichocarpa]
Length = 634
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 251/325 (77%), Gaps = 14/325 (4%)
Query: 19 SRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
S A+ V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LRE +
Sbjct: 12 STASSGGVSDQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRN 71
Query: 79 CFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIR 138
+D+V+SDVHMPDMDGFKLLE IGLEMDLPVIMMSAD + VM+G+ HGACDYLIKPIR
Sbjct: 72 GYDIVISDVHMPDMDGFKLLELIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIR 131
Query: 139 EEELKNIWQHVVRKRWNENKEHENSGSLEE-TDHHKRGSDEIEYASSVNEGTEGTFKAQR 197
E LKNIWQHVVRKR NE K+ E SGS+EE D ++ S++ +Y+SS N EG++K +
Sbjct: 132 IEALKNIWQHVVRKRKNEWKDLEQSGSVEEGGDRQQKQSEDADYSSSAN---EGSWKNSK 188
Query: 198 KRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 257
+R K+E++ E DD ST KKPRVVWSVELHQQFV+AV+QLGIDKAVPK+ILELMNVP
Sbjct: 189 RR---KDEEEEADERDDTSTLKKPRVVWSVELHQQFVAAVHQLGIDKAVPKKILELMNVP 245
Query: 258 GLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIE-TNVKLGSLGRFDIQ 315
GLTRENVASH LQK+RLYL+RL+GVSQ Q G+ NSF P E T L SL D+Q
Sbjct: 246 GLTRENVASH-----LQKYRLYLRRLSGVSQHQSGMGNSFINPQEATYGPLSSLNGLDLQ 300
Query: 316 ALAASGQIPPQTLAALHAELLGRPT 340
LAA+GQIP Q+LA L A LGR T
Sbjct: 301 TLAAAGQIPAQSLATLQAAGLGRST 325
>gi|449432892|ref|XP_004134232.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449503838|ref|XP_004162202.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 660
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/339 (60%), Positives = 248/339 (73%), Gaps = 24/339 (7%)
Query: 18 SSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK 77
S R A AVPDQFPAGLRVLVVDDD TCL ILE+MLR C Y+VT CS+A AL +LR+ K
Sbjct: 8 SVRKAGEAVPDQFPAGLRVLVVDDDPTCLMILEKMLRICRYDVTNCSRAEDALSLLRQNK 67
Query: 78 GCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
FD+VLSDVHMPDMDGFKLLE+IGLEMDLPVIMMS D + VM+G+ HGACDYLIKP+
Sbjct: 68 NGFDIVLSDVHMPDMDGFKLLEYIGLEMDLPVIMMSVDDGKNVVMKGVTHGACDYLIKPV 127
Query: 138 REEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQR 197
R E LKNIWQHVVRKR NE K+ E + +++ D ++ +++ +Y+SS NEG+
Sbjct: 128 RMEALKNIWQHVVRKRKNEWKDLEQT-CVDDVDRQQKTNEDADYSSSANEGSW------- 179
Query: 198 KRISAKEEDDGE--LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMN 255
R S + +DD E E DD ST KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+ILELMN
Sbjct: 180 -RNSKRRKDDVEDPEERDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMN 238
Query: 256 VPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNVKLG-SLGRFD 313
VPGLTRENVASH LQK+RLYL+RL+G++Q Q + N+F + + G L D
Sbjct: 239 VPGLTRENVASH-----LQKYRLYLRRLSGITQHQSNLNNTFMSAQDA---FGPPLNGLD 290
Query: 314 IQALAASGQIPPQTLAALHAELLGRPT---GNLVTAVDQ 349
+Q LAA+GQ+ PQ+LA L A GR T G + VDQ
Sbjct: 291 LQTLAAAGQLQPQSLATLQAAGFGRSTAKSGMPMPLVDQ 329
>gi|224130444|ref|XP_002328610.1| type-b response regulator [Populus trichocarpa]
gi|222838592|gb|EEE76957.1| type-b response regulator [Populus trichocarpa]
Length = 671
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 248/334 (74%), Gaps = 16/334 (4%)
Query: 10 SSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVA 69
S+ SG G +A+D A DQFPAGLRVLVVDDD TCL ILE+MLR C Y VT C++A +A
Sbjct: 12 STATSG-GVWKASDGA-SDQFPAGLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIA 69
Query: 70 LDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGA 129
L +LRE K +D+V+SDVHMPDMDGFKLLE IGLEMDLPVIMMSAD + VM+G+ HGA
Sbjct: 70 LSLLRENKNGYDIVISDVHMPDMDGFKLLEQIGLEMDLPVIMMSADDGKNVVMKGVTHGA 129
Query: 130 CDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEE-TDHHKRGSDEIEYASSVNEG 188
CDYLIKPIR E LKNIWQHVVRKR NE K+ E SGS+EE D ++ ++ +Y+SS NEG
Sbjct: 130 CDYLIKPIRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGGDRQQKQPEDADYSSSANEG 189
Query: 189 TEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPK 248
+ K ++ E E DD S KKPRVVWSVELHQQFV+AVNQLGIDKAVPK
Sbjct: 190 SWKNSKRRKDEEEEAE------ERDDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVPK 243
Query: 249 RILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIE-TNVKL 306
+ILELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q G+ +SF +P E T L
Sbjct: 244 KILELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNGMGSSFISPQEATYGPL 298
Query: 307 GSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 340
SL D+Q LA +GQ+P Q+LA L A LGR T
Sbjct: 299 SSLNGLDLQTLATAGQLPAQSLATLQAAGLGRST 332
>gi|298103714|emb|CBM42558.1| putative B-type response regulator 12 [Populus x canadensis]
Length = 690
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/334 (62%), Positives = 248/334 (74%), Gaps = 16/334 (4%)
Query: 10 SSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVA 69
S+ SG G +A+D A DQFPAGLRVLVVDDD TCL ILE+MLR C Y VT C++A +A
Sbjct: 12 STATSG-GVWKASDGA-SDQFPAGLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIA 69
Query: 70 LDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGA 129
L +LRE K +D+V+SDVHMPDMDGFKLLE IGLEMDLPVIMMSAD + VM+G+ HGA
Sbjct: 70 LSLLRENKNGYDIVISDVHMPDMDGFKLLEQIGLEMDLPVIMMSADDGKNVVMKGVTHGA 129
Query: 130 CDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEE-TDHHKRGSDEIEYASSVNEG 188
CDYLIKPIR E LKNIWQHVVRKR NE ++ E SGS+EE D ++ ++ +Y+SS NEG
Sbjct: 130 CDYLIKPIRIEALKNIWQHVVRKRKNEWRDLEQSGSVEEGGDRQQKQPEDADYSSSANEG 189
Query: 189 TEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPK 248
+ K ++ E E DD S KKPRVVWSVELHQQFV+AVNQLGIDKAVPK
Sbjct: 190 SWKNSKRRKDEEEETE------ERDDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVPK 243
Query: 249 RILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIE-TNVKL 306
+ILELMNVPGLTRENVASH LQK+RLYL+R++GVSQ Q G+ ++F +P E T L
Sbjct: 244 KILELMNVPGLTRENVASH-----LQKYRLYLRRVSGVSQHQNGMGSTFISPQEATYGPL 298
Query: 307 GSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 340
SL D+Q LA +GQ+P Q+LA L A LGR T
Sbjct: 299 SSLNGLDLQTLATAGQLPAQSLATLQAAGLGRST 332
>gi|94449082|gb|ABF19058.1| ARR2 [Arabidopsis thaliana]
gi|94449084|gb|ABF19059.1| ARR2 [Arabidopsis thaliana]
Length = 664
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 247/344 (71%), Gaps = 21/344 (6%)
Query: 7 IVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQA 66
+V G G S AA + D FPA LRVLVVDDD TCL ILE+ML CLY VT C++A
Sbjct: 1 MVNPGHGRGPDSGTAAGGSNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRA 60
Query: 67 AVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIR 126
+AL +LR+ K FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+
Sbjct: 61 EIALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVT 120
Query: 127 HGACDYLIKPIREEELKNIWQHVVRKRWNE-NKEHENSGSLEET-------DHHKRGSDE 178
HGA DYLIKP+R E LKNIWQHVVRK+ NE N + GS+E+T H+ +D
Sbjct: 121 HGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDAD- 179
Query: 179 IEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVN 238
+SSVNEG ++ RKR + +D G+ + +D S+ KKPRVVWSVELHQQFV+AVN
Sbjct: 180 -NNSSSVNEGNG---RSSRKRKEEEVDDQGD-DKEDSSSLKKPRVVWSVELHQQFVAAVN 234
Query: 239 QLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITN-SFC 297
QLG+DKAVPK+ILE+MNVPGLTRENVASH LQK+R+YL+RL GVSQ GI N SF
Sbjct: 235 QLGVDKAVPKKILEMMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGIMNHSFM 289
Query: 298 APIETNV-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 340
+ + L SL FD+Q+LA +GQ+PPQ+LA L A LGRPT
Sbjct: 290 TGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPT 333
>gi|357449081|ref|XP_003594816.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355483864|gb|AES65067.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 606
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/315 (62%), Positives = 233/315 (73%), Gaps = 14/315 (4%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C +A VAL +LRE K FD+VLS
Sbjct: 25 VSDQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLS 84
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
DVHMPDMDGFKLLEHIGLEMDLPVIMMSAD + VM+G+ HGACDYLIKP+R E LKNI
Sbjct: 85 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNI 144
Query: 146 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 205
WQHVVRKR N K+ SG L+E D K+ S + Y+SS NEG K+ +KR ++E
Sbjct: 145 WQHVVRKRKNSWKDLRQSGGLDERDREKKASTDANYSSSTNEG-----KSSKKRRDEEDE 199
Query: 206 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
D + ST+KKPRVVWS+ELHQQF++ VNQLG+DKAVPK+I+E+MNVPGLTRENVA
Sbjct: 200 ADDRDDC---STSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVA 256
Query: 266 SHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIP 324
SH LQK+RLYL+RL+GVS QQ + NSF + E+ S+ D+Q L+ASGQ
Sbjct: 257 SH-----LQKYRLYLRRLSGVSQQQSNLNNSFMSAQESIFGGTSVNEIDLQTLSASGQFS 311
Query: 325 PQTLAALHAELLGRP 339
Q+LA L A L P
Sbjct: 312 AQSLAKLQAAGLYSP 326
>gi|240255903|ref|NP_193346.4| two-component response regulator ARR2 [Arabidopsis thaliana]
gi|50400708|sp|Q9ZWJ9.1|ARR2_ARATH RecName: Full=Two-component response regulator ARR2; AltName:
Full=Receiver-like protein 5
gi|4210451|dbj|BAA74527.1| ARR2 protein [Arabidopsis thaliana]
gi|51969616|dbj|BAD43500.1| hypothetical protein [Arabidopsis thaliana]
gi|51970060|dbj|BAD43722.1| hypothetical protein [Arabidopsis thaliana]
gi|51971425|dbj|BAD44377.1| hypothetical protein [Arabidopsis thaliana]
gi|94958295|gb|ABF47278.1| ARR2 [Arabidopsis thaliana]
gi|94958297|gb|ABF47279.1| ARR2 [Arabidopsis thaliana]
gi|332658294|gb|AEE83694.1| two-component response regulator ARR2, partial [Arabidopsis
thaliana]
Length = 664
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/344 (58%), Positives = 247/344 (71%), Gaps = 21/344 (6%)
Query: 7 IVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQA 66
+V G G S AA + D FPA LRVLVVDDD TCL ILE+ML CLY VT C++A
Sbjct: 1 MVNPGHGRGPDSGTAAGGSNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRA 60
Query: 67 AVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIR 126
AL +LR+ K FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+
Sbjct: 61 ESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVT 120
Query: 127 HGACDYLIKPIREEELKNIWQHVVRKRWNE-NKEHENSGSLEET-------DHHKRGSDE 178
HGA DYLIKP+R E LKNIWQHVVRK+ NE N + GS+E+T H+ +D
Sbjct: 121 HGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDAD- 179
Query: 179 IEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVN 238
+SSVNEG ++ RKR + +D G+ + +D S+ KKPRVVWSVELHQQFV+AVN
Sbjct: 180 -NNSSSVNEGNG---RSSRKRKEEEVDDQGD-DKEDSSSLKKPRVVWSVELHQQFVAAVN 234
Query: 239 QLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFC 297
QLG+DKAVPK+ILE+MNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + +SF
Sbjct: 235 QLGVDKAVPKKILEMMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNMNHSFM 289
Query: 298 APIETNV-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 340
+ + L SL FD+Q+LA +GQ+PPQ+LA L A LGRPT
Sbjct: 290 TGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPT 333
>gi|15810171|gb|AAL06987.1| AT3g16857/MUH15_1 [Arabidopsis thaliana]
Length = 690
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/332 (59%), Positives = 242/332 (72%), Gaps = 23/332 (6%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LR+ K FD+V+
Sbjct: 28 TVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVI 87
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+ HGA DYLIKP+R E LKN
Sbjct: 88 SDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKN 147
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDHHKR--------------GSDEI-EYASSVNEGT 189
IWQHVVRKR +E E+SGS+EET ++ G D + + +SSVNEG
Sbjct: 148 IWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGN 207
Query: 190 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 249
+ RKR + E+ G+ + +D S KKPRVVWSVELHQQFV+AVNQLG++KAVPK+
Sbjct: 208 NWR-SSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKK 266
Query: 250 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 307
ILELMNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + NSF + + L
Sbjct: 267 ILELMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS 321
Query: 308 SLGRFDIQALAASGQIPPQTLAALHAELLGRP 339
+L FD+QALA +GQ+P Q+LA L A LGRP
Sbjct: 322 TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRP 353
>gi|42564262|ref|NP_566561.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|50400604|sp|Q940D0.2|ARR1_ARATH RecName: Full=Two-component response regulator ARR1
gi|11994744|dbj|BAB03073.1| ARR1 protein [Arabidopsis thaliana]
gi|51971120|dbj|BAD44252.1| putative ARR1 protein [Arabidopsis thaliana]
gi|332642355|gb|AEE75876.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 690
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/332 (59%), Positives = 242/332 (72%), Gaps = 23/332 (6%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LR+ K FD+V+
Sbjct: 28 TVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVI 87
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+ HGA DYLIKP+R E LKN
Sbjct: 88 SDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKN 147
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDHHKR--------------GSDEI-EYASSVNEGT 189
IWQHVVRKR +E E+SGS+EET ++ G D + + +SSVNEG
Sbjct: 148 IWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGN 207
Query: 190 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 249
+ RKR + E+ G+ + +D S KKPRVVWSVELHQQFV+AVNQLG++KAVPK+
Sbjct: 208 NWR-SSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKK 266
Query: 250 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 307
ILELMNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + NSF + + L
Sbjct: 267 ILELMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS 321
Query: 308 SLGRFDIQALAASGQIPPQTLAALHAELLGRP 339
+L FD+QALA +GQ+P Q+LA L A LGRP
Sbjct: 322 TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRP 353
>gi|4210449|dbj|BAA74528.1| ARR1 protein [Arabidopsis thaliana]
Length = 669
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/332 (59%), Positives = 242/332 (72%), Gaps = 23/332 (6%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LR+ K FD+V+
Sbjct: 28 TVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVI 87
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+ HGA DYLIKP+R E LKN
Sbjct: 88 SDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKN 147
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDHHKR--------------GSDEI-EYASSVNEGT 189
IWQHVVRKR +E E+SGS+EET ++ G D + + +SSVNEG
Sbjct: 148 IWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGN 207
Query: 190 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 249
+ RKR + E+ G+ + +D S KKPRVVWSVELHQQFV+AVNQLG++KAVPK+
Sbjct: 208 NWR-SSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKK 266
Query: 250 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 307
ILELMNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + NSF + + L
Sbjct: 267 ILELMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS 321
Query: 308 SLGRFDIQALAASGQIPPQTLAALHAELLGRP 339
+L FD+QALA +GQ+P Q+LA L A LGRP
Sbjct: 322 TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRP 353
>gi|42570473|ref|NP_850600.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|222423228|dbj|BAH19591.1| AT3G16857 [Arabidopsis thaliana]
gi|332642354|gb|AEE75875.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 669
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/332 (59%), Positives = 242/332 (72%), Gaps = 23/332 (6%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LR+ K FD+V+
Sbjct: 28 TVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVI 87
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+ HGA DYLIKP+R E LKN
Sbjct: 88 SDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKN 147
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDHHKR--------------GSDEI-EYASSVNEGT 189
IWQHVVRKR +E E+SGS+EET ++ G D + + +SSVNEG
Sbjct: 148 IWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGN 207
Query: 190 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 249
+ RKR + E+ G+ + +D S KKPRVVWSVELHQQFV+AVNQLG++KAVPK+
Sbjct: 208 NWR-SSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKK 266
Query: 250 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 307
ILELMNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + NSF + + L
Sbjct: 267 ILELMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS 321
Query: 308 SLGRFDIQALAASGQIPPQTLAALHAELLGRP 339
+L FD+QALA +GQ+P Q+LA L A LGRP
Sbjct: 322 TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRP 353
>gi|388493620|gb|AFK34876.1| unknown [Medicago truncatula]
Length = 606
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/309 (62%), Positives = 230/309 (74%), Gaps = 14/309 (4%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C +A VAL +LRE K FD+VLS
Sbjct: 25 VSDQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLS 84
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
DVHMPDMDGFKLLEHIGLEMDLPVIMMSAD + VM+G+ HGACDYLIKP+R E LKNI
Sbjct: 85 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNI 144
Query: 146 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 205
WQHVVRKR N K+ SG L+E D K+ S + Y+SS NEG K+ +KR ++E
Sbjct: 145 WQHVVRKRKNSWKDLRQSGGLDERDREKKASTDANYSSSTNEG-----KSSKKRRDEEDE 199
Query: 206 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
D + ST+KKPRVVWS+ELHQQF++ VNQLG+DKAVPK+I+E+MNVPGLTRENVA
Sbjct: 200 ADDRDDC---STSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVA 256
Query: 266 SHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIP 324
S LQK+RLYL+RL+GVS QQ + NSF + E+ S+ D+Q L+ASGQ
Sbjct: 257 SR-----LQKYRLYLRRLSGVSQQQSNLNNSFMSAQESIFGGTSVNEIDLQTLSASGQFS 311
Query: 325 PQTLAALHA 333
Q+LA L A
Sbjct: 312 AQSLAKLQA 320
>gi|51968898|dbj|BAD43141.1| hypothetical protein [Arabidopsis thaliana]
Length = 664
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 246/344 (71%), Gaps = 21/344 (6%)
Query: 7 IVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQA 66
+V G G S AA + D FPA LRVLVVD D TCL ILE+ML CLY VT C++A
Sbjct: 1 MVNPGHGRGPDSGTAAGGSNSDPFPANLRVLVVDGDPTCLMILERMLMTCLYRVTKCNRA 60
Query: 67 AVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIR 126
AL +LR+ K FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+
Sbjct: 61 ESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVT 120
Query: 127 HGACDYLIKPIREEELKNIWQHVVRKRWNE-NKEHENSGSLEET-------DHHKRGSDE 178
HGA DYLIKP+R E LKNIWQHVVRK+ NE N + GS+E+T H+ +D
Sbjct: 121 HGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDAD- 179
Query: 179 IEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVN 238
+SSVNEG ++ RKR + +D G+ + +D S+ KKPRVVWSVELHQQFV+AVN
Sbjct: 180 -NNSSSVNEGNG---RSSRKRKEEEVDDQGD-DKEDSSSLKKPRVVWSVELHQQFVAAVN 234
Query: 239 QLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFC 297
QLG+DKAVPK+ILE+MNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + +SF
Sbjct: 235 QLGVDKAVPKKILEMMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNMNHSFM 289
Query: 298 APIETNV-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 340
+ + L SL FD+Q+LA +GQ+PPQ+LA L A LGRPT
Sbjct: 290 TGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPT 333
>gi|312282885|dbj|BAJ34308.1| unnamed protein product [Thellungiella halophila]
Length = 380
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/322 (61%), Positives = 238/322 (73%), Gaps = 28/322 (8%)
Query: 24 VAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVV 83
+ + DQFP+GLRVLVVDDD +CLRILEQML R +Y VT CSQA VAL+ILRERKGCFD+V
Sbjct: 1 MTISDQFPSGLRVLVVDDDTSCLRILEQMLLRLMYQVTICSQADVALNILRERKGCFDLV 60
Query: 84 LSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK 143
LSDVHMP M+G+KLL+ +GLEMDLPVIMMS DGR + VM+GI HGACDYLIKPIR EELK
Sbjct: 61 LSDVHMPGMNGYKLLQQVGLEMDLPVIMMSVDGRTTTVMKGINHGACDYLIKPIRPEELK 120
Query: 144 NIWQHVVRKRWNENKE-HENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 202
NIWQHVVR++W NKE NS +LE+ +K S +E SV+E +E + + KR
Sbjct: 121 NIWQHVVRRKWTMNKELQRNSQALED---NKNSSSSLETVFSVSECSEESKLRKNKRRVD 177
Query: 203 KEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 262
+E+++ + D + +KK RVVWS+ELHQQF SAVN LGI+KAVPKRILELMNVPGL+RE
Sbjct: 178 REDNEEDDLLDPGNNSKKSRVVWSIELHQQFASAVNHLGIEKAVPKRILELMNVPGLSRE 237
Query: 263 NVASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSLGRFD-IQALAAS 320
NVASH LQK+RLYL+RL+ GV+ Q T S+ R++ IQAL +S
Sbjct: 238 NVASH-----LQKYRLYLRRLSGGVASQIRDTE-------------SMERYENIQALVSS 279
Query: 321 GQIPPQTLAALHAELLGRPTGN 342
GQIPPQTLAA L GRP N
Sbjct: 280 GQIPPQTLAA----LFGRPVDN 297
>gi|343407542|gb|AEM23772.1| RRB2 type-b response regulator [Nicotiana tabacum]
Length = 669
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 197/343 (57%), Positives = 246/343 (71%), Gaps = 21/343 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
+QFPAGLRVLVVDDD TCLRILE+ML C Y VT ++A AL +LRE + FD+V+SDV
Sbjct: 27 NQFPAGLRVLVVDDDPTCLRILEKMLWNCHYEVTKSNRAESALSLLRENRNGFDIVISDV 86
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLEH+GLEMDLPVIMMSAD VM+G+ HGACDYLIKP+R E LKNIWQ
Sbjct: 87 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKDVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 148 HVVRKRWNE--NKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 205
HV+RK+ +E +K+ + S + E D ++ ++++Y+SS NEG G +K+ ++R ++E
Sbjct: 147 HVIRKKKHEWKDKDFDQSATAEAGDRQQKPPEDVDYSSSANEG--GNWKSSKRRKEEEDE 204
Query: 206 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
+ +S S+ KKPRVVWSVELHQQFV AVNQLGIDKAVPK+ILELMNVPGLTRENVA
Sbjct: 205 TEERDDS---SSLKKPRVVWSVELHQQFVQAVNQLGIDKAVPKKILELMNVPGLTRENVA 261
Query: 266 SHLQEINLQKFRLYLKRLNGVSQQ-GGITNSFCAPIETNVK--LGSLGRFDIQALAASGQ 322
SH LQK+RLYL+RL+GVSQ G+ NSF E+N+ S+G QALAA+ Q
Sbjct: 262 SH-----LQKYRLYLRRLSGVSQHPNGLNNSFMGHPESNIWNVFFSMG-LSFQALAATSQ 315
Query: 323 IPPQTLAALHAELLGRPTGNLVTA---VDQPALLQATLQGPKC 362
+P Q+LA L A LGR + VDQ L + + PK
Sbjct: 316 LPAQSLATLQAAALGRSATKAAISMPLVDQRNLF--SFENPKL 356
>gi|297830298|ref|XP_002883031.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
gi|297328871|gb|EFH59290.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
Length = 687
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/332 (59%), Positives = 239/332 (71%), Gaps = 24/332 (7%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LR+ K FD+V+
Sbjct: 26 TVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVI 85
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+ HGA DYLIKP+R E LKN
Sbjct: 86 SDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKN 145
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDHHKR--------------GSDEI-EYASSVNEGT 189
IWQHVVRKR +E E+SGS+EET ++ G D + + +SSVNEG
Sbjct: 146 IWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGN 205
Query: 190 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 249
+ RKR + E+ G+ + +D S KKPRVVWSVELHQQFV+AVNQLG + AVPK+
Sbjct: 206 NWR-SSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGAE-AVPKK 263
Query: 250 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 307
ILELMNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + NSF + + L
Sbjct: 264 ILELMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS 318
Query: 308 SLGRFDIQALAASGQIPPQTLAALHAELLGRP 339
+L FD+QALA +GQ+P Q+LA L LGRP
Sbjct: 319 TLNGFDLQALAVTGQLPAQSLAQLQVAGLGRP 350
>gi|109631196|gb|ABG35774.1| SRR384 [Striga asiatica]
Length = 569
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 186/306 (60%), Positives = 227/306 (74%), Gaps = 15/306 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFPAGLRVLVVDDD TCLRILE+ML+ CLY VTTC++A +AL LR+++ +D+V+SDV
Sbjct: 25 DQFPAGLRVLVVDDDPTCLRILEKMLKNCLYEVTTCNRAGIALKFLRDKRNVYDIVISDV 84
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLEH+GLEMDLPV MMSAD + VM+G+ HGACDYLIKPIR E LKNIWQ
Sbjct: 85 HMPDMDGFKLLEHVGLEMDLPVTMMSADDSKNVVMKGVTHGACDYLIKPIRMEALKNIWQ 144
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
H+VRKR +E KE + L D K D ++Y+ SV +E + +KR K+E+D
Sbjct: 145 HLVRKRQHEWKEKDLDQHLGSVDEQKLPED-LDYSLSV---SEENWNTSKKR---KDEED 197
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
++ DD S+ KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+ILELMNVPGL+RENVASH
Sbjct: 198 EAVDKDDTSSLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLSRENVASH 257
Query: 268 LQEINLQKFRLYLKRLNGVSQQGGITNSFCA-PIETNVKLGSLGRFDIQALAASGQIPP- 325
LQK+RLYL+RL+ G+ N F P + L D+QALAASGQ+PP
Sbjct: 258 -----LQKYRLYLRRLSS-QHHNGLPNPFMGLPDSPFGPMTQLSAVDLQALAASGQLPPA 311
Query: 326 QTLAAL 331
+LA +
Sbjct: 312 HSLATI 317
>gi|297804596|ref|XP_002870182.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
gi|297316018|gb|EFH46441.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
Length = 676
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/342 (56%), Positives = 242/342 (70%), Gaps = 20/342 (5%)
Query: 7 IVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQA 66
++ G G S A + D FPA LRVLVVDDD TCL ILE+ML CLY VT C++A
Sbjct: 1 MINPGHGRGPDSGTTAGGSNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRA 60
Query: 67 AVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIR 126
+AL +LR+ K FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+
Sbjct: 61 EIALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVT 120
Query: 127 HGACDYLIKPIREEELKNIWQHVVRKRWNE-NKEHENSGSLEETD-----HHKRGSDEIE 180
HGA DYLIKP+R E LKNIWQHVVRK+ N+ N + GS+E+T ++ D
Sbjct: 121 HGAVDYLIKPVRIEALKNIWQHVVRKKRNDWNVSEHSGGSIEDTGGDRDRQQQQREDADN 180
Query: 181 YASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 240
+SS+N EG +++ RKR + ++ G+ + +D S+ KKPRVVWSVELHQQFV+AVNQL
Sbjct: 181 NSSSIN---EGNWRSSRKRKEEEVDEQGD-DKEDTSSLKKPRVVWSVELHQQFVAAVNQL 236
Query: 241 GIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAP 299
G+DKAVPK+ILE+MNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + +SF
Sbjct: 237 GVDKAVPKKILEMMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNMNHSFMTG 291
Query: 300 IETNV-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 340
+ + L SL FD LA +GQ+P Q+LA A LGRPT
Sbjct: 292 QDQSFGHLSSLNGFD---LAVAGQLPAQSLAQFQAAGLGRPT 330
>gi|312283277|dbj|BAJ34504.1| unnamed protein product [Thellungiella halophila]
Length = 668
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 192/332 (57%), Positives = 238/332 (71%), Gaps = 22/332 (6%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
+V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LR+ K FD+V+
Sbjct: 26 SVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVI 85
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+ HGA DYLIKP+R E LKN
Sbjct: 86 SDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKN 145
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEI--------------EYASSVNEGTE 190
IWQHVVRKR +E E+SGS+E+T ++ + +SSVNEG
Sbjct: 146 IWQHVVRKRRSEWSVPEHSGSVEDTGERQQQQQRGGGGAAVSGGEDAADDNSSSVNEGNN 205
Query: 191 GTFKAQRKRISAKEEDDGELESD-DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 249
+ ++ +E ++ + D D S KKPRVVWSVELHQQFV+AVNQLG++KAVPK+
Sbjct: 206 WRSSSSSRKRKDEEGEEQGEDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKK 265
Query: 250 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 307
ILELMNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + NSF + + L
Sbjct: 266 ILELMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS 320
Query: 308 SLGRFDIQALAASGQIPPQTLAALHAELLGRP 339
+L FD+QALA +GQ+P Q+LA L A LGRP
Sbjct: 321 TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRP 352
>gi|302783917|ref|XP_002973731.1| type B response regulator [Selaginella moellendorffii]
gi|300158769|gb|EFJ25391.1| type B response regulator [Selaginella moellendorffii]
Length = 705
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/375 (53%), Positives = 240/375 (64%), Gaps = 41/375 (10%)
Query: 12 GGSGYGSS----RAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
G SGY SS + DQFP G+RVLVVDDD T L ILE MLRRC YNVTTC +A
Sbjct: 9 GQSGYISSPNLSTVSTDGSKDQFPVGMRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKAT 68
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRH 127
AL +LRE K FD+V+SDV+MPDMDGFKLLE +GLEMDLPVIMMS DG + VM+GI H
Sbjct: 69 TALALLREHKNDFDLVISDVYMPDMDGFKLLELVGLEMDLPVIMMSTDGDYNNVMKGITH 128
Query: 128 GACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNE 187
GACDYL+KP+R EEL+NIWQH+VRKR NE +E E E G D++E+ SS
Sbjct: 129 GACDYLLKPVRMEELRNIWQHLVRKRKNEARETETLTPAEADKLKGGGGDDVEHLSSA-- 186
Query: 188 GTEGTFKAQRKRISAKEEDDG-ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAV 246
+KR KEED+G + +S+DPS+ KKPRVVWSVELHQQFV+AVN+L IDKAV
Sbjct: 187 -------CSKKRKDVKEEDEGVDHDSEDPSSLKKPRVVWSVELHQQFVNAVNKLNIDKAV 239
Query: 247 PKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFC---APIETN 303
PK+ILELM+VPGLTRENVASH LQK+RLYLKR++ Q SF P+E
Sbjct: 240 PKKILELMDVPGLTRENVASH-----LQKYRLYLKRISAQQPQNSAGFSFGGADGPVEGR 294
Query: 304 VKLGSLGRFDIQALAASGQIPPQTLAALHAELLGR--PTGNL--VTAVDQPALLQATLQG 359
G F +QA+ A Q ++GR T NL TA+DQ LLQ + G
Sbjct: 295 ----GHGSFSLQAVPAVQQ-----------GVIGRIGTTNNLPASTALDQSGLLQLSGGG 339
Query: 360 PKCIPADHGVAFGQQ 374
P P FG Q
Sbjct: 340 PVFRPNMTPPVFGSQ 354
>gi|297814420|ref|XP_002875093.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
gi|297320931|gb|EFH51352.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
Length = 386
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 188/326 (57%), Positives = 236/326 (72%), Gaps = 33/326 (10%)
Query: 24 VAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVV 83
+A+ DQFP+GLR+L+VDDD +CL ILE+ML R +Y VT CSQA VAL ILRERK FD+V
Sbjct: 1 MAINDQFPSGLRILLVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLV 60
Query: 84 LSDVHMPDMDGFKLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
LSDVHMP M+G+KLL+ +G LE+DLPVIMMS DGR + VM GI HGACDYLIKPIR EEL
Sbjct: 61 LSDVHMPGMNGYKLLQQVGLLELDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEEL 120
Query: 143 KNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 202
KNIWQHVVR++ + KE NS +LE+ + S +E SV+E +EG+ +RK+
Sbjct: 121 KNIWQHVVRRKCVKKKELRNSQALEDN----KNSGSLETVFSVSECSEGSLMKRRKKKKK 176
Query: 203 -----KEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 257
+E+++ +L+ DP +KK RVVWS+ELHQQFV+AVN+L IDKAVPKRILELMNVP
Sbjct: 177 KRSVDREDNENDLDLLDPGNSKKSRVVWSIELHQQFVNAVNKLEIDKAVPKRILELMNVP 236
Query: 258 GLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFD-IQA 316
GL+RENVASH LQKFR+YLKRL+G + Q T S+ R++ IQA
Sbjct: 237 GLSRENVASH-----LQKFRMYLKRLSGEASQNNDTE-------------SIKRYENIQA 278
Query: 317 LAASGQIPPQTLAALHAELLGRPTGN 342
L +SGQ+ PQTLAAL+ G+P N
Sbjct: 279 LVSSGQLHPQTLAALY----GQPIDN 300
>gi|302788023|ref|XP_002975781.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
gi|300156782|gb|EFJ23410.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
Length = 660
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 228/346 (65%), Gaps = 31/346 (8%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVLVVDDD T L ILE MLRRC YNVTTC +A AL +LRE K FD+V+SDV+MPDMD
Sbjct: 1 MRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLVISDVYMPDMD 60
Query: 94 GFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
GFKLLE +GLEMDLPVIMMS DG + VM+GI HGACDYL+KP+R EEL+NIWQH+VRKR
Sbjct: 61 GFKLLELVGLEMDLPVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELRNIWQHLVRKR 120
Query: 154 WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG-ELES 212
NE +E E E G D++E+ SS +KR KEED+G + +S
Sbjct: 121 KNEARETETLTPAEADKLKGGGGDDVEHLSSA---------CSKKRKDVKEEDEGVDHDS 171
Query: 213 DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEIN 272
+DPS+ KKPRVVWSVELHQQFV+AVN+L IDKAVPK+ILELM+VPGLTRENVASH
Sbjct: 172 EDPSSLKKPRVVWSVELHQQFVNAVNKLNIDKAVPKKILELMDVPGLTRENVASH----- 226
Query: 273 LQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQTLAALH 332
LQK+RLYLKR++ Q SF ++ + G F +QA+ A Q
Sbjct: 227 LQKYRLYLKRISAQQPQNSAGFSFGG-VDGPAEGRGHGSFSLQAVPAVQQ---------- 275
Query: 333 AELLGR--PTGNL--VTAVDQPALLQATLQGPKCIPADHGVAFGQQ 374
+LGR T NL TA+DQ LLQ + GP P FG Q
Sbjct: 276 -GVLGRIGTTNNLPASTALDQSGLLQLSGGGPVFRPNMTPPVFGSQ 320
>gi|302794410|ref|XP_002978969.1| type B response regulator [Selaginella moellendorffii]
gi|300153287|gb|EFJ19926.1| type B response regulator [Selaginella moellendorffii]
Length = 580
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 191/365 (52%), Positives = 238/365 (65%), Gaps = 46/365 (12%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FPAGLRVL VDDD TCLRIL QMLR+C Y VT C++A AL +LRE K FD+++SDV
Sbjct: 19 KFPAGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVF 78
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MPDMDGFKLLE++GLEMDLPVIM S++G VM+G+ HGACDYLIKP+R EEL+NIWQH
Sbjct: 79 MPDMDGFKLLEYVGLEMDLPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQH 138
Query: 149 VVRKRWNENKEHENSGSLEETDHH-----------------KRGS--DEIEYASSVNEGT 189
VVRK+ NE ++ E SGS+E+ +R S DE E+ S G
Sbjct: 139 VVRKKRNEARDVEASGSVEDGGERNHHHHHQQQQHHSSQQQRRASTIDEGEFNSDGGGGG 198
Query: 190 EGTFKAQRKRISAKEEDDG----ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 245
+ +K ++R +DDG E ++DD ST KK RVVWSVELHQQFV+AVNQLGIDKA
Sbjct: 199 DPNWKLAKRR-----KDDGDETAEHDNDDSSTLKKQRVVWSVELHQQFVNAVNQLGIDKA 253
Query: 246 VPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITN----SFCAPIE 301
VPK+ILE M+V GLTRENVASH LQK+RLYL+RL+GV QG N +FC+P E
Sbjct: 254 VPKKILESMSVHGLTRENVASH-----LQKYRLYLRRLSGVQPQGSGANGHAVTFCSPAE 308
Query: 302 TN-VKLGSLGRFDIQALAASGQI---PPQTLAALHAELLGR--PTGNLVTAVDQPALLQA 355
+ L +LG +++ L S Q P LA++ LGR T VD L+Q
Sbjct: 309 ASFAALNALG--EMRTLPPSAQFQNSSPTALASIQGN-LGRTGAAAPAATLVDHSVLMQL 365
Query: 356 TLQGP 360
+ P
Sbjct: 366 SGASP 370
>gi|21593727|gb|AAM65694.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 382
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 225/324 (69%), Gaps = 32/324 (9%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
+ DQFP+GLR+LVVDDD +CL ILE+ML R +Y VT CSQA VAL ILRERK FD+VLS
Sbjct: 3 INDQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLS 62
Query: 86 DVHMPDMDGFKLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
DVHMP M+G+ LL+ +G LEMDLPVIMMS DGR + VM GI HGACDYLIKPIR EELKN
Sbjct: 63 DVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKN 122
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI---- 200
IWQHVVR++ KE +S +LE D+ GS E SV+E +E + R +
Sbjct: 123 IWQHVVRRKCVMKKELRSSQALE--DNKNSGSLET-VVVSVSECSEESLMKCRNKKKKKK 179
Query: 201 -SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 259
S +D+ + DP +KK RVVWS+ELHQQFV+AVN+LGIDKAVPKRILELMNVPGL
Sbjct: 180 RSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGL 239
Query: 260 TRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFD-IQALA 318
+RENVASH LQKFRLYLKRL+G + Q + S R++ IQAL
Sbjct: 240 SRENVASH-----LQKFRLYLKRLSGEASQSNDSE-------------STKRYENIQALV 281
Query: 319 ASGQIPPQTLAALHAELLGRPTGN 342
+SGQ+ PQTLAA L G+P N
Sbjct: 282 SSGQLHPQTLAA----LFGQPIDN 301
>gi|15226345|ref|NP_178285.1| two-component response regulator ARR14 [Arabidopsis thaliana]
gi|50400550|sp|Q8L9Y3.2|ARR14_ARATH RecName: Full=Two-component response regulator ARR14
gi|4220473|gb|AAD12696.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|20466520|gb|AAM20577.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|22136418|gb|AAM91287.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330250401|gb|AEC05495.1| two-component response regulator ARR14 [Arabidopsis thaliana]
Length = 382
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 225/324 (69%), Gaps = 32/324 (9%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
+ DQFP+GLR+LVVDDD +CL ILE+ML R +Y VT CSQA VAL ILRERK FD+VLS
Sbjct: 3 INDQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLS 62
Query: 86 DVHMPDMDGFKLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
DVHMP M+G+ LL+ +G LEMDLPVIMMS DGR + VM GI HGACDYLIKPIR EELKN
Sbjct: 63 DVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKN 122
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI---- 200
IWQHVVR++ KE +S +LE D+ GS E SV+E +E + R +
Sbjct: 123 IWQHVVRRKCVMKKELRSSQALE--DNKNSGSLET-VVVSVSECSEESLMKCRNKKKKKK 179
Query: 201 -SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 259
S +D+ + DP +KK RVVWS+ELHQQFV+AVN+LGIDKAVPKRILELMNVPGL
Sbjct: 180 RSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGL 239
Query: 260 TRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFD-IQALA 318
+RENVASH LQKFRLYLKRL+G + Q + S R++ IQAL
Sbjct: 240 SRENVASH-----LQKFRLYLKRLSGEASQSNDSE-------------STKRYENIQALV 281
Query: 319 ASGQIPPQTLAALHAELLGRPTGN 342
+SGQ+ PQTLAA L G+P N
Sbjct: 282 SSGQLHPQTLAA----LFGQPIDN 301
>gi|302824731|ref|XP_002994006.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
gi|300138168|gb|EFJ04946.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
Length = 376
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 190/365 (52%), Positives = 238/365 (65%), Gaps = 46/365 (12%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FPAGLRVL VDDD TCLRIL QMLR+C Y VT C++A AL +LRE K FD+++SDV
Sbjct: 9 KFPAGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVF 68
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MPDMDGFKLLE++GLEMDLPVIM S++G VM+G+ HGACDYLIKP+R EEL+NIWQH
Sbjct: 69 MPDMDGFKLLEYVGLEMDLPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQH 128
Query: 149 VVRKRWNENKEHENSGSLEETDHH-----------------KRGS--DEIEYASSVNEGT 189
VVRK+ NE ++ E SGS+E+ +R S DE E+ S G
Sbjct: 129 VVRKKRNEARDVEASGSVEDGGERNHHHHHQQQQHHSSQQQRRASTIDEGEFNSDGGGGG 188
Query: 190 EGTFKAQRKRISAKEEDDG----ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 245
+ +K ++R +DDG E ++DD ST KK RVVWSVELHQQFV+AVNQLGIDKA
Sbjct: 189 DPNWKLAKRR-----KDDGDETAEHDNDDSSTLKKQRVVWSVELHQQFVNAVNQLGIDKA 243
Query: 246 VPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITN----SFCAPIE 301
VPK+ILE M+V GLTRENVASH LQK+RLYL+RL+GV QG N +FC+P +
Sbjct: 244 VPKKILESMSVHGLTRENVASH-----LQKYRLYLRRLSGVQPQGSGANGHAVTFCSPAD 298
Query: 302 TN-VKLGSLGRFDIQALAASGQI---PPQTLAALHAELLGR--PTGNLVTAVDQPALLQA 355
+ L +LG +++ L S Q P LA++ LGR T VD L+Q
Sbjct: 299 ASFAALNALG--EMRTLPPSAQFQNSSPTALASIQGN-LGRTGAAAPAATLVDHSVLMQL 355
Query: 356 TLQGP 360
+ P
Sbjct: 356 SGASP 360
>gi|449457923|ref|XP_004146697.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449505373|ref|XP_004162449.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 697
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/358 (49%), Positives = 236/358 (65%), Gaps = 18/358 (5%)
Query: 15 GYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR 74
G+ + D D FP G+RVL VDDD CL++LE +LR+C Y+VTT Q+ AL +LR
Sbjct: 5 GHSVAVVGDDGATDHFPVGMRVLAVDDDPICLKVLESLLRKCQYHVTTTKQSIEALRMLR 64
Query: 75 ERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLI 134
E + FD+V+SDV+MPDMDGFKLLE +GLEMDLPVIM+SA VM+GI HGACDYL+
Sbjct: 65 ENRNKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTELVMKGIAHGACDYLL 124
Query: 135 KPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYA-SSVNEGTEGTF 193
KP+R EELKNIWQHV+R++ E K S + + G +E+E S + F
Sbjct: 125 KPVRIEELKNIWQHVIRRKKLEPKAKNKFPSQNKV---QNGGNEVEQGFSPTSNADSAKF 181
Query: 194 KAQRKRISAKEEDDGE---LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRI 250
+RK ++D+G+ L+SDDPS KKPRVVWSVELH++FVSAVNQLG++KAVPK+I
Sbjct: 182 NRKRKDQDDDDDDEGKENGLDSDDPSNQKKPRVVWSVELHRKFVSAVNQLGLEKAVPKKI 241
Query: 251 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSL 309
L+LMNV GLTRENVASH LQK+RLYLKR++ V SQQ + +F + T +++GSL
Sbjct: 242 LDLMNVEGLTRENVASH-----LQKYRLYLKRISNVASQQANMVATFGSKDGTYMRMGSL 296
Query: 310 -GRFDIQALAASGQIPPQTLAALH-AELLGR---PTGNLVTAVDQPALLQATLQGPKC 362
G D+ A SG++P +L++ +LGR P G + + L+Q Q C
Sbjct: 297 DGYGDLHGFAGSGRLPNSSLSSYSPVGMLGRLNSPAGMSLRGITSSGLIQQNSQNLNC 354
>gi|449485185|ref|XP_004157093.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Cucumis sativus]
Length = 688
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/330 (53%), Positives = 229/330 (69%), Gaps = 25/330 (7%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL ILE +LRRC Y+VTT +QA +AL +LRE K FDVV+SDV
Sbjct: 12 DQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 131
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R++ + K+ NSG+ + D S+ E ++ N G F +RK + E+DD
Sbjct: 132 HVIRRKKFDPKDRMNSGNQDRPD-----SENGEESADPN----GKFNXKRKDQNYNEDDD 182
Query: 208 GEL--ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
+ ++DD ST KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV LTRENVA
Sbjct: 183 QDYGQDNDDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVA 242
Query: 266 SHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRF-DIQALAASGQI 323
SH LQK+RLYLKR++ V+ QQ + + + + +++GSLG + +L Q
Sbjct: 243 SH-----LQKYRLYLKRISCVANQQANMVTALSSADPSYLRIGSLGGIGNFHSLTGPPQF 297
Query: 324 PPQTLAALHAELLGRPTGNLVTAVDQPALL 353
P + ++ PT + ++ PA +
Sbjct: 298 PNTSYRSI-------PTTGMFGRLNSPACM 320
>gi|449455539|ref|XP_004145510.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 688
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/330 (53%), Positives = 229/330 (69%), Gaps = 25/330 (7%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL ILE +LRRC Y+VTT +QA +AL +LRE K FDVV+SDV
Sbjct: 12 DQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 131
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R++ + K+ NSG+ + D S+ E ++ N G F +RK + E+DD
Sbjct: 132 HVIRRKKFDPKDRMNSGNQDRPD-----SENGEESADPN----GKFNKKRKDQNYNEDDD 182
Query: 208 GEL--ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
+ ++DD ST KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV LTRENVA
Sbjct: 183 QDYGQDNDDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVA 242
Query: 266 SHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRF-DIQALAASGQI 323
SH LQK+RLYLKR++ V+ QQ + + + + +++GSLG + +L Q
Sbjct: 243 SH-----LQKYRLYLKRISCVANQQANMVTALSSADPSYLRIGSLGGIGNFHSLTGPPQF 297
Query: 324 PPQTLAALHAELLGRPTGNLVTAVDQPALL 353
P + ++ PT + ++ PA +
Sbjct: 298 PNTSYRSI-------PTTGMFGRLNSPACM 320
>gi|302784610|ref|XP_002974077.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
gi|300158409|gb|EFJ25032.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
Length = 607
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 201/380 (52%), Positives = 244/380 (64%), Gaps = 34/380 (8%)
Query: 20 RAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC 79
+A++ + DQFPAGLRVLVVDDD TCL IL++ML RC Y+VTTC A +AL +LRE K
Sbjct: 4 QASERDMGDQFPAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKER 63
Query: 80 FDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIRE 139
FDVVLSDV MPDMDGFKLLE +GLEMDLPVIMMSA+G S VM+GI HGACDYL+KPIR
Sbjct: 64 FDVVLSDVCMPDMDGFKLLELVGLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRI 123
Query: 140 EELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR 199
+ELKNIWQHV R++ N K+ + + + D KR DE S+ +KR
Sbjct: 124 KELKNIWQHVFRRKRNILKDADGA----DHDRQKRKPDE---GDSMPAAGSAAAAGSKKR 176
Query: 200 ISAKEEDDG-ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 258
KE+DD EL+ DD +T KKPRVVWSVELHQQFV+AVNQLGIDKAVPKRILELMNV G
Sbjct: 177 KEIKEDDDEFELDMDDSNTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVQG 236
Query: 259 LTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALA 318
LTRENVASH LQK+RLYLKRL+ QQ +T S P+ ++ ++ +
Sbjct: 237 LTRENVASH-----LQKYRLYLKRLSVAQQQNAVTMSM--PLGSDPSYNAIDNLQPHPII 289
Query: 319 ASGQIPPQTLAALHAELLGRPTGNLVTA-----VDQPALLQATLQGPKCIPADH------ 367
G Q LAAL + L + A VD P L+ P+ IP ++
Sbjct: 290 TPGS--SQALAALRSVYLRTLCSSNDPAATNGVVDPPVLVVR----PRSIPPNNQRGLLL 343
Query: 368 GVAFGQQLVKCQSNVPENLP 387
GV +QL QS VP+ P
Sbjct: 344 GVGDMEQLQ--QSQVPQMRP 361
>gi|302770951|ref|XP_002968894.1| type B response regulator [Selaginella moellendorffii]
gi|300163399|gb|EFJ30010.1| type B response regulator [Selaginella moellendorffii]
Length = 602
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 197/381 (51%), Positives = 244/381 (64%), Gaps = 36/381 (9%)
Query: 20 RAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC 79
+A++ + DQFPAGLRVLVVDDD TCL IL++ML RC Y+VTTC A +AL +LRE K
Sbjct: 4 QASERDMGDQFPAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKER 63
Query: 80 FDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIRE 139
FDVVLSDV MPDMDGFKLLE +GLEMDLPVIMMSA+G S VM+GI HGACDYL+KPIR
Sbjct: 64 FDVVLSDVCMPDMDGFKLLELVGLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRI 123
Query: 140 EELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR 199
+ELKNIWQHV R++ N K+ + + + D KR DE S+ +KR
Sbjct: 124 KELKNIWQHVFRRKRNILKDADGA----DHDRQKRKPDE---GDSMPAAGSAAAAGSKKR 176
Query: 200 ISAKEEDDG-ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 258
KE+D+ EL+ DD +T KKPRVVWSVELHQQFV+AVNQLGIDKAVPKRILELMNV G
Sbjct: 177 KEIKEDDEEFELDMDDSNTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVQG 236
Query: 259 LTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALA 318
LTRENVASH LQK+RLYLKRL+ QQ +T S P+ ++ ++ +
Sbjct: 237 LTRENVASH-----LQKYRLYLKRLSVAQQQNAVTMSM--PLGSDPSYNAIDNLQPHPII 289
Query: 319 ASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQATLQG------PKCIPADH----- 367
G Q LAAL + L + + + PA ++ P+ IP ++
Sbjct: 290 TPGS--SQALAALRSAYL-----RTLCSSNDPAATNGVVEPPVLVVRPRSIPPNNQRGLL 342
Query: 368 -GVAFGQQLVKCQSNVPENLP 387
GV +QL QS VP+ P
Sbjct: 343 LGVGDMEQLQ--QSQVPQMRP 361
>gi|115449219|ref|NP_001048389.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|47497030|dbj|BAD19083.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|47497239|dbj|BAD19284.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113537920|dbj|BAF10303.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|118790756|tpd|FAA00256.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215704573|dbj|BAG94206.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767879|dbj|BAH00108.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623845|gb|EEE57977.1| hypothetical protein OsJ_08721 [Oryza sativa Japonica Group]
Length = 688
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/267 (58%), Positives = 200/267 (74%), Gaps = 11/267 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +L RC Y+VTT +QAA+AL +LRE + FD+V+SDV
Sbjct: 18 DQFPVGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDV 77
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+S +G V++GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 78 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQ 137
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRG-SDEIE-YASSVNEGTEGTFKAQRKRISAKEE 205
HV+R++++ ++ N EE + SD + + + + G +RK ++EE
Sbjct: 138 HVIRRKFS-TRDRANLDFYEECNKPPNADSDHVHGHVTCGSPDQSGRPSKKRKEYCSEEE 196
Query: 206 DDGELES---DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 262
D+GE+ + DDPS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILELMNV LTRE
Sbjct: 197 DEGEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRE 256
Query: 263 NVASHLQEINLQKFRLYLKRLNGVSQQ 289
NVASH LQK+RLYLKRL+ V+ Q
Sbjct: 257 NVASH-----LQKYRLYLKRLSAVASQ 278
>gi|218191747|gb|EEC74174.1| hypothetical protein OsI_09283 [Oryza sativa Indica Group]
Length = 688
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/267 (58%), Positives = 200/267 (74%), Gaps = 11/267 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +L RC Y+VTT +QAA+AL +LRE + FD+V+SDV
Sbjct: 18 DQFPVGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDV 77
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+S +G V++GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 78 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQ 137
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRG-SDEIE-YASSVNEGTEGTFKAQRKRISAKEE 205
HV+R++++ ++ N EE + SD + + + + G +RK ++EE
Sbjct: 138 HVIRRKFS-TRDRANLDFYEECNKPPNADSDHVHGHVTCGSPDQSGRPSKKRKEYCSEEE 196
Query: 206 DDGELES---DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 262
D+GE+ + DDPS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILELMNV LTRE
Sbjct: 197 DEGEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRE 256
Query: 263 NVASHLQEINLQKFRLYLKRLNGVSQQ 289
NVASH LQK+RLYLKRL+ V+ Q
Sbjct: 257 NVASH-----LQKYRLYLKRLSAVASQ 278
>gi|255548782|ref|XP_002515447.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223545391|gb|EEF46896.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 663
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 178/339 (52%), Positives = 228/339 (67%), Gaps = 23/339 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL +LE LRRC Y+VTT SQA AL +LRE K FD+V+SDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLLVLETFLRRCQYHVTTTSQAISALKMLRENKNKFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSAYSDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 131
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R++ +NK+ N + D RGS E +N+ K Q + ++
Sbjct: 132 HVIRRKKVDNKDQNN---FDNQDKLPRGSGEATADQKLNKKR----KDQNEDEDEDRDEH 184
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
G E++DP+T KKPRVVWSVELH++FV+AVNQLG+DKAVPK+IL+LMNV LTRENVASH
Sbjct: 185 GH-ENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNVEKLTRENVASH 243
Query: 268 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGS-LGRFDIQALAASGQIPP 325
LQK+RLYLKR++ V+ QQ + + + + +++GS LG Q +A +GQ
Sbjct: 244 -----LQKYRLYLKRISTVANQQANMVAALGSSDASYLQMGSGLG---FQGIAGAGQFHN 295
Query: 326 QTLAAL-HAELLGR---PTGNLVTAVDQPALLQ-ATLQG 359
T L + +LGR P G + + P ++Q LQG
Sbjct: 296 ATFRPLPPSGMLGRLNSPAGLGMRGLPSPGVIQLGQLQG 334
>gi|326515596|dbj|BAK07044.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 161/281 (57%), Positives = 206/281 (73%), Gaps = 17/281 (6%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AA DQFP G+RVL VDDD CL++LE +LRRC Y+VT +QA +AL +LRE + F
Sbjct: 11 AAAATCRDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAIIALRMLRENRDMF 70
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREE 140
D+V+SDVHMPDMDGFKLLE +GLEMDLPVIM+S +G VM+GI HGACDYL+KP+R E
Sbjct: 71 DLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIE 130
Query: 141 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGS-----DEIEYASSVNEGTEGTFKA 195
ELKNIWQHVVR++++ ++ N+ EE + D+++ SSV G K
Sbjct: 131 ELKNIWQHVVRRKFS-TRDSLNADMYEECNKPPSSDSDYLYDQVKCGSSVQSGRPN--KK 187
Query: 196 QRKRISAKEEDDGE---LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 252
+++ S +E++DG+ ++DDPS K+PRVVWSVELH++FV+AVN LGIDKAVPKRILE
Sbjct: 188 RKEYHSEEEDEDGDSSGQDNDDPSAPKRPRVVWSVELHRKFVTAVNHLGIDKAVPKRILE 247
Query: 253 LMNVPGLTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGI 292
LMNV LTRENVASH LQK+R+YL+RL+ V SQQ GI
Sbjct: 248 LMNVEKLTRENVASH-----LQKYRVYLRRLSAVASQQAGI 283
>gi|242066838|ref|XP_002454708.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
gi|241934539|gb|EES07684.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
Length = 675
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 218/324 (67%), Gaps = 28/324 (8%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AA V DQFP G+RVL VDDD CL++LE +LRRC Y VTT +QA VAL +LR+ + F
Sbjct: 8 AAVGRVRDQFPVGMRVLAVDDDPVCLKVLENLLRRCQYRVTTTNQAVVALRMLRQNRDLF 67
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREE 140
D+V+SDVHMPDMDGFKLLE +GLEMDLPVIM+S +G VM+GI HGACDYL+KP+R E
Sbjct: 68 DLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRLE 127
Query: 141 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGT---EGTFKAQR 197
EL+NIWQHVVR++++ N E N EE +D S + GT G +R
Sbjct: 128 ELRNIWQHVVRRKFS-NCERANIDGYEECT-RPSNADFDHVHSQITGGTPDQSGRSSKKR 185
Query: 198 KRISA-----KEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 252
K + EE +G+ E+DDPS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILE
Sbjct: 186 KEYHSEEEDEGEESNGQ-ENDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILE 244
Query: 253 LMNVPGLTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSLGR 311
LMNV LTRENVASH LQK+RLYLKRL+ V SQQ I +F N +G
Sbjct: 245 LMNVERLTRENVASH-----LQKYRLYLKRLSAVASQQASIVAAFGG----NDPFMRMGA 295
Query: 312 FD----IQALAASGQIP---PQTL 328
F+ Q+ A+S +P PQ L
Sbjct: 296 FEGLQGYQSFASSAALPSFTPQGL 319
>gi|168062796|ref|XP_001783363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665113|gb|EDQ51808.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 171/277 (61%), Positives = 203/277 (73%), Gaps = 27/277 (9%)
Query: 27 PDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
PD+FP G+RVLVVDDD TCL +LE+ML C Y VTTC +A AL +LRE G FD+V+SD
Sbjct: 5 PDEFPVGMRVLVVDDDPTCLVLLERMLILCSYRVTTCGRATDALLLLREDIGKFDLVISD 64
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
V MPDMDGFKLLE +GLEMDLPVIMMS +G SAVM G+ HGACDYLIKP+ +EL+N+W
Sbjct: 65 VDMPDMDGFKLLELVGLEMDLPVIMMSGNGETSAVMEGVIHGACDYLIKPVGIKELRNVW 124
Query: 147 QHVVRKRWNENKEHENSGSLEET---DHHKR--GSDEIEYASSVNEGTEGTFKAQRKRIS 201
QHVVRK+ E K + S+EE + KR G+D+ +Y SS + T+G +K ++R
Sbjct: 125 QHVVRKKRQEVKA-VSMKSIEEAGGCERQKRAGGADDADYTSSATDTTDGNWKLSKRR-- 181
Query: 202 AKEEDDGELE---------SDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 252
GE + +DDPST KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE
Sbjct: 182 -----KGEFKEENEDDNEENDDPSTMKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 236
Query: 253 LMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQ 289
LM V GLTRENVASH LQK+RLYLKRL+GV+ Q
Sbjct: 237 LMGVQGLTRENVASH-----LQKYRLYLKRLSGVTNQ 268
>gi|225456769|ref|XP_002274673.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
Length = 570
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/301 (55%), Positives = 208/301 (69%), Gaps = 24/301 (7%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
SG+ S R + FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL++L
Sbjct: 3 SGFCSPRT------EAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNML 56
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYL 133
RERK FD+V+SDV+MPDMDGFKLLEH+GLEMDLPVIMMS DG S VM+G++HGACDYL
Sbjct: 57 RERKDGFDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYL 116
Query: 134 IKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTF 193
+KP+R +ELKNIWQHV RK+ +E K+ E+ + E SDE + +N G G
Sbjct: 117 LKPVRMKELKNIWQHVFRKKIHEGKDVESYECMREIQMIMSRSDEFDDGHQLNGGELGAT 176
Query: 194 KAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILEL 253
+ +RK + + DD EL DPS++KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+L
Sbjct: 177 R-KRKDMENRRHDDQELV--DPSSSKKARVVWSIDLHQKFVDAVNQIGFDKVGPKKILDL 233
Query: 254 MNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ----QGGITNSFCAPIETNVKLGSL 309
MNVP LTRENVASH LQK+RLYL RL ++ +G F P GSL
Sbjct: 234 MNVPWLTRENVASH-----LQKYRLYLSRLQKENELKTSEGMKQQDFTCPA------GSL 282
Query: 310 G 310
G
Sbjct: 283 G 283
>gi|218197710|gb|EEC80137.1| hypothetical protein OsI_21925 [Oryza sativa Indica Group]
Length = 696
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/305 (54%), Positives = 213/305 (69%), Gaps = 14/305 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +LRRC Y+VT+ +QA AL +LRE + FD+V+SDV
Sbjct: 20 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDV 79
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+S +G VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 80 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 139
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRG-SDEIEYASSVNEGTE-GTFKAQRKRISAKEE 205
HVVR+++ N+E N +E + + +D Y + + G +RK + +++
Sbjct: 140 HVVRRKFG-NRERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKRKELHGEDD 198
Query: 206 DDGEL----ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 261
D+G+ E+D+PS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILELMNV LTR
Sbjct: 199 DEGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTR 258
Query: 262 ENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSL-GRFDIQALAA 319
ENVASH LQK+RLYLKRL V SQQ I +F + + +G+ G Q A
Sbjct: 259 ENVASH-----LQKYRLYLKRLGAVASQQASIVAAFGGRDPSFLHIGAFEGLQSYQPFAP 313
Query: 320 SGQIP 324
S +P
Sbjct: 314 SAALP 318
>gi|115466774|ref|NP_001056986.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|55771374|dbj|BAD72541.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113595026|dbj|BAF18900.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|118790746|tpd|FAA00255.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215736874|dbj|BAG95803.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635081|gb|EEE65213.1| hypothetical protein OsJ_20357 [Oryza sativa Japonica Group]
Length = 696
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/305 (54%), Positives = 213/305 (69%), Gaps = 14/305 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +LRRC Y+VT+ +QA AL +LRE + FD+V+SDV
Sbjct: 20 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDV 79
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+S +G VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 80 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 139
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRG-SDEIEYASSVNEGTE-GTFKAQRKRISAKEE 205
HVVR+++ N+E N +E + + +D Y + + G +RK + +++
Sbjct: 140 HVVRRKFG-NRERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKRKELHGEDD 198
Query: 206 DDGEL----ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 261
D+G+ E+D+PS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILELMNV LTR
Sbjct: 199 DEGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTR 258
Query: 262 ENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSL-GRFDIQALAA 319
ENVASH LQK+RLYLKRL V SQQ I +F + + +G+ G Q A
Sbjct: 259 ENVASH-----LQKYRLYLKRLGAVASQQASIVAAFGGRDPSFLHIGAFEGLQSYQPFAP 313
Query: 320 SGQIP 324
S +P
Sbjct: 314 SAALP 318
>gi|356515054|ref|XP_003526216.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 696
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 184/400 (46%), Positives = 252/400 (63%), Gaps = 34/400 (8%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD TCL +LE +LRRC Y+ TT +QA AL +LRE K FD+V+SDV
Sbjct: 12 DEFPVGMRVLAVDDDPTCLLVLETLLRRCQYHATTTNQAIKALALLREHKDKFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGISHGACDYLLKPVRMEELKNIWQ 131
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R++ ++KE + ++++ + + + + T K + + EE +
Sbjct: 132 HVIRRKKFDSKEKNKTRNIDKPTSNSSNGLGSSGTGNSDHNEKLTKKRKDQDEDEDEEQE 191
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
+ ++DDPS KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV LTRENVASH
Sbjct: 192 NDHDNDDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 251
Query: 268 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSL-GRFDIQALAASGQI-- 323
LQK+RLYLKR++ V+ QQ + + + +++ S+ G IQ+++ SGQ+
Sbjct: 252 -----LQKYRLYLKRISCVANQQTNMVVALGGADPSYLRMNSVSGVGHIQSISGSGQLHN 306
Query: 324 ------PP-------QTLAALHAELLGRPTGNLVTAVDQPALLQATLQGPK----CIPAD 366
PP T A L+ G P+G V + Q L+ T K +PA+
Sbjct: 307 NAFRSFPPSGIINRLNTPAGLNVH--GFPSG--VLQLSQSQNLKNTNDNLKFQSAIVPAN 362
Query: 367 ----HGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGV 402
HG+ L + Q+N Q++ +V DA T F +
Sbjct: 363 QNGVHGMTVSVGLDQLQNNKGVMSVQNLTTVFDAKTTFPI 402
>gi|168002194|ref|XP_001753799.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695206|gb|EDQ81551.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 161/259 (62%), Positives = 193/259 (74%), Gaps = 9/259 (3%)
Query: 22 ADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFD 81
A + PD FPAGLRVLVVDD+ L +LE+ML C Y VTTC +A AL +LRE FD
Sbjct: 38 AKLDTPDAFPAGLRVLVVDDEPVTLMVLEKMLTNCSYRVTTCGRATDALCLLREDIDKFD 97
Query: 82 VVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEE 141
+V+SDV+MPDMDGFKLLE +GLEMDLPVIMMS +G SAVM+GI HGACDYL+KP+R++E
Sbjct: 98 LVISDVNMPDMDGFKLLELVGLEMDLPVIMMSGNGETSAVMKGITHGACDYLLKPVRQKE 157
Query: 142 LKNIWQHVVRKRWNENKEHENSGSLEE----TDHHKRGSDEIEYASSVNEGT-EGTFKAQ 196
L+NIWQHVVRKR + K + S+EE + G D+++Y SS T +G ++ +
Sbjct: 158 LRNIWQHVVRKRRQDVKIARETKSVEEGGVCVREKRTGPDDVDYTSSATGDTGDGNWRKK 217
Query: 197 RK----RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 252
RK + E+D E E+DDPST KKPRVVWSVELHQQFVSAVNQLGID+AVPKRILE
Sbjct: 218 RKGENQTFKDETEEDVEQENDDPSTMKKPRVVWSVELHQQFVSAVNQLGIDRAVPKRILE 277
Query: 253 LMNVPGLTRENVASHLQEI 271
LM V GLTRENVASHLQ I
Sbjct: 278 LMGVHGLTRENVASHLQVI 296
>gi|118790785|tpd|FAA00259.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|222619710|gb|EEE55842.1| hypothetical protein OsJ_04457 [Oryza sativa Japonica Group]
Length = 582
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 156/254 (61%), Positives = 192/254 (75%), Gaps = 9/254 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A VALDILRERK FD+V+SDV+M
Sbjct: 6 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNM 65
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLEHIGLEMDLPVIMMS DG S VM+G++HGACDYL+KP+R +EL+NIWQHV
Sbjct: 66 PDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 125
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
RK+ +E KE E + S ++ + + ++ S T + +RK + ++D +
Sbjct: 126 YRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMR-KRKDV---DKDHAD 181
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
ES D +T KK RVVWSV+LHQ+FV+AVNQ+G DK PK+IL+LMNVPGLTRENVASH
Sbjct: 182 QESSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASH-- 239
Query: 270 EINLQKFRLYLKRL 283
LQK+RLYL RL
Sbjct: 240 ---LQKYRLYLSRL 250
>gi|218189558|gb|EEC71985.1| hypothetical protein OsI_04831 [Oryza sativa Indica Group]
Length = 582
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/254 (61%), Positives = 192/254 (75%), Gaps = 9/254 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A VALDILRERK FD+V+SDV+M
Sbjct: 6 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNM 65
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLEHIGLEMDLPVIMMS DG S VM+G++HGACDYL+KP+R +EL+NIWQHV
Sbjct: 66 PDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 125
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
RK+ +E KE E + S ++ + + ++ S T + +RK + ++D +
Sbjct: 126 YRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMR-KRKDV---DKDHAD 181
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
ES D +T KK RVVWSV+LHQ+FV+AVNQ+G DK PK+IL+LMNVPGLTRENVASH
Sbjct: 182 QESSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASH-- 239
Query: 270 EINLQKFRLYLKRL 283
LQK+RLYL RL
Sbjct: 240 ---LQKYRLYLSRL 250
>gi|413939317|gb|AFW73868.1| putative two-component response regulator family protein [Zea mays]
Length = 676
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/276 (57%), Positives = 201/276 (72%), Gaps = 15/276 (5%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
V DQFP G+RVL VDDD CL++LE +LRRC Y+VTT +QA VAL +LR+ + FD+V+S
Sbjct: 13 VRDQFPVGMRVLAVDDDPVCLKVLENLLRRCQYHVTTTNQAVVALSMLRQNRDLFDLVIS 72
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
DVHMPDMDGFKLLE +GLEMDLPVIM+S +G VM+GI HGACDYL+KP+R EEL+NI
Sbjct: 73 DVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRLEELRNI 132
Query: 146 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR------ 199
WQHVVR++++ N + N+ EE + ++ ++ + + + +KR
Sbjct: 133 WQHVVRRKFS-NCDRANNDGYEECNRPSNADFDLAHSQITAGPPDQSGRPSKKRKEYHSE 191
Query: 200 -ISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 258
EE +G+ ++DDPS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILELMNV
Sbjct: 192 EEDEGEESNGQ-DNDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVER 250
Query: 259 LTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGIT 293
LTRENVASH LQK+RLYLKRL+ V SQQ I
Sbjct: 251 LTRENVASH-----LQKYRLYLKRLSAVASQQASIV 281
>gi|168004846|ref|XP_001755122.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693715|gb|EDQ80066.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 167/266 (62%), Positives = 201/266 (75%), Gaps = 10/266 (3%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
+ +G+ + A + PD+FP G+RVLVVDD+ TCL ILEQML RC Y VTTC +A AL +L
Sbjct: 35 TAWGA-KPAKLDTPDEFPVGMRVLVVDDNPTCLMILEQMLVRCAYRVTTCGKATEALSML 93
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYL 133
RE G FDVV+SDV MPDMDGFKLLE +GLEMDLPVIM+S +G SAVM+GI HGACDYL
Sbjct: 94 REDIGKFDVVISDVDMPDMDGFKLLELVGLEMDLPVIMVSGNGETSAVMKGITHGACDYL 153
Query: 134 IKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR-----GSDEIEYASSVNEG 188
+KP+R EEL+NIWQHVVRK+ E K + S+EE +R G+D+ +Y SS +
Sbjct: 154 LKPVRIEELRNIWQHVVRKKRREVKA-VATKSVEEAGGCERPKRGGGADDADYTSSATDT 212
Query: 189 TEGTFKAQRKR---ISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 245
T+ +K ++R + E+D E E+DDPST K+PRVVWSVELHQQFVSAVNQLGIDKA
Sbjct: 213 TDSNWKLTKRRKGEFKDENEEDNEQENDDPSTLKRPRVVWSVELHQQFVSAVNQLGIDKA 272
Query: 246 VPKRILELMNVPGLTRENVASHLQEI 271
VPKRILELM V GLTRENVASHLQ I
Sbjct: 273 VPKRILELMGVQGLTRENVASHLQVI 298
>gi|359484783|ref|XP_002270833.2| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 712
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/344 (50%), Positives = 230/344 (66%), Gaps = 15/344 (4%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A + V D FP G+RVL VDDD TCL +L+ +LRRC Y VTT +QA AL +LRE K F
Sbjct: 11 AGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKMLRENKNNF 70
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREE 140
D+V+SDV MPDMDGFKLLE +GLEMDLPVIM+S+ VMRGI HGACDYL+KP+R E
Sbjct: 71 DLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSSHSDPKLVMRGITHGACDYLLKPVRIE 130
Query: 141 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRK-- 198
ELKNIWQHV+R++ ++K+ +N + ++ H G SS N G +RK
Sbjct: 131 ELKNIWQHVIRRKKIDSKD-QNKSADQDNALHADGEGGEGPPSSSNADQNGKLNRKRKDQ 189
Query: 199 -RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 257
+E ++ E++DPS+ KKPRVVWSVELH++FV+AVNQLGI+KAVPKRIL+LMNV
Sbjct: 190 NEDEEEEGEENGEENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKRILDLMNVE 249
Query: 258 GLTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSLGRF-DIQ 315
GLTRENVASH LQK+RLYLKR++ V +QQ + +F A + +++GSL F D +
Sbjct: 250 GLTRENVASH-----LQKYRLYLKRISCVATQQANMVAAFGAKDSSYMRMGSLDGFGDFR 304
Query: 316 ALAASGQIPPQTLAALHAE-LLGR---PTGNLVTAVDQPALLQA 355
LA G++ +++ +LGR P G + + L+Q
Sbjct: 305 GLAGPGRLNSTAMSSYPPSGMLGRLNSPAGLSLRGLTSSGLIQT 348
>gi|357463135|ref|XP_003601849.1| Response regulator [Medicago truncatula]
gi|355490897|gb|AES72100.1| Response regulator [Medicago truncatula]
Length = 570
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/347 (50%), Positives = 222/347 (63%), Gaps = 40/347 (11%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLEH+GLEMDLPVIMMS DG S VM+G++HGACDYL+KPIR +EL+NIWQHV
Sbjct: 73 PDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
RKR +E +E EN S E H R E+ ++ + T +RK + ++ +D
Sbjct: 133 FRKRIHEVREFENFESFESM-HLMRNGSEMSEEGNLFALEDMTSTKKRKDVDSRHDDKEF 191
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
L+S S++KK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP L+RENVASH
Sbjct: 192 LDS---SSSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLSRENVASH-- 246
Query: 270 EINLQKFRLYLKRLNGVSQQ----GGITNS---------FCAP------------IETNV 304
LQK+RLYL RL ++Q G+ +S F P + N
Sbjct: 247 ---LQKYRLYLSRLQKDNEQKSSSSGMKHSDLPSKDVGNFGFPNSANKQQNDASIDKYNY 303
Query: 305 KLGSLGRFDIQALAASGQ---IPPQTLAALHAELLGRPTGNLVTAVD 348
GSL +I+ + G I P + AA A L TGN+ A D
Sbjct: 304 SEGSLQHQNIETKSHEGNPKGIVPHSTAAEKARAL---TGNITDATD 347
>gi|242092234|ref|XP_002436607.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
gi|241914830|gb|EER87974.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
Length = 659
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 163/279 (58%), Positives = 204/279 (73%), Gaps = 19/279 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +LRRC Y+VTT +QA AL +LRE + +D+V+SDV
Sbjct: 14 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTTTNQAITALKMLRENRDTYDLVISDV 73
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+S +G +VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 74 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQ 133
Query: 148 HVVRKRWNENKE-----HENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 202
HVVR+++++ + +++ L D G ++I +S G +RK + +
Sbjct: 134 HVVRRKFSKRERSNLDIYKDFNKLPSAD-PCHGHNQITAGAS---DQSGRISKKRKEMHS 189
Query: 203 KEEDDGEL----ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 258
EEDDGE E D+PS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILELMNV
Sbjct: 190 DEEDDGEENDFQEGDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEK 249
Query: 259 LTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSF 296
LTRENVASH LQK+RLYLKRL+ V SQQ I +F
Sbjct: 250 LTRENVASH-----LQKYRLYLKRLSAVASQQASIVAAF 283
>gi|357466055|ref|XP_003603312.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355492360|gb|AES73563.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 645
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 157/291 (53%), Positives = 206/291 (70%), Gaps = 6/291 (2%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD TCL +LE +LRRC Y+VTT SQA AL +LRE K FD+V+SDV
Sbjct: 6 DRFPIGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVISDV 65
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 66 HMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQ 125
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+RK+ ++ KE + ++T A + +E + T K + + E+ +
Sbjct: 126 HVIRKKKSDPKEKNKTSKPDKTTSDSGSGLRSAGAENSDENGKLTKKRKDQDEDEDEDKE 185
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
+++DPS KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL++MNV +TRENVASH
Sbjct: 186 NGNDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVENITRENVASH 245
Query: 268 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQAL 317
LQK+RLYLKR++ V+ QQ + + + ++ +++G G F A
Sbjct: 246 -----LQKYRLYLKRISCVANQQASMVAALGSADQSYLRMGGSGHFHNNAF 291
>gi|357126386|ref|XP_003564868.1| PREDICTED: uncharacterized protein LOC100824670 [Brachypodium
distachyon]
Length = 577
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 161/266 (60%), Positives = 195/266 (73%), Gaps = 18/266 (6%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AAD V FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A VAL+ILRERK F
Sbjct: 2 AADATV---FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALEILRERKSKF 58
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREE 140
D+V+SDV+MPDMDGFKLLEHIGLEMDLPVIMMS DG S VM+G++HGACDYL+KP+R +
Sbjct: 59 DIVISDVNMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMK 118
Query: 141 ELKNIWQHVVRKRWNENKE---HENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQR 197
EL+NIWQHV RKR +E KE H++ L+ + G DE + + T R
Sbjct: 119 ELRNIWQHVYRKRMHEVKEIEGHDSCDDLQILRYGFEGFDEKGIFITADSDT------TR 172
Query: 198 KRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 257
KR ++D + +S D +T KK RVVWSV+LHQ+FV+AVNQ+G DK PK+IL+LMNVP
Sbjct: 173 KRKDL-DKDHADQDSSDGATAKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVP 231
Query: 258 GLTRENVASHLQEINLQKFRLYLKRL 283
G+TRENVASH LQK+RLYL RL
Sbjct: 232 GITRENVASH-----LQKYRLYLGRL 252
>gi|357137423|ref|XP_003570300.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 671
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 156/277 (56%), Positives = 196/277 (70%), Gaps = 15/277 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +LRRC Y+VT +QA +AL +LRE + FD+V+SDV
Sbjct: 15 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAVIALRMLRENRDMFDLVISDV 74
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+S +G VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 75 HMPDMDGFKLLELVGLEMDLPVIMLSGNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 134
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR-------I 200
HVVR++++ ++ N + EE + Y+ + + +KR
Sbjct: 135 HVVRRKFS-TPDYVNLDTYEECNKPPNADSGYVYSQVTCGSPDQNGRPNKKRKDYHSEEE 193
Query: 201 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 260
EE +G+ + DDPS K+PRVVWSVELH++FV+AVN LGIDKAVPKRILELMNV LT
Sbjct: 194 GEDEESNGQ-DDDDPSAPKRPRVVWSVELHRKFVAAVNHLGIDKAVPKRILELMNVEKLT 252
Query: 261 RENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSF 296
RENVASH LQK+RLYL+RL+ V SQQ GI S
Sbjct: 253 RENVASH-----LQKYRLYLRRLSAVASQQAGIVASL 284
>gi|356569201|ref|XP_003552793.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 557
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/260 (59%), Positives = 191/260 (73%), Gaps = 12/260 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLEH+GLEMDLPVIMMS DG S VM+G++HGACDYL+KPIR +EL+NIWQHV
Sbjct: 73 PDMDGFKLLEHVGLEMDLPVIMMSVDGETSKVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
RK+ +E KE E+ S+ H R E+ ++ + T +RK +K +D
Sbjct: 133 FRKKIHEAKEFESFESI----HLMRNGSELSDDGNLFAVEDVTSSKKRKDADSKHDDK-- 186
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
E DPS+TKK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVASH
Sbjct: 187 -ECLDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASH-- 243
Query: 270 EINLQKFRLYLKRLNGVSQQ 289
LQK+RLYL R+ + Q
Sbjct: 244 ---LQKYRLYLSRIQKENDQ 260
>gi|125538347|gb|EAY84742.1| hypothetical protein OsI_06112 [Oryza sativa Indica Group]
Length = 626
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/296 (53%), Positives = 208/296 (70%), Gaps = 26/296 (8%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL+ILE +L RC Y+VTT QAA AL +LRE K FD+V+SDV
Sbjct: 23 DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDV 82
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI HGACDYL+KP+R E+L+ IWQ
Sbjct: 83 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQ 142
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE-GTFKAQRKRISAKEE- 205
HV+R++ N + +N G+ ++ +G + NEG G + +R+ +++E
Sbjct: 143 HVIRRK---NCDAKNRGNDDDAGQKAQGMN--------NEGESIGANRNKRQSRKSRDEN 191
Query: 206 -DDGE------LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 258
DDG+ E+ D ST KKPRVVWSVELH++FV+AVNQLGI+KAVPK+IL+LMNV
Sbjct: 192 GDDGDDSDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVEN 251
Query: 259 LTRENVASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSLGRFD 313
+TRENVASH LQK+RLYLKRL+ S+Q + +F + + S G ++
Sbjct: 252 ITRENVASH-----LQKYRLYLKRLSTDASRQANLAAAFGGRNPAYINMNSFGNYN 302
>gi|413952914|gb|AFW85563.1| putative two-component response regulator family protein [Zea mays]
Length = 669
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/279 (55%), Positives = 198/279 (70%), Gaps = 15/279 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +LRRC Y+V T +QA AL +LRE + FD+V+SDV
Sbjct: 22 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVITTNQAITALKLLRENRDMFDLVISDV 81
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+S +G +VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 82 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQ 141
Query: 148 HVVRKRWNENKE-----HENSGSLEETD---HHKRGSDEIEYASSVNEGTEGTFKAQRKR 199
HVVR+++++ + +++ L D H G + +S G G + +
Sbjct: 142 HVVRRKFSKRERSNLDVYKDFNRLPGADPCHSHGHGHGQTTAGASDQSGRIGRKRKEMHS 201
Query: 200 ISAKEEDDGEL-ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 258
+ ++ + E D+PS KKPRVVWS+ELH++FV+AVNQLGIDKAVPKRILELMNV
Sbjct: 202 DEEDDGEENDFQEGDEPSAAKKPRVVWSIELHRKFVAAVNQLGIDKAVPKRILELMNVEK 261
Query: 259 LTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSF 296
LTRENVASH LQK+RLYLKRL+ V SQQ I +F
Sbjct: 262 LTRENVASH-----LQKYRLYLKRLSAVASQQASIVAAF 295
>gi|115444635|ref|NP_001046097.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|49388028|dbj|BAD25144.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113535628|dbj|BAF08011.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|118790764|tpd|FAA00257.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215713506|dbj|BAG94643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622313|gb|EEE56445.1| hypothetical protein OsJ_05635 [Oryza sativa Japonica Group]
Length = 626
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/296 (53%), Positives = 208/296 (70%), Gaps = 26/296 (8%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL+ILE +L RC Y+VTT QAA AL +LRE K FD+V+SDV
Sbjct: 23 DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDV 82
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI HGACDYL+KP+R E+L+ IWQ
Sbjct: 83 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQ 142
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE-GTFKAQRKRISAKEE- 205
HV+R++ N + +N G+ ++ +G + NEG G + +R+ +++E
Sbjct: 143 HVIRRK---NCDAKNRGNDDDAGQKAQGMN--------NEGESIGANRNKRQSRKSRDEN 191
Query: 206 -DDGE------LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 258
DDG+ E+ D ST KKPRVVWSVELH++FV+AVNQLGI+KAVPK+IL+LMNV
Sbjct: 192 GDDGDDSDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVEN 251
Query: 259 LTRENVASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSLGRFD 313
+TRENVASH LQK+RLYLKRL+ S+Q + +F + + S G ++
Sbjct: 252 ITRENVASH-----LQKYRLYLKRLSTDASRQANLAAAFGGRNPAYINMNSFGNYN 302
>gi|388504468|gb|AFK40300.1| unknown [Medicago truncatula]
Length = 570
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 174/347 (50%), Positives = 221/347 (63%), Gaps = 40/347 (11%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLL H+GLEMDLPVIMMS DG S VM+G++HGACDYL+KPIR +EL+NIWQHV
Sbjct: 73 PDMDGFKLLGHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
RKR +E +E EN S E H R E+ ++ + T +RK + ++ +D
Sbjct: 133 FRKRIHEAREFENFESFESM-HLMRNGSEMSEEGNLFALEDMTSTKKRKDVDSRHDDKEF 191
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
L+S S++KK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP L+RENVASH
Sbjct: 192 LDS---SSSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLSRENVASH-- 246
Query: 270 EINLQKFRLYLKRLNGVSQQ----GGITNS---------FCAP------------IETNV 304
LQK+RLYL RL ++Q G+ +S F P + N
Sbjct: 247 ---LQKYRLYLSRLQKDNEQKSSSSGMKHSDLPSKDVGNFGFPNSANKQQNDASIDKYNY 303
Query: 305 KLGSLGRFDIQALAASGQ---IPPQTLAALHAELLGRPTGNLVTAVD 348
GSL +I+ + G I P + AA A L TGN+ A D
Sbjct: 304 SEGSLQHQNIETKSHEGNPKGIVPHSTAAEKARAL---TGNITDATD 347
>gi|298103722|emb|CBM42562.1| putative B-type response regulator 19 [Populus x canadensis]
Length = 685
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 172/336 (51%), Positives = 226/336 (67%), Gaps = 21/336 (6%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP G+RVL VDDD CL++LE +LR+C Y VTT +QA AL++LRE + +D+V+SDV+M
Sbjct: 17 FPVGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNM 76
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLE +GLEMDLPVIM+S+ G V +GI HGA DYL+KP+R EELKNIWQHV
Sbjct: 77 PDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVYKGITHGAVDYLLKPVRLEELKNIWQHV 136
Query: 150 V-RKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR----ISAKE 204
+ RK+W + +GS + D G+ E E +S G + K RKR +
Sbjct: 137 IRRKKW---YPQDQNGSPNQ-DKGGDGAGEGEQVTSTGSGDQNG-KVNRKRKDQDEEEEG 191
Query: 205 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 264
E + ++++ KKPRVVWSVELHQ+FVSAVNQLG+DKAVPK+IL+LMNV GLTRENV
Sbjct: 192 EGEDGNDNEESGNQKKPRVVWSVELHQKFVSAVNQLGLDKAVPKKILDLMNVDGLTRENV 251
Query: 265 ASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSLGRF-DIQALAASGQ 322
ASH LQKFRLYLKRL+ G +QQ + +F A + +++GSL F D +++ GQ
Sbjct: 252 ASH-----LQKFRLYLKRLSCGANQQPNMVAAFGAKDSSYLRMGSLDGFGDFRSVHGPGQ 306
Query: 323 IPPQTLAAL-HAELLGR---PTGNLVTAVDQPALLQ 354
+ +L++ LLGR P G + + P LLQ
Sbjct: 307 LSTTSLSSYPPGSLLGRLNSPGGLTLQGIASPGLLQ 342
>gi|356507378|ref|XP_003522444.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 656
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 156/298 (52%), Positives = 215/298 (72%), Gaps = 7/298 (2%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD TCL +L+ +L+RC Y+VTT +QA AL +LRE K FD+V+SDV
Sbjct: 12 DEFPVGMRVLAVDDDPTCLLVLKTLLQRCQYHVTTTNQAIKALALLREHKDKFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANGDTKMVMKGISHGACDYLLKPVRMEELKNIWQ 131
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R++ ++KE + +L++ + + ++ + T K + + E+ +
Sbjct: 132 HVIRRKKFDSKEKNKTSNLDKPTSNSGNGLGSSGTGNSDQNEKLTKKRKDQDEDEDEDQE 191
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
+L+++DPS KKPRVVWSV+LH++FV+AVNQLGIDKAVPK+IL+LMNV LTRENVASH
Sbjct: 192 NDLDNEDPSAQKKPRVVWSVDLHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 251
Query: 268 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSL-GRFDIQALAASGQI 323
LQK+RLYLKR++ V+ QQ + + + +++ S+ G +Q L+ SGQ+
Sbjct: 252 -----LQKYRLYLKRISCVANQQANMVAALGVADPSYLRMSSVSGVGHVQTLSGSGQL 304
>gi|224143990|ref|XP_002325148.1| type-b response regulator [Populus trichocarpa]
gi|222866582|gb|EEF03713.1| type-b response regulator [Populus trichocarpa]
Length = 707
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/336 (50%), Positives = 226/336 (67%), Gaps = 21/336 (6%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP G+RVL VDDD CL++LE +LR+C Y VTT +QA AL++LRE + +D+V+SDV+M
Sbjct: 17 FPVGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNM 76
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLE +GLEMDLPVIM+S+ G V +GI HGA DYL+KP+R EELKNIWQHV
Sbjct: 77 PDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVFKGITHGAVDYLLKPVRLEELKNIWQHV 136
Query: 150 V-RKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR----ISAKE 204
+ RK+W + +GS ++ D G+ E E +S + K RKR +
Sbjct: 137 IRRKKW---YPQDQNGSPDQ-DKGGDGAGEGEQVTSTGSADQNG-KVNRKRKDQDEEEEG 191
Query: 205 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 264
E + ++++ KKPRVVWSVELHQ+FVSAVNQLG+DKAVPK+IL+LMNV GLTRENV
Sbjct: 192 EGEDGNDNEESGNQKKPRVVWSVELHQKFVSAVNQLGLDKAVPKKILDLMNVDGLTRENV 251
Query: 265 ASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSLGRF-DIQALAASGQ 322
ASH LQKFRLYLKRL+ G +QQ + +F A + +++GSL F D +++ GQ
Sbjct: 252 ASH-----LQKFRLYLKRLSCGANQQPNMVAAFGAKDSSYLRMGSLDGFGDFRSVHGPGQ 306
Query: 323 IPPQTLAAL-HAELLGR---PTGNLVTAVDQPALLQ 354
+ +L++ LLGR P G + + P LLQ
Sbjct: 307 LSTTSLSSYPPGSLLGRLNSPGGLTLQGIASPGLLQ 342
>gi|56784051|dbj|BAD82798.1| putative response regulator 11 [Oryza sativa Japonica Group]
Length = 586
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/258 (60%), Positives = 191/258 (74%), Gaps = 13/258 (5%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A VALDILRERK FD+V+SDV+M
Sbjct: 6 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNM 65
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLEHIGLEMDLPVIMMS DG S VM+G++HGACDYL+KP+R +EL+NIWQHV
Sbjct: 66 PDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 125
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
RK+ +E KE E + S ++ + + ++ S T + +RK + ++D +
Sbjct: 126 YRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMR-KRKDV---DKDHAD 181
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAV----PKRILELMNVPGLTRENVA 265
ES D +T KK RVVWSV+LHQ+FV+AVNQ+G D PK+IL+LMNVPGLTRENVA
Sbjct: 182 QESSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDSECSPKGPKKILDLMNVPGLTRENVA 241
Query: 266 SHLQEINLQKFRLYLKRL 283
SH LQK+RLYL RL
Sbjct: 242 SH-----LQKYRLYLSRL 254
>gi|224110806|ref|XP_002315642.1| type-b response regulator [Populus trichocarpa]
gi|222864682|gb|EEF01813.1| type-b response regulator [Populus trichocarpa]
Length = 250
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 156/256 (60%), Positives = 191/256 (74%), Gaps = 9/256 (3%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRVLVVDDD T L+ILE+ML+RC Y VTTC A AL++LRERKG +D+V+SDV
Sbjct: 4 DSFPAGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDV 63
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+MPDMDGFKLLEH+GLEMDLPVIMMS DG S VM+G++HGACDYL+KPIR +EL+NIWQ
Sbjct: 64 YMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 123
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV RK+ +E ++ E +E + GSD E + G + T +RK I +K +
Sbjct: 124 HVFRKKIHEVRDIEILEGIESFQMTRNGSDLYEDGHFLC-GEDLTLIKKRKDIESKHD-- 180
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
E + D ++ KK RVVWSVELHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVASH
Sbjct: 181 -EKDIGDNTSAKKARVVWSVELHQKFVKAVNQIGFDKVGPKKILDLMNVPRLTRENVASH 239
Query: 268 LQEINLQKFRLYLKRL 283
LQK+RLYL RL
Sbjct: 240 -----LQKYRLYLSRL 250
>gi|109631194|gb|ABG35773.1| SRR391 [Striga asiatica]
Length = 541
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/285 (52%), Positives = 201/285 (70%), Gaps = 7/285 (2%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
+ FP G+RVL VDDD CL++L+ +LR+C Y+V+T SQA +AL +LRE K FD+V+SDV
Sbjct: 14 ENFPVGMRVLAVDDDPICLKLLDTLLRKCQYHVSTTSQARMALKMLRENKDRFDLVISDV 73
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLL+ +GLEMDLPVIM+SA+ VM+G+ HGACDYL+KP+R EEL+NIWQ
Sbjct: 74 HMPDMDGFKLLDQVGLEMDLPVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRNIWQ 133
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQ-RKRISAKEED 206
HV+R+R + + S + + G + E + K RKR ++E
Sbjct: 134 HVIRRRKSVTRNENKSADQAKPNQIASGEGGQLGGTIPGENADQNGKTNIRKRKDEEDES 193
Query: 207 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 266
+ E++DP+T KKPRVVWS+ELH++FV+AVNQLGI+KAVPKRIL+LMNV GLTRENVAS
Sbjct: 194 EDGNENEDPATQKKPRVVWSIELHRKFVAAVNQLGIEKAVPKRILDLMNVEGLTRENVAS 253
Query: 267 HLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSLG 310
H LQK+RLYLKR++ V +QQ + +F +++G G
Sbjct: 254 H-----LQKYRLYLKRISTVATQQANMAAAFGVKDSPFMRMGPFG 293
>gi|255547918|ref|XP_002515016.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546067|gb|EEF47570.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 584
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/307 (54%), Positives = 210/307 (68%), Gaps = 22/307 (7%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
+G+ S R+ D FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +L
Sbjct: 3 NGFSSPRS------DAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALYLL 56
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYL 133
RERK +D+V+SDV+MPDMDGFKLLEH+GLEMDLPVIMMS DG S VM+G++HGACDYL
Sbjct: 57 RERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYL 116
Query: 134 IKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTF 193
+KPIR +EL+NIWQHV RK+ +E ++ E +E + GSD + + G + T
Sbjct: 117 LKPIRMKELRNIWQHVFRKKIHEVRDIEILEGMESIQMARIGSDHSD-DGYLFCGEDLTS 175
Query: 194 KAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 252
+RK I K +D DGE STTKK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+
Sbjct: 176 VKKRKDIENKHDDKDGE-----SSTTKKARVVWSVDLHQKFVKAVNQIGPDKVGPKKILD 230
Query: 253 LMNVPGLTRENVASHLQEINLQKFRLYLKRL----NGVSQQGGITNSFCAPIETNVKLGS 308
LMNVP LTRENVASH LQK+RLYL RL + + GGI S + E+ G+
Sbjct: 231 LMNVPWLTRENVASH-----LQKYRLYLSRLQKENDSKTSIGGIKQSESSLGESAGSFGT 285
Query: 309 LGRFDIQ 315
++Q
Sbjct: 286 QNSINMQ 292
>gi|226503033|ref|NP_001152300.1| two-component response regulator ARR11 [Zea mays]
gi|195654849|gb|ACG46892.1| two-component response regulator ARR11 [Zea mays]
Length = 584
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/254 (59%), Positives = 190/254 (74%), Gaps = 9/254 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A+VA+ ILRER+ FD+V+SDV+M
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNM 68
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLE IGLEMDLPVIMMS DG S VM+G++HGACDYL+KP+R +EL+NIWQHV
Sbjct: 69 PDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
RK+ +E KE E + S ++ + G + + T + +RK ++ +D +
Sbjct: 129 YRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSDTMR-KRKDVN---KDHAD 184
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
+S D +T KK RVVWSV+LHQ+FV+AVNQ+G DK PK+IL+LMNVPGLTRENVASH
Sbjct: 185 QDSSDGATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASH-- 242
Query: 270 EINLQKFRLYLKRL 283
LQK+RLYL RL
Sbjct: 243 ---LQKYRLYLSRL 253
>gi|414879149|tpg|DAA56280.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 584
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/254 (59%), Positives = 190/254 (74%), Gaps = 9/254 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A+VA+ ILRER+ FD+V+SDV+M
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNM 68
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLE IGLEMDLPVIMMS DG S VM+G++HGACDYL+KP+R +EL+NIWQHV
Sbjct: 69 PDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
RK+ +E KE E + S ++ + G + + T + +RK ++ +D +
Sbjct: 129 YRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSDTMR-KRKDVN---KDHAD 184
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
+S D +T KK RVVWSV+LHQ+FV+AVNQ+G DK PK+IL+LMNVPGLTRENVASH
Sbjct: 185 QDSSDGATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASH-- 242
Query: 270 EINLQKFRLYLKRL 283
LQK+RLYL RL
Sbjct: 243 ---LQKYRLYLSRL 253
>gi|323388735|gb|ADX60172.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 170/319 (53%), Positives = 218/319 (68%), Gaps = 37/319 (11%)
Query: 8 VQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
+Q+ G+G+ DQFP G+RVL VDDD TCL+ILE +L RC Y+VTT QAA
Sbjct: 8 LQARASGGHGAK--------DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAA 59
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRH 127
AL +LRE+K FD+V+SDVHMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI H
Sbjct: 60 TALKLLREKKDQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITH 119
Query: 128 GACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNE 187
GACDYL+KP+R E+L+ IWQHVVR+R + K NSG+ + D K+ ++ S+ E
Sbjct: 120 GACDYLLKPVRIEQLRTIWQHVVRRRSCDAK---NSGN-DNDDSGKK----LQVVSA--E 169
Query: 188 GTEGTFKAQRKRISAK----------EEDDGELESDDPSTTKKPRVVWSVELHQQFVSAV 237
G G + KRIS K + DD E+ D S+ KKPRVVWSVELH++FV+AV
Sbjct: 170 GDNGGVN-RNKRISRKGRDDNGDDGDDSDDNSNENGDSSSQKKPRVVWSVELHRKFVAAV 228
Query: 238 NQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNG-VSQQGGITNSF 296
NQLGIDKAVPK+IL+LMNV +TRENVASH LQK+RLYLKRL+ S+Q +T +F
Sbjct: 229 NQLGIDKAVPKKILDLMNVENITRENVASH-----LQKYRLYLKRLSADASRQANLTAAF 283
Query: 297 CA--PIETNVKLGSLGRFD 313
P N+ L + +++
Sbjct: 284 GGRNPAYVNMGLDAFRQYN 302
>gi|297735895|emb|CBI18671.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 173/356 (48%), Positives = 218/356 (61%), Gaps = 58/356 (16%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A + V D FP G+RVL VDDD TCL +L+ +LRRC Y VTT +QA AL +LRE K F
Sbjct: 11 AGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKMLRENKNNF 70
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREE 140
D+V+SDV MPDMDGFKLLE +GLEMDLPVIM+S+ VMRGI HGACDYL+KP+R E
Sbjct: 71 DLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSSHSDPKLVMRGITHGACDYLLKPVRIE 130
Query: 141 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 200
ELKNIWQHV+R++ ++K+ S + H
Sbjct: 131 ELKNIWQHVIRRKKIDSKDQNKSADQDNALHA---------------------------- 162
Query: 201 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 260
DGE E++DPS+ KKPRVVWSVELH++FV+AVNQLGI+KAVPKRIL+LMNV GLT
Sbjct: 163 ------DGE-ENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKRILDLMNVEGLT 215
Query: 261 RENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSLGRF-----DI 314
RENVASH LQK+RLYLKR++ V +QQ + +F A + +++GSL F
Sbjct: 216 RENVASH-----LQKYRLYLKRISCVATQQANMVAAFGAKDSSYMRMGSLDGFGHAQNSS 270
Query: 315 QALAASGQIPPQTLAALHAELL--GRPTGNLVTAVDQPALLQATLQGPKCIPADHG 368
++ G++ P L + L G PT +DQ LQ KCI G
Sbjct: 271 NSVNTHGKLQPVVLPTNQSASLFQGIPTS---LELDQ-------LQQRKCISTQRG 316
>gi|323388705|gb|ADX60157.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 170/319 (53%), Positives = 218/319 (68%), Gaps = 37/319 (11%)
Query: 8 VQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
+Q+ G+G+ DQFP G+RVL VDDD TCL+ILE +L RC Y+VTT QAA
Sbjct: 8 LQARASGGHGAK--------DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAA 59
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRH 127
AL +LRE+K FD+V+SDVHMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI H
Sbjct: 60 TALKLLREKKDQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITH 119
Query: 128 GACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNE 187
GACDYL+KP+R E+L+ IWQHVVR+R + K NSG+ + D K+ ++ S+ E
Sbjct: 120 GACDYLLKPVRIEQLRTIWQHVVRRRSCDAK---NSGN-DNDDSGKK----LQVVSA--E 169
Query: 188 GTEGTFKAQRKRISAK----------EEDDGELESDDPSTTKKPRVVWSVELHQQFVSAV 237
G G + KRIS K + DD E+ D S+ KKPRVVWSVELH++FV+AV
Sbjct: 170 GDNGGVN-RNKRISRKGRDDNGDDGDDSDDNSNENGDSSSQKKPRVVWSVELHRKFVAAV 228
Query: 238 NQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNG-VSQQGGITNSF 296
NQLGIDKAVPK+IL+LMNV +TRENVASH LQK+RLYLKRL+ S+Q +T +F
Sbjct: 229 NQLGIDKAVPKKILDLMNVENITRENVASH-----LQKYRLYLKRLSADASRQANLTAAF 283
Query: 297 CA--PIETNVKLGSLGRFD 313
P N+ L + +++
Sbjct: 284 GGRNPAYVNMGLDAFRQYN 302
>gi|356510875|ref|XP_003524159.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 584
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/264 (57%), Positives = 188/264 (71%), Gaps = 11/264 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRVLVVDDD T LRILE+ML++CLY VTTC A AL LRERK +D+V+SDV
Sbjct: 12 DAFPAGLRVLVVDDDPTWLRILEKMLKKCLYEVTTCCLATEALKKLRERKDAYDIVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+MPDMDGFKLLE +GLEMDLPVIMMS DG S VM+G++HGACDYL+KPIR +EL+NIWQ
Sbjct: 72 NMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
Query: 148 HVVRKRWNENKEHENSGSLEETDHH--KRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 205
HV RKR +E ++ E+ + H + GSD + + E ++++ + +
Sbjct: 132 HVFRKRMHEARDFESHEGFDFEGIHLMRNGSDHSDDGNLF--AVEEITSIKKRKDADNKH 189
Query: 206 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
DD E D S KK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVA
Sbjct: 190 DDKEF--GDHSPMKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 247
Query: 266 SHLQEINLQKFRLYLKRLNGVSQQ 289
SH LQK+RLYL RL + Q
Sbjct: 248 SH-----LQKYRLYLSRLQKENDQ 266
>gi|242059591|ref|XP_002458941.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
gi|241930916|gb|EES04061.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
Length = 579
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/254 (59%), Positives = 190/254 (74%), Gaps = 9/254 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A+VAL ILRER+ FD+V+SDV+M
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVALQILRERRNKFDIVISDVNM 68
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLE IGLEMDLPVIMMS DG S VM+G++HGACDYL+KP+R +EL+NIWQHV
Sbjct: 69 PDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
RK+ +E KE E + S ++ + G + + T + +RK + ++D +
Sbjct: 129 YRKKMHEVKEIEGNDSCDDLQIFRNGVEGFDERGLFMRADSDTMR-KRKDM---DKDHAD 184
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
+S D +T KK RVVWSV+LHQ+FV+AVNQ+G DK PK+IL+LM+VPGLTRENVASH
Sbjct: 185 QDSSDGATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMSVPGLTRENVASH-- 242
Query: 270 EINLQKFRLYLKRL 283
LQK+RLYL RL
Sbjct: 243 ---LQKYRLYLSRL 253
>gi|225425924|ref|XP_002267616.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
gi|297738324|emb|CBI27525.3| unnamed protein product [Vitis vinifera]
Length = 594
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/287 (55%), Positives = 203/287 (70%), Gaps = 17/287 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRVLVVDDD T L+ILE+ML++CLY VT C A AL++LRERK +D+V+SDV
Sbjct: 11 DVFPAGLRVLVVDDDPTWLKILEKMLKKCLYEVTICGLARDALNLLRERKDGYDIVISDV 70
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+MPDMDGFKLLE +GLEMDLPVIMMS DG S VM+G++HGACDYL+KPIR +EL+NIWQ
Sbjct: 71 NMPDMDGFKLLELVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV RK+ NE ++ E+ S+++ + G ++ + V+ + T +RK K +D
Sbjct: 131 HVFRKKINEVRDIESHESIDDFQIMRNGPEQSDDGYLVS--GDPTSVKKRKDTENKHDDR 188
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
DPS+ KK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVASH
Sbjct: 189 DHC---DPSSVKKARVVWSVDLHQKFVRAVNQIGFDKVGPKKILDLMNVPWLTRENVASH 245
Query: 268 LQEINLQKFRLYLKRLNG----VSQQGGITNSFCAPIETNVKLGSLG 310
LQK+RLYL RL + GGI +S +P ++ GS G
Sbjct: 246 -----LQKYRLYLSRLQKEDDLKTSCGGIKHSDLSPKDST---GSFG 284
>gi|162460462|ref|NP_001104863.1| response regulator 9 [Zea mays]
gi|14189890|dbj|BAB55874.1| response regulator 9 [Zea mays]
Length = 631
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/319 (53%), Positives = 217/319 (68%), Gaps = 37/319 (11%)
Query: 8 VQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
+Q+ G+G+ DQFP G+RVL VDDD TCL+ILE +L RC Y+VTT QAA
Sbjct: 8 LQARASGGHGAK--------DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAA 59
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRH 127
AL +LRE+K FD+V+SDVHMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI H
Sbjct: 60 TALKLLREKKDQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITH 119
Query: 128 GACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNE 187
GACDYL+KP+R E+L+ IWQHVVR+R + K NSG+ + D K+ ++ S E
Sbjct: 120 GACDYLLKPVRIEQLRTIWQHVVRRRSCDAK---NSGN-DNDDSGKK----LQVVSV--E 169
Query: 188 GTEGTFKAQRKRISAK----------EEDDGELESDDPSTTKKPRVVWSVELHQQFVSAV 237
G G + KRIS K + DD E+ D S+ KKPRVVWSVELH++FV+AV
Sbjct: 170 GDNGGVN-RNKRISRKGRDDNGDDGDDSDDNSNENGDSSSQKKPRVVWSVELHRKFVAAV 228
Query: 238 NQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNG-VSQQGGITNSF 296
NQLGIDKAVPK+IL+LMNV +TRENVASH LQK+RLYLKRL+ S+Q +T +F
Sbjct: 229 NQLGIDKAVPKKILDLMNVENITRENVASH-----LQKYRLYLKRLSADASRQANLTAAF 283
Query: 297 CA--PIETNVKLGSLGRFD 313
P N+ L + +++
Sbjct: 284 GGRNPAYVNMGLDAFRQYN 302
>gi|356562101|ref|XP_003549312.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 667
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/303 (53%), Positives = 211/303 (69%), Gaps = 17/303 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL +LE +LRRC Y+VTT A AL++LRE K FD+V+SDV
Sbjct: 14 DQFPIGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALNLLRENKTMFDLVISDV 73
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+S + VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 74 HMPDMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQ 133
Query: 148 HVVRKRWNENKEHENSGSLEETDH---HKRGSDEIEYASSVNEGTEGTFKAQRK--RISA 202
HV+R++ ++KE + ++T+ + RGS A++ N G +RK
Sbjct: 134 HVIRRKKIDSKEQNKTSDYDKTNSDSGNGRGS-----AATGNSDQNGKPSKKRKDQDEDD 188
Query: 203 KEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 262
EE+D + +++DPST KKPRVVWSVELH++FVSAVN LGIDKAVPK+IL+LMN LTRE
Sbjct: 189 DEENDTDHDNEDPSTQKKPRVVWSVELHRKFVSAVNLLGIDKAVPKKILDLMNDEKLTRE 248
Query: 263 NVASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSL-GRFDIQALAAS 320
NVASH LQK+RLYLKR++ G ++Q + + + +++GSL G +Q L
Sbjct: 249 NVASH-----LQKYRLYLKRISCGANRQANMVAALGTADSSYLRMGSLSGVGHLQTLTGP 303
Query: 321 GQI 323
Q
Sbjct: 304 QQF 306
>gi|356538109|ref|XP_003537547.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 585
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/260 (60%), Positives = 191/260 (73%), Gaps = 9/260 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLEH+GLEMDLPVIMMS DG S VM+G++HGACDYL+KPIR +EL+NIWQHV
Sbjct: 73 PDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
+RKR +E KE E+ S E H R E+ ++ + T +RK K +D
Sbjct: 133 LRKRIHEAKEFESFESFESI-HLMRNGSELSDDGNLFAVEDVTSTKKRKDADNKHDDK-- 189
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
E DPS+TKK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVASH
Sbjct: 190 -ECLDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASH-- 246
Query: 270 EINLQKFRLYLKRLNGVSQQ 289
LQK+RLYL R+ + Q
Sbjct: 247 ---LQKYRLYLSRIQKENDQ 263
>gi|357138369|ref|XP_003570765.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 615
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/336 (50%), Positives = 215/336 (63%), Gaps = 43/336 (12%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD TCL++LE +L RC Y+VTT QAA AL +LRE K FD+V+SDV
Sbjct: 15 DRFPVGMRVLAVDDDPTCLKVLESLLLRCDYHVTTTGQAATALRMLRENKDRFDLVISDV 74
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI HGACDYL+KP+R E+LK IWQ
Sbjct: 75 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQ 134
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQR-KRISAKEE- 205
HVVR+ + RG+D + V G A R KR S ++E
Sbjct: 135 HVVRR-----------------NTKTRGNDNDDAGQKVQNGDGENGGANRNKRQSRRDEN 177
Query: 206 -DDGE------LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 258
DDG+ E+ D S+ KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV
Sbjct: 178 GDDGDDSDENSNENADASSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEN 237
Query: 259 LTRENVASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSLGRFDI--Q 315
+TRENVASH LQK+RLYLKR++ S+Q + + N G++ D+
Sbjct: 238 ITRENVASH-----LQKYRLYLKRMSMDASRQANLVAALGG---RNPAYGNMNSLDVFRH 289
Query: 316 ALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPA 351
A G+ PP H++ + NLV ++ P+
Sbjct: 290 YNNAYGRYPP-VPTTTHSQ-----SNNLVARMNSPS 319
>gi|356554201|ref|XP_003545437.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 681
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 163/303 (53%), Positives = 209/303 (68%), Gaps = 17/303 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL +LE +LRRC Y+VTT A AL +LRE K FD+V+SDV
Sbjct: 14 DQFPIGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALKLLRENKTMFDLVISDV 73
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+S + VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 74 HMPDMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQ 133
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEG-TEGTFKAQRKRISAKEED 206
HV+R++ ++KE + +DH K +D S G ++ K +KR E+D
Sbjct: 134 HVIRRKKIDSKERN-----KTSDHDKPNADNGNGRVSAGTGNSDQNGKPSKKRKDQDEDD 188
Query: 207 DGEL----ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 262
+ E +++D ST KKPRVVWSVELH++FVSAVNQLGIDKAVPK+IL+LMNV LTRE
Sbjct: 189 EEENEDGHDNEDSSTLKKPRVVWSVELHRKFVSAVNQLGIDKAVPKKILDLMNVEKLTRE 248
Query: 263 NVASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSL-GRFDIQALAAS 320
NVASH LQK+RLYLKR++ V+ +Q + + + +++GSL G +Q L
Sbjct: 249 NVASH-----LQKYRLYLKRISCVANRQANLVAALGTADSSYLRMGSLSGVGHMQTLTGP 303
Query: 321 GQI 323
Q
Sbjct: 304 QQF 306
>gi|242064244|ref|XP_002453411.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
gi|241933242|gb|EES06387.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
Length = 631
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 164/314 (52%), Positives = 213/314 (67%), Gaps = 37/314 (11%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G+G+ DQFP G+RVL VDDD TCL++LE++L+ C Y+VTT QAA AL +
Sbjct: 15 GGGHGAK--------DQFPVGMRVLAVDDDPTCLKLLEKLLQHCQYHVTTTGQAATALKL 66
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDY 132
LRE+K FD+V+SDVHMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI HGACDY
Sbjct: 67 LREKKDQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDY 126
Query: 133 LIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGT 192
L+KP+R E+L+ IWQHVVR+R + K + N + D K+ ++ S+ EG G
Sbjct: 127 LLKPVRIEQLRTIWQHVVRRRSCDAKNNGN----DNDDSGKK----LQVVSA--EGDNGG 176
Query: 193 FKAQRKRIS----------AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGI 242
+ KR S + D+ E+ D ST KKPRVVWSVELH++FV+AVNQLGI
Sbjct: 177 GN-RNKRTSRRGRDDNGDDGDDSDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGI 235
Query: 243 DKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNG-VSQQGGITNSFCA--P 299
DKAVPK+IL+LMNV +TRENVASH LQK+RLYLKRL+ S+Q +T +F P
Sbjct: 236 DKAVPKKILDLMNVENITRENVASH-----LQKYRLYLKRLSADASRQANLTAAFGGRNP 290
Query: 300 IETNVKLGSLGRFD 313
N+ L + +++
Sbjct: 291 AYVNMGLDAFRQYN 304
>gi|298103724|emb|CBM42563.1| putative B-type response regulator 21 [Populus x canadensis]
Length = 563
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 163/315 (51%), Positives = 207/315 (65%), Gaps = 31/315 (9%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRVLVVDDD T L+ILE+ML+RC Y VTTC A AL++LRERKG +D+V+SDV
Sbjct: 11 DSFPAGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDV 70
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
MPDMDGFKLLEH+GLEMDLPVIMMS DG S VM+G++HGACDYL+KPIR +EL+NIWQ
Sbjct: 71 FMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV RK+ +E ++ E +E + GSD+ E + G + T +RK I +K +
Sbjct: 131 HVFRKKIHEVRDIEILEGIESFQMTRNGSDQYEDGHFLC-GEDLTLIKKRKDIESKHD-- 187
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAV------------------PKR 249
E ++ D ++ KK RVVWSVELHQ+FV AVNQ+G D PK+
Sbjct: 188 -EKDNGDNTSAKKARVVWSVELHQKFVKAVNQIGFDTTSLSCFYRAMTSNVCLAEVGPKK 246
Query: 250 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRL---NGVSQQGGITNSFCAPIETNV-K 305
IL+LMNVP LTRENVASH LQK+RLYL RL N + G+ +P+ +V
Sbjct: 247 ILDLMNVPRLTRENVASH-----LQKYRLYLSRLQKGNDFNNPVGMIKQSDSPLSDSVGS 301
Query: 306 LGSLGRFDIQALAAS 320
GS ++Q + S
Sbjct: 302 FGSQNSINLQPIDVS 316
>gi|326500594|dbj|BAJ94963.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/261 (58%), Positives = 186/261 (71%), Gaps = 25/261 (9%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP G+RVL VDDD TCL++LE +LRRC Y+VTT QAA AL +LRE K FD+V+SDVHM
Sbjct: 18 FPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHM 77
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI HGACDYL+KP+R E+LK IWQHV
Sbjct: 78 PDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 137
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
+R + +N GS + K + E E G K Q +R + DDG+
Sbjct: 138 IR------RNTKNRGSDNDDASQKGPNAEGE------NGGANRNKRQSRRDRDENGDDGD 185
Query: 210 LESD-------DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 262
+SD D S+ KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV +TRE
Sbjct: 186 -DSDENSNDNGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRE 244
Query: 263 NVASHLQEINLQKFRLYLKRL 283
NVASH LQK+RLYLKR+
Sbjct: 245 NVASH-----LQKYRLYLKRM 260
>gi|357125033|ref|XP_003564200.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 654
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/266 (57%), Positives = 195/266 (73%), Gaps = 14/266 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +LRRC Y+VT +QA AL +LRE K FD+V+SDV
Sbjct: 20 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAITALKLLRENKDMFDLVISDV 79
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+S +G V++GI HGACDYL+KP+R EEL+N+WQ
Sbjct: 80 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNVWQ 139
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEG-TEGTFKAQRKR------I 200
HVVR++++ N+E N +E +D + V G ++ + +A +KR
Sbjct: 140 HVVRRKFS-NREPSNLDFCKEFS-KPPSADSYHGLNQVTCGSSDQSSRACKKRKELHSEE 197
Query: 201 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 260
+ ED+ E+D+PS +K+PRVVWSVELH++FV+AVN LGIDKAVPKRILELMNV LT
Sbjct: 198 EDEGEDNDAQENDEPSASKRPRVVWSVELHRKFVAAVNHLGIDKAVPKRILELMNVEKLT 257
Query: 261 RENVASHLQEINLQKFRLYLKRLNGV 286
RENVASH LQK+RLYL+RL+ V
Sbjct: 258 RENVASH-----LQKYRLYLRRLSAV 278
>gi|147787458|emb|CAN60088.1| hypothetical protein VITISV_005486 [Vitis vinifera]
Length = 706
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 229/360 (63%), Gaps = 31/360 (8%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYN----------------VTTCS 64
A + V D FP G+RVL VDDD TCL +L+ +LRRC Y VTT +
Sbjct: 11 AGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQGLVLLCFARLLLYMNFVTTTN 70
Query: 65 QAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRG 124
QA AL +LRE K FD+V+SDV MPDMDGFKLLE +GLEMDLPVIM+S+ VMRG
Sbjct: 71 QAITALKMLRENKNNFDLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSSHSDQKLVMRG 130
Query: 125 IRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASS 184
I HGACDYL+KP+R EELKNIWQHV+R++ ++K+ +N + ++ H G SS
Sbjct: 131 ITHGACDYLLKPVRIEELKNIWQHVIRRKKIDSKD-QNKSADQDNALHADGEGGEGPPSS 189
Query: 185 VNEGTEGTFKAQRK---RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG 241
N G +RK +E ++ E++DPS+ KKPRVVWSVELH++FV+AVNQLG
Sbjct: 190 SNADQNGKLNRKRKDQNEDEEEEGEENGEENEDPSSQKKPRVVWSVELHRKFVAAVNQLG 249
Query: 242 IDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPI 300
I+KAVPKRIL+LMNV GLTRENVASH LQK+RLYLKR++ V +QQ +F A
Sbjct: 250 IEKAVPKRILDLMNVEGLTRENVASH-----LQKYRLYLKRISCVATQQANXVAAFGAKD 304
Query: 301 ETNVKLGSLGRF-DIQALAASGQIPPQTLAALHAE-LLGR---PTGNLVTAVDQPALLQA 355
+ +++GSL F D + LA G++ +++ +LGR P G + + L+Q
Sbjct: 305 SSYMRMGSLDGFGDFRGLAGPGRLNSTAMSSYPPSGMLGRLNSPAGLSLRGLTSSGLIQT 364
>gi|449450407|ref|XP_004142954.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
gi|449494494|ref|XP_004159561.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
Length = 583
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/270 (57%), Positives = 191/270 (70%), Gaps = 16/270 (5%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
+G+ S R+ D FP GLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +L
Sbjct: 3 NGFSSPRS------DVFPIGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLL 56
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYL 133
RERK +D+V+SDV+MPDMDGFKLLEH+GLEMDLPVIMMS DG S VM+G++HGACDYL
Sbjct: 57 RERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYL 116
Query: 134 IKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTF 193
+KPIR +EL+NIWQHV+RK+ E ++ E +E + +D + S G E
Sbjct: 117 LKPIRMKELRNIWQHVLRKKIQEGRDIEGHDVIEGIHILRNVADRYD-DSQFLRGEEPFS 175
Query: 194 KAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILEL 253
+RK I E+ D D S+TKK RVVWSVELHQ+FV AVNQ+G DK PK+IL+L
Sbjct: 176 VRKRKDIDKHEDKD----FCDTSSTKKARVVWSVELHQKFVKAVNQIGFDKVGPKKILDL 231
Query: 254 MNVPGLTRENVASHLQEINLQKFRLYLKRL 283
MNVP LTRENVASH LQK+RLYL RL
Sbjct: 232 MNVPWLTRENVASH-----LQKYRLYLSRL 256
>gi|297733626|emb|CBI14873.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/270 (56%), Positives = 186/270 (68%), Gaps = 44/270 (16%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
SG+ S R + FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL++L
Sbjct: 3 SGFCSPRT------EAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNML 56
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYL 133
RERK FD+V+SDV+MPDMDGFKLLEH+GLEMDLPVIMMS DG S VM+G++HGACDYL
Sbjct: 57 RERKDGFDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYL 116
Query: 134 IKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTF 193
+KP+R +ELKNIWQHV RK+ ++EG +
Sbjct: 117 LKPVRMKELKNIWQHVFRKK-------------------------------IHEGKDLGA 145
Query: 194 KAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILEL 253
+RK + + DD EL DPS++KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+L
Sbjct: 146 TRKRKDMENRRHDDQELV--DPSSSKKARVVWSIDLHQKFVDAVNQIGFDKVGPKKILDL 203
Query: 254 MNVPGLTRENVASHLQEINLQKFRLYLKRL 283
MNVP LTRENVASH LQK+RLYL RL
Sbjct: 204 MNVPWLTRENVASH-----LQKYRLYLSRL 228
>gi|255565035|ref|XP_002523510.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223537217|gb|EEF38849.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 676
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 195/487 (40%), Positives = 278/487 (57%), Gaps = 69/487 (14%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD CL++L+ +L++C Y VTT +QA AL +LRE + +D+V+SDV
Sbjct: 12 DKFPVGMRVLAVDDDPICLKVLDTLLKKCQYQVTTTNQAIQALKMLRENRNKYDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+MPDMDGFKLLE +GLEMDLPVIM+SA V +G+ HGA DYL+KP+R EELKNIWQ
Sbjct: 72 NMPDMDGFKLLELVGLEMDLPVIMLSAHSDKELVYKGVTHGAVDYLLKPVRIEELKNIWQ 131
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R++ + K+ S + D G+ E S + + K RKR E+++
Sbjct: 132 HVIRRKKLQPKDQSRS---QNQDKPLDGAGEGGQGMSSSGSEDQNGKVNRKRKDQDEDEE 188
Query: 208 GEL-----ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 262
E ++D+P KKPRVVWSVELH++FV+AVNQLG+DKAVPK+IL+LMNV GLTRE
Sbjct: 189 EEGEDNLNDTDEPGAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEGLTRE 248
Query: 263 NVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSLGRF-DIQALAAS 320
NVASH LQK+RLYLKR++ SQQ + +F + +++ SL F + + L+
Sbjct: 249 NVASH-----LQKYRLYLKRISSTASQQANMVAAFGIKDSSYLRMASLDGFGEFRTLSGP 303
Query: 321 GQIPPQTLAALHAE-LLGR---PTGNLVTAVDQPALLQ--------------ATLQGPKC 362
G++ ++++ H +LGR P+G + + LLQ LQ P
Sbjct: 304 GRLSSTSISSYHPSGMLGRLNSPSGLTLRGIASSGLLQPGQSQSLSSSVNTLGKLQ-PTL 362
Query: 363 IPADHGVAFGQQLVKCQSNVPENLPQSIISV-------DDASTGFGVWASNS-----LGA 410
+ + GV Q + S++ N QS S +D S+GF + S S +G+
Sbjct: 363 LHSSQGVNLFQGI---PSSLEPNQLQSKSSAHFGEFNRNDDSSGFSLTNSFSDARVTIGS 419
Query: 411 VASTSNLGGLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRS 470
+++T+ NP M++ Q QQNQ + + S L VPS +
Sbjct: 420 LSNTATGPSSNP----MML-----QAHPQQNQNT-----------GVFATQSSLSVPSLN 459
Query: 471 SASFQAG 477
SF G
Sbjct: 460 QESFDVG 466
>gi|224088246|ref|XP_002308388.1| predicted protein [Populus trichocarpa]
gi|222854364|gb|EEE91911.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/365 (44%), Positives = 232/365 (63%), Gaps = 25/365 (6%)
Query: 20 RAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC 79
R + +FP G+R+L VDDD CL++LE +LR+C Y VTT +QA AL++LRE +
Sbjct: 7 RGGNSVNEKKFPVGMRILAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNK 66
Query: 80 FDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIRE 139
+D+V+SDV+MPDMDGFKLLE +GLEMDLPVIM+S+ G V +G+ HGA DYL+KP+R
Sbjct: 67 YDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVYKGVTHGAVDYLLKPVRM 126
Query: 140 EELKNIWQHVV-RKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRK 198
EELKNIWQHV+ RK+W ++ + + D G + S ++ + K + +
Sbjct: 127 EELKNIWQHVIRRKKWYPEDQNRSPNQDKGDDGAGEGEQGVTSTGSADQNGKLNRKRKDQ 186
Query: 199 RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 258
+EE + +++ KKPRVVWSV+LHQ+FV+AVNQ+G+DKAVPK+IL+LMNV G
Sbjct: 187 DDEDEEEGEDGDDNEVSGNQKKPRVVWSVDLHQKFVAAVNQMGLDKAVPKKILDLMNVDG 246
Query: 259 LTRENVASHLQEINLQKFRLYLKRL-NGVSQQGGITNSFCAPIETNVKLGSLGRF-DIQA 316
LTRENVASH LQKFRLYLKRL +G +QQG + ++F A + +++ S+ F D ++
Sbjct: 247 LTRENVASH-----LQKFRLYLKRLSSGGNQQGNMVSAFGAKDSSYLQMSSVDGFGDFRS 301
Query: 317 LAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQATLQG--------PKCIPADHG 368
+ G++ +L++ P+G + ++ P L TLQG P +P + G
Sbjct: 302 MHGPGRLSTTSLSSY-------PSGTFLGRLNSPGGL--TLQGIASSGLHQPGLLPTNQG 352
Query: 369 VAFGQ 373
Q
Sbjct: 353 TNLFQ 357
>gi|298103728|emb|CBM42565.1| putative B-type response regulator 14 [Populus x canadensis]
Length = 594
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 175/384 (45%), Positives = 229/384 (59%), Gaps = 39/384 (10%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL++LRERKG +D+V+SDV
Sbjct: 12 DSFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKGGYDIVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+MPDMDGFKLLE +GLEMDLPVIMMS DG S VM+G++HGACDYL+KPIR +EL+NIWQ
Sbjct: 72 YMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV RK+ +E ++ E +E + GSD+ E V G + T +RK +K +
Sbjct: 132 HVFRKKIHEVRDIETLERVESFQMTRNGSDQYE-DGHVLCGEDLTSIKKRKHFESKHD-- 188
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAV------------------PKR 249
E ++ D +TKK RVVWSV+LHQ+FV AVNQ+G D PK+
Sbjct: 189 -EKDTGDSISTKKARVVWSVDLHQKFVKAVNQIGFDTTSLPSFDGAMTGSVCLAEVGPKK 247
Query: 250 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRL---NGVSQQGGITNSFCAPIETNVK- 305
IL++MNVP LTRENVASH LQK+RLYL RL N G T +P+ + +
Sbjct: 248 ILDMMNVPWLTRENVASH-----LQKYRLYLSRLQKENDFKNPAGGTKQSDSPLRDSARS 302
Query: 306 LGSLGRFDIQALAASG---QIPPQTLAALHAELLGRPTGN---LVTAVDQPA-LLQATLQ 358
GS ++Q S + +L + + + + T V++P L +
Sbjct: 303 FGSQNSINLQPNDVSNGSYRFSGSSLVVHNGDPRSHDSDRKRLVSTPVEEPKRTLTVNVP 362
Query: 359 GPKCIPADHGVAFGQQLVKCQSNV 382
P CIP + FG L QS V
Sbjct: 363 NP-CIPRSSQMEFGHPLAPPQSEV 385
>gi|356556600|ref|XP_003546612.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 697
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 160/314 (50%), Positives = 210/314 (66%), Gaps = 35/314 (11%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD CL++LE +LR+C Y+VTT +QA AL +LRE + FD+V+SDV
Sbjct: 13 DRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALKMLRENRNKFDLVISDV 72
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+MPD+DGFKLLE +GLEMDLPVIM+SA G VM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 73 NMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQ 132
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKA----QRKRISAK 203
HVVR++ N + +N S EE + G EG++G Q KR+ K
Sbjct: 133 HVVRRK-NFDSRDQNKASNEEKAPNIAG-----------EGSQGLRSENSADQNKRLGKK 180
Query: 204 EEDDG---------ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELM 254
+D + +DPS KKPRVVWSVELH++FV+AVNQLG+DKAVPK+IL+LM
Sbjct: 181 RKDQSEEEEEDGEENGDDEDPSAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLM 240
Query: 255 NVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSL-GRFD 313
NV GLTRENVASH LQK+RLYLK+ +QQ + + ++ +++GS+ G D
Sbjct: 241 NVEGLTRENVASH-----LQKYRLYLKK---AAQQANMVAALGGS-DSYLRMGSIDGYGD 291
Query: 314 IQALAASGQIPPQT 327
+ SG+I T
Sbjct: 292 FCTSSGSGRITNTT 305
>gi|297825553|ref|XP_002880659.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
gi|297326498|gb|EFH56918.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
Length = 611
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/331 (50%), Positives = 223/331 (67%), Gaps = 22/331 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL+ILE +LR C Y+VTT ++A AL++LRE K FD+V+SDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILETLLRHCQYHVTTTNEAQKALELLRENKNKFDLVISDV 70
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
MPDMDGFKLLE +GLEMDLPVIM+SA VM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKFVMKGVTHGACDYLLKPVRIEELKNIWQ 130
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HVVR R+++N+ N + + G++ + Y+ N G +RK +++D+
Sbjct: 131 HVVRSRFDKNRGSNNGDKRDGS-----GNEGVGYSDQNN----GRANRKRKDQYNEDDDE 181
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
+ ++DD S KK RVVW+VELH++FV+AVNQLG +KA+PK+IL+LMNV LTRENVASH
Sbjct: 182 EKDDNDDSSAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASH 241
Query: 268 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQAL-AASGQI-- 323
LQKFRLYLKR++GV+ QQ + NS ++ + L L F+ + + SGQ
Sbjct: 242 -----LQKFRLYLKRISGVANQQAIMANSDLHFLQMSSSLNGLDGFNHRPIPVGSGQFHG 296
Query: 324 -PPQTLAALHAELLGR---PTGNLVTAVDQP 350
P + E+LGR P+G V + P
Sbjct: 297 GAPAMRSFTPNEILGRLNTPSGIGVRNLSSP 327
>gi|168015656|ref|XP_001760366.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688380|gb|EDQ74757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 157/277 (56%), Positives = 195/277 (70%), Gaps = 23/277 (8%)
Query: 24 VAVPDQF-PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
+A P+ F PAGL+VLVVDDD L+ILE+MLR C Y VTTC+ A AL +LRE + FD+
Sbjct: 4 LAHPEGFSPAGLKVLVVDDDNVILKILERMLRECKYAVTTCNSATKALAMLRENRSYFDL 63
Query: 83 VLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
V+SDV+MPDMDGFKLLE IGLE+DLPVIMMS DG + +VMRGI+HGACDYL+KP+R EEL
Sbjct: 64 VISDVYMPDMDGFKLLEAIGLELDLPVIMMSRDGEIDSVMRGIKHGACDYLLKPVRLEEL 123
Query: 143 KNIWQHVVRKRWNEN-KEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRIS 201
+NIWQHVVRK + E SG L+E H+ +D F A ++
Sbjct: 124 RNIWQHVVRKLVSPILVSKEESGELDEYPKHQDNAD---------------FDATSRKRK 168
Query: 202 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 261
+ ED+ +L +D + KK R+VWS ELHQQFV+AVN LG+DKAVP++IL++MNV GLTR
Sbjct: 169 ERLEDETQL-VEDVNNLKKARIVWSPELHQQFVNAVNYLGVDKAVPRKILDIMNVQGLTR 227
Query: 262 ENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 298
ENVASH LQK+R YLKRL GV+ Q SF A
Sbjct: 228 ENVASH-----LQKYRSYLKRLIGVTPQPHPVASFQA 259
>gi|2244969|emb|CAB10390.1| hypothetical protein [Arabidopsis thaliana]
gi|3549643|emb|CAA06433.1| receiver-like protein 5 [Arabidopsis thaliana]
gi|7268360|emb|CAB78653.1| hypothetical protein [Arabidopsis thaliana]
Length = 644
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 177/354 (50%), Positives = 224/354 (63%), Gaps = 40/354 (11%)
Query: 7 IVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQA 66
+V G G S AA + D FPA LRVLVVDDD TCL ILE+ML CLY Q
Sbjct: 1 MVNPGHGRGPDSGTAAGGSNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYR----EQR 56
Query: 67 AVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI----------MMSADG 116
A L R + G FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVI +MSAD
Sbjct: 57 AHCLCFGRTKNG-FDIVISDVHMPDMDGFKLLEHVGLEMDLPVINLNVLKPLVIVMSADD 115
Query: 117 RVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNE-NKEHENSGSLEET------ 169
S V++G+ HGA DYLIKP+R E LKNIWQHVVRK+ NE N + GS+E+T
Sbjct: 116 SKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDR 175
Query: 170 -DHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVE 228
H+ +D +SSVNEG ++ RKR + +D G+ + +D S+ KKPRVVWSVE
Sbjct: 176 QQQHREDAD--NNSSSVNEGNG---RSSRKRKEEEVDDQGD-DKEDSSSLKKPRVVWSVE 229
Query: 229 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 288
LHQQFV+AVNQLG+D + +L + V + N+ + QK+R+YL+RL GVSQ
Sbjct: 230 LHQQFVAAVNQLGVDSELKTCLLMHLCV---SIGNI------VEFQKYRIYLRRLGGVSQ 280
Query: 289 -QGGITNSFCAPIETNV-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 340
QG + +SF + + L SL FD+Q+LA +GQ+PPQ+LA L A LGRPT
Sbjct: 281 HQGNMNHSFMTGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPT 334
>gi|255084361|ref|XP_002508755.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
gi|226524032|gb|ACO70013.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
Length = 488
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/343 (49%), Positives = 208/343 (60%), Gaps = 42/343 (12%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
AV FP GLRVLVVDDD CL+I+E+ML+RC Y VTT S+ A AL LRERK FD+VL
Sbjct: 5 AVSKGFPIGLRVLVVDDDPLCLKIVEKMLKRCQYEVTTFSRGAEALKTLRERKDDFDIVL 64
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
SDVHMPDMDGFKLLEHI LE+D+PV+MMSA+ V+RGI HGA DYL+KP+R EEL+N
Sbjct: 65 SDVHMPDMDGFKLLEHIALELDIPVMMMSANCATDVVLRGIIHGAVDYLLKPVRIEELRN 124
Query: 145 IWQHVVRKRWNENKEHENSG---------------------SLEETDHHKRGSDEIEYAS 183
IWQHVVR++ ++ + SG S ++ H D+ A
Sbjct: 125 IWQHVVRRKRESSQGNLRSGEGGSNGRTVSGGSTGEGGGKDSKGSSEQHGDAKDKTGSAG 184
Query: 184 SVNEGTEGTFKAQRKRISAKEE---DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 240
++ + +K +E G E++D S KKPRVVWS ELHQQFV+AVNQL
Sbjct: 185 GSGGSSKRKKGSGKKGDEGTDEVKDGSGGDENEDSSALKKPRVVWSAELHQQFVTAVNQL 244
Query: 241 GIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVS--QQGGITNSFCA 298
GIDKAVPKRIL+LM V GLTRENVASH LQK+RLYLKRL GV+ G F +
Sbjct: 245 GIDKAVPKRILDLMGVQGLTRENVASH-----LQKYRLYLKRLQGVNSGGAPGGGPGFMS 299
Query: 299 PIETN---VKLGSLGRFDIQALAAS--------GQIPPQTLAA 330
PI + V+ G GR A+ G I P LA
Sbjct: 300 PIALDGSMVQGGPGGRVGSPAIGGPNGPIMVGHGHIDPAMLAG 342
>gi|225437477|ref|XP_002269371.1| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 519
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/306 (50%), Positives = 200/306 (65%), Gaps = 29/306 (9%)
Query: 19 SRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
S + AVP QFP G+RVL VDDD TCL+I+ +ML RC+Y VT C A AL +LRE
Sbjct: 9 SMSVTAAVPLQFPEGIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSS 68
Query: 79 CFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIR 138
FD+VLSD+HMPD+ G KLLE IGLEMD+PV+MMS+D + +M+GI HGACDY +KP+R
Sbjct: 69 RFDIVLSDLHMPDISGLKLLEIIGLEMDMPVVMMSSDEKRETIMKGIIHGACDYWVKPVR 128
Query: 139 EEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRK 198
+ ++ +WQHV+RKR N KE E++ D++E + EG+ +RK
Sbjct: 129 MDAIQLVWQHVIRKRRNGLKEMEHA-----------MEDDVEGGNE-----EGSRSMKRK 172
Query: 199 RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 258
+ ED+GE + P+T KKPR+VW+ LHQQFV+AVNQLG KAVPK+ILE MN+PG
Sbjct: 173 K---DREDEGESRNAMPTTVKKPRMVWTPALHQQFVAAVNQLGYSKAVPKKILEQMNLPG 229
Query: 259 LTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIE---TNVKLGSLGRFDIQ 315
LTRENVASH LQKFRLYL R++ +SQ G ++ P N +L +G +Q
Sbjct: 230 LTRENVASH-----LQKFRLYLSRVSEISQ--GPEKTYMNPASLNGCNPQLNVVGEVPLQ 282
Query: 316 ALAASG 321
L G
Sbjct: 283 GLTREG 288
>gi|356530639|ref|XP_003533888.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 676
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 210/312 (67%), Gaps = 29/312 (9%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD CL++LE +LR+C Y+VTT +QA AL +LRE + FD+V+SDV
Sbjct: 13 DRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLVISDV 72
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+MPD+DGFKLLE +GLEMDLPVIM+SA G VM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 73 NMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQ 132
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKA-QRKRISAKEED 206
HVVR++ N + +N S EE + +A ++G A Q KR+ K +D
Sbjct: 133 HVVRRK-NFDSRDQNKASNEEKAPN--------FAGGGSQGLRSENSADQNKRLGKKRKD 183
Query: 207 DG---------ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 257
+ +DPS KK RVVWSVELH++FV+AVNQLG+DKAVPK+IL+LMNV
Sbjct: 184 QSDEEEEGGEENEDDEDPSAQKKARVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVE 243
Query: 258 GLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSL-GRFDIQA 316
GLTRENVASH LQK+RLYLK+ +QQ + + ++ +++GS+ G D
Sbjct: 244 GLTRENVASH-----LQKYRLYLKK---AAQQANMVAALGGS-DSYLRIGSIDGYGDFCT 294
Query: 317 LAASGQIPPQTL 328
+ SG+I TL
Sbjct: 295 SSGSGRITNATL 306
>gi|145340805|ref|XP_001415508.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575731|gb|ABO93800.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 270
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 157/274 (57%), Positives = 193/274 (70%), Gaps = 22/274 (8%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGL VLVVDDD+ CL+++E+ML+ C Y VT CS A AL+ILR RK FD+VLSDVHM
Sbjct: 1 FPAGLGVLVVDDDLLCLKVVEKMLKACKYKVTACSTAKTALEILRTRKEEFDIVLSDVHM 60
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLE I E+ LPV+MMSA+ S V+RGI HGA DYL+KP+R EEL+NIWQHV
Sbjct: 61 PDMDGFKLLEIIQFELALPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQHV 120
Query: 150 VRKRWNENKEHENSGS--LEETDHHKRG--------SDEIEY-ASSVNEG-TEGTFKAQR 197
VR+ ++ K +SGS +E + KR S+E++ AS ++ G ++
Sbjct: 121 VRRDYSSAK---SSGSEDVEASSPSKRAKTSGSNSKSEEVDRTASEMSSGKARKKPTGKK 177
Query: 198 KRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 257
S KE + ++ D S +KKPRVVWS ELH QFV+AVNQLGIDKAVPKRIL+LM V
Sbjct: 178 GGKSVKEAEKKDVV--DNSNSKKPRVVWSAELHAQFVTAVNQLGIDKAVPKRILDLMGVQ 235
Query: 258 GLTRENVASHLQEINLQKFRLYLKRLNGVSQQGG 291
GLTRENVASH LQK+RLYLKRL G +GG
Sbjct: 236 GLTRENVASH-----LQKYRLYLKRLQGNDARGG 264
>gi|25365080|pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
Length = 573
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/267 (58%), Positives = 190/267 (71%), Gaps = 17/267 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL+ILE +LR C Y+VTT +QA AL++LRE K FD+V+SDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDV 70
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
MPDMDGFKLLE +GLEMDLPVIM+SA VM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQ 130
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HVVR R+++N+ N+G D +E S N G K RKR ED+
Sbjct: 131 HVVRSRFDKNRGSNNNG-----DKRDGSGNEGVGNSDPNNG-----KGNRKRKDQYNEDE 180
Query: 208 GELESDDPSTT--KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
E D+ + KK RVVW+VELH++FV+AVNQLG +KA+PK+IL+LMNV LTRENVA
Sbjct: 181 DEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVA 240
Query: 266 SHLQEINLQKFRLYLKRLNGVSQQGGI 292
SH LQKFRLYLKR++GV+ Q I
Sbjct: 241 SH-----LQKFRLYLKRISGVANQQAI 262
>gi|240254528|ref|NP_180090.6| response regulator 12 [Arabidopsis thaliana]
gi|378405150|sp|P62598.2|ARR12_ARATH RecName: Full=Two-component response regulator ARR12
gi|330252573|gb|AEC07667.1| response regulator 12 [Arabidopsis thaliana]
Length = 596
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/265 (57%), Positives = 192/265 (72%), Gaps = 13/265 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL+ILE +LR C Y+VTT +QA AL++LRE K FD+V+SDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDV 70
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
MPDMDGFKLLE +GLEMDLPVIM+SA VM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQ 130
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HVVR R+++N+ N+G + GS +S +G K RK ++ED+
Sbjct: 131 HVVRSRFDKNRGSNNNGDKRD------GSGNEGVGNSDQNNGKGNRK--RKDQYNEDEDE 182
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
++DD KK RVVW+VELH++FV+AVNQLG +KA+PK+IL+LMNV LTRENVASH
Sbjct: 183 DRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASH 242
Query: 268 LQEINLQKFRLYLKRLNGVSQQGGI 292
LQKFRLYLKR++GV+ Q I
Sbjct: 243 -----LQKFRLYLKRISGVANQQAI 262
>gi|302799824|ref|XP_002981670.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
gi|300150502|gb|EFJ17152.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
Length = 413
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/273 (57%), Positives = 190/273 (69%), Gaps = 12/273 (4%)
Query: 28 DQF-PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
D F P GL+VLVVDDD CL +LE+MLR C Y VTTCS+A AL ILRERK FDVV+SD
Sbjct: 2 DHFSPTGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISD 61
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
VHMPDMDGFKLLE IGLEM +PVIMMSA G AVM+G+ +GACDYL+KP+R EEL+NIW
Sbjct: 62 VHMPDMDGFKLLELIGLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIW 121
Query: 147 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 206
QHVVR+R ++ + + EE + R + SS + ++KR S
Sbjct: 122 QHVVRRRTKDSAVRDEAP--EEWEDFMRSTPT---DSSEEADVDLRLLRKKKRPSCDFGG 176
Query: 207 DGELES-DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
G ES ++ KK RVVWS +LHQQFV A+N +GI+KAVPKRILE+MN+ GLTRENVA
Sbjct: 177 GGGDESMRSIASNKKARVVWSFDLHQQFVKAINHIGIEKAVPKRILEVMNIQGLTRENVA 236
Query: 266 SHLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 298
SH LQK+RLYLKRL+GV+ + SF A
Sbjct: 237 SH-----LQKYRLYLKRLSGVTPEPFPIASFQA 264
>gi|302768857|ref|XP_002967848.1| type B response regulator [Selaginella moellendorffii]
gi|300164586|gb|EFJ31195.1| type B response regulator [Selaginella moellendorffii]
Length = 414
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/273 (57%), Positives = 190/273 (69%), Gaps = 12/273 (4%)
Query: 28 DQF-PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
D F P GL+VLVVDDD CL +LE+MLR C Y VTTCS+A AL ILRERK FDVV+SD
Sbjct: 2 DHFSPTGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISD 61
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
VHMPDMDGFKLLE IGLEM +PVIMMSA G AVM+G+ +GACDYL+KP+R EEL+NIW
Sbjct: 62 VHMPDMDGFKLLELIGLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIW 121
Query: 147 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 206
QHVVR+R ++ + + EE + R + SS + ++KR S
Sbjct: 122 QHVVRRRTKDSAVRDEAP--EEWEDFMRSTPT---DSSEEADVDLRLLRKKKRPSCDFGG 176
Query: 207 DGELES-DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
G ES ++ KK RVVWS +LHQQFV A+N +GI+KAVPKRILE+MN+ GLTRENVA
Sbjct: 177 GGGDESVRSIASNKKARVVWSFDLHQQFVKAINHIGIEKAVPKRILEVMNIQGLTRENVA 236
Query: 266 SHLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 298
SH LQK+RLYLKRL+GV+ + SF A
Sbjct: 237 SH-----LQKYRLYLKRLSGVTPEPFPIASFQA 264
>gi|297743941|emb|CBI36911.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 154/328 (46%), Positives = 203/328 (61%), Gaps = 46/328 (14%)
Query: 19 SRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
S + AVP QFP G+RVL VDDD TCL+I+ +ML RC+Y VT C A AL +LRE
Sbjct: 9 SMSVTAAVPLQFPEGIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSS 68
Query: 79 CFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIR 138
FD+VLSD+HMPD+ G KLLE IGLEMD+PV+MMS+D + +M+GI HGACDY +KP+R
Sbjct: 69 RFDIVLSDLHMPDISGLKLLEIIGLEMDMPVVMMSSDEKRETIMKGIIHGACDYWVKPVR 128
Query: 139 EEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRK 198
+ ++ +WQHV+RKR N KE E++ D++E + EG+ +RK
Sbjct: 129 MDAIQLVWQHVIRKRRNGLKEMEHA-----------MEDDVEGGNE-----EGSRSMKRK 172
Query: 199 RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 258
+ ED+GE + P+T KKPR+VW+ LHQQFV+AVNQLG KAVPK+ILE MN+PG
Sbjct: 173 K---DREDEGESRNAMPTTVKKPRMVWTPALHQQFVAAVNQLGYSKAVPKKILEQMNLPG 229
Query: 259 LTRENVASHLQEIN----------------------LQKFRLYLKRLNGVSQQGGITNSF 296
LTRENVASHLQ + +QKFRLYL R++ +SQ G ++
Sbjct: 230 LTRENVASHLQVMEKIFSRKIYCYCLVKDTDNYSYMVQKFRLYLSRVSEISQ--GPEKTY 287
Query: 297 CAPIE---TNVKLGSLGRFDIQALAASG 321
P N +L +G +Q L G
Sbjct: 288 MNPASLNGCNPQLNVVGEVPLQGLTREG 315
>gi|296082079|emb|CBI21084.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 168/320 (52%), Positives = 219/320 (68%), Gaps = 13/320 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCLR+L+ +LRRC Y+VTT SQA AL +LRE K FD+V+SDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA+ VM+GI HGACDYL+KP+R E+LKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQ 131
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R+R + ++ NS S ++ G + + G + + +E D+
Sbjct: 132 HVIRRRRFDPRDQNNSDSRDKRQGPGEGGQGSSEPGNPDHGKLNKKRKDQNEDDDEENDE 191
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
+++DPS+ KKPRVVWSVELH++FV+AVNQLGID+AVPK+IL+LMNV LTRENVASH
Sbjct: 192 NGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEKLTRENVASH 251
Query: 268 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVK-LGSLGRFDIQALAASGQIPP 325
LQK+RLYLKR++ V+ QQ + + + T + L LG F L+ SGQ+P
Sbjct: 252 -----LQKYRLYLKRISCVANQQANMVAALGSTDSTYLHSLNGLGNF--YNLSGSGQLPN 304
Query: 326 QTLAALHAE-LLGR---PTG 341
T + +LGR P+G
Sbjct: 305 STFRSFPPSGMLGRLNTPSG 324
>gi|225430376|ref|XP_002282928.1| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 693
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 168/320 (52%), Positives = 219/320 (68%), Gaps = 13/320 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCLR+L+ +LRRC Y+VTT SQA AL +LRE K FD+V+SDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA+ VM+GI HGACDYL+KP+R E+LKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQ 131
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R+R + ++ NS S ++ G + + G + + +E D+
Sbjct: 132 HVIRRRRFDPRDQNNSDSRDKRQGPGEGGQGSSEPGNPDHGKLNKKRKDQNEDDDEENDE 191
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
+++DPS+ KKPRVVWSVELH++FV+AVNQLGID+AVPK+IL+LMNV LTRENVASH
Sbjct: 192 NGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEKLTRENVASH 251
Query: 268 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVK-LGSLGRFDIQALAASGQIPP 325
LQK+RLYLKR++ V+ QQ + + + T + L LG F L+ SGQ+P
Sbjct: 252 -----LQKYRLYLKRISCVANQQANMVAALGSTDSTYLHSLNGLGNF--YNLSGSGQLPN 304
Query: 326 QTLAALHAE-LLGR---PTG 341
T + +LGR P+G
Sbjct: 305 STFRSFPPSGMLGRLNTPSG 324
>gi|147863919|emb|CAN81109.1| hypothetical protein VITISV_010435 [Vitis vinifera]
Length = 693
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 168/320 (52%), Positives = 219/320 (68%), Gaps = 13/320 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCLR+L+ +LRRC Y+VTT SQA AL +LRE K FD+V+SDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA+ VM+GI HGACDYL+KP+R E+LKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQ 131
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R+R + ++ NS S ++ G + + G + + +E D+
Sbjct: 132 HVIRRRRFDPRDQNNSDSRDKRQGPGEGGQGSSEPGNPDHGKLNKKRKDQNEDDDEENDE 191
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
+++DPS+ KKPRVVWSVELH++FV+AVNQLGID+AVPK+IL+LMNV LTRENVASH
Sbjct: 192 NGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEKLTRENVASH 251
Query: 268 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVK-LGSLGRFDIQALAASGQIPP 325
LQK+RLYLKR++ V+ QQ + + + T + L LG F L+ SGQ+P
Sbjct: 252 -----LQKYRLYLKRISCVANQQANMVAALGSTDSTYLHSLNGLGNF--YNLSGSGQLPN 304
Query: 326 QTLAALHAE-LLGR---PTG 341
T + +LGR P+G
Sbjct: 305 STFRSFPPSGMLGRLNTPSG 324
>gi|384254096|gb|EIE27570.1| CheY-like protein [Coccomyxa subellipsoidea C-169]
Length = 302
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/276 (55%), Positives = 188/276 (68%), Gaps = 25/276 (9%)
Query: 10 SSGGSGY---GSSRAADVAVPD---QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTC 63
SSG G+ G D+A D FPAGL+VLVVDDD CL+++E MLRRC Y VTTC
Sbjct: 24 SSGRRGFPHSGEMSGEDLARSDSWEMFPAGLKVLVVDDDPLCLKVVEHMLRRCNYQVTTC 83
Query: 64 SQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMR 123
AL+ LR+R FD+VLSDV+MPDMDGFKLLEHIGLE+DLPVIMMS++G + V+R
Sbjct: 84 PNGKAALEKLRDRSVHFDLVLSDVYMPDMDGFKLLEHIGLELDLPVIMMSSNGETNVVLR 143
Query: 124 GIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYAS 183
G+ HGA D+LIKP+R EEL+N+WQHVVR++ ++ ++ + + SDE
Sbjct: 144 GVTHGAVDFLIKPVRVEELRNVWQHVVRRKRDQ--------AVSQARDSRDISDE----- 190
Query: 184 SVNEGTEGTFKAQRKR---ISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 240
EGT+ +KR I D +SDD + KK RVVWSVE+HQQFV AVNQL
Sbjct: 191 ---EGTDDGKPRDKKRKEVILVLWWDMQRRDSDDGVSAKKARVVWSVEMHQQFVQAVNQL 247
Query: 241 GIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 276
GIDKAVPKRIL+LMNV GLTRENVASHLQ +L F
Sbjct: 248 GIDKAVPKRILDLMNVDGLTRENVASHLQVPHLSIF 283
>gi|168010903|ref|XP_001758143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690599|gb|EDQ76965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 147/260 (56%), Positives = 183/260 (70%), Gaps = 22/260 (8%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
PAGL+VLVVDD+ L I+E+ML+ C Y VTTC+ A AL +LRE + FD+V+SDV+MP
Sbjct: 1 PAGLKVLVVDDEPLALMIVERMLQICQYTVTTCNSATKALAMLRENRNYFDLVISDVYMP 60
Query: 91 DMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
DMDGFKLLE IGLE+DLPVIMMS DG +VM+GIRHGACDYL+KP+R +EL NIWQHVV
Sbjct: 61 DMDGFKLLEAIGLELDLPVIMMSGDGETDSVMKGIRHGACDYLLKPVRLKELINIWQHVV 120
Query: 151 RKRWN-ENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
RK + E SG +E H+ +D F + ++ + ED +
Sbjct: 121 RKLVTPRDIPKEESGEWDEFPKHQDNAD---------------FDSTARKRKERSEDVAQ 165
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
L +D + KK RVVWS ELHQQFV+AVN LG+DKAVP++IL++MNV GLTRENVASH
Sbjct: 166 L-VEDVNNLKKARVVWSAELHQQFVNAVNYLGVDKAVPRKILDIMNVQGLTRENVASH-- 222
Query: 270 EINLQKFRLYLKRLNGVSQQ 289
LQK+RLYLKRL GV+ Q
Sbjct: 223 ---LQKYRLYLKRLIGVTPQ 239
>gi|7576358|dbj|BAA94549.1| response regulator 11 [Arabidopsis thaliana]
Length = 457
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/291 (53%), Positives = 200/291 (68%), Gaps = 22/291 (7%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P GLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 91 DMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
DMDGFKLLEH+GLE+DLPVIMMS DG S VM+G++HGACDYL+KPIR +ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 151 RKRWNENKEHENSGSLEETDHHKRGSDEI---EYASSVNEGTEGTFKAQRKRISAKEEDD 207
RK+ E ++ E G ++ G+D I + A + G + +F +RK +++
Sbjct: 128 RKKLQEVRDIEGCG-------YEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLL 180
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID-KAVPKRILELMNVPGLTRENVAS 266
+ S++KK RVVWS ELH +FV+AVNQ+G D KA PK+IL+LMNVP LTRENVAS
Sbjct: 181 QDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVAS 240
Query: 267 HLQEINLQKFRLYLKRLNGVSQ----QGGITNSFCAP--IETNVKLGSLGR 311
H LQK+RLYL RL + GG+ N+ +P +E N S GR
Sbjct: 241 H-----LQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGYQSPGR 286
>gi|15220515|ref|NP_176938.1| two-component response regulator ARR11 [Arabidopsis thaliana]
gi|50400646|sp|Q9FXD6.1|ARR11_ARATH RecName: Full=Two-component response regulator ARR11; AltName:
Full=Receiver-like protein 3
gi|11072012|gb|AAG28891.1|AC008113_7 F12A21.15 [Arabidopsis thaliana]
gi|31711702|gb|AAP68207.1| At1g67710 [Arabidopsis thaliana]
gi|110736401|dbj|BAF00169.1| response regulator 11 [Arabidopsis thaliana]
gi|332196565|gb|AEE34686.1| two-component response regulator ARR11 [Arabidopsis thaliana]
Length = 521
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/291 (53%), Positives = 200/291 (68%), Gaps = 22/291 (7%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P GLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 91 DMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
DMDGFKLLEH+GLE+DLPVIMMS DG S VM+G++HGACDYL+KPIR +ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 151 RKRWNENKEHENSGSLEETDHHKRGSDEI---EYASSVNEGTEGTFKAQRKRISAKEEDD 207
RK+ E ++ E G ++ G+D I + A + G + +F +RK +++
Sbjct: 128 RKKLQEVRDIEGCG-------YEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLL 180
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID-KAVPKRILELMNVPGLTRENVAS 266
+ S++KK RVVWS ELH +FV+AVNQ+G D KA PK+IL+LMNVP LTRENVAS
Sbjct: 181 QDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVAS 240
Query: 267 HLQEINLQKFRLYLKRLNGVSQ----QGGITNSFCAP--IETNVKLGSLGR 311
H LQK+RLYL RL + GG+ N+ +P +E N S GR
Sbjct: 241 H-----LQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGYQSPGR 286
>gi|297841471|ref|XP_002888617.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
gi|297334458|gb|EFH64876.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
Length = 529
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/285 (53%), Positives = 196/285 (68%), Gaps = 20/285 (7%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P GLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 91 DMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
DMDGFKLLEH+GLE+DLPVIMMS DG S VM+G++HGACDYL+KPIR +ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 151 RKRWNENKEHENSGSLEETDHHKRGSDEI---EYASSVNEGTEGTFKAQRKRISAKEEDD 207
RK+ E ++ E G ++ G D I + A + G + +F +RK +++
Sbjct: 128 RKKLQEVRDIEGCG-------YEGGGDWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLL 180
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID-KAVPKRILELMNVPGLTRENVAS 266
+ S++KK RVVWS ELHQ+FV+AVNQ+G D KA PK+IL+LMNVP LTRENVAS
Sbjct: 181 QDESDPSSSSSKKARVVWSFELHQKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVAS 240
Query: 267 HLQEINLQKFRLYLKRLNGVSQ----QGGITNSFCAPIETNVKLG 307
H LQK+RLYL RL + GG+ N +P + V G
Sbjct: 241 H-----LQKYRLYLSRLEKGKELKCYSGGVKNMDSSPKDVEVNSG 280
>gi|298103726|emb|CBM42564.1| putative B-type response regulator 22 [Populus x canadensis]
Length = 668
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 193/458 (42%), Positives = 272/458 (59%), Gaps = 49/458 (10%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL +LE +LRRC YNVTT SQA AL +LRE K FD+V+SDV
Sbjct: 13 DQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLRENKNKFDLVISDV 72
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI HGAC YL+KP+R EELK IWQ
Sbjct: 73 HMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACYYLLKPVRIEELKTIWQ 132
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R++ ++NK+ +S + D +GS E +N+ + ++ED+
Sbjct: 133 HVIRRKKSDNKDRNSS---DNRDKPNQGSSEAVPDQKLNKKRKDQ-NGDDDEDHDEDEDE 188
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
E E++DP+T KKPRVVWS+ELH++FV+AVNQLG+DKAVPK+IL+LMNV LTRENVASH
Sbjct: 189 DEHENEDPTTQKKPRVVWSMELHRKFVAAVNQLGVDKAVPKKILDLMNVEKLTRENVASH 248
Query: 268 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQ 326
LQK+R YLKR++ V+ QQ + + + + +++ S+ + +LA S Q
Sbjct: 249 -----LQKYRHYLKRISTVANQQANMVAALGSSDASYLQMNSMSGLGLHSLAGSVQFHST 303
Query: 327 TLAALHAELLGRPTGNLVTAVDQPALLQAT-LQGPKCI-------------------PAD 366
+L P+ ++ ++ PA+L L P I P
Sbjct: 304 PFRSL-------PSSGMLDRLNSPAVLGIHGLPSPGVIQLGHVQTAPHMANGLSHFQPVG 356
Query: 367 H---------GVAFGQQLVKCQSNVPEN-LPQSIISVDDASTGFGVWASNSLGAVASTSN 416
H G+ +L + QSN N +P+ +DD ++ S ++ +A +SN
Sbjct: 357 HPGNNGNILQGMPMPLELDQIQSNKGVNYIPELPTHLDDTASFPVSSGSTNMKIIAGSSN 416
Query: 417 LGGLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETS 454
+ N +++++ Q Q Q+S +QS+LS S
Sbjct: 417 SPFVGVSNKHLMLE--GHDQGLQDGQKSGKQSSLSAGS 452
>gi|3549639|emb|CAA06431.1| receiver-like protein 3 [Arabidopsis thaliana]
Length = 444
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/291 (52%), Positives = 198/291 (68%), Gaps = 22/291 (7%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P GLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 91 DMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
DMDGFKLLEH+GLE+DLPVIMMS DG S VM+G+ GACDYL+KPIR +ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVHTGACDYLLKPIRMKELKIIWQHVL 127
Query: 151 RKRWNENKEHENSGSLEETDHHKRGSDEI---EYASSVNEGTEGTFKAQRKRISAKEEDD 207
RK+ E ++ E G ++ G+D I + A + G + +F +RK +++
Sbjct: 128 RKKLQEVRDIEGCG-------YEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLL 180
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID-KAVPKRILELMNVPGLTRENVAS 266
+ S++KK RVVWS ELH +FV+AVNQ+G D KA PK+IL+LMNVP LTRENVAS
Sbjct: 181 QDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVAS 240
Query: 267 HLQEINLQKFRLYLKRLNGVSQ----QGGITNSFCAP--IETNVKLGSLGR 311
H LQK+RLYL RL + GG+ N+ +P +E N S GR
Sbjct: 241 H-----LQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGYQSPGR 286
>gi|297798770|ref|XP_002867269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313105|gb|EFH43528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/270 (54%), Positives = 188/270 (69%), Gaps = 31/270 (11%)
Query: 23 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
++ V DQFP G+RVL VDDD TCLRIL+ +L RC Y+VTT +QA AL++LRE K FD+
Sbjct: 6 EIEVLDQFPVGMRVLAVDDDQTCLRILQTLLHRCQYHVTTTNQAQTALELLRENKNKFDL 65
Query: 83 VLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
V+SDV MPDMDGFKLLE +GLEMDLPVIM+SA VM+G++HGACDYL+KP+R EEL
Sbjct: 66 VISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEEL 125
Query: 143 KNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 202
KNIWQHVVRK S + SSV+ G + KA RKR
Sbjct: 126 KNIWQHVVRK-----------------------SKLKKNKSSVSNGAANSDKANRKRKEQ 162
Query: 203 KEEDDGEL---ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 259
EE++ E E+DDP+ KKPRV+W+ ELH +F++AV+ LG++KAVPK+IL+LMNV L
Sbjct: 163 YEEEEEEERGNENDDPTAQKKPRVLWTHELHNKFLAAVDHLGVEKAVPKKILDLMNVDKL 222
Query: 260 TRENVASHLQEINLQKFRLYLKRLNGVSQQ 289
TRENVASH LQKFR+ LK+++ + Q
Sbjct: 223 TRENVASH-----LQKFRVALKKMSDKANQ 247
>gi|312283507|dbj|BAJ34619.1| unnamed protein product [Thellungiella halophila]
Length = 539
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/267 (53%), Positives = 186/267 (69%), Gaps = 21/267 (7%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCLRILE +L RC Y+VTT QA AL +LRE K FD+V+SDV
Sbjct: 8 DQFPVGMRVLAVDDDQTCLRILETLLHRCQYHVTTTDQAQTALKLLRENKNKFDLVISDV 67
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
MPDMDGFKLLE +GLEMDLPVIM+SA VM+G++HGACDYL+KP+R EELKNIWQ
Sbjct: 68 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQ 127
Query: 148 HVVRK-RWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 206
HVVRK ++ + K ++G E +S G + K + + +E++
Sbjct: 128 HVVRKGKFKKMKSSLSNGESE--------------GNSDQNGVKANRKRKDQFEEEEEDE 173
Query: 207 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 266
+ +E+DDP+ KKPRV+W+ ELH + ++AV+ LG++KAVPK+IL+LMNV LTRENVAS
Sbjct: 174 ERGIENDDPTAQKKPRVLWTRELHNKSLAAVDHLGVEKAVPKKILDLMNVEKLTRENVAS 233
Query: 267 HLQEINLQKFRLYLKRL-NGVSQQGGI 292
H LQKFR LK++ N +QQ +
Sbjct: 234 H-----LQKFRSALKKITNETNQQANM 255
>gi|413951616|gb|AFW84265.1| putative two-component response regulator family protein [Zea mays]
Length = 598
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/282 (53%), Positives = 183/282 (64%), Gaps = 52/282 (18%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYN------------------VTTCSQAAVALD 71
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A+VAL
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEDAMSDRTVIARTGGISSCVTTCGLASVALQ 68
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI----------MMSADGRVSAV 121
ILRER+ FD+V+SDV+MPDMDGFKLLE IGLEMDLPVI +MS DG S V
Sbjct: 69 ILRERRNKFDIVISDVNMPDMDGFKLLELIGLEMDLPVISTKLLQSVSTVMSIDGETSRV 128
Query: 122 MRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEY 181
M+G+ HGACDYL+KP+R +EL+NIWQHV RK+ +E KE E+ G DE
Sbjct: 129 MKGVHHGACDYLLKPVRMKELRNIWQHVYRKKMHEVKEIED------------GLDERGL 176
Query: 182 ASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG 241
+ T RKR ++D + +S D +T KK RVVWSV+LHQ+FV+AVNQ+G
Sbjct: 177 FMRADTDT------MRKRKEV-DKDHADQDSSDGATAKKARVVWSVDLHQKFVNAVNQIG 229
Query: 242 IDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 283
DK PK+IL+LMNV GLTRENVASH LQK+RLYL RL
Sbjct: 230 FDKVGPKKILDLMNVHGLTRENVASH-----LQKYRLYLSRL 266
>gi|356528234|ref|XP_003532710.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR11-like [Glycine max]
Length = 581
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 145/265 (54%), Positives = 180/265 (67%), Gaps = 15/265 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLY-NVTTCSQAAVALDILRERKGCFDVVLSD 86
D FPAGLRVLVVDD + + L LY +VTTC A AL LRERK +D+V+SD
Sbjct: 13 DAFPAGLRVLVVDDXANIISLSNSFL---LYASVTTCCLATEALKKLRERKEAYDIVISD 69
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
V+MPDMDGFKLLE +GLEMDLPVIMMS DG S VM+G++HGACDYL+KPIR +EL+NIW
Sbjct: 70 VNMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 129
Query: 147 QHVVRKRWNENKEHENSGSLEETDHH--KRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 204
QHV RKR +E ++ E+ + H + GSD + + E T ++++ + +
Sbjct: 130 QHVFRKRMHEARDFESHEGFDFEGIHLMRNGSDHSDDGNLF--AVEETTSIKKRKDADNK 187
Query: 205 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 264
DD E P TKK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENV
Sbjct: 188 HDDKEFGDHFP--TKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENV 245
Query: 265 ASHLQEINLQKFRLYLKRLNGVSQQ 289
ASH LQK+RLYL RL + Q
Sbjct: 246 ASH-----LQKYRLYLSRLQKENDQ 265
>gi|15236580|ref|NP_194920.1| two-component response regulator ARR10 [Arabidopsis thaliana]
gi|38257358|sp|O49397.1|ARR10_ARATH RecName: Full=Two-component response regulator ARR10; AltName:
Full=Receiver-like protein 4
gi|2827643|emb|CAA16597.1| predicted protein [Arabidopsis thaliana]
gi|3549641|emb|CAA06432.1| receiver-like protein 4 [Arabidopsis thaliana]
gi|7270096|emb|CAB79910.1| predicted protein [Arabidopsis thaliana]
gi|27808620|gb|AAO24590.1| At4g31920 [Arabidopsis thaliana]
gi|110736270|dbj|BAF00105.1| predicted protein [Arabidopsis thaliana]
gi|332660579|gb|AEE85979.1| two-component response regulator ARR10 [Arabidopsis thaliana]
Length = 552
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 144/264 (54%), Positives = 186/264 (70%), Gaps = 31/264 (11%)
Query: 23 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
++ V DQFP G+RVL VDDD TCLRIL+ +L+RC Y+VTT +QA AL++LRE K FD+
Sbjct: 6 EIEVLDQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDL 65
Query: 83 VLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
V+SDV MPDMDGFKLLE +GLEMDLPVIM+SA VM+G++HGACDYL+KP+R EEL
Sbjct: 66 VISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEEL 125
Query: 143 KNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 202
KNIWQHVVRK S + S+V+ G+ KA RKR
Sbjct: 126 KNIWQHVVRK-----------------------SKLKKNKSNVSNGSGNCDKANRKRKEQ 162
Query: 203 KEEDDGEL---ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 259
EE++ E ++DDP+ KKPRV+W+ ELH +F++AV+ LG+++AVPK+IL+LMNV L
Sbjct: 163 YEEEEEEERGNDNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKL 222
Query: 260 TRENVASHLQEINLQKFRLYLKRL 283
TRENVASH LQKFR+ LK++
Sbjct: 223 TRENVASH-----LQKFRVALKKV 241
>gi|224102357|ref|XP_002312648.1| type-b response regulator [Populus trichocarpa]
gi|222852468|gb|EEE90015.1| type-b response regulator [Populus trichocarpa]
Length = 642
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 175/432 (40%), Positives = 230/432 (53%), Gaps = 87/432 (20%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL++LRERKG +D+V+SDV
Sbjct: 12 DSFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKGGYDIVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI------------------------------------- 110
+MPDMDGFKLLE +GLEMDLPVI
Sbjct: 72 YMPDMDGFKLLEQVGLEMDLPVISRFFSLTLEFYFNANIFYLRIHIPMSCLHYIYIGILI 131
Query: 111 -----------MMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKE 159
+MS DG S VM+G++HGACDYL+KPIR +EL+NIWQHV RK+ +E ++
Sbjct: 132 QLLTSCACQLTVMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRD 191
Query: 160 HENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTK 219
E +E + GSD+ E V G + T +RK I +K + E ++ D +TK
Sbjct: 192 IETLERVESFQMTRNGSDQYE-DGHVLCGEDLTSIKKRKHIESKHD---EKDTGDSISTK 247
Query: 220 KPRVVWSVELHQQFVSAVNQLGIDKAV------------------PKRILELMNVPGLTR 261
K RVVWSV+LHQ+FV AVNQ+G D PK+IL++MNVP LTR
Sbjct: 248 KARVVWSVDLHQKFVKAVNQIGFDTTSLPSFDGAMTGSVCLAEVGPKKILDMMNVPWLTR 307
Query: 262 ENVASHLQEINLQKFRLYLKRL----NGVSQQGGITNSFCAPIETNVKLGSLGRFDIQ-- 315
ENVASH LQK+RLYL RL + + GGI S ++ GS ++Q
Sbjct: 308 ENVASH-----LQKYRLYLSRLQKENDFKNPAGGIKQSDSPLRDSAGSFGSQNSINLQHN 362
Query: 316 -ALAASGQIPPQTLAALHAELLGRPTGN---LVTAVDQPA-LLQATLQGPKCIPADHGVA 370
S + +L + + + + T V++P L + P CIP +
Sbjct: 363 DVSNGSYRFSGSSLVVHNGDPRSHDSDRKRLVSTPVEEPKRTLTVNVPNP-CIPRSSQME 421
Query: 371 FGQQLVKCQSNV 382
FG L QS V
Sbjct: 422 FGHPLAPPQSEV 433
>gi|307107757|gb|EFN55999.1| hypothetical protein CHLNCDRAFT_30989, partial [Chlorella
variabilis]
Length = 334
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 142/264 (53%), Positives = 178/264 (67%), Gaps = 30/264 (11%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC---FDVVLSDV 87
P+GL+VLVVDDD CL+++ ML+RC Y V T + AL +LR+R+ FD+VLSDV
Sbjct: 31 PSGLKVLVVDDDPMCLKVVSAMLQRCNYEVDTRTSGQDALLLLRDRQEHNHQFDLVLSDV 90
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+MPDMDGFKLLEHIGLE+DLPVIMMS++G V+RG+ HGA D+LIKP+R EEL+N+WQ
Sbjct: 91 YMPDMDGFKLLEHIGLELDLPVIMMSSNGDTDVVLRGVTHGAVDFLIKPVRVEELRNVWQ 150
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HVVR+R + H R SDE + G + + KE +
Sbjct: 151 HVVRRR---------------SLHVGRASDE-------HSGLDLEQHQHHHGVKRKEVEA 188
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
+++ + KKPRVVWSVE+HQQFV AVNQLG+DKAVPKRIL+LMNV GLTRENVASH
Sbjct: 189 LQVQHETQGANKKPRVVWSVEMHQQFVDAVNQLGVDKAVPKRILDLMNVEGLTRENVASH 248
Query: 268 LQEINLQKFRLYLKRLNGVSQQGG 291
LQK+RLYLKR G+ G
Sbjct: 249 -----LQKYRLYLKRAQGLQSGKG 267
>gi|356546098|ref|XP_003541468.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 680
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/271 (52%), Positives = 186/271 (68%), Gaps = 17/271 (6%)
Query: 24 VAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVV 83
+ V D+FP G+RVL VDDD TCL +LE +LR+C YNVTT +QA AL++LR+ + FD+V
Sbjct: 1 MVVGDRFPVGMRVLAVDDDKTCLTVLENLLRKCQYNVTTTNQAIKALEMLRKNRNKFDLV 60
Query: 84 LSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK 143
+SDV+MPDMDGFKLLE +GLEMDLPVIM+S G VMRG+ GACDYL KP+R EEL+
Sbjct: 61 ISDVNMPDMDGFKLLELVGLEMDLPVIMLSGYGDKERVMRGVIQGACDYLTKPVRIEELQ 120
Query: 144 NIWQHVVRKRWN---------ENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFK 194
NIWQHV+R+R + E K +G + + + E A + T+ K
Sbjct: 121 NIWQHVLRRRIDSKDKNKTASEGKGCSMAGKFANEEKARYMAGECSQAMAPKNNTDQNIK 180
Query: 195 AQRKR---ISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRIL 251
+KR +EE++ + E+++ S KKPR+VW ELH++F++AVN LGIDKA PKRIL
Sbjct: 181 LGQKRKELSEDEEEEEYDKENEEHSNQKKPRLVWDAELHRKFLAAVNHLGIDKAFPKRIL 240
Query: 252 ELMNVPGLTRENVASHLQEINLQKFRLYLKR 282
+LMNV GLTRENVASH LQK+RL L++
Sbjct: 241 DLMNVEGLTRENVASH-----LQKYRLGLRK 266
>gi|449443269|ref|XP_004139402.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449494037|ref|XP_004159429.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 699
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 146/305 (47%), Positives = 191/305 (62%), Gaps = 10/305 (3%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
+QFP G+RVL VDDD CL++LE +LR+C Y+VTT +QA AL +LRE K FD+V+SDV
Sbjct: 18 EQFPIGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVQALKMLRENKNRFDLVISDV 77
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+MPDMDGFKLLE +GLEMDLPVIM+SA V +G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 78 NMPDMDGFKLLELVGLEMDLPVIMLSAHSNTELVKKGVLHGACDYLLKPVRIEELKNIWQ 137
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R++ K S T + A S + G + + E+D
Sbjct: 138 HVLRRKKPSVKNQNKSIIGNNTSQSVEVAKGCPPAVSTDNEKSGKRQKDQDDDEEGGEED 197
Query: 208 GELESDDPSTTKKPRVVW---SVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 264
E+DD ST KKPRV W LH++FV+AVN LG +KAVPK+IL+LMNV GLTRENV
Sbjct: 198 STYENDDSSTQKKPRVNWYDGDENLHRKFVAAVNILGYEKAVPKKILDLMNVEGLTRENV 257
Query: 265 ASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIP 324
ASH LQK+R YLK+L S++ N A T+ + D ++ +G++
Sbjct: 258 ASH-----LQKYRQYLKKL--CSEESEQCNKMGAFGGTHTSFRPMASLDGFSMTGTGRLS 310
Query: 325 PQTLA 329
T +
Sbjct: 311 NATFS 315
>gi|302815333|ref|XP_002989348.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
gi|300142926|gb|EFJ09622.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
Length = 470
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/270 (57%), Positives = 189/270 (70%), Gaps = 23/270 (8%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP G+RVLVVDDD CL +L++ML +C Y+VT CS+A AL +LRE+K FD+V+SDV+M
Sbjct: 11 FPIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVISDVYM 70
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLE IGLEMDLPVIMMS +G S VM GI HGACDYL+KP+R EEL+NIWQHV
Sbjct: 71 PDMDGFKLLELIGLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNIWQHV 130
Query: 150 VRKRW-NENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 208
VRKR E + E+SG E+ S + E T K ++++ + D
Sbjct: 131 VRKRGAREAAKEESSG---------------EWDDSSEKFPEYTSKKRKEKDADSSGGDE 175
Query: 209 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 268
++E D S KK RVVWS +LH+ FV AVNQLG++KAVPKRILE+MNV GLTRENVASH
Sbjct: 176 QIE--DISGLKKARVVWSGDLHRLFVKAVNQLGVEKAVPKRILEIMNVQGLTRENVASH- 232
Query: 269 QEINLQKFRLYLKRLNGVSQQGGITNSFCA 298
LQK+RL LKRL+GV + SF A
Sbjct: 233 ----LQKYRLGLKRLSGVDMEPHPIASFQA 258
>gi|242085174|ref|XP_002443012.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
gi|241943705|gb|EES16850.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
Length = 551
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/258 (52%), Positives = 179/258 (69%), Gaps = 13/258 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK--GCFDVVLS 85
D FPAGLRVL VDDD CL+ILE+ L+ C YN T S A ALD+LRERK FD+V+S
Sbjct: 4 DTFPAGLRVLAVDDDRVCLKILERQLKYCNYNATVVSDARTALDMLRERKEGNQFDLVIS 63
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
DV MP+MDGFKLLE IGLEMDLPVIM+SA+ +M+GI+HGACDY++KP+R E+L+ I
Sbjct: 64 DVIMPNMDGFKLLELIGLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRGI 123
Query: 146 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 205
W HVV+ N+ + + NSGS ++ + G+ + N + + K +K + +E
Sbjct: 124 WTHVVKNSMNDPQNNINSGSDDDVQKLRYGNGDKGMKDGANHRNKYS-KKNKKVVDVADE 182
Query: 206 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
D S++ S KK RV W +LHQ+FV AV+Q+GID+A PK+IL +MNV GLTRENVA
Sbjct: 183 D-----SENTSAQKKQRVQWCGQLHQKFVEAVSQIGIDRAAPKKILAIMNVEGLTRENVA 237
Query: 266 SHLQEINLQKFRLYLKRL 283
SH LQK+R+YL++L
Sbjct: 238 SH-----LQKYRIYLRKL 250
>gi|302798186|ref|XP_002980853.1| type B response regulator [Selaginella moellendorffii]
gi|300151392|gb|EFJ18038.1| type B response regulator [Selaginella moellendorffii]
Length = 470
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/270 (56%), Positives = 187/270 (69%), Gaps = 23/270 (8%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP G+RVLVVDDD CL +L++ML +C Y+VT CS+A AL +LRE+K FD+V+SDV+M
Sbjct: 11 FPIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVISDVYM 70
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLE IGLEMDLPVIMMS +G S VM GI HGACDYL+KP+R EEL+NIWQHV
Sbjct: 71 PDMDGFKLLELIGLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNIWQHV 130
Query: 150 VRKRW-NENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 208
VRKR E + E+SG E+ S + E T K ++ + + D
Sbjct: 131 VRKRGAKEAAKEESSG---------------EWDDSSEKFPEYTSKKRKDKDADSSGGDD 175
Query: 209 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 268
+E D S KK RVVWS +LH+ FV AVNQLG++KAVPKRILE+M+V GLTRENVASH
Sbjct: 176 PIE--DMSGLKKARVVWSGDLHRLFVKAVNQLGVEKAVPKRILEIMSVQGLTRENVASH- 232
Query: 269 QEINLQKFRLYLKRLNGVSQQGGITNSFCA 298
LQK+RL LKRL+GV + SF A
Sbjct: 233 ----LQKYRLGLKRLSGVDMEPHPIASFQA 258
>gi|224141943|ref|XP_002324320.1| type-b response regulator [Populus trichocarpa]
gi|222865754|gb|EEF02885.1| type-b response regulator [Populus trichocarpa]
Length = 661
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 187/451 (41%), Positives = 263/451 (58%), Gaps = 43/451 (9%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL +LE +LRRC YNVTT SQA AL +LRE K FD+V+SDV
Sbjct: 13 DQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLRENKNKFDLVISDV 72
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI HGAC YL+KP+R EELK IWQ
Sbjct: 73 HMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACYYLLKPVRIEELKTIWQ 132
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R++ ++NK+ +S + D +GS E +N+ + +ED+
Sbjct: 133 HVIRRKKSDNKDRNSS---DNRDKPNQGSSEAVPDQKLNKKRK---DQNGDEDEDHDEDE 186
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
E E++DP+T KKPRVVWSVELH++FV+AVNQLG+DKAVPK+IL+LMNV LTREN
Sbjct: 187 DEHENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNVEKLTREN---- 242
Query: 268 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQ 326
K+R YLKR++ V+ QQ + + + + +++ S+ + +LA S Q
Sbjct: 243 -------KYRHYLKRISTVANQQANMVAALGSSDASYLQMNSMSVLGLHSLAGSVQFHST 295
Query: 327 TLAALHA----ELLGRPTGNLVTAVDQPALLQ--------ATLQGPKCI-PADH------ 367
+L + + L P + + P ++Q T G P H
Sbjct: 296 PFRSLQSSGMLDRLNSPAVLGIHGLPSPGVIQLGHVQTAPHTANGLSHFQPVGHRGNNGN 355
Query: 368 ---GVAFGQQLVKCQSNVPEN-LPQSIISVDDASTGFGVWASNSLGAVASTSNLGGLNPQ 423
G+ +L + QSN N +P+ +DD ++ S + +A +SN +
Sbjct: 356 ILQGMPMPLELDQIQSNKGVNYIPELPTHLDDTASFPVSSGSTDMKIIAGSSNSPFVGVS 415
Query: 424 NGNMLMDILHQQQQKQQNQQSQQQSTLSETS 454
N +++++ Q Q Q+S +QS+LS S
Sbjct: 416 NKHLMLE--GHGQGLQDGQKSGKQSSLSAGS 444
>gi|242070155|ref|XP_002450354.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
gi|241936197|gb|EES09342.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
Length = 694
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/280 (50%), Positives = 184/280 (65%), Gaps = 17/280 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC--FDVVLS 85
D FPAGLRVL VDDD CL+ILE+ L+ C YN T + A ALD+LRERK FD+V+S
Sbjct: 4 DTFPAGLRVLAVDDDRVCLKILERQLKYCNYNATVVTDARTALDMLRERKDGNQFDLVIS 63
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
DV MP+MDGFKLLE IGLEMDLPVIM+SA+ +M+GI+HGACDY++KP+R E+L+ I
Sbjct: 64 DVVMPNMDGFKLLELIGLEMDLPVIMLSANNETQTIMKGIKHGACDYIVKPVRLEQLRGI 123
Query: 146 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 205
W HVV+ + + +SG+ ++ G E S + E +RK+ S K +
Sbjct: 124 WTHVVKNGKTDPRNTISSGNDDDVQKLPSGD---ELPSGDADKDENIAANRRKKYSKKNK 180
Query: 206 DDGELESDDPSTT---KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 262
E+ +D T KK RV W +LH++FV AV+Q+GID AVPK+IL++MNV GLTRE
Sbjct: 181 RIVEVADEDNENTSAQKKQRVRWCGQLHRKFVEAVSQIGIDSAVPKKILKIMNVEGLTRE 240
Query: 263 NVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIET 302
NVASH LQK+R+YLK+L G +TNS ET
Sbjct: 241 NVASH-----LQKYRIYLKKLG----DGTLTNSNSFADET 271
>gi|224089346|ref|XP_002308698.1| type-b response regulator [Populus trichocarpa]
gi|222854674|gb|EEE92221.1| type-b response regulator [Populus trichocarpa]
Length = 588
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/327 (48%), Positives = 212/327 (64%), Gaps = 32/327 (9%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL +LE +LRRC Y VTT SQA AL +LRE K FD+V+SDV
Sbjct: 13 DQFPIGMRVLAVDDDPTCLLLLETLLRRCQYTVTTTSQAITALSMLRENKNKFDLVISDV 72
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDGFKLLE +GLEMDLPVIM+SA+G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 73 HMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 132
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R+R +NK+ +S + D +GS E +N+ + + + + E
Sbjct: 133 HVIRRRKYDNKDRNSS---DNRDKPNQGSSEAIPDQKLNKKRKDQNEDEDEDRDENEH-- 187
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
E++DP+T KKPRV LH++FV+AVNQLGIDKAVPK+IL+LMNV LTREN
Sbjct: 188 ---ENEDPATQKKPRV-----LHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN---- 235
Query: 268 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQ 326
K+RLYLKR++ V+ QQ + + + + +++ S+ + LA SGQ
Sbjct: 236 -------KYRLYLKRISTVANQQANMVAALGSSDASYLQMNSMNGMGLHNLAGSGQFHNT 288
Query: 327 TLAALHAELLGRPTGNLVTAVDQPALL 353
+L P+ +++ ++ PA+L
Sbjct: 289 PFRSL-------PSSGMLSRLNSPAVL 308
>gi|159485404|ref|XP_001700734.1| hypothetical protein CHLREDRAFT_113139 [Chlamydomonas reinhardtii]
gi|158281233|gb|EDP06988.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 235
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/241 (56%), Positives = 171/241 (70%), Gaps = 6/241 (2%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGLR+LVVDDD CL+++EQMLR+C Y VT CS A AL+ILR++ +D+VLSDV+M
Sbjct: 1 FPAGLRLLVVDDDPLCLKVVEQMLRKCSYEVTVCSNATTALNILRDKNTEYDLVLSDVYM 60
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGF+LLE +GLEMDLPVIMMS++G S V+RG+ HGACDYLIKP+R EEL+N+WQHV
Sbjct: 61 PDMDGFRLLELVGLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLWQHV 120
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
VR+ ++ + +G E G + + QR+R +
Sbjct: 121 VRR--RRQRKADAAGQRERRVGPLGGGACVRRVNRAQPSKLNQGHVQRERGRGRVGKAPL 178
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
L + KK RVVWSVE+HQQFV+AVNQLGIDKAVPK+ILE+M V GLTRENVASHLQ
Sbjct: 179 LN----GSNKKARVVWSVEMHQQFVNAVNQLGIDKAVPKKILEIMGVDGLTRENVASHLQ 234
Query: 270 E 270
+
Sbjct: 235 K 235
>gi|302852985|ref|XP_002958010.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
gi|300256682|gb|EFJ40943.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
Length = 254
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 140/243 (57%), Positives = 175/243 (72%), Gaps = 15/243 (6%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD--- 86
FPAGLR+LVVDDD CL+++EQMLR+C Y+VTTC+ A +AL++LR++ +D+VLSD
Sbjct: 24 FPAGLRLLVVDDDPLCLKVVEQMLRKCSYDVTTCTNATMALNLLRDKSTEYDLVLSDSFL 83
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
V DMDGFKLLE +GLEMDLPVIMMS++G S V+RG+ HGACDYLIKP+R EEL+N+W
Sbjct: 84 VSSSDMDGFKLLEVVGLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLW 143
Query: 147 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 206
QHVVR+R +G G++ + S+ N G T A D
Sbjct: 144 QHVVRRR--RQLRMMGAGC-------SGGANGL--GSTGNLGAVATGSAGLGLGLGTAAD 192
Query: 207 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 266
+ L D+ S +KK RVVWSVE+HQQFV+AVNQLGIDKAVPK+ILE+MNV GLTRENVAS
Sbjct: 193 ELGLGLDNGS-SKKARVVWSVEMHQQFVNAVNQLGIDKAVPKKILEIMNVDGLTRENVAS 251
Query: 267 HLQ 269
HLQ
Sbjct: 252 HLQ 254
>gi|118790775|tpd|FAA00258.1| TPA: response regulator [Oryza sativa Japonica Group]
Length = 690
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/269 (50%), Positives = 174/269 (64%), Gaps = 34/269 (12%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP GLRVL VDD CL +LE +LRRC Y T AA AL +LRER G FD+V+SDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
M DMDGFKLLE IGLEMDLPVIM SA+G + +M+G+ HGACDYL+KP+ ++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 149 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE--GTFKAQRKRISAKEED 206
V RKR + + H N G N+G E G + +RK D
Sbjct: 131 VWRKRKLDIRNH-NGG--------------------YNDGGELVGATRTKRKYTRKMRND 169
Query: 207 D---GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 263
GE + + ST K+ RVVW+ ELH+ FV AV++LG+D+AVP++IL +M V +TREN
Sbjct: 170 GDNYGENKENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTREN 229
Query: 264 VASHLQEINLQKFRLYLKRLNGVSQQGGI 292
+ASH LQK+RLYLKR +S Q G+
Sbjct: 230 IASH-----LQKYRLYLKR---ISTQTGM 250
>gi|297606271|ref|NP_001058204.2| Os06g0647200 [Oryza sativa Japonica Group]
gi|255677276|dbj|BAF20118.2| Os06g0647200 [Oryza sativa Japonica Group]
Length = 663
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/289 (48%), Positives = 183/289 (63%), Gaps = 35/289 (12%)
Query: 10 SSGGSGYGSSRAADVAVP-DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAV 68
S+ G G++ AA A +FP GLRVL VDD CL +LE +LRRC Y T AA
Sbjct: 6 STHGGIQGTNMAATQATAARKFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAAT 65
Query: 69 ALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHG 128
AL +LRER G FD+V+SDVHM DMDGFKLLE IGLEMDLPVIM SA+G + +M+G+ HG
Sbjct: 66 ALRMLRERPGDFDLVISDVHMLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHG 125
Query: 129 ACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEG 188
ACDYL+KP+ ++++NIWQHV RKR + + H N G N+G
Sbjct: 126 ACDYLVKPVSLKDIQNIWQHVWRKRKLDIRNH-NGG--------------------YNDG 164
Query: 189 TE--GTFKAQRKRISAKEEDD---GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID 243
E G + +RK D GE + + ST K+ RVVW+ ELH+ FV AV++LG+D
Sbjct: 165 GELVGATRTKRKYTRKMRNDGDNYGENKENMDSTLKRQRVVWTPELHRDFVIAVHELGVD 224
Query: 244 KAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGI 292
+AVP++IL +M V +TREN+ASH LQK+RLYLKR +S Q G+
Sbjct: 225 RAVPRKILRMMKVDYMTRENIASH-----LQKYRLYLKR---ISTQTGM 265
>gi|125598040|gb|EAZ37820.1| hypothetical protein OsJ_22159 [Oryza sativa Japonica Group]
Length = 713
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/269 (50%), Positives = 174/269 (64%), Gaps = 34/269 (12%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP GLRVL VDD CL +LE +LRRC Y T AA AL +LRER G FD+V+SDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
M DMDGFKLLE IGLEMDLPVIM SA+G + +M+G+ HGACDYL+KP+ ++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 149 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE--GTFKAQRKRISAKEED 206
V RKR + + H N G N+G E G + +RK D
Sbjct: 131 VWRKRKLDIRNH-NGG--------------------YNDGGELVGATRTKRKYTRKMRND 169
Query: 207 D---GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 263
GE + + ST K+ RVVW+ ELH+ FV AV++LG+D+AVP++IL +M V +TREN
Sbjct: 170 GDNYGENKENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTREN 229
Query: 264 VASHLQEINLQKFRLYLKRLNGVSQQGGI 292
+ASH LQK+RLYLKR +S Q G+
Sbjct: 230 IASH-----LQKYRLYLKR---ISTQTGM 250
>gi|125556273|gb|EAZ01879.1| hypothetical protein OsI_23901 [Oryza sativa Indica Group]
Length = 684
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/269 (50%), Positives = 174/269 (64%), Gaps = 34/269 (12%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP GLRVL VDD CL +LE +LRRC Y T AA AL +LRER G FD+V+SDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
M DMDGFKLLE IGLEMDLPVIM SA+G + +M+G+ HGACDYL+KP+ ++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 149 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE--GTFKAQRKRISAKEED 206
V RKR + + H N G N+G E G + +RK D
Sbjct: 131 VWRKRKLDIRNH-NGG--------------------YNDGGELVGATRTKRKYTRKMRND 169
Query: 207 D---GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 263
GE + + ST K+ RVVW+ ELH+ FV AV++LG+D+AVP++IL +M V +TREN
Sbjct: 170 GDNYGENKENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTREN 229
Query: 264 VASHLQEINLQKFRLYLKRLNGVSQQGGI 292
+ASH LQK+RLYLKR +S Q G+
Sbjct: 230 IASH-----LQKYRLYLKR---ISTQTGM 250
>gi|51535423|dbj|BAD37322.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|51535645|dbj|BAD37619.1| putative response regulator 9 [Oryza sativa Japonica Group]
Length = 694
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/269 (50%), Positives = 174/269 (64%), Gaps = 34/269 (12%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP GLRVL VDD CL +LE +LRRC Y T AA AL +LRER G FD+V+SDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
M DMDGFKLLE IGLEMDLPVIM SA+G + +M+G+ HGACDYL+KP+ ++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 149 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE--GTFKAQRKRISAKEED 206
V RKR + + H N G N+G E G + +RK D
Sbjct: 131 VWRKRKLDIRNH-NGG--------------------YNDGGELVGATRTKRKYTRKMRND 169
Query: 207 D---GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 263
GE + + ST K+ RVVW+ ELH+ FV AV++LG+D+AVP++IL +M V +TREN
Sbjct: 170 GDNYGENKENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTREN 229
Query: 264 VASHLQEINLQKFRLYLKRLNGVSQQGGI 292
+ASH LQK+RLYLKR +S Q G+
Sbjct: 230 IASH-----LQKYRLYLKR---ISTQTGM 250
>gi|90658417|gb|ABD97105.1| SRR392 [Striga asiatica]
Length = 453
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/270 (56%), Positives = 188/270 (69%), Gaps = 24/270 (8%)
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MPDMDGFKLLEH+GLEMDLPVIMMSAD + VM+G+ HGACDYLIKP+R E LKNIWQH
Sbjct: 1 MPDMDGFKLLEHVGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRMEALKNIWQH 60
Query: 149 VVR--KRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 206
VVR K + KE E SGS+E+ + + D ++Y+SS NEG +K+ ++R +E +
Sbjct: 61 VVRKKKYEWKEKEQEQSGSVEDGERQPKQED-VDYSSSANEGN--NWKSSKRRKEDEEGE 117
Query: 207 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 266
D E ST KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+ILELM+VPGL+RENVAS
Sbjct: 118 DKEDT----STLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKKILELMSVPGLSRENVAS 173
Query: 267 HLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQAL----AASGQ 322
H LQK+RLYLKRL+G Q G+ NS+ P T+ G L ++ L AS
Sbjct: 174 H-----LQKYRLYLKRLSG-QHQNGLGNSYMGP--TDPSFGPLNPLNVNGLDFHTLASSP 225
Query: 323 IPPQTLAALHAELLGR-PTGN--LVTAVDQ 349
+P Q+LA++ A L R PT L + +DQ
Sbjct: 226 LPVQSLASIQAASLNRNPTNRFPLSSHIDQ 255
>gi|297733625|emb|CBI14872.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 131/252 (51%), Positives = 176/252 (69%), Gaps = 20/252 (7%)
Query: 52 MLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIM 111
ML++C Y +TTC A AL +L+ERK FD+++SDV+MPDMDGF+LLEH+ +EMDLPVI+
Sbjct: 1 MLKKCSYEMTTCCVARDALSMLQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDLPVIL 60
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
+S DG ++ VM+G++ GACDYL+KP+R EELKNIWQHV+RK+ +E K + S
Sbjct: 61 ISVDGEMNRVMKGVQSGACDYLLKPVRMEELKNIWQHVLRKKIHEGKNSQVMIS------ 114
Query: 172 HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQ 231
R S+E++ +N G E + +RK + + DD +S +PST+KK RVVWS++LHQ
Sbjct: 115 --RSSNELDDGQQLN-GGEVSATRKRKDMENRRHDDQ--KSVEPSTSKKARVVWSIDLHQ 169
Query: 232 QFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL---NGV-S 287
+FV V Q+G DKA PK+IL+LMNVP LTRENVASH LQK+R YL +L N V S
Sbjct: 170 KFVDVVTQIGYDKARPKKILDLMNVPWLTRENVASH-----LQKYRFYLSKLRKENKVKS 224
Query: 288 QQGGITNSFCAP 299
QG + F P
Sbjct: 225 SQGMMQQDFTRP 236
>gi|147805870|emb|CAN64871.1| hypothetical protein VITISV_039966 [Vitis vinifera]
Length = 570
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/305 (47%), Positives = 191/305 (62%), Gaps = 50/305 (16%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRR--------C-------LYNVTTCSQAAVALDI 72
D FPAGLRVL VDDD L+IL + R+ C L VTTC A AL +
Sbjct: 8 DAFPAGLRVLAVDDDPAWLKILLIIFRKKLNFAGVICRMFPKLYLARVTTCCVARDALSM 67
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDY 132
L+ERK FD+++SDV+MPDMDGF+LLEH+ +EMDLPVI++S DG ++ VM+GI+ GACDY
Sbjct: 68 LQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDLPVILISVDGEMNRVMKGIQSGACDY 127
Query: 133 LIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGT 192
L+KP+R EELKNIWQHV+RK+ +E K + S R S+E++ +N G E +
Sbjct: 128 LLKPVRMEELKNIWQHVLRKKIHEGKNSQVMIS--------RSSNELDDGQQLN-GGEVS 178
Query: 193 FKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDK-------- 244
+RK + + DD +S +PST+KK RVVWS++LHQ+FV V Q+G D+
Sbjct: 179 ATRKRKDMENRRHDDQ--KSVEPSTSKKARVVWSIDLHQKFVDVVTQIGYDRFCIDGVLM 236
Query: 245 ------AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL---NGV-SQQGGITN 294
A PK+IL+LMNVP LTRENVASHLQ +R YL +L N V S QG +
Sbjct: 237 VIHLTEARPKKILDLMNVPWLTRENVASHLQ------YRFYLSKLRKENEVKSSQGMMQQ 290
Query: 295 SFCAP 299
F P
Sbjct: 291 DFTRP 295
>gi|357480193|ref|XP_003610382.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355511437|gb|AES92579.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 633
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/253 (52%), Positives = 178/253 (70%), Gaps = 12/253 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP G+RVL VDDD T L++LE+ L C YNVTT +++ AL++LRE++ FD+++SDV+M
Sbjct: 17 FPVGMRVLAVDDDQTSLKVLEKHLLTCKYNVTTTTKSVEALELLREKRSMFDLIISDVNM 76
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
P+MDGFKLLE +GLEMDLP IM+S VM+G+ GACDYL+KPIR EELKNIWQHV
Sbjct: 77 PEMDGFKLLEQVGLEMDLPFIMLSGHDDRERVMKGVMKGACDYLVKPIRLEELKNIWQHV 136
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
VRK+ E+K+ +N G + + + S E ++ + + + ++++ +E D E
Sbjct: 137 VRKKI-ESKD-QNQGIISDGVSGQDTSSE-----NIPKKNKTHGRKRKEQSEEEEADTDE 189
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
++ ST KKPR VW ELH++FVS VN LG+DKA PK+I +LMNV GLTRENVASH
Sbjct: 190 ENDEEHSTRKKPRFVWDNELHKKFVSIVNLLGLDKAYPKKIRDLMNVEGLTRENVASH-- 247
Query: 270 EINLQKFRLYLKR 282
LQK+RL LKR
Sbjct: 248 ---LQKYRLSLKR 257
>gi|357480195|ref|XP_003610383.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511438|gb|AES92580.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 597
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/261 (50%), Positives = 181/261 (69%), Gaps = 21/261 (8%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAG+RVL VDDD T L++LE+ L C YNVTT ++ AL++LRE+K FD+V+SDV M
Sbjct: 20 FPAGMRVLAVDDDPTYLKVLEKQLLTCNYNVTTTTKPVEALELLREKKDMFDLVISDVSM 79
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
PDMDGFKLLE +GLEMDLP IM+S + + VM+ + HGAC+YL+KPIR EELK+IWQHV
Sbjct: 80 PDMDGFKLLEQVGLEMDLPFIMLSVNDDIEKVMKSVIHGACNYLVKPIRMEELKSIWQHV 139
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
VRK+ E+K+ +N G + + + G D SS N + ++++ +EE+ +
Sbjct: 140 VRKKI-ESKD-QNQGIISDGVY---GQD----TSSENIANKNKMHGRKRKEQTEEEEAEQ 190
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID-------KAVPKRILELMNVPGLTRE 262
+ ST KKPR+VW ELH++FVSAVN +G+D +A PK+IL+LMNV GLTRE
Sbjct: 191 DNDEKCSTRKKPRLVWDHELHRKFVSAVNHVGLDISSTVIAEASPKKILDLMNVEGLTRE 250
Query: 263 NVASHLQEINLQKFRLYLKRL 283
NV+SH LQ++R+ +K L
Sbjct: 251 NVSSH-----LQRYRIDIKWL 266
>gi|413954817|gb|AFW87466.1| putative two-component response regulator family protein [Zea mays]
Length = 671
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/258 (51%), Positives = 173/258 (67%), Gaps = 13/258 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC--FDVVLS 85
D FP GLRVL VDDD CL+ILE+ L+ C YN T + A ALD+LRERK FD+V+S
Sbjct: 4 DTFPVGLRVLAVDDDRVCLKILERQLKCCNYNTTVVTDAQTALDMLRERKDGNQFDLVIS 63
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
DV M MDGFKLLE IGLEMDLPVIM+SA+ +M+GI+HGACDY++KP+R E+L+ I
Sbjct: 64 DVVMTKMDGFKLLELIGLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRGI 123
Query: 146 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 205
W HVV+ ++ N GS + K S + + V E T + + + + K
Sbjct: 124 WTHVVKN--SKIDPRNNIGSDSDDVVQKLPSGDGDKGEKVGE----TRQKKYPKKNKKTV 177
Query: 206 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
D + +++ S KK RV W ELHQ+FV AV Q+GID+AVPK+ILE+M+V GLTRENVA
Sbjct: 178 DVADEDNEKTSAQKKQRVQWCGELHQKFVQAVRQIGIDRAVPKKILEIMDVEGLTRENVA 237
Query: 266 SHLQEINLQKFRLYLKRL 283
SH LQK+R+YL++L
Sbjct: 238 SH-----LQKYRIYLRKL 250
>gi|297796727|ref|XP_002866248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312083|gb|EFH42507.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 145/301 (48%), Positives = 193/301 (64%), Gaps = 18/301 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDD+ TCLR LE++L RC Y+VT ++ AL++LRE FD+V+SDV
Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALELLRENSNMFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
MPD DGFKLLE IGLEMDLPVIM+SA +VM+GI HGACDYL+KP+ +EL+NIW
Sbjct: 72 EMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWH 130
Query: 148 HVVRKRWNENKEHENSGS----LEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAK 203
HVV+K N +N G L ++ + S + N+ + + +
Sbjct: 131 HVVKK--NIKSYAKNIGPSRQLLPPSESNLVPSASKKRKEKANDSGDEDDSDREEDDGEG 188
Query: 204 EEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 263
E DG D+ T KKPRVVWS ELHQ+FVSAV QLG+DKAVPK+IL+LM++ GLTREN
Sbjct: 189 SEQDG----DEAGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTREN 244
Query: 264 VASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQI 323
VASH LQK+RLYLK+++ QQ ++F + ++ L ++ A+ QI
Sbjct: 245 VASH-----LQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLD--GLRDFTATRQI 297
Query: 324 P 324
P
Sbjct: 298 P 298
>gi|50400641|sp|Q9FGT7.2|ARR18_ARATH RecName: Full=Two-component response regulator ARR18
Length = 635
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/297 (48%), Positives = 191/297 (64%), Gaps = 17/297 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDD+ TCLR LE++L RC Y+VT ++ AL++LRE FD+V+SDV
Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
MPD DGFKLLE IGLEMDLPVIM+SA +VM+GI HGACDYL+KP+ +EL+NIW
Sbjct: 72 EMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWH 130
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HVV+K K + E+D S + + VN+ + + + E D
Sbjct: 131 HVVKKNI---KSYAKLLPPSESDSVPSASRKRK--DKVNDSGDEDDSDREEDDGEGSEQD 185
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
G D T KKPRVVWS ELHQ+FVSAV QLG+DKAVPK+IL+LM++ GLTRENVASH
Sbjct: 186 G----DGSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASH 241
Query: 268 LQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIP 324
LQK+RLYLK+++ QQ ++F + ++ L ++ A+ QIP
Sbjct: 242 -----LQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLD--GLRDFTAARQIP 291
>gi|255564288|ref|XP_002523141.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223537703|gb|EEF39326.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 473
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/280 (49%), Positives = 179/280 (63%), Gaps = 20/280 (7%)
Query: 15 GYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR 74
G S V ++FPAGLRVLVVDDD TCL ILE+MLR CLY VT C +A AL +LR
Sbjct: 16 GSSSLEKTSDCVSNEFPAGLRVLVVDDDRTCLLILEKMLRNCLYKVTKCRKAKDALSMLR 75
Query: 75 ERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLI 134
E K FD+V+ D+HMPDMDGF+LLE EM LPV+MMS+D + +G+ HGACDYLI
Sbjct: 76 EDKNKFDIVVIDLHMPDMDGFELLEIAEFEMGLPVVMMSSDDDHEVIKKGVLHGACDYLI 135
Query: 135 KPIREEELKNIWQHVVRKRWNENK-EHENSGSLEETD--HHKRGSDEIEYASSVNEGTEG 191
KP+R E LK IWQHV+RK+ N K E E LE+ K SD+ ++N
Sbjct: 136 KPVRMEALKMIWQHVIRKKKNTAKDELEQLIGLEDDILLLTKPDSDDDMIHGNLN----N 191
Query: 192 TFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRIL 251
T ++R+R E DD E DP+ T K R++W+ ELH++FV A N LG + AVP +IL
Sbjct: 192 TRNSKRRR--NNEYDD---EPSDPAATGKKRMIWTEELHEKFVRAFNHLGHENAVPLKIL 246
Query: 252 EL---MNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 288
E MNV +TRE++ASH LQK+R+YL++ + + Q
Sbjct: 247 ECLQRMNVHSITREHIASH-----LQKYRMYLRKQDDIPQ 281
>gi|357480191|ref|XP_003610381.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511436|gb|AES92578.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 593
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/255 (52%), Positives = 175/255 (68%), Gaps = 12/255 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
+ FP G+RVL VDDD TCL++LE+ L C YNVTT ++ AL++LRE++ FD+V+SDV
Sbjct: 15 EDFPVGMRVLAVDDDQTCLKLLEKFLLMCKYNVTTTTKPVEALELLREKRDMFDLVISDV 74
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
MP+MDGFKLLE +GLE+DLP IM+S + VM+G+ GACDYL+KPIR EELKNIWQ
Sbjct: 75 SMPEMDGFKLLEQVGLEIDLPFIMLSGNDDRERVMKGVMKGACDYLVKPIRLEELKNIWQ 134
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HVVRK+ E+K+ N G + TD E ++ N+ K Q + +EE+
Sbjct: 135 HVVRKKI-ESKDR-NKGII--TDGICSQDTSSENIANRNKTRGQKIKEQSEDEEEEEEEA 190
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
E ++ ST KKPR+VW ELH++FVS V+QL +A PK+I +LMNV GLTRENVASH
Sbjct: 191 EEDNDEERSTRKKPRLVWDDELHKKFVSIVSQL---EAYPKKICDLMNVEGLTRENVASH 247
Query: 268 LQEINLQKFRLYLKR 282
LQK++L LKR
Sbjct: 248 -----LQKYKLSLKR 257
>gi|145359387|ref|NP_200616.3| response regulator 18 [Arabidopsis thaliana]
gi|332009612|gb|AED96995.1| response regulator 18 [Arabidopsis thaliana]
Length = 618
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/291 (48%), Positives = 186/291 (63%), Gaps = 17/291 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL VDD+ TCLR LE++L RC Y+VT ++ AL++LRE FD+V+SDV MPD D
Sbjct: 1 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60
Query: 94 GFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
GFKLLE IGLEMDLPVIM+SA +VM+GI HGACDYL+KP+ +EL+NIW HVV+K
Sbjct: 61 GFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKKN 119
Query: 154 WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESD 213
K + E+D S + + VN+ + + + E DG D
Sbjct: 120 I---KSYAKLLPPSESDSVPSASRKRK--DKVNDSGDEDDSDREEDDGEGSEQDG----D 170
Query: 214 DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINL 273
T KKPRVVWS ELHQ+FVSAV QLG+DKAVPK+IL+LM++ GLTRENVASH L
Sbjct: 171 GSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASH-----L 225
Query: 274 QKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIP 324
QK+RLYLK+++ QQ ++F + ++ L ++ A+ QIP
Sbjct: 226 QKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLD--GLRDFTAARQIP 274
>gi|9759533|dbj|BAB10999.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/297 (48%), Positives = 188/297 (63%), Gaps = 20/297 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDD+ TCLR LE++L RC Y+VT ++ AL++LRE FD+V+SDV
Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
MPD DGFKLLE IGLEMDLPVI S +VM+GI HGACDYL+KP+ +EL+NIW
Sbjct: 72 EMPDTDGFKLLE-IGLEMDLPVITHSD---YDSVMKGIIHGACDYLVKPVGLKELQNIWH 127
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HVV+K K + E+D S + + VN+ + + + E D
Sbjct: 128 HVVKKNI---KSYAKLLPPSESDSVPSASRKRK--DKVNDSGDEDDSDREEDDGEGSEQD 182
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
G D T KKPRVVWS ELHQ+FVSAV QLG+DKAVPK+IL+LM++ GLTRENVASH
Sbjct: 183 G----DGSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASH 238
Query: 268 LQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIP 324
LQK+RLYLK+++ QQ ++F + ++ L ++ A+ QIP
Sbjct: 239 -----LQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLD--GLRDFTAARQIP 288
>gi|255547922|ref|XP_002515018.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546069|gb|EEF47572.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 419
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 135/255 (52%), Positives = 168/255 (65%), Gaps = 29/255 (11%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGLRVLVVD+D T RILE+ML++C Y V TC + AL++LR RK +D+V+ DV
Sbjct: 14 FPAGLRVLVVDNDPTWSRILEKMLKKCSYQVATCG-SRDALNMLRGRKDEYDIVICDVTT 72
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
DMDGF+LLEHIGL+MD PVI SA SA+ +G+RHGACDYL+KPIR +EL+NIWQHV
Sbjct: 73 SDMDGFRLLEHIGLKMDCPVINASALXXASALQKGVRHGACDYLLKPIRMKELRNIWQHV 132
Query: 150 VRKRWNENKEHENSGSLEETDHHK-RGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 208
RKR +E +E E GS + D RG D +SV + KA
Sbjct: 133 FRKRIHEVRECEILGSDQACDGPLLRGED----LASVKKRKYADQKA------------- 175
Query: 209 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 268
D S+ K R+VW+V+LHQ+FV AV+Q+G DK PK+IL+ MNVP LTRENVA H
Sbjct: 176 -----DISSAKMARLVWTVDLHQKFVKAVHQIGFDKIGPKKILDRMNVPWLTRENVAGH- 229
Query: 269 QEINLQKFRLYLKRL 283
LQK+RLYL RL
Sbjct: 230 ----LQKYRLYLSRL 240
>gi|147835104|emb|CAN70187.1| hypothetical protein VITISV_039080 [Vitis vinifera]
Length = 650
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 172/280 (61%), Gaps = 30/280 (10%)
Query: 16 YGSSRAADVAVPD----QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALD 71
+G + D P QFP GLRVL VDD+I CL+IL +L +C Y VT ++A AL+
Sbjct: 134 FGLDMSDDYETPSPDGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALE 193
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACD 131
+LRE + FD+V++DV MPDMDGF LL+ IGLEMD+PVIM S + S V++GIRHGA D
Sbjct: 194 MLRENRXNFDIVITDVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARD 253
Query: 132 YLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEG 191
YL+KP+R E+KNIWQHVVRK D K G E E A + + E
Sbjct: 254 YLLKPVRVLEIKNIWQHVVRKNL--------------FDSGKPGVKE-EKAMEMEKSKEK 298
Query: 192 TFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGI-DKAVPKRI 250
+ + +E E D S KK R+ W+ ELH +F++A++QL DKAVPK+I
Sbjct: 299 EGGGEEEEEDHPKEHSFE----DGSVRKKQRLNWTSELHIKFLNAIHQLETADKAVPKKI 354
Query: 251 LELMNVPGLTRENVASHLQEINLQKFRLYLKR-LNGVSQQ 289
LE+MN PGL+RENVASH LQK+R L++ VSQQ
Sbjct: 355 LEIMNEPGLSRENVASH-----LQKYRKMLRKNCAKVSQQ 389
>gi|225446094|ref|XP_002270118.1| PREDICTED: uncharacterized protein LOC100266808 [Vitis vinifera]
Length = 643
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 171/280 (61%), Gaps = 29/280 (10%)
Query: 16 YGSSRAADVAVPD----QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALD 71
+G + D P QFP GLRVL VDD+I CL+IL +L +C Y VT ++A AL+
Sbjct: 126 FGLDMSDDYETPSPDGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALE 185
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACD 131
+LRE + FD+V++DV MPDMDGF LL+ IGLEMD+PVIM S + S V++GIRHGA D
Sbjct: 186 MLRENRENFDIVITDVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARD 245
Query: 132 YLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEG 191
YL+KP+R E+KNIWQHVVRK D K G E E +
Sbjct: 246 YLLKPVRVLEIKNIWQHVVRKNL--------------FDSGKPGVKE----EKAMEMEKS 287
Query: 192 TFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGI-DKAVPKRI 250
K + +E+ E +D S KK R+ W+ ELH +F++A++QL DKAVPK+I
Sbjct: 288 KEKGGGEEEEEEEDHPKEHSFEDGSVRKKQRLNWTSELHIKFLNAIHQLETADKAVPKKI 347
Query: 251 LELMNVPGLTRENVASHLQEINLQKFRLYLKR-LNGVSQQ 289
LE+MN PGL+RENVASH LQK+R L++ VSQQ
Sbjct: 348 LEIMNEPGLSRENVASH-----LQKYRKMLRKNCAKVSQQ 382
>gi|242093586|ref|XP_002437283.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
gi|241915506|gb|EER88650.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
Length = 685
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/279 (44%), Positives = 170/279 (60%), Gaps = 52/279 (18%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC---FDVVL 84
D FPAGLRVL V+ D C ++LE+ L+ C YN T + A ALD+LRERK FD+V+
Sbjct: 4 DTFPAGLRVLAVEHDRVCRKVLERQLQYCNYNATMVTNAQTALDMLRERKEYGNQFDLVI 63
Query: 85 SDVHMP--DMDGFKLLEHIGLEMDLPVI------------------MMSADGRVSAVMRG 124
S+V MP +MDGFKLLE IGLEMDLPVI ++SA+ +M+G
Sbjct: 64 SNVVMPKPNMDGFKLLELIGLEMDLPVICNKALAQTYFLHFYGTLYVLSANSETQTIMKG 123
Query: 125 IRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASS 184
I+HGAC+Y++KP+R E+L+ IW HVV+ +TDH R
Sbjct: 124 IKHGACEYMVKPVRLEQLRGIWTHVVKN--------------SKTDHAIR-------KLP 162
Query: 185 VNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDK 244
+G + +++ ++ DD + + ST KK RV W ELHQ+FV A+NQ+G+D+
Sbjct: 163 CGDGDKVKNYSRKNKMVVDVADDDKDNT---STQKKQRVQWCGELHQKFVQAINQIGMDR 219
Query: 245 AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 283
AVPK+ILE+MNV GLT+ENVASH LQK+R+YL++L
Sbjct: 220 AVPKKILEVMNVEGLTKENVASH-----LQKYRIYLRKL 253
>gi|109631200|gb|ABG35776.1| SRR380 [Striga asiatica]
Length = 432
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 145/202 (71%), Gaps = 16/202 (7%)
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MPDMDGFKLLE +GLEMDLPVIM+SA+ VM+G+ HGACDYL+KP+R EEL+NIWQH
Sbjct: 1 MPDMDGFKLLEQVGLEMDLPVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRNIWQH 60
Query: 149 VVRKR----WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 204
V+R++ NENK + S + + + G A N G ++++
Sbjct: 61 VIRRKKFVSKNENKSADQSKPNQASGEGQGG------AIPDNGDQNGKTNVRKRKDDENV 114
Query: 205 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 264
+DG E++DP+T KKPRVVWS+ELH++FV+AVNQLGI+KAVPKRIL+LMNV GLTRENV
Sbjct: 115 SEDGN-ENEDPATQKKPRVVWSIELHRKFVAAVNQLGIEKAVPKRILDLMNVNGLTRENV 173
Query: 265 ASHLQEINLQKFRLYLKRLNGV 286
ASH LQK+RLYLKR++ V
Sbjct: 174 ASH-----LQKYRLYLKRISSV 190
>gi|356573692|ref|XP_003554991.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 315
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 119/257 (46%), Positives = 158/257 (61%), Gaps = 25/257 (9%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
GL V+ VDDD T L I++QM +C Y V T S A AL+ + E K DV+L DVH+P+M
Sbjct: 13 GLWVVAVDDDTTILEIIKQMGFKCHYRVATFSDAPDALNYVLENKDRIDVILVDVHLPNM 72
Query: 93 DGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
DG++ L+HI E+D+PVI+MS DG SAV + I HGACDY KP E + K +W+HV K
Sbjct: 73 DGYEFLKHINKEIDIPVIIMSVDGSTSAVRKAITHGACDYWTKPFSENQFKIMWKHVAMK 132
Query: 153 RWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELES 212
WNE K + S E+ASSV + K Q++ S +E D +
Sbjct: 133 AWNEKKLQKKDFS--------------EFASSV---LDANLKDQKEISSNSKESDVD--- 172
Query: 213 DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEIN 272
D + KKPR+ W ELH QFV AV +G+DKA PK+ILE+MN+PGLT+++VASH
Sbjct: 173 DCDAQPKKPRIAWKGELHCQFVKAVMHIGLDKAQPKKILEVMNIPGLTKDHVASH----- 227
Query: 273 LQKFRLYLKRLNGVSQQ 289
LQK+R LK+ N V+ Q
Sbjct: 228 LQKYRFDLKKSNEVAVQ 244
>gi|147775384|emb|CAN78184.1| hypothetical protein VITISV_031283 [Vitis vinifera]
Length = 609
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/265 (41%), Positives = 165/265 (62%), Gaps = 14/265 (5%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
GL ++VVDDD+ CL I+ +L+ Y V T + A AL LR R F ++++DVHMP+M
Sbjct: 20 GLHIMVVDDDVICLSIVAGILKTWKYEVVTVNSAQDALTTLRTRSNFFHLIVTDVHMPEM 79
Query: 93 DGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
DGF+ + E LPV+MMSAD + S+++RG+ GA Y++KP+ ++LKN+WQ+ V
Sbjct: 80 DGFEFQRLVHEEFHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQYAVGX 139
Query: 153 RWNENKEHENSGSLEETDH----HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 208
+ + K H +E T K ++E+E S +NE ++RK + E +G
Sbjct: 140 K--KGKSHIVMQEIERTQGASXLEKTSNNEVE--SLMNEEKHNKRDSKRKTLKKTNEGNG 195
Query: 209 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 268
+ E + KK +V+W+ LH +F+ A ++G+++AVPKRILE+MNVPGLTRENVASH
Sbjct: 196 K-EKSETVAPKKAKVIWTSALHNRFLEAARKIGLERAVPKRILEIMNVPGLTRENVASH- 253
Query: 269 QEINLQKFRLYLKRLNGVSQQGGIT 293
LQK+R++LKR+ S G IT
Sbjct: 254 ----LQKYRIFLKRVMETSSSGTIT 274
>gi|255636387|gb|ACU18532.1| unknown [Glycine max]
Length = 220
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 146/217 (67%), Gaps = 19/217 (8%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD CL++LE +LR+C Y+VTT +QA AL +LRE + FD+V+SDV
Sbjct: 13 DRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLVISDV 72
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+MPD+DGFKLLE +GLEMDLPVIM+SA G VM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 73 NMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQ 132
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKA-QRKRISAKEED 206
HVVR++ N + +N S EE + +A ++G A Q KR+ K +D
Sbjct: 133 HVVRRK-NFDSRDQNKASNEEKAPN--------FAGGGSQGLRSENSADQNKRLGKKRKD 183
Query: 207 DG---------ELESDDPSTTKKPRVVWSVELHQQFV 234
+ +DPS KK RVVWSVELH++FV
Sbjct: 184 QSDEEEEGGEENEDDEDPSAQKKARVVWSVELHRKFV 220
>gi|356554487|ref|XP_003545577.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 379
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/247 (46%), Positives = 160/247 (64%), Gaps = 8/247 (3%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP GL V+ +DDD CL +LE ++ +C YNVTT +QA L +LR+ FD+++SDV
Sbjct: 74 DRFPVGLCVVAIDDDQMCLTVLENLIHKCHYNVTTTNQAIKVLXMLRKNINKFDLLISDV 133
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI--MMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
++PDMDGFKLLE +GL+MDLP I + + + + GAC+YL KPIR EEL+NI
Sbjct: 134 NIPDMDGFKLLELVGLQMDLPFITKIKHLYSVFTFIQLDVIQGACEYLTKPIRIEELQNI 193
Query: 146 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 205
W+HV+R R ++K+ + + EE + G E A + T+ K +KR E+
Sbjct: 194 WKHVLRMRI-DSKDKNKTFANEEKASYMAG--ECSQAMAPKNNTDQNIKLGQKRKEQSED 250
Query: 206 DDGELESDDPST---TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 262
++ E + KPR+VW VELH++F+ AV+ LGIDKA PKRIL+LMNV GLTRE
Sbjct: 251 EEEEEYHKENEEHLNQNKPRLVWDVELHRKFLVAVDDLGIDKAFPKRILDLMNVEGLTRE 310
Query: 263 NVASHLQ 269
NVASHLQ
Sbjct: 311 NVASHLQ 317
>gi|224143763|ref|XP_002325066.1| type-b response regulator [Populus trichocarpa]
gi|222866500|gb|EEF03631.1| type-b response regulator [Populus trichocarpa]
Length = 517
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/258 (46%), Positives = 165/258 (63%), Gaps = 22/258 (8%)
Query: 28 DQF-PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
D F PA LRVL +D ++ CL+ L +L++C Y VT+ + AA AL +LRE K + VV++D
Sbjct: 20 DMFNPADLRVLAIDANVVCLKYLVAILQKCQYRVTSTTLAAEALKMLRENKNDYHVVITD 79
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
V DMDGFKLLE IGLEMDLPVI++SA+ S++M+GIRHGA DYL+KP+R +E++NIW
Sbjct: 80 VKRLDMDGFKLLEIIGLEMDLPVILVSAEDSQSSIMKGIRHGARDYLLKPVRIQEMQNIW 139
Query: 147 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 206
QHVVRKR +++ + +S + E + S E A+ + KE++
Sbjct: 140 QHVVRKRLSDSSDKSSSFTKEIIEQESVPSTEP--------------MAEAEVTGVKEKE 185
Query: 207 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGI--DKAVPKRILELMNVPGLTRENV 264
+ D + KKPRV WS ELH +FV V +L ++ PKRI E+MNV GL+REN+
Sbjct: 186 IIGNPNGDACSGKKPRVTWSSELHVKFVDCVEKLEARGERVQPKRIREMMNVEGLSRENI 245
Query: 265 ASHLQEINLQKFRLYLKR 282
ASH LQK+R LK+
Sbjct: 246 ASH-----LQKYRNLLKK 258
>gi|255539557|ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223549958|gb|EEF51445.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 754
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/259 (42%), Positives = 158/259 (61%), Gaps = 23/259 (8%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+++L+VDDD L I+ ML+ C V T AL L+ G FD+V++D+HMP M+
Sbjct: 21 VQILIVDDDAPTLGIVSSMLKTCSLQVVTVKNPLDALSSLQSSDGAFDLVITDLHMPGMN 80
Query: 94 GFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH----- 148
G +L + I E +PV++MS+DG+ SA++ + GA Y++KP+ +LKN+WQ+
Sbjct: 81 GIQLQKQIDEEFKIPVVIMSSDGKRSAILESLESGAVYYMVKPVNLRDLKNVWQYAMASK 140
Query: 149 ----VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 204
VV EN + E S S E + S E ++SV+ E K ++ + A++
Sbjct: 141 KGKEVVVAEEPENNDGEASASTE------KDSCEDNNSASVSANEESNNKKKKGKKRARD 194
Query: 205 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 264
D GE D PS KK +VVW+ LH +F+ A+N +G+DKAVPKRILE MNVPGLTRENV
Sbjct: 195 HDQGE---DAPSAPKKAKVVWTNSLHNRFLQAINHIGLDKAVPKRILEFMNVPGLTRENV 251
Query: 265 ASHLQEINLQKFRLYLKRL 283
ASH LQK+RL+LK++
Sbjct: 252 ASH-----LQKYRLFLKKV 265
>gi|308812550|ref|XP_003083582.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
gi|116055463|emb|CAL58131.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
Length = 297
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 151/232 (65%), Gaps = 38/232 (16%)
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MPD+DGFKLLE I E++LPV+MMSA+ S V+RGI HGA DYL+KP+R EEL+NIWQH
Sbjct: 1 MPDVDGFKLLEIIQFELNLPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQH 60
Query: 149 VVRKRWNENKEHENSGSLE-----------ETDHHKRGSDEIEYASSVNEGTEGTFKAQR 197
VVR+ ++ NSGS + +T S+E+E A+ NE G+ KA++
Sbjct: 61 VVRRDYSA----RNSGSEDGVNPSSPSKRLKTSGSDSKSEEVERAA--NEA--GSSKARK 112
Query: 198 KRISAK-----EEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 252
K K +E + E + D ++KKPRVVWS ELH QFV+AVNQLGIDKAVPKRIL+
Sbjct: 113 KPAGKKGAKGSKEKEAERKGDAIDSSKKPRVVWSAELHTQFVTAVNQLGIDKAVPKRILD 172
Query: 253 LMNVPGLTRENVASHLQEINLQKFRLYLKRLNG---------VSQQGGITNS 295
LM + GLTRENVASH LQK+RLYLKRL G S GG++ S
Sbjct: 173 LMGIQGLTRENVASH-----LQKYRLYLKRLQGNDLMRNGSNASSSGGVSQS 219
>gi|224136878|ref|XP_002322438.1| type-b response regulator [Populus trichocarpa]
gi|222869434|gb|EEF06565.1| type-b response regulator [Populus trichocarpa]
Length = 716
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/267 (40%), Positives = 156/267 (58%), Gaps = 28/267 (10%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYN--------VTTCSQAAVALDILRERKGCFDVVLS 85
+++LVVDDD T L I+ ML+ C Y V T AL LR +KG FD+V++
Sbjct: 18 IKILVVDDDSTSLSIVSAMLKTCSYKENRKLELFVVTVKNPFDALSTLRLKKGLFDLVVT 77
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
D+HMP+M+G +L + + E LPVI+MS+D ++R + GA Y++KPI +++LKN+
Sbjct: 78 DLHMPEMNGMELQQQVDEEFKLPVIIMSSDDSEKVILRTLEGGAAFYIVKPINKDDLKNV 137
Query: 146 WQHVVRKRWNENKE--HENSGSLEETDH----HKRGSDEIEYASSVNE---GTEGTFKAQ 196
WQ+ V + + E GS E + K DE+ A S N +
Sbjct: 138 WQYAVATKTGKYSLSIKEIGGSQESSSSTVFDQKISVDEVSSAKSTNIKICNEKDRINKN 197
Query: 197 RKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNV 256
RKR +E D +L KKP+VVW+ LH +F+ A+N +G+DKAVPKRILE M+V
Sbjct: 198 RKRTKEDQEVDSQL------APKKPKVVWTNSLHSRFLQAINHIGLDKAVPKRILEFMSV 251
Query: 257 PGLTRENVASHLQEINLQKFRLYLKRL 283
PGL+RENVASH LQK+R++LK++
Sbjct: 252 PGLSRENVASH-----LQKYRIFLKKV 273
>gi|297741112|emb|CBI31843.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 156/251 (62%), Gaps = 10/251 (3%)
Query: 45 CLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE 104
CL I+ +LR Y V T AL LR F +V++DVHMP++DGF+ + + E
Sbjct: 33 CLSIVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE 92
Query: 105 MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSG 164
LPV+MMSAD + S++++G+ GA Y++KP+ ++LKNIWQ+ V R + + + ++ G
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYAVGPRKDNSVDMQDVG 152
Query: 165 SL--EETDHHKRGSD--EIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKK 220
EE+ K D +IE SSVNE + ++K ED G+ E+ D + K+
Sbjct: 153 PAPEEESPVEKTPDDPVDIESVSSVNEVNQSKRDPKKKASKRVIEDSGK-ENSDAVSPKR 211
Query: 221 PRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYL 280
+VVW+ LH +F+ AV ++G+++AVPKRILELMN+PGLTRENVASH LQK+R++L
Sbjct: 212 TKVVWTSALHTRFLEAVRKIGLERAVPKRILELMNMPGLTRENVASH-----LQKYRIFL 266
Query: 281 KRLNGVSQQGG 291
+R+ S G
Sbjct: 267 RRVAEASNSTG 277
>gi|147765741|emb|CAN73375.1| hypothetical protein VITISV_019100 [Vitis vinifera]
Length = 659
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 156/251 (62%), Gaps = 10/251 (3%)
Query: 45 CLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE 104
CL I+ +LR Y V T AL LR F +V++DVHMP++DGF+ + + E
Sbjct: 33 CLSIVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE 92
Query: 105 MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSG 164
LPV+MMSAD + S++++G+ GA Y++KP+ ++LKNIWQ+ V R + + + ++ G
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYAVGPRKDNSVDMQDVG 152
Query: 165 SL--EETDHHKRGSD--EIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKK 220
EE+ K D +IE SSVNE + ++K ED G+ E+ D + K+
Sbjct: 153 PAPEEESPVEKTPDDPVDIESVSSVNEVNQSKRDPKKKASKRVIEDSGK-ENSDAVSPKR 211
Query: 221 PRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYL 280
+VVW+ LH +F+ AV ++G+++AVPKRILELMN+PGLTRENVASH LQK+R++L
Sbjct: 212 TKVVWTSALHTRFLEAVRKIGLERAVPKRILELMNMPGLTRENVASH-----LQKYRIFL 266
Query: 281 KRLNGVSQQGG 291
+R+ S G
Sbjct: 267 RRVAEASNSTG 277
>gi|358345518|ref|XP_003636824.1| Response regulator [Medicago truncatula]
gi|358348887|ref|XP_003638473.1| Response regulator [Medicago truncatula]
gi|355502759|gb|AES83962.1| Response regulator [Medicago truncatula]
gi|355504408|gb|AES85611.1| Response regulator [Medicago truncatula]
Length = 240
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 160/269 (59%), Gaps = 68/269 (25%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VD D T L LE LR C Y+VTT SQA AL +LRE K FD+V++DV
Sbjct: 6 DRFPIGMRVLAVDGDSTHLSDLETRLRSCQYHVTTTSQAKTALTMLRENKDKFDLVIADV 65
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMM---SADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
H+PDMDG KLLE + LE DLPV++M S+D + VM+ + HGA D+L+KP+R +ELK
Sbjct: 66 HLPDMDGLKLLELVELETDLPVVVMLSESSDNEL--VMKAVFHGASDFLVKPVRLQELKT 123
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 204
IWQHV+RK+ K++E+ AQ+K S
Sbjct: 124 IWQHVIRKK----KDNED------------------------------LSAQKKSQS--- 146
Query: 205 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 264
VWSVELH +FV+AVNQLGIDKAVP++IL LMNV +TRE+V
Sbjct: 147 -------------------VWSVELHHKFVAAVNQLGIDKAVPEKILGLMNVENITREDV 187
Query: 265 ASHLQEINLQKFRL--YLKRLNGVSQQGG 291
ASH L+K+RL Y+K+++ V+ Q
Sbjct: 188 ASH-----LRKYRLIDYVKKVSSVANQHA 211
>gi|109631198|gb|ABG35775.1| SRR383 [Striga asiatica]
Length = 456
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 145/220 (65%), Gaps = 22/220 (10%)
Query: 121 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHE--NSGSLEETDHHKRGSDE 178
VM+G+ HGACDYLIKP+R E LKNIWQHV+RK+ E KE E SGS+EE++ + D
Sbjct: 3 VMKGVTHGACDYLIKPVRMEALKNIWQHVIRKKKYEWKEKEQEQSGSVEESERQPKPED- 61
Query: 179 IEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVN 238
++Y+SS NEG +RK + ++ + ST KKPRVVWSVELHQQFV+AVN
Sbjct: 62 LDYSSSANEGNNWKSSKKRKDDDDEGDERDDT-----STLKKPRVVWSVELHQQFVTAVN 116
Query: 239 QLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 298
QLGIDKAVPK+ILELM++PGLTRENVASH LQK+RLYLKRL+G G+ N F
Sbjct: 117 QLGIDKAVPKKILELMSIPGLTRENVASH-----LQKYRLYLKRLSG-QHHNGLGNPFMG 170
Query: 299 PIETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGR 338
P T+ G + +S + PPQ+LA + A R
Sbjct: 171 P--TDPSFGPITPL------SSFEFPPQSLATIQAASTNR 202
>gi|224120138|ref|XP_002318254.1| type-b response regulator [Populus trichocarpa]
gi|222858927|gb|EEE96474.1| type-b response regulator [Populus trichocarpa]
Length = 658
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 171/296 (57%), Gaps = 47/296 (15%)
Query: 18 SSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYN--------VTTCSQAAVA 69
SS A ++P + +L+VDDD T L ++ L+ Y V T + A
Sbjct: 6 SSNALSSSLPK-----IHILIVDDDSTSLSVVSATLKTVSYKDNRNLELIVVTVKKPFDA 60
Query: 70 LDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGA 129
L ILR +KG FD+V+SD+HMP+M+G +L + + E LPVI+MS+D + + R + GA
Sbjct: 61 LSILRLKKGLFDLVVSDLHMPEMNGMELQKQVEEEFKLPVIIMSSDESKNVISRSLEGGA 120
Query: 130 CDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASS----- 184
Y++KP + +LKN+W + V + NS S++E + GS E Y+S+
Sbjct: 121 AFYIVKPANKVDLKNVWHYAVAIKTG------NSLSIKEIE----GSREPSYSSTLVERL 170
Query: 185 ----VNEGTEGTFKAQRKRISAKEE-----DDGELESDDPSTTKKPRVVWSVELHQQFVS 235
VN T + + ++ KEE DD E++S S KKP+VVW+ LH +F+
Sbjct: 171 SLEDVNSATSINDEKRYRKNGRKEERKSTKDDQEVDSQPAS--KKPKVVWTNSLHNRFLL 228
Query: 236 AVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGG 291
A+N +G+DKAVPKRILE M+V GL+REN+ASH LQK+R++LK+ V+++GG
Sbjct: 229 ALNHIGLDKAVPKRILECMSVRGLSRENIASH-----LQKYRIFLKK---VAERGG 276
>gi|147782854|emb|CAN61302.1| hypothetical protein VITISV_003290 [Vitis vinifera]
Length = 594
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 152/291 (52%), Gaps = 64/291 (21%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLY----NVTTCS------------------------- 64
+RV+VVDDDI CL I+ ML+ Y NV C+
Sbjct: 21 IRVMVVDDDIICLSIVAGMLKTWKYQDMLNVVFCNFIKIIRQGCIRGEEASTRNGISSSV 80
Query: 65 ----QAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSA 120
A AL LR R F +V++DVHMP MDGF+ + + E +LPV+MMSAD + S+
Sbjct: 81 VSVKNAEDALITLRTRSNFFHLVVTDVHMPKMDGFEFQKQVREEFNLPVVMMSADDKESS 140
Query: 121 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIE 180
++RG+ GA Y++KP+ ++LK++WQ+ + R +GS +
Sbjct: 141 ILRGLEAGAAFYIVKPVNYDDLKDLWQYALSPR--------------------KGSVSVX 180
Query: 181 YASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 240
+ N+ + +K+ K + E E + +K +VVW+ LH F+ A+ ++
Sbjct: 181 HEEMQNK------RDSKKKAGKKVNEGNEQEKSEAIVPRKSKVVWTTALHNDFLEAIRKI 234
Query: 241 GIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGG 291
G+++AVPKRILE MN PGLTRENVASH LQK+R++LKR+ S G
Sbjct: 235 GLERAVPKRILEHMNEPGLTRENVASH-----LQKYRIFLKRVTEASSSDG 280
>gi|224130168|ref|XP_002320769.1| pseudo response regulator [Populus trichocarpa]
gi|222861542|gb|EEE99084.1| pseudo response regulator [Populus trichocarpa]
Length = 504
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 163/273 (59%), Gaps = 20/273 (7%)
Query: 18 SSRAADVAVPDQ----FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
S R V V + FP G+R+LVV+ D TCLRI+ +ML+ Y VTT ++A AL IL
Sbjct: 3 SERVLSVEVTENNAGSFPIGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALRIL 62
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYL 133
RE++ +++L + +PDM+ +++LE +G LP+++ SAD SA++ + GA YL
Sbjct: 63 REKEDEINLILIETRLPDMNQYEILETLGELSSLPIVVFSADNNESAMLGCLYKGAALYL 122
Query: 134 IKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEG----T 189
+KPI + ++KN+WQ R + + S S G E ASSV G T
Sbjct: 123 MKPIIKNDVKNLWQLTYRTKIKTAVSGKGSNSF-------HGGSSEEKASSVTAGNPSST 175
Query: 190 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 249
G + KR +E ++ + ++++ + KK ++VW+ ELH +F+ A+ LGID A PK+
Sbjct: 176 MGMTDQKGKRKELEETNNDDEDNNNLTVPKKRKLVWTNELHNRFLQAIRILGIDGAHPKK 235
Query: 250 ILELMNVPGLTRENVASHLQEINLQKFRLYLKR 282
IL+ MNVPGL +ENV+SH LQK+RLYLKR
Sbjct: 236 ILQHMNVPGLKKENVSSH-----LQKYRLYLKR 263
>gi|297792183|ref|XP_002863976.1| hypothetical protein ARALYDRAFT_357174 [Arabidopsis lyrata subsp.
lyrata]
gi|297309811|gb|EFH40235.1| hypothetical protein ARALYDRAFT_357174 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/248 (43%), Positives = 153/248 (61%), Gaps = 14/248 (5%)
Query: 27 PDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
P FP GLR+LV D+D + L++LE L++ Y VT C++ A+ LR + FD+ +
Sbjct: 32 PSNFPEGLRMLVFDEDSSHLQMLETNLQKFQYQVTICNEENKAMYALRNHRNRFDIAIIQ 91
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
+ D D F+ L IG EMDLP+I++S D V +VM+ + +GA DYLIKPI+ EEL+ I+
Sbjct: 92 GNNSDGDMFRFLSEIGSEMDLPIIIISEDKSVQSVMKWMINGATDYLIKPIKPEELRIIF 151
Query: 147 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 206
+H+V+K + +G EE K G E +SSV + T +++ + E
Sbjct: 152 KHLVKKV--RERRSVVTGEAEE----KAGG---EKSSSVGDSTIRNPNKRKRSMCLDAEV 202
Query: 207 DGELESDD-----PSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 261
+ E D +++KK RVVW+ ELH++FV AV LG+DKAVPK+ILELMNV L+R
Sbjct: 203 NEEDRHDHNDRACAASSKKRRVVWTKELHKKFVDAVEYLGLDKAVPKKILELMNVENLSR 262
Query: 262 ENVASHLQ 269
ENVASHLQ
Sbjct: 263 ENVASHLQ 270
>gi|31338862|dbj|BAC77081.1| B-type response regulator [Oryza glaberrima]
Length = 341
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
+P GLRVLV+DDD + L ++E +L +C Y VTT A+ + + D+V+SD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
P DG +L+ + + +P ++M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHI 126
Query: 150 VRKRWNENKEHENSGSLEETDHHKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED- 206
RK+ ++K + G+LE+ H A++ + TE + +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTKSTATEALLAPLENEVRDDMVNY 186
Query: 207 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 266
+GE+ D +K R+ W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VAS
Sbjct: 187 NGEIT--DIRDLRKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVAS 244
Query: 267 HLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 298
H LQK+R+ LK+ + + G T S A
Sbjct: 245 H-----LQKYRMQLKKSIPTTSKHGATLSSTA 271
>gi|75327667|sp|Q7Y0W5.1|EHD1_ORYSJ RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338856|dbj|BAC77078.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
+P GLRVLV+DDD + L ++E +L +C Y VTT A+ + + D+V+SD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
P DG +L+ + + +P ++M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 150 VRKRWNENKEHENSGSLEETDHHKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED- 206
RK+ ++K + G+LE+ H A++ + TE + + +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNY 186
Query: 207 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 266
+GE+ D K R+ W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VAS
Sbjct: 187 NGEIT--DIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVAS 244
Query: 267 HLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 298
H LQK+R+ LK+ + + G T S A
Sbjct: 245 H-----LQKYRMQLKKSIPTTSKHGATLSSTA 271
>gi|75327665|sp|Q7Y0W3.1|EHD1_ORYSI RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338860|dbj|BAC77080.1| B-type response regulator [Oryza sativa Indica Group]
Length = 341
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
+P GLRVLV+DDD + L ++E +L +C Y VTT A+ + + D+V+SD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
P DG +L+ + + +P ++M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 150 VRKRWNENKEHENSGSLEETDHHKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED- 206
RK+ ++K + G+LE+ H A++ + TE + + +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNY 186
Query: 207 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 266
+GE+ D K R+ W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VAS
Sbjct: 187 NGEIT--DIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVAS 244
Query: 267 HLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 298
H LQK+R+ LK+ + + G T S A
Sbjct: 245 H-----LQKYRMQLKKSIPTTSKHGATLSSTA 271
>gi|449528748|ref|XP_004171365.1| PREDICTED: uncharacterized protein LOC101224737 [Cucumis sativus]
Length = 631
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 148/256 (57%), Gaps = 25/256 (9%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ +L+VDDD T L I+ MLR C Y V T ALD LR RKG FD+V++D+HMP M+
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 94 GFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
G +L + + E LPVIMMSAD + S +++ + G Y++KPI +++K++WQ+ + +
Sbjct: 69 GLQLQKKVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQYAITPK 128
Query: 154 WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESD 213
++ + I+ S+++ + + K I + + +++
Sbjct: 129 --------------NVIPNQTTTTVIQRQLSIDKSSSSSTPCSEKEIIKSKSRSSKFKNN 174
Query: 214 DPSTT------KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
+K +V+W+ LH +F+ A+ +G+ KAVPK+ILE MNVPGLTRENVASH
Sbjct: 175 KAKQNSINIPIRKSKVIWTNSLHNRFLQAIKLIGLHKAVPKKILEFMNVPGLTRENVASH 234
Query: 268 LQEINLQKFRLYLKRL 283
LQK+R++LKR+
Sbjct: 235 -----LQKYRIFLKRV 245
>gi|449446191|ref|XP_004140855.1| PREDICTED: uncharacterized protein LOC101217116 [Cucumis sativus]
Length = 634
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 148/256 (57%), Gaps = 25/256 (9%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ +L+VDDD T L I+ MLR C Y V T ALD LR RKG FD+V++D+HMP M+
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 94 GFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
G +L + + E LPVIMMSAD + S +++ + G Y++KPI +++K++WQ+ + +
Sbjct: 69 GLQLQKKVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQYAITPK 128
Query: 154 WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESD 213
++ + I+ S+++ + + K I + + +++
Sbjct: 129 --------------NVIPNQTTTTVIQRQLSIDKSSSSSTPCSEKEIIKSKSRSSKFKNN 174
Query: 214 DPST------TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
+K +V+W+ LH +F+ A+ +G+ KAVPK+ILE MNVPGLTRENVASH
Sbjct: 175 KAKQNSINIPIRKSKVIWTNSLHNRFLQAIKLIGLHKAVPKKILEFMNVPGLTRENVASH 234
Query: 268 LQEINLQKFRLYLKRL 283
LQK+R++LKR+
Sbjct: 235 -----LQKYRIFLKRV 245
>gi|297735376|emb|CBI17816.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 178 bits (452), Expect = 7e-42, Method: Composition-based stats.
Identities = 100/216 (46%), Positives = 132/216 (61%), Gaps = 20/216 (9%)
Query: 27 PD--QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
PD QFP GLRVL VDD+I CL+IL +L +C Y VT ++A AL++LRE + FD+V+
Sbjct: 10 PDGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIVI 69
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
+DV MPDMDGF LL+ IGLEMD+PVIM S + S V++GIRHGA DYL+KP+R E+KN
Sbjct: 70 TDVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKN 129
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 204
IWQHVVRK D K G E E + K + +E
Sbjct: 130 IWQHVVRKNL--------------FDSGKPGVKE----EKAMEMEKSKEKGGGEEEEEEE 171
Query: 205 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 240
+ E +D S KK R+ W+ ELH +F++A++QL
Sbjct: 172 DHPKEHSFEDGSVRKKQRLNWTSELHIKFLNAIHQL 207
>gi|224063953|ref|XP_002301318.1| predicted protein [Populus trichocarpa]
gi|222843044|gb|EEE80591.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/270 (39%), Positives = 163/270 (60%), Gaps = 19/270 (7%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
F G+R+LVV+ D TCLRI+ +ML+ Y VTT ++A AL ILRE++ +++L + H+
Sbjct: 19 FAEGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALHILREKEDEINLILIETHL 78
Query: 90 PDMDGFKLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
PDMD ++++E + + LP+++ SAD VSA++ + GA YL+KPI + ++KN+WQ
Sbjct: 79 PDMDQYEIIETVRAMSSSLPIVVFSADNNVSAMLGWLYKGAALYLMKPIVKNDVKNLWQL 138
Query: 149 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEG------TEGTFKAQRKRISA 202
RK K+ S+ H ++E ASSV G T G KR
Sbjct: 139 TYRK-----KKKTAVSSVGSNSFHAGLAEE--NASSVTAGIPSLLSTTGQSDQMGKRKEL 191
Query: 203 KEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 262
+E D+ + ++D+ + KKP +VW+ ELH +F+ A+ LG+D A PK+IL+ MNV GL +E
Sbjct: 192 EETDNDDEDNDNLTVLKKPELVWTNELHNRFLQAIRILGVDGAHPKKILQHMNVSGLKKE 251
Query: 263 NVASHLQEINLQKFRLYLKRLNGVSQQGGI 292
NV+SH LQK+RL LKR +Q+ I
Sbjct: 252 NVSSH-----LQKYRLSLKREQDTTQKTMI 276
>gi|31338858|dbj|BAC77079.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 155/272 (56%), Gaps = 10/272 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
+P GLRVLV+DDD + L ++E +L +C Y VTT A+ + + D+V+SD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
P DG +L+ + + +P ++M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 150 VRKRWNENKEHENSGSLEETDHHKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED- 206
RK+ ++K + G+LE+ H A++ + TE + + +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNY 186
Query: 207 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 266
+GE+ D K R+ W+ +LH+QF++AVN L DKAVPK+IL +M V LTRE VAS
Sbjct: 187 NGEIT--DIRDLGKSRLTWTTQLHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVAS 244
Query: 267 HLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 298
H LQK+R+ LK+ + + G T S A
Sbjct: 245 H-----LQKYRMQLKKSIPTTSKHGATLSSTA 271
>gi|412992344|emb|CCO20057.1| type-b response regulator [Bathycoccus prasinos]
Length = 580
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 117/169 (69%), Gaps = 3/169 (1%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVLVVDDD+ CL+I+ +ML++C Y VT+ + + AL+ LR +K FD+VLSDVHMPDMD
Sbjct: 12 LRVLVVDDDVLCLKIVTKMLQKCGYTVTSTTSSVTALEYLRTKKEEFDIVLSDVHMPDMD 71
Query: 94 GFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
GFKLLE I L++D+PV+MMS + S V+RGI HGA DYL+KP+R ELKNIWQHVVRK
Sbjct: 72 GFKLLEQIALDIDIPVLMMSVNADQSVVLRGIIHGAVDYLLKPVRIHELKNIWQHVVRKN 131
Query: 154 WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 202
++ + S S+ RGS E + S +N + GT ++ R A
Sbjct: 132 GPDSLQRSGSMSMSPA-RSGRGSPEKD--SGMNATSNGTHMNKKLRTIA 177
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 59/67 (88%), Gaps = 5/67 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KKPRVVWS ELHQQFV+AVNQLGIDKAVPKRIL+LMNV GLTRENVASH LQK+RL
Sbjct: 340 KKPRVVWSAELHQQFVNAVNQLGIDKAVPKRILDLMNVQGLTRENVASH-----LQKYRL 394
Query: 279 YLKRLNG 285
YLKRL G
Sbjct: 395 YLKRLQG 401
>gi|255541448|ref|XP_002511788.1| sensor histidine kinase, putative [Ricinus communis]
gi|223548968|gb|EEF50457.1| sensor histidine kinase, putative [Ricinus communis]
Length = 437
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 164/297 (55%), Gaps = 20/297 (6%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
AG+ +LVVD D CL I+ +ML Y V T +A AL ILRER+ D++L++VH+PD
Sbjct: 17 AGVSILVVDCDSACLAIVSKMLYISGYKVITAKRATDALHILRERQYELDLILTEVHLPD 76
Query: 92 MDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 151
MD ++LLE + LP++++SAD +A++ + GA YL+KPI ++K++WQ
Sbjct: 77 MDKYELLETMAEVSCLPIVILSADDDENAMLGCLFKGAVFYLLKPITMNDVKSLWQFSCV 136
Query: 152 KRWNENKEHENSGSLEETDHHKRGSDEI------EYASSVNEGTEGTFKAQRKRISAKEE 205
K N E S S +H + EI E S ++ + K++ K + +E
Sbjct: 137 KNRKNNVATEGSHS-----YHGHSTPEIASNEASECLSVLDTSQQNAQKSEGKEL--QEM 189
Query: 206 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
D E + + KKP+++W+ ELH +F+ A+ LGID A PK+IL+ MNVPGL +EN++
Sbjct: 190 DKDEEATVTSTFPKKPKLIWTNELHDRFLQAIRILGIDSAHPKKILKHMNVPGLRKENIS 249
Query: 266 SHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQ 322
SH LQK+RL LKR Q+ + P N++ G+ Q L Q
Sbjct: 250 SH-----LQKYRLSLKREQEAIQKTMYRDDHYPP--WNLETGTCEFLKAQFLMTRSQ 299
>gi|224120142|ref|XP_002318255.1| predicted protein [Populus trichocarpa]
gi|222858928|gb|EEE96475.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 150/246 (60%), Gaps = 34/246 (13%)
Query: 60 VTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVS 119
V T + AL ILR +KG FD+V+SD+HMP+M+G +L + + E LPVI+MS+D +
Sbjct: 16 VVTVKKPFDALSILRLKKGLFDLVVSDLHMPEMNGMELQKQVEEEFKLPVIIMSSDESKN 75
Query: 120 AVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEI 179
+ R + GA Y++KP + +LKN+W + V + NS S++E + GS E
Sbjct: 76 VISRSLEGGAAFYIVKPANKVDLKNVWHYAVAIKTG------NSLSIKEIE----GSREP 125
Query: 180 EYASS---------VNEGTEGTFKAQRKRISAKEE-----DDGELESDDPSTTKKPRVVW 225
Y+S+ VN T + + ++ KEE DD E++S S KKP+VVW
Sbjct: 126 SYSSTLVERLSLEDVNSATSINDEKRYRKNGRKEERKSTKDDQEVDSQPAS--KKPKVVW 183
Query: 226 SVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNG 285
+ LH +F+ A+N +G+DKAVPKRILE M+V GL+REN+ASH LQK+R++LK+
Sbjct: 184 TNSLHNRFLLALNHIGLDKAVPKRILECMSVRGLSRENIASH-----LQKYRIFLKK--- 235
Query: 286 VSQQGG 291
V+++GG
Sbjct: 236 VAERGG 241
>gi|358345516|ref|XP_003636823.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|358348885|ref|XP_003638472.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355502758|gb|AES83961.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355504407|gb|AES85610.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|403502189|gb|AFR46617.1| response regulator 1 [Medicago truncatula]
Length = 228
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 144/257 (56%), Gaps = 71/257 (27%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD T L +LE +LR C Y+VTT S+A AL +L+E FD+V+++V
Sbjct: 6 DRFPIGMRVLAVDDDPTSLLLLETLLRSCQYHVTTTSEAITALTMLQENIDMFDLVIAEV 65
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
HMPDMDG KLLE +GLEMDLPVIM+SA G VM+ I HGA D+L+KP+R EEL+NIWQ
Sbjct: 66 HMPDMDGLKLLELVGLEMDLPVIMLSAHGETELVMKAISHGARDFLLKPVRLEELRNIWQ 125
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 207
HV+R NKE + S+E H++ + +VN+ G KA K+I
Sbjct: 126 HVIR-----NKESQFVWSVEL---HRK------FLETVNQ--LGVDKAVPKKI------- 162
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
+LMNV +TRE+VA+H
Sbjct: 163 -------------------------------------------FDLMNVENITREDVATH 179
Query: 268 LQEINLQKFRLYLKRLN 284
LQK+RL+LKR++
Sbjct: 180 -----LQKYRLFLKRMD 191
>gi|15239829|ref|NP_199735.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
gi|52783215|sp|Q9FJ16.1|APRR4_ARATH RecName: Full=Putative two-component response regulator-like APRR4;
AltName: Full=Pseudo-response regulator 4
gi|10177153|dbj|BAB10342.1| unnamed protein product [Arabidopsis thaliana]
gi|332008405|gb|AED95788.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
Length = 292
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 149/246 (60%), Gaps = 17/246 (6%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLV D+D + L ILE+ L++ Y VT C++ A+ LR + FD+ + V+
Sbjct: 38 FPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNN 97
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
+ D F+ L IG EMDLP+I++S D V +V + + +GA DYLIKPIR E+L+ +++H+
Sbjct: 98 AEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHL 157
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
V+K + +G E+ K +SSV + T + KR S E + E
Sbjct: 158 VKKM--RERRSVVTGEAEKAAGEK--------SSSVGDSTIRN-PNKSKRSSCLEAEVNE 206
Query: 210 LESDD------PSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 263
+ D S+ KK RVVW ELHQ F++AV+ LG+++AVPK+IL++M V ++REN
Sbjct: 207 EDRHDHNDRACASSAKKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISREN 266
Query: 264 VASHLQ 269
VASHLQ
Sbjct: 267 VASHLQ 272
>gi|294461183|gb|ADE76155.1| unknown [Picea sitchensis]
Length = 465
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 122/188 (64%), Gaps = 23/188 (12%)
Query: 111 MMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETD 170
+MS +G S VM+GI HGACDY IKPIR EEL+NIWQHVVR+R E+ + ++ G E+
Sbjct: 14 VMSTNGDTSVVMKGITHGACDYFIKPIRIEELRNIWQHVVRRRGRESLK-DDLGECED-- 70
Query: 171 HHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELH 230
+ SD E S +RK S+ + D + DD S+ K+ RV W+V+LH
Sbjct: 71 --REASDSPETTSK-----------KRKDTSSGDFSDEVI--DDISSLKRARVHWTVQLH 115
Query: 231 QQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
QQFV AVNQLGIDKAVPK+I+E+M V GL+RENVASH LQK+RLYLKRL+G +
Sbjct: 116 QQFVVAVNQLGIDKAVPKKIVEIMKVQGLSRENVASH-----LQKYRLYLKRLSGAISEP 170
Query: 291 GITNSFCA 298
SF A
Sbjct: 171 YPVASFQA 178
>gi|297821174|ref|XP_002878470.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
gi|297324308|gb|EFH54729.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
Length = 431
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 146/252 (57%), Gaps = 26/252 (10%)
Query: 28 DQFPA-GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
++FP +RVL+VD D L ++ ++ + Y VT A+ L + K D+V+ D
Sbjct: 34 EEFPTTSIRVLLVDADSNSLLPMKNLMIQYSYQVTKYEDGEEAMAFLMKNKQEIDLVIWD 93
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
HMPD++G L IG EMDLPV++MS D + VM I++GACD+L+KP+ +E + +W
Sbjct: 94 FHMPDINGLDALNTIGKEMDLPVVIMSHDHKKETVMESIKYGACDFLVKPVSKEVIAVLW 153
Query: 147 QHVVRKRWNE---NKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAK 203
+HV RKR ++ +K E SG++E SD EY + G + +++ +
Sbjct: 154 RHVYRKRMSKSGLDKPGE-SGTVE--------SDPDEYD---DLGQDNLYQSNEEGSKNS 201
Query: 204 EEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRIL----ELMNVPG 258
+ GE + TKKPR+ W+ ELH +F AV +LG ++KA PK IL E MNV G
Sbjct: 202 SDQKGEKPA-----TKKPRMQWTTELHHKFEVAVEKLGSLEKAFPKTILKYMQEEMNVQG 256
Query: 259 LTRENVASHLQE 270
LTR NVASHLQ+
Sbjct: 257 LTRNNVASHLQK 268
>gi|357521359|ref|XP_003630968.1| Two-component response regulator ARR11 [Medicago truncatula]
gi|355524990|gb|AET05444.1| Two-component response regulator ARR11 [Medicago truncatula]
Length = 674
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 149/277 (53%), Gaps = 59/277 (21%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPA ++VLV+D DI L +E+ L + Y VTTC + A++++ + K FD+VL + M
Sbjct: 9 FPANVKVLVIDHDIHLLNAIEKKLSQFNYQVTTCWTVSSAMNLIAQ-KVHFDLVLLETQM 67
Query: 90 PDMDGFKLLEHIGLEMDLPVIM-MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
PDMD F L+ + ++D+PVIM M ++G + ++ I +GACD +KP E ++K +W H
Sbjct: 68 PDMDSFDFLQQLTQQIDIPVIMTMCSEGSTTGILNAIENGACDCWVKPFSENQVKYMWHH 127
Query: 149 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNE--GTEGTFKAQRKRISAKEED 206
VRK NK+ + +NE G EG+ +I A+++
Sbjct: 128 AVRKMMKGNKKQK-----------------------INEQLGVEGS------QIRARDDS 158
Query: 207 DGELESDD---------------PSTTKKPRVVWSVELHQQFVSAVNQL------GIDKA 245
+ L +D TKK RVVWS+ELH+QF+ AV +L KA
Sbjct: 159 NLCLNDEDIPEPPPTKKTKKRKKTKKTKKERVVWSLELHEQFMKAVKELDASSSSSSSKA 218
Query: 246 VPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR 282
VPK ILE M VPGLTRE V SH LQK+RLYL +
Sbjct: 219 VPKTILEHMKVPGLTREQVGSH-----LQKYRLYLNK 250
>gi|297741111|emb|CBI31842.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 130/209 (62%), Gaps = 14/209 (6%)
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MP+MDGF+ + E LPV+MMSAD + S+++RG+ GA Y++KP+ ++LKN+WQ+
Sbjct: 1 MPEMDGFEFQRLVHEEFHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQY 60
Query: 149 VVRKRWNENKEHENSGSLEETDH----HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 204
V + + K H +E T K ++E+E S +NE ++RK +
Sbjct: 61 AVGPK--KGKSHIVMQEIERTQGASQLEKTSNNEVE--SLMNEEKHNKRDSKRKTLKKAN 116
Query: 205 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 264
E +G+ E + KK +V+W+ LH +F+ A ++G+++AVPKRILE+MNVPGLTRENV
Sbjct: 117 EGNGK-EKSETVAPKKAKVIWTSALHNRFLEAARKIGLERAVPKRILEIMNVPGLTRENV 175
Query: 265 ASHLQEINLQKFRLYLKRLNGVSQQGGIT 293
ASH LQK+R++LKR+ S G IT
Sbjct: 176 ASH-----LQKYRIFLKRVMETSSSGTIT 199
>gi|50400670|sp|Q9M9B9.2|ARR19_ARATH RecName: Full=Putative two-component response regulator ARR19
Length = 407
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 148/268 (55%), Gaps = 41/268 (15%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
QFP VLVVD + T L ++Q++++ Y V+ + A AL L K ++V+ D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MP +DG + L+ I ++DLPV++MS D + +VM+ +GACDY++KP++EE + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 149 VVRKR---------------WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTF 193
+VRKR W+E + S L TD G D + S G G
Sbjct: 149 IVRKRLIFKPDVAPPKPRMTWSEVFQPVQS-HLVPTD----GLDRDHFDSITINGGNGIQ 203
Query: 194 KAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILE 252
++K + P +KPR+ W+ ELHQ+F+ A+ + GI+KA PK ++E
Sbjct: 204 NMEKK------------QGKKP---RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVE 248
Query: 253 L---MNVPGLTRENVASHLQE--INLQK 275
M + G+TR NVASHLQ+ INL++
Sbjct: 249 CLQEMRIEGITRSNVASHLQKHRINLEE 276
>gi|357488511|ref|XP_003614543.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355515878|gb|AES97501.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 304
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 134/253 (52%), Gaps = 64/253 (25%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GL V+ +D D T L +E+M RC Y VT C+ A+ AL++L ERK CFDV+L D HM
Sbjct: 10 FPDGLNVIAIDHDTTFLNTIEEMCNRCHYQVTKCNTASEALNLL-ERKDCFDVMLIDAHM 68
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
P+MD + ++H ++++PVI ++V + I +GAC+Y KP+ EE+ K +WQHV
Sbjct: 69 PNMDAYDFVQHATGQLNIPVI-------SNSVTKSITYGACEYWTKPLYEEQFKIMWQHV 121
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 209
RK ENK+H++ GSL+ H KR D+
Sbjct: 122 ARKGLRENKKHKSVGSLDVQGHRKRERDD------------------------------- 150
Query: 210 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
D+ KKPR++ QF KA PK IL+ +++ GL+ +VASH
Sbjct: 151 ---DNVPNVKKPRLM-------QF----------KAKPKVILKRIDIHGLSAGHVASH-- 188
Query: 270 EINLQKFRLYLKR 282
LQK+R YLKR
Sbjct: 189 ---LQKYRNYLKR 198
>gi|357519887|ref|XP_003630232.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355524254|gb|AET04708.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 234
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 97/153 (63%), Gaps = 2/153 (1%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
++P QFP L VLVVD D L +M C Y VTTCS+A+ A +L E KGC DVVL
Sbjct: 9 SLPSQFPEDLNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCVDVVL 68
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
+ MPDMD + + H+ ++++ VIMM DG +AVM+ + +GAC++ IKP E ++KN
Sbjct: 69 IEAQMPDMDSYDFVRHVTQQINISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIENQIKN 128
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSD 177
+WQ V RK WNENK + G L+ KRGSD
Sbjct: 129 MWQCVARKVWNENK--HDLGILKVKSQSKRGSD 159
>gi|357519851|ref|XP_003630214.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355524236|gb|AET04690.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 265
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 97/153 (63%), Gaps = 2/153 (1%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
++P QFP L VLVVD D L +M C Y VTTCS+A+ A +L E KGC DVVL
Sbjct: 9 SLPSQFPEDLNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCVDVVL 68
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
+ MPDMD + + H+ ++++ VIMM DG +AVM+ + +GAC++ IKP E ++KN
Sbjct: 69 IEAQMPDMDSYDFVRHVTQQINISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIENQIKN 128
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSD 177
+WQ V RK WNENK + G L+ KRGSD
Sbjct: 129 MWQCVARKVWNENK--HDLGILKVKSQSKRGSD 159
>gi|357458949|ref|XP_003599755.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|357469643|ref|XP_003605106.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355488803|gb|AES70006.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355506161|gb|AES87303.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 247
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 125/235 (53%), Gaps = 42/235 (17%)
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACD 131
I +K CFDV+L D MP+MD ++H+ L++ +P IMM+ D +++M+ I GAC+
Sbjct: 31 ICWTKKCCFDVMLIDARMPNMDACDFVQHVSLQLQIPAIMMAVDSTKNSIMKSIECGACE 90
Query: 132 YLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEG 191
Y KP+ E++ K +WQHV RK ENKE+ GS
Sbjct: 91 YWTKPLIEKKFKTMWQHVARKGMPENKEYAIVGS-------------------------S 125
Query: 192 TFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRIL 251
+A RKR +E+ D E+ K R WS ELHQ+F+ AVNQLG+DKA PK+I
Sbjct: 126 MVQANRKR--GREDADASKETH----AKTARFSWSPELHQRFLWAVNQLGLDKATPKKIQ 179
Query: 252 ELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKL 306
++M+VP +T+E+V K+R Y+K + +G + S +P ET L
Sbjct: 180 KIMDVPNMTKEHV----------KYRNYIKS-STKETKGRMKKSKMSPFETQFSL 223
>gi|51038103|gb|AAT93906.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222631502|gb|EEE63634.1| hypothetical protein OsJ_18451 [Oryza sativa Japonica Group]
Length = 368
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 141/290 (48%), Gaps = 76/290 (26%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYN----------- 59
+G SS + +A + P G+RVL++D+ T L+I+ ++L C Y
Sbjct: 2 AGSCSVASSNKSKLADEEFSPVGMRVLLIDESTTYLKIITKLLLNCGYKGLTVTNFEITY 61
Query: 60 ------VTTCSQAAVALDILRERKGCFDVVLSDVHMP-DMDGFKLLEHIGLEMDLPVIMM 112
VT + A A++ L E +D+VL++VH P +DGF LL++ G +MDLPV++
Sbjct: 62 VWRVDEVTPKTAARDAVEELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVF 121
Query: 113 SADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHH 172
SAD V++ + GACDYL+KP+R EELKNIWQHV R++ SG
Sbjct: 122 SADDDKRTVLKCVNSGACDYLVKPLRHEELKNIWQHVYRRKL-------RSGG------- 167
Query: 173 KRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQ 232
R+ +A GE+ K R W ELH++
Sbjct: 168 ------------------------RRAAAAGNSSKGEI---------KKRFRWPKELHER 194
Query: 233 FVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR 282
FVS V QLG+DKA P +IL L+N LTR+ Q+FR+ L +
Sbjct: 195 FVSVVLQLGVDKATPNQILPLLNREDLTRD-----------QRFRIALTK 233
>gi|242034251|ref|XP_002464520.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
gi|241918374|gb|EER91518.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
Length = 302
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 130/235 (55%), Gaps = 29/235 (12%)
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREE 140
D+++SDV P D +L+ + + D+P ++MS++G S VM+ I GA D+LIKP+R E
Sbjct: 12 DLIISDVCFPTEDSLLILQEVTTKFDIPTVIMSSNGDASIVMKYITSGASDFLIKPVRIE 71
Query: 141 ELKNIWQHVVRKRW-NENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR 199
LKNIWQHV RK+ EN+ NS + D++ Y ++ + A R
Sbjct: 72 VLKNIWQHVFRKQLIGENRSCSNSA---------QHLDQVSYPPTIAPASTC---ATRTT 119
Query: 200 ISAKEEDDGELESDDPSTT----------KKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 249
E LES TT +K R+ W+ +LH+QF++AVN LG +KAVPK+
Sbjct: 120 GIITEAATATLESATRETTNGTVTDIQDLRKSRLSWTTQLHRQFIAAVNSLG-EKAVPKK 178
Query: 250 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNV 304
ILE M V LTRE VASH LQK+RL+L++LN + + P E+N+
Sbjct: 179 ILETMKVKHLTREQVASH-----LQKYRLHLRKLNQTLHKDDTPSPSSHPNESNI 228
>gi|147866630|emb|CAN81576.1| hypothetical protein VITISV_027774 [Vitis vinifera]
Length = 137
Score = 149 bits (377), Expect = 4e-33, Method: Composition-based stats.
Identities = 73/108 (67%), Positives = 85/108 (78%), Gaps = 4/108 (3%)
Query: 23 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
+V V DQF GL+VLVVDDD+T LRILEQMLR Y+VTTCSQA +AL+ILRE+K CFD+
Sbjct: 29 NVVVSDQFSTGLKVLVVDDDVTRLRILEQMLR---YHVTTCSQATIALNILREKKDCFDI 85
Query: 83 VLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGAC 130
VLSD +P M +KLLEH+GLE DLP+IMMSADGR AVMR H C
Sbjct: 86 VLSDARVPGMIDYKLLEHVGLETDLPIIMMSADGRTGAVMRD-SHSWC 132
>gi|147798455|emb|CAN72192.1| hypothetical protein VITISV_005693 [Vitis vinifera]
Length = 790
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 144/262 (54%), Gaps = 22/262 (8%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VLVVD D T L + MLR Y V T + AL ++ ERK D+V++++HMPDMDG
Sbjct: 23 VLVVDCDPTSLMTISGMLRALTYQVVTVERVTDALAMILERKDEVDLVMTELHMPDMDGL 82
Query: 96 KLLEHIGLEMDLPVI------------MMSADGRVSAVMRGIRHGACDYLIKPIREEELK 143
+LL+ I LPV+ +MSAD A++R + GA Y+ KP+ +K
Sbjct: 83 QLLDEIQKTSKLPVVNFFFFLDGNGNPVMSADAEEDAMLRSLNKGATYYMXKPVEMGSIK 142
Query: 144 NIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEY---ASSVNEGTEGTFKAQRKRI 200
N+WQ+V R +K+ + +G G +E + ++ ++ G G + +
Sbjct: 143 NLWQYVFLNR--RDKQLQKTGQKGGVQVESLGENESDVDAGSALISNGKHGYQEPTTDTV 200
Query: 201 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 260
++DD E ++ KK ++ W+ ELH +F+ A+ +LG+D A PK+IL LM V GLT
Sbjct: 201 ETDKDDDDEEDTLTSPIRKKAKLTWTTELHDKFLLAIGELGLDNAHPKKILHLMGVEGLT 260
Query: 261 RENVASHLQEINLQKFRLYLKR 282
+E+++SH LQK+RL +KR
Sbjct: 261 KEHISSH-----LQKYRLSVKR 277
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 5/154 (3%)
Query: 17 GSSRAADVAV-PDQFPAGLR---VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
GS +A+ +V P + G R VLVVD D TCL I+ MLR Y V T +A AL +
Sbjct: 500 GSEKASSSSVTPTEEFKGHRDICVLVVDCDPTCLMIVSGMLRALTYEVLTVDRAVDALAM 559
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDY 132
E D+V++++HMPDM G LL+ I LPV++MSAD +++ +R GA Y
Sbjct: 560 TLEGGCGVDLVMTELHMPDMYGLDLLDEIRRTSKLPVVIMSADSNEDVMLKSLRRGAEYY 619
Query: 133 LIKPIREEELKNIWQHVV-RKRWNENKEHENSGS 165
L+KP+ E++ N WQ+V R+R + E E GS
Sbjct: 620 LVKPVLMEDVTNFWQYVFKRRRQKLSLETEKKGS 653
>gi|50400667|sp|Q9LZJ8.1|ARR20_ARATH RecName: Full=Putative two-component response regulator ARR20
gi|7362747|emb|CAB83117.1| putative protein [Arabidopsis thaliana]
Length = 426
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 140/245 (57%), Gaps = 29/245 (11%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
RVL+V D L+ ++ + Y VT A+ L + K D+V+ D HMPD++G
Sbjct: 42 RVLLVGADSNS--SLKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDING 99
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 154
L IG +MDLPV++MS + + VM I++GACD+L+KP+ +E + +W+HV RKR
Sbjct: 100 LDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRM 159
Query: 155 NE---NKEHENSGSLE-ETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGEL 210
++ +K E SG++E + D + D++E + EG+ + KEE
Sbjct: 160 SKSGLDKPGE-SGTVESDPDEY----DDLEQDNLYESNEEGS----KNTCDHKEEK---- 206
Query: 211 ESDDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELM----NVPGLTRENVA 265
S TKKPR+ W+ ELH +F AV ++G ++KA PK IL+ M NV GLTR NVA
Sbjct: 207 -----SPTKKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVA 261
Query: 266 SHLQE 270
SHLQ+
Sbjct: 262 SHLQK 266
>gi|357503493|ref|XP_003622035.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355497050|gb|AES78253.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 602
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 125/222 (56%), Gaps = 25/222 (11%)
Query: 60 VTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVS 119
V T A AL L+E +G FD+V+++ H+ M+G + +HI + +P+IMMS D R S
Sbjct: 17 VVTAKDARHALITLQENEGLFDLVITEFHLVGMNGLEFQKHIKDQFQIPIIMMSEDNRPS 76
Query: 120 AVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEI 179
+ + + +GA Y++KP E+ K+IW++V+ + KE SL + + S E
Sbjct: 77 LISKTLENGAAQYIVKPFCAEDFKDIWKYVMEGK----KEKLFIESLFVRNEEEETSSEP 132
Query: 180 EYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQ 239
+ +E GE D KK ++VW+ LH+ F+ AVNQ
Sbjct: 133 KNKKK-------------HCKRKSKESQGE---KDIQVVKKQKLVWTPYLHKMFLLAVNQ 176
Query: 240 LGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLK 281
+G++KAVPK+ILE+MN+P LTRENVASH LQK+R++L+
Sbjct: 177 IGLEKAVPKKILEIMNIPNLTRENVASH-----LQKYRIFLR 213
>gi|255547920|ref|XP_002515017.1| Two-component response regulator ARR14, putative [Ricinus communis]
gi|223546068|gb|EEF47571.1| Two-component response regulator ARR14, putative [Ricinus communis]
Length = 338
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 130/226 (57%), Gaps = 24/226 (10%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRV+VVDDD T L ILE+ML+RC VTTC A L +LRE + +D+V+SDV
Sbjct: 11 DAFPAGLRVVVVDDDPTWLSILERMLKRCSCEVTTCCSARDVLALLRENRYGYDIVISDV 70
Query: 88 HMPDMDGFKLLEHIG----LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK 143
MP MD F L IG E ++S DG S VMRGI+ GAC+YL+KPIR +EL+
Sbjct: 71 IMPGMDVFLHLLFIGSMLLTEHLYRFTVISVDGERSRVMRGIQLGACEYLLKPIRMKELR 130
Query: 144 NIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYA-SSVNEGTEGTFKAQRKRISA 202
NI QHV R++ + + E S+E G+ +++ A + +++ G S
Sbjct: 131 NICQHVFRRKIQKEIDIE---SIE-------GTIQVQMAINGLDKSNGGHLLCGENLTSV 180
Query: 203 KEEDDGELESDDPS-----TTKKPRVVWSVELHQQFVSAVNQLGID 243
K + + + DD +TKK V++ HQ+F AVNQ+G D
Sbjct: 181 KIGKEVQNKHDDKGPGGNFSTKKSAVIF----HQKFDKAVNQIGPD 222
>gi|413943651|gb|AFW76300.1| putative two-component response regulator family protein [Zea mays]
Length = 378
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 115/197 (58%), Gaps = 23/197 (11%)
Query: 111 MMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETD 170
++SA+ +M+GI+HGACDY++KP+R E+L+ IW HVV+ NS + T
Sbjct: 15 VLSANSETRTIMKGIKHGACDYIVKPVRLEQLRGIWTHVVK----------NSRTDPRTS 64
Query: 171 HHKRGSDEIEYASSVNEGTEG------TFKAQRKRISAKEEDDGELESDDPSTTKKPRVV 224
GSD+ +G EG K + + + D S++ S KKPRV
Sbjct: 65 IIDSGSDDDVQKLPSGDGGEGDKVGANRRKKKCSKKNKPAVDVAGGHSENTSAQKKPRVQ 124
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W +LH++FV AV+Q+GIDKAVPK+ILE MNV G+TRENVASH LQK+R+YL++L
Sbjct: 125 WCGQLHRKFVEAVHQIGIDKAVPKKILEAMNVEGITRENVASH-----LQKYRIYLRKL- 178
Query: 285 GVSQQGGITNSFCAPIE 301
+ G +NSF E
Sbjct: 179 -IEGTLGNSNSFADETE 194
>gi|374095508|sp|Q9LYP5.3|ARR21_ARATH RecName: Full=Putative two-component response regulator ARR21
Length = 613
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 148/282 (52%), Gaps = 38/282 (13%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ V+VVDDD L I+ +ML+ Y V AL L+ ++ D++++D +MP M+
Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPGMN 75
Query: 94 GFKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
G +L + I E +LPV++MS+D + + GA ++ KPI +L I+Q +
Sbjct: 76 GLQLKKQITQEFGNLPVLVMSSD--TNKEEESLSCGAMGFIPKPIHPTDLTKIYQFALSN 133
Query: 153 RWN------ENKEHENSG---------SLEETDHHKRGSDEIEYAS---SVNE------G 188
+ N + H+++ E+ D K + S +VN
Sbjct: 134 KRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVNSTNGSCVS 193
Query: 189 TEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPK 248
T+G+ K ++++ + DDGE S KK ++ W+ LH F+ A+ +G+DKAVPK
Sbjct: 194 TDGSRKNRKRKPNGGPSDDGESMS---QPAKKKKIQWTDSLHDLFLQAIRHIGLDKAVPK 250
Query: 249 RILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
+IL M+VP LTRENVASH LQK+R++L+R V++QG
Sbjct: 251 KILAFMSVPYLTRENVASH-----LQKYRIFLRR---VAEQG 284
>gi|334186214|ref|NP_191826.2| putative two-component response regulator ARR20 [Arabidopsis
thaliana]
gi|332646857|gb|AEE80378.1| putative two-component response regulator ARR20 [Arabidopsis
thaliana]
Length = 352
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 125/210 (59%), Gaps = 27/210 (12%)
Query: 70 LDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGA 129
+ L + K D+V+ D HMPD++G L IG +MDLPV++MS + + VM I++GA
Sbjct: 1 MAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGA 60
Query: 130 CDYLIKPIREEELKNIWQHVVRKRWNE---NKEHENSGSLE-ETDHHKRGSDEIEYASSV 185
CD+L+KP+ +E + +W+HV RKR ++ +K E SG++E + D + D++E +
Sbjct: 61 CDFLVKPVSKEVIAVLWRHVYRKRMSKSGLDKPGE-SGTVESDPDEY----DDLEQDNLY 115
Query: 186 NEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDK 244
EG+ + KEE S TKKPR+ W+ ELH +F AV ++G ++K
Sbjct: 116 ESNEEGS----KNTCDHKEEK---------SPTKKPRMQWTPELHHKFEVAVEKMGSLEK 162
Query: 245 AVPKRILELM----NVPGLTRENVASHLQE 270
A PK IL+ M NV GLTR NVASHLQ+
Sbjct: 163 AFPKTILKYMQEELNVQGLTRNNVASHLQK 192
>gi|255573419|ref|XP_002527635.1| transcription factor, putative [Ricinus communis]
gi|223532940|gb|EEF34706.1| transcription factor, putative [Ricinus communis]
Length = 478
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 148/294 (50%), Gaps = 36/294 (12%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A +++ FP GLRVL++++D ++ L Y V+ AL + ++ F
Sbjct: 5 ANELSAWKDFPKGLRVLLLEEDSISAEEIKSKLEAMDYIVSLFCNENEALSAISDKPESF 64
Query: 81 DVVLSDVHMPDMDG-FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIRE 139
V + +V + +G FK LE DLP IM S +S +M+ I GA ++L KP+ E
Sbjct: 65 HVAIVEVSTSNSNGNFKFLE---TAKDLPTIMTSNIHCLSTMMKCIALGAVEFLRKPLSE 121
Query: 140 EELKNIWQHVVRKRWNEN--------KEHENSGS---LEETDHHKRGSDEIEYASSVNEG 188
E+L+NIWQHVV K +N K +SG+ + + +R + +E +V+
Sbjct: 122 EKLRNIWQHVVHKAFNAGGNVVSDSLKPVNDSGASIPQLKVETEERKNKNLERTENVSPA 181
Query: 189 TEGTFK----------AQRKRISAKEEDDGELESDDPSTT-----------KKPRVVWSV 227
E ++ ++ DG E+ + ++ KK +V W+
Sbjct: 182 HENEYEQSPLSDKYPAPSTPQLKQGASSDGSAENPNKASRHHKSYGTKVNRKKMKVDWTP 241
Query: 228 ELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLK 281
ELH++FV AV QLG+D+A+P RILE+M V GLTR NVASHLQ+ + K + K
Sbjct: 242 ELHKKFVQAVEQLGVDQAIPSRILEMMKVEGLTRHNVASHLQKFRMHKRHILPK 295
>gi|15240724|ref|NP_196338.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
gi|7546699|emb|CAB87277.1| putative protein [Arabidopsis thaliana]
gi|332003739|gb|AED91122.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
Length = 621
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 151/290 (52%), Gaps = 46/290 (15%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAV--------ALDILRERKGCFDVVLS 85
+ V+VVDDD L I+ +ML+ Y + + AV AL L+ ++ D++++
Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRDPSVMEIAVIAVDDPKKALSTLKIQRDNIDLIIT 75
Query: 86 DVHMPDMDGFKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
D +MP M+G +L + I E +LPV++MS+D + + GA ++ KPI +L
Sbjct: 76 DYYMPGMNGLQLKKQITQEFGNLPVLVMSSD--TNKEEESLSCGAMGFIPKPIHPTDLTK 133
Query: 145 IWQHVVRKRWN------ENKEHENSG---------SLEETDHHKRGSDEIEYAS---SVN 186
I+Q + + N + H+++ E+ D K + S +VN
Sbjct: 134 IYQFALSNKRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVN 193
Query: 187 E------GTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 240
T+G+ K ++++ + DDGE S KK ++ W+ LH F+ A+ +
Sbjct: 194 STNGSCVSTDGSRKNRKRKPNGGPSDDGESMS---QPAKKKKIQWTDSLHDLFLQAIRHI 250
Query: 241 GIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
G+DKAVPK+IL M+VP LTRENVASH LQK+R++L+R V++QG
Sbjct: 251 GLDKAVPKKILAFMSVPYLTRENVASH-----LQKYRIFLRR---VAEQG 292
>gi|356511480|ref|XP_003524454.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 480
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 147/301 (48%), Gaps = 43/301 (14%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A D+ FP GL+VL+++ D + L YNV+T + AL + F
Sbjct: 5 ANDLQEWKDFPKGLKVLLLERDNISAAEIRAKLEAMDYNVSTFCEENEALSAISSGLESF 64
Query: 81 DVVLSDVHMPD-MDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIRE 139
+ + +V GFK LE+ DLP IM S + ++ +M+ I GA ++L KP+ E
Sbjct: 65 HIAIVEVSSSSGQGGFKFLENAK---DLPTIMTSNNHCLNTMMKCIALGAVEFLRKPLSE 121
Query: 140 EELKNIWQHVVRKRWNEN-----------KEHENSGSLEETD---HHKRGSDEIEYASSV 185
++L+NIWQHVV K +N KE S +TD H R S +IE S
Sbjct: 122 DKLRNIWQHVVHKAFNARASILSESLKPVKESVVSMLQLQTDDEQHESRVSRDIEKVSRF 181
Query: 186 ----NEGTEGTFK-----AQRKRISAKEEDDGELESDDPSTT----------------KK 220
+E + G K + R + DDG+ + +T KK
Sbjct: 182 VDNDHELSSGNDKYPAPSTPQLRQGTRLLDDGDCQEQTNCSTGKESVHSDSCEIRGNQKK 241
Query: 221 PRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYL 280
+V W+ ELH+ FV AV QLGID+A+P RILELM V GLTR NVASHLQ+ + K ++
Sbjct: 242 IKVDWTPELHKTFVKAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRQILP 301
Query: 281 K 281
K
Sbjct: 302 K 302
>gi|125552240|gb|EAY97949.1| hypothetical protein OsI_19867 [Oryza sativa Indica Group]
Length = 315
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 94/143 (65%), Gaps = 1/143 (0%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
+G SS + +A + P G+RVL++D+ T L+I+ ++L C Y VT + A A+
Sbjct: 2 AGSCSVASSNKSKLADEEFSPVGMRVLLIDESTTYLKIITKLLLNCGYKVTPKTAARDAV 61
Query: 71 DILRERKGCFDVVLSDVHMP-DMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGA 129
+ L E +D+VL++VH P +DGF LL++ G +MDLPV++ SAD V++ + GA
Sbjct: 62 EELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDDKRTVLKCVNSGA 121
Query: 130 CDYLIKPIREEELKNIWQHVVRK 152
CDYL+KP+R EELKNIWQHV R+
Sbjct: 122 CDYLVKPLRHEELKNIWQHVYRR 144
>gi|297806747|ref|XP_002871257.1| hypothetical protein ARALYDRAFT_325337 [Arabidopsis lyrata subsp.
lyrata]
gi|297317094|gb|EFH47516.1| hypothetical protein ARALYDRAFT_325337 [Arabidopsis lyrata subsp.
lyrata]
Length = 625
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 144/297 (48%), Gaps = 60/297 (20%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLY--------NVTTCSQAAVALDILRERKGCFDVVLS 85
+ V+VVDDD L IL +ML R Y V AL L+ ++ D++++
Sbjct: 16 INVMVVDDDRVFLNILSRMLERSKYIDPSVMKITVVAVDDPKKALSTLKIQRDHIDLIIT 75
Query: 86 DVHMPDMDGFKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
D +MP M+G +L + I E +LPV++MS+D + + GA ++ KPI +L
Sbjct: 76 DYYMPSMNGLQLKKQITQEFGNLPVLVMSSDP--NKEQESLSCGAMGFIPKPIEPADLTK 133
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDH-----------------------HKRGSDEIEY 181
I+Q + + N S L E +H K+
Sbjct: 134 IYQFALTYKMN-----GKSTLLTEQNHKDANVSVPQQITLIPEQANVLKTKKKNCSSKSD 188
Query: 182 ASSVNE------GTEGTFKAQRKRISAKEEDDGE--LESDDPSTTKKPRVVWSVELHQQF 233
+ +VN T+G+ K ++++ + DDGE L+ KK ++ W+ LH F
Sbjct: 189 SRTVNSTNGSCVSTDGSRKNRKRKPNGGPSDDGESLLQP-----AKKKKITWTDSLHDLF 243
Query: 234 VSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
+ A+ +G+DKAVPK+IL MNV LTRENVASH LQK+R++L+R V+ QG
Sbjct: 244 LQAIRHIGLDKAVPKKILAFMNVSYLTRENVASH-----LQKYRIFLRR---VADQG 292
>gi|242093736|ref|XP_002437358.1| hypothetical protein SORBIDRAFT_10g025500 [Sorghum bicolor]
gi|241915581|gb|EER88725.1| hypothetical protein SORBIDRAFT_10g025500 [Sorghum bicolor]
Length = 581
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 100/166 (60%), Gaps = 17/166 (10%)
Query: 118 VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSD 177
+ + + I+HGAC Y++KP+R E +KNIW HVVRK + + N+ R +
Sbjct: 1 METMAKAIQHGACHYMVKPVRPEMVKNIWLHVVRKSKSNIRNKVNN----------RNDN 50
Query: 178 EIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELHQQFVSA 236
+ V++ + K RK +D DG + + ST KK RV W+ +LH +F+ A
Sbjct: 51 PSQIGQPVDDEKDDA-KHTRKHCKKNRKDGDGSEKDEVISTQKKQRVEWTRQLHSKFLEA 109
Query: 237 VNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR 282
+N +G+D AVPK+ILE+MNV G+T+ENVASH LQKFR+YLK+
Sbjct: 110 INHIGMDNAVPKKILEVMNVDGITKENVASH-----LQKFRMYLKK 150
>gi|449458817|ref|XP_004147143.1| PREDICTED: uncharacterized protein LOC101203501 [Cucumis sativus]
Length = 607
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 143/313 (45%), Gaps = 76/313 (24%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYN-----VTTCSQAAVALDILRERKGCFDVVL 84
F L VL+VD D L+ L +L + YN +TT A++AL +++E+ FD+V+
Sbjct: 15 FAKNLHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVM 74
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
++V MPDMD F L H+ L+M++ VI MS+ +S + + GAC +L KPI +LK
Sbjct: 75 ANVSMPDMDSFSFL-HVLLKMNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKY 133
Query: 145 IWQHVVRKRWN------------------------------------------------- 155
+WQHV R WN
Sbjct: 134 MWQHVYR--WNRNITKQTYKANCIETAKPRKESVGIQITDAVVLSRSAAAVSYNNNCCIN 191
Query: 156 ----ENKEHENSGSLEETDH-------HKRGSDEIEYASS---VNEGTEGTFKAQRKRIS 201
ENKE + S + D KR SD+IE S V +E T K RI
Sbjct: 192 YKPMENKEKDKSVQIGSHDSLVGSFFGGKRLSDDIEGISREKRVKYYSEPT-KFGFSRID 250
Query: 202 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 261
E E S T RVVW+ E ++F A+N+LG DK+ PK IL++MN P LT
Sbjct: 251 EDHERRKEYYIASDSRT---RVVWNAERRRKFTDALNKLG-DKSRPKLILKMMNEPCLTL 306
Query: 262 ENVASHLQEINLQ 274
VA+HLQ+ Q
Sbjct: 307 RQVANHLQKYKAQ 319
>gi|449503419|ref|XP_004161993.1| PREDICTED: uncharacterized protein LOC101230585 [Cucumis sativus]
Length = 557
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 143/313 (45%), Gaps = 76/313 (24%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYN-----VTTCSQAAVALDILRERKGCFDVVL 84
F L VL+VD D L+ L +L + YN +TT A++AL +++E+ FD+V+
Sbjct: 15 FAKNLHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVM 74
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
++V MPDMD F L H+ L+M++ VI MS+ +S + + GAC +L KPI +LK
Sbjct: 75 ANVSMPDMDSFSFL-HVLLKMNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKY 133
Query: 145 IWQHVVRKRWN------------------------------------------------- 155
+WQHV R WN
Sbjct: 134 MWQHVYR--WNRNITKQTYKANCIETAKPRKESVGIQITDAVVLSRSAAAVSYNNNCCIN 191
Query: 156 ----ENKEHENSGSLEETDH-------HKRGSDEIEYASS---VNEGTEGTFKAQRKRIS 201
ENKE + S + D KR SD+IE S V +E T K RI
Sbjct: 192 YKPMENKEKDKSVQIGSHDSLVGSFFGGKRLSDDIEGISREKRVKYYSEPT-KFGFSRID 250
Query: 202 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 261
E E S T RVVW+ E ++F A+N+LG DK+ PK IL++MN P LT
Sbjct: 251 EDHERRKEYYIASDSRT---RVVWNAERRRKFTDALNKLG-DKSRPKLILKMMNEPCLTL 306
Query: 262 ENVASHLQEINLQ 274
VA+HLQ+ Q
Sbjct: 307 RQVANHLQKYKAQ 319
>gi|48210044|gb|AAT40543.1| Putative two-component response regulator protein, identical
[Solanum demissum]
Length = 352
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 130/254 (51%), Gaps = 50/254 (19%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ +LVV+DD T L ++ +L++C Y V T AL LR + FD+V++DVH D++
Sbjct: 15 ISILVVNDDATYLPVVAGLLKKCNYQVVTVKYPIDALSKLRIKGDSFDLVVTDVHKSDIN 74
Query: 94 GFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
GF+L + I ++PV++MSAD + +++G++ + D
Sbjct: 75 GFELQQVITQAFEIPVLLMSADDKEGTILKGLKGVSVD---------------------- 112
Query: 154 WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESD 213
+ ++ +L+ KRG + S++ G +G D +
Sbjct: 113 --DQRDQGPCTALQV----KRGKKPVPGKSAMKLGKQGK--------------DNSVNFV 152
Query: 214 DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINL 273
P+ K +++W+ LH F+ A++ +G DKAVPK+I E M VPGL+RENVASH
Sbjct: 153 LPT---KSQIIWTDSLHNTFLEAISNIGFDKAVPKKIHEHMKVPGLSRENVASH-----W 204
Query: 274 QKFRLYLKRLNGVS 287
QK+R+YL+R+ S
Sbjct: 205 QKYRIYLRRVTDAS 218
>gi|15222067|ref|NP_175345.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194281|gb|AEE32402.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 608
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 83/125 (66%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
QFP VLVVD + T L ++Q++++ Y V+ + A AL L K ++V+ D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MP +DG + L+ I ++DLPV++MS D + +VM+ +GACDY++KP++EE + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 149 VVRKR 153
+VRKR
Sbjct: 149 IVRKR 153
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE--INLQK 275
+KPR+ W+ ELHQ+F+ A+ +G + V L+ M + G+TR NVASHLQ+ INL++
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGANPKVLVECLQEMRIEGITRSNVASHLQKHRINLEE 477
>gi|212275528|ref|NP_001130318.1| uncharacterized protein LOC100191412 [Zea mays]
gi|194688832|gb|ACF78500.1| unknown [Zea mays]
Length = 471
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 71/87 (81%), Gaps = 6/87 (6%)
Query: 211 ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 270
E D+PS KKPRVVWS+ELH++FV+AVNQLGIDKAVPKRILELMNV LTRENVASH
Sbjct: 16 EGDEPSAAKKPRVVWSIELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASH--- 72
Query: 271 INLQKFRLYLKRLNGV-SQQGGITNSF 296
LQK+RLYLKRL+ V SQQ I +F
Sbjct: 73 --LQKYRLYLKRLSAVASQQASIVAAF 97
>gi|7770351|gb|AAF69721.1|AC016041_26 F27J15.4 [Arabidopsis thaliana]
Length = 612
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 83/125 (66%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
QFP VLVVD + T L ++Q++++ Y V+ + A AL L K ++V+ D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MP +DG + L+ I ++DLPV++MS D + +VM+ +GACDY++KP++EE + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 149 VVRKR 153
+VRKR
Sbjct: 149 IVRKR 153
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 6/63 (9%)
Query: 219 KKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILEL---MNVPGLTRENVASHLQE--IN 272
+KPR+ W+ ELHQ+F+ A+ + GI+KA PK ++E M + G+TR NVASHLQ+ IN
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRIN 478
Query: 273 LQK 275
L++
Sbjct: 479 LEE 481
>gi|334183176|ref|NP_001185179.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194282|gb|AEE32403.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 622
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 83/125 (66%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
QFP VLVVD + T L ++Q++++ Y V+ + A AL L K ++V+ D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MP +DG + L+ I ++DLPV++MS D + +VM+ +GACDY++KP++EE + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 149 VVRKR 153
+VRKR
Sbjct: 149 IVRKR 153
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILEL---MNVPGLTRENVASHLQ 269
+KPR+ W+ ELHQ+F+ A+ + GI+KA PK ++E M + G+TR NVASHLQ
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQ 473
>gi|297847198|ref|XP_002891480.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
gi|297337322|gb|EFH67739.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
Length = 530
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 83/124 (66%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
QFP VLVVD + T L ++Q++++ Y VT + A AL L K ++V+ D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVTIETDAEKALAYLTSCKHEINIVIWDFH 88
Query: 89 MPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
MP +DG + L+ IG +MDLPV++MS D + +VM+ +GACDY++KP++EE + NIWQH
Sbjct: 89 MPGIDGLQALKSIGSKMDLPVVIMSDDNQTESVMKATINGACDYVVKPVKEEVIANIWQH 148
Query: 149 VVRK 152
+VRK
Sbjct: 149 IVRK 152
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 11/95 (11%)
Query: 211 ESDDPSTTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILEL---MNVPGLTRENVAS 266
E + +KPR+ W+ +LHQ+F+ A+ + GI+KA PK +L+ M V G+TR NVAS
Sbjct: 325 EKKEAKKPRKPRMTWTEDLHQKFLEAIEIVGGIEKANPKVLLDCLLEMKVEGITRSNVAS 384
Query: 267 HLQE--INLQKFRLYLKRLNGVSQQGGITNSFCAP 299
HLQ+ INL++ ++ +Q+ G + ++ P
Sbjct: 385 HLQKHRINLEE-----NQIPEETQEDGWSTAYNRP 414
>gi|414865597|tpg|DAA44154.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 114
Score = 124 bits (311), Expect = 2e-25, Method: Composition-based stats.
Identities = 58/94 (61%), Positives = 71/94 (75%), Gaps = 6/94 (6%)
Query: 17 GSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRER 76
+R AD FP G++VLVVDDD TCL +L++ML C Y+VTTC QA AL +LRE
Sbjct: 4 AEARGAD------FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLREN 57
Query: 77 KGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI 110
+ FDV++SDVHMPDMDGF+LLE +GLEMDLPVI
Sbjct: 58 RRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVI 91
>gi|15225844|ref|NP_180275.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
gi|3885337|gb|AAC77865.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330252838|gb|AEC07932.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
Length = 575
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 136/278 (48%), Gaps = 38/278 (13%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLY---NVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
+ V+VVDD+ L I +ML + Y V AL L+ ++ D++++D +MP
Sbjct: 16 INVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMP 75
Query: 91 DMDGFKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
M+G +L + I E +L V++MS+D + GA ++ KPI +L I+Q
Sbjct: 76 GMNGLQLKKQITQEFGNLSVLVMSSDPNKEE--ESLSCGAMGFIPKPIAPTDLPKIYQFA 133
Query: 150 VRKRWN--------ENKEHENSGSLEET----------DHHKRGSDEIEYASSVNE---- 187
+ + N +N++ N ++ K+ +VN
Sbjct: 134 LTYKRNGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTNVS 193
Query: 188 --GTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 245
T G+ K ++++ DDGE S P KK ++ W+ L F+ A+ +G DK
Sbjct: 194 HVSTNGSRKNRKRKPKGGPSDDGESLSQPP---KKKKIWWTNPLQDLFLQAIQHIGYDKV 250
Query: 246 VPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 283
VPK+IL +MNVP LTRENVASH LQK+RL++KR+
Sbjct: 251 VPKKILAIMNVPYLTRENVASH-----LQKYRLFVKRV 283
>gi|50400707|sp|Q9ZVD3.2|ARR13_ARATH RecName: Full=Putative two-component response regulator ARR13
Length = 572
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 136/278 (48%), Gaps = 38/278 (13%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLY---NVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
+ V+VVDD+ L I +ML + Y V AL L+ ++ D++++D +MP
Sbjct: 16 INVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMP 75
Query: 91 DMDGFKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
M+G +L + I E +L V++MS+D + GA ++ KPI +L I+Q
Sbjct: 76 GMNGLQLKKQITQEFGNLSVLVMSSDPNKEE--ESLSCGAMGFIPKPIAPTDLPKIYQFA 133
Query: 150 VRKRWN--------ENKEHENSGSLEET----------DHHKRGSDEIEYASSVNE---- 187
+ + N +N++ N ++ K+ +VN
Sbjct: 134 LTYKRNGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTNVS 193
Query: 188 --GTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 245
T G+ K ++++ DDGE S P KK ++ W+ L F+ A+ +G DK
Sbjct: 194 HVSTNGSRKNRKRKPKGGPSDDGESLSQPP---KKKKIWWTNPLQDLFLQAIQHIGYDKV 250
Query: 246 VPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 283
VPK+IL +MNVP LTRENVASH LQK+RL++KR+
Sbjct: 251 VPKKILAIMNVPYLTRENVASH-----LQKYRLFVKRV 283
>gi|388458730|gb|AFK31231.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 111/194 (57%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D +K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLRKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G+T S A
Sbjct: 170 PTTSKHGVTLSSTA 183
>gi|388458722|gb|AFK31227.1| Ehd1, partial [Oryza officinalis]
gi|388458744|gb|AFK31238.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++++ TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458674|gb|AFK31203.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458712|gb|AFK31222.1| Ehd1, partial [Oryza nivara]
gi|388458718|gb|AFK31225.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++++ TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458740|gb|AFK31236.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPSH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D +K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLRKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458692|gb|AFK31212.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 16/193 (8%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKRGSDEIEYASSVNEGTEGT-FKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVW 225
+ A + T T +A + + DD GE+ D K R+ W
Sbjct: 61 ---PPSILAMARATPATTRSTAIEASLAPLENEVRDDMVNYNGEIT--DIRNLGKSRLTW 115
Query: 226 SVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNG 285
+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 116 TTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIP 170
Query: 286 VSQQGGITNSFCA 298
+ + G+T S A
Sbjct: 171 TTSKHGVTLSSTA 183
>gi|388458626|gb|AFK31179.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458628|gb|AFK31180.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458634|gb|AFK31183.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458636|gb|AFK31184.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458640|gb|AFK31186.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458662|gb|AFK31197.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458666|gb|AFK31199.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458684|gb|AFK31208.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458696|gb|AFK31214.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458700|gb|AFK31216.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458702|gb|AFK31217.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458704|gb|AFK31218.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458706|gb|AFK31219.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458756|gb|AFK31244.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458758|gb|AFK31245.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458760|gb|AFK31246.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G+T S A
Sbjct: 170 PTTSKHGVTLSSTA 183
>gi|388458622|gb|AFK31177.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G+T S A
Sbjct: 170 PTTSKHGVTLSSTA 183
>gi|388458720|gb|AFK31226.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++++ TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEV----RDDMVNYNGEIM--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458710|gb|AFK31221.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGGDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G+T S A
Sbjct: 170 PTTSKHGVTLSSTA 183
>gi|388458742|gb|AFK31237.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++++ TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRVQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458698|gb|AFK31215.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 110/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 --HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSMLAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKA+PK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAIPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G+T S A
Sbjct: 170 PTTSKHGVTLSSTA 183
>gi|388458688|gb|AFK31210.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G+T S A
Sbjct: 170 LTTSKHGVTLSSTA 183
>gi|388458752|gb|AFK31242.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ G+T S A
Sbjct: 170 PTTSNHGVTLSSTA 183
>gi|218184693|gb|EEC67120.1| hypothetical protein OsI_33927 [Oryza sativa Indica Group]
gi|388458618|gb|AFK31175.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 110/192 (57%), Gaps = 19/192 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 --HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSTLAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR-L 283
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 284 NGVSQQGGITNS 295
S+QG +S
Sbjct: 170 PTTSKQGATLSS 181
>gi|388458716|gb|AFK31224.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 111/194 (57%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++++ TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN+LG DKAVPK++L +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNRLGEDKAVPKKMLGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|303287506|ref|XP_003063042.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
gi|226455678|gb|EEH52981.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
Length = 544
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 74/100 (74%), Gaps = 6/100 (6%)
Query: 211 ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 270
++DD S KKPRVVWS ELHQQFV+AVNQLGIDKAVPKRIL+LM V GLTRENVASH
Sbjct: 233 DNDDTSGLKKPRVVWSPELHQQFVTAVNQLGIDKAVPKRILDLMGVQGLTRENVASH--- 289
Query: 271 INLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLG 310
LQK+RLYLKRL GV+ G + S A T + + +G
Sbjct: 290 --LQKYRLYLKRLQGVNNNGTVP-SGAAGFMTGLAIDGVG 326
>gi|388458714|gb|AFK31223.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++++ TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKAKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458694|gb|AFK31213.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 110/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD G++ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGQIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G+T S A
Sbjct: 170 PTTSKHGVTLSSTA 183
>gi|388458732|gb|AFK31232.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458680|gb|AFK31206.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSAA 183
>gi|388458608|gb|AFK31170.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNSMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458630|gb|AFK31181.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN L DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLAEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G+T S A
Sbjct: 170 PTTSKHGVTLSSTA 183
>gi|388458612|gb|AFK31172.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458614|gb|AFK31173.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458654|gb|AFK31193.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458660|gb|AFK31196.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458668|gb|AFK31200.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458670|gb|AFK31201.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458676|gb|AFK31204.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458678|gb|AFK31205.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458682|gb|AFK31207.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458690|gb|AFK31211.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458726|gb|AFK31229.1| Ehd1, partial [Oryza rufipogon]
gi|388458746|gb|AFK31239.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458754|gb|AFK31243.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458632|gb|AFK31182.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|22758332|gb|AAN05536.1| putative response regulator protein [Oryza sativa Japonica Group]
gi|222612965|gb|EEE51097.1| hypothetical protein OsJ_31808 [Oryza sativa Japonica Group]
gi|388458638|gb|AFK31185.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458708|gb|AFK31220.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458724|gb|AFK31228.1| Ehd1, partial [Oryza rufipogon]
gi|388458728|gb|AFK31230.1| Ehd1, partial [Oryza rufipogon]
gi|388458736|gb|AFK31234.1| Ehd1, partial [Oryza rufipogon]
gi|388458750|gb|AFK31241.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458748|gb|AFK31240.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 111/198 (56%), Gaps = 26/198 (13%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 ------HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKK 220
R + A++ + TE + + DD GE+ D K
Sbjct: 61 PPSILSMARATP----ATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGK 110
Query: 221 PRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYL 280
R+ W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ L
Sbjct: 111 SRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQL 165
Query: 281 KRLNGVSQQGGITNSFCA 298
K+ + + G T S A
Sbjct: 166 KKSIPTTSKHGATLSSTA 183
>gi|388458686|gb|AFK31209.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EE NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEEPSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G+T S A
Sbjct: 170 PTTSKHGVTLSSTA 183
>gi|110289209|gb|AAP54164.2| myb-like DNA-binding domain, SHAQKYF class family protein [Oryza
sativa Japonica Group]
Length = 256
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 15/194 (7%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ +++ K+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ-VHI-KYRMQLKKSI 172
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 173 PTTSKHGATLSSTA 186
>gi|226875201|gb|ACO88948.1| cytokinin B-type response regulator 5 [Vitis vinifera]
Length = 81
Score = 119 bits (297), Expect = 7e-24, Method: Composition-based stats.
Identities = 55/81 (67%), Positives = 66/81 (81%)
Query: 42 DITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI 101
D T L+ILE+ML++CLY VT C A AL++LRERK +D+V+SDV+MPDMDGFKLLE +
Sbjct: 1 DPTWLKILEKMLKKCLYEVTICGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLELV 60
Query: 102 GLEMDLPVIMMSADGRVSAVM 122
GLEMDLPVIMMS DG S VM
Sbjct: 61 GLEMDLPVIMMSVDGETSRVM 81
>gi|388458738|gb|AFK31235.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ +++ + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHENNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458658|gb|AFK31195.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ R++ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFREQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458672|gb|AFK31202.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ R + ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRTQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458656|gb|AFK31194.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ +K+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFQKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458734|gb|AFK31233.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL ++ V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIIKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|326522516|dbj|BAK07720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 119/256 (46%), Gaps = 39/256 (15%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD--VHMP 90
GL+VL VDDD LR L Q LRRC Y VT A AL L + FD V++
Sbjct: 20 GLKVLAVDDDPVYLRTLTQTLRRCGYEVTAKPSPAEALKELEKNPDGFDFVMTAALTRGR 79
Query: 91 DMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
MDGF LL IG + VI+ S + + RG + GAC KP+R+ ++ IWQHV+
Sbjct: 80 GMDGFDLLNRIGERYPV-VILFSGEESMETRRRGTQGGACYLAEKPMRDTQIYMIWQHVL 138
Query: 151 RKRWNEN----------KEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 200
R R + G LE+T KRG VN+ +G
Sbjct: 139 RWRRENAAGVVAANANPRPSSEGGHLEDTP-RKRG-------RGVNDSGKG--------- 181
Query: 201 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL---GIDKAVPKRILELMNVP 257
K DG +TTKK + W+ E+H+ FVSAV QL G D P I E + V
Sbjct: 182 --KGASDGGGVQPVTNTTKKKKFEWTSEMHELFVSAVTQLKETGGD--TPNNIREFLEVD 237
Query: 258 G--LTRENVASHLQEI 271
G LT V+SHLQ+
Sbjct: 238 GIYLTTTQVSSHLQKY 253
>gi|388458610|gb|AFK31171.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
+ A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILATARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTAQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|326530738|dbj|BAK01167.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 64/74 (86%), Gaps = 5/74 (6%)
Query: 213 DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEIN 272
DD S +KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILELMNV LTRENVASH
Sbjct: 24 DDASASKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASH----- 78
Query: 273 LQKFRLYLKRLNGV 286
LQK+RLYL+RL+ V
Sbjct: 79 LQKYRLYLRRLSAV 92
>gi|345286269|gb|AEN79457.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 117 bits (293), Expect = 2e-23, Method: Composition-based stats.
Identities = 64/161 (39%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVE 228
A++++ TE + + + +GE+ D K R+ W+ +
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 229 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|388458664|gb|AFK31198.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R E L NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEGLSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458620|gb|AFK31176.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 108/194 (55%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKA PK++L +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAAPKKMLGVMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|345286297|gb|AEN79471.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 116 bits (291), Expect = 3e-23, Method: Composition-based stats.
Identities = 64/161 (39%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVE 228
A++ + TE + + + +GE+ D +K R+ W+ +
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEIT--DIRNLRKSRLTWTTQ 118
Query: 229 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|388458616|gb|AFK31174.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+ EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVGIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458642|gb|AFK31187.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458646|gb|AFK31189.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458648|gb|AFK31190.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458650|gb|AFK31191.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458652|gb|AFK31192.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN L DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458644|gb|AFK31188.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN L DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458624|gb|AFK31178.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NI QH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIRQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 285 GVSQQGGITNSFCA 298
+ + G+T S A
Sbjct: 170 PTTSKHGVTLSSTA 183
>gi|413935897|gb|AFW70448.1| putative two-component response regulator family protein [Zea mays]
Length = 545
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 79/106 (74%), Gaps = 8/106 (7%)
Query: 211 ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 270
E+ D S+ KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV +TRENVASH
Sbjct: 116 ENGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVASH--- 172
Query: 271 INLQKFRLYLKRLNG-VSQQGGITNSFCA--PIETNVKLGSLGRFD 313
LQK+RLYLKRL+ S+Q +T +F P N+ L + +++
Sbjct: 173 --LQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNMGLDAFRQYN 216
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYN 59
DQFP G+RVL VDDD TCL+ILE +L RC Y+
Sbjct: 20 DQFPVGMRVLAVDDDPTCLKILENLLLRCQYH 51
>gi|345286299|gb|AEN79472.1| B-type response regulator, partial [Oryza barthii]
Length = 159
Score = 115 bits (289), Expect = 5e-23, Method: Composition-based stats.
Identities = 64/161 (39%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVE 228
A++ + TE + + +GE+ D +K R+ W+ +
Sbjct: 61 PPSILAMARATPATTKSTATEALLAPLENEVRDDMVNYNGEIT--DIRDLRKSRLTWTTQ 118
Query: 229 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 83/124 (66%), Gaps = 4/124 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VLVVDD+ C + Q+LR+C Y VTTC A A+++LR R F+++L+DV MPD+D
Sbjct: 51 IHVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELLR-RGTEFNLLLTDVMMPDID 109
Query: 94 GFKLLEHIGLEMD---LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G KLL+H+ LPVIMMSA+ V +R GA DYL+KP+ +++K +WQHV
Sbjct: 110 GPKLLQHVRHHSQFSQLPVIMMSANQHSEIVFECVRSGADDYLLKPVTVKQVKLLWQHVW 169
Query: 151 RKRW 154
RK++
Sbjct: 170 RKQY 173
>gi|345286281|gb|AEN79463.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVE 228
A++ + TE + + + +GE+ D K R+ W+ +
Sbjct: 61 PPSILAMARATPATTRSTATEASLSPLENEVRYDMVNYNGEI--TDIRDLGKSRLTWTTQ 118
Query: 229 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286275|gb|AEN79460.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286279|gb|AEN79462.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286287|gb|AEN79466.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286289|gb|AEN79467.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286291|gb|AEN79468.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286293|gb|AEN79469.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 115 bits (288), Expect = 7e-23, Method: Composition-based stats.
Identities = 64/161 (39%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVE 228
A++ + TE + + + +GE+ D K R+ W+ +
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRYDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 229 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286261|gb|AEN79453.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286295|gb|AEN79470.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 115 bits (287), Expect = 1e-22, Method: Composition-based stats.
Identities = 64/161 (39%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVE 228
A++ + TE + + + +GE+ D K R+ W+ +
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 229 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286277|gb|AEN79461.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 115 bits (287), Expect = 1e-22, Method: Composition-based stats.
Identities = 63/161 (39%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVE 228
A++ + TE + + + +G++ D +K R+ W+ +
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGKIT--DIRDLRKSRLTWTTQ 118
Query: 229 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286259|gb|AEN79452.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286265|gb|AEN79455.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286273|gb|AEN79459.1| B-type response regulator, partial [Oryza sativa]
gi|345286285|gb|AEN79465.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 115 bits (287), Expect = 1e-22, Method: Composition-based stats.
Identities = 64/161 (39%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVE 228
A++ + TE + + + +GE+ D K R+ W+ +
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 229 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286263|gb|AEN79454.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
Length = 159
Score = 115 bits (287), Expect = 1e-22, Method: Composition-based stats.
Identities = 64/161 (39%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 --HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVE 228
A++ + TE + + + +GE+ D K R+ W+ +
Sbjct: 61 PPSTLAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 229 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|255570679|ref|XP_002526294.1| hypothetical protein RCOM_0577360 [Ricinus communis]
gi|223534375|gb|EEF36083.1| hypothetical protein RCOM_0577360 [Ricinus communis]
Length = 549
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 128/265 (48%), Gaps = 59/265 (22%)
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACD 131
+++E+KG F + +++ +MPDMD +LL H L+ D+PVI++S++ V A + I GA
Sbjct: 1 MVQEQKGRFKLAMANANMPDMDSLELL-HALLDKDIPVILISSETSVFAARKAIAEGASF 59
Query: 132 YLIKPIREEELKNIWQHVVRKRWN-----------------------------EN--KEH 160
L +PI ++L+ +WQH R R N EN KE
Sbjct: 60 ILHEPISIDDLRYVWQHAYRNRRNAADQTQNETCQEKENGSNISQYPVIQETTENACKED 119
Query: 161 ENSGSLEET-----------------DHHKRGSDEIEYASSVNEGTEGTFKAQR-KRISA 202
E G+ +ET +H S+E + + E + QR KR+
Sbjct: 120 EVEGNAKETYALIEKDCSKTLENTITEHSMTDSNEKQGVEKIKRRNEVRHEEQREKRVKI 179
Query: 203 KEEDDGE---------LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILEL 253
E++ + S+ ++ RV+W+ ELH +F +A++ LG KA PK ILE+
Sbjct: 180 IFEEENHKWKKTIIEEEIEEKSSSDRRSRVLWTPELHLKFTAAISALGDKKARPKPILEM 239
Query: 254 MNVPGLTRENVASHLQEINLQKFRL 278
MNVP LT+ VASHLQ+ Q R+
Sbjct: 240 MNVPHLTQRQVASHLQKYKSQVRRI 264
>gi|345286267|gb|AEN79456.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 94/165 (56%), Gaps = 13/165 (7%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 224
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 225 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
W+ +LH+QF++AVN LG DKAVPK IL +M V LTRE VA HLQ
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKNILGIMKVKHLTREQVACHLQ 159
>gi|345286271|gb|AEN79458.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 112 bits (279), Expect = 9e-22, Method: Composition-based stats.
Identities = 63/161 (39%), Positives = 95/161 (59%), Gaps = 5/161 (3%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVE 228
A++ + TE + + + +GE+ D K R+ W+ +
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 229 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
LH+QF++AVN L DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 119 LHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|449456441|ref|XP_004145958.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
SG+G + +P LRVL+V+ D + +I+ +LR+C Y V A +IL
Sbjct: 44 SGFGIGIKWERFLPKMM---LRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEIL 100
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHI-GLEM--DLPVIMMSADGRVSAVMRGIRHGAC 130
+ER D++L++V +P + GF LL I G E ++PVIMMS++ +S V + + GA
Sbjct: 101 KERPRNVDLILAEVELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAA 160
Query: 131 DYLIKPIREEELKNIWQHVVRKRWNEN 157
DYL+KP+R EL+N+WQHV R++ + N
Sbjct: 161 DYLVKPLRRNELRNLWQHVWRRQASSN 187
>gi|449497396|ref|XP_004160390.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
SG+G + +P LRVL+V+ D + +I+ +LR+C Y V A +IL
Sbjct: 44 SGFGIGIKWERFLPKMM---LRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEIL 100
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHI-GLEM--DLPVIMMSADGRVSAVMRGIRHGAC 130
+ER D++L++V +P + GF LL I G E ++PVIMMS++ +S V + + GA
Sbjct: 101 KERPRNVDLILAEVELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAA 160
Query: 131 DYLIKPIREEELKNIWQHVVRKRWNEN 157
DYL+KP+R EL+N+WQHV R++ + N
Sbjct: 161 DYLVKPLRRNELRNLWQHVWRRQASSN 187
>gi|84570633|dbj|BAE72701.1| pseudo-response regulator 59 homologue [Lemna gibba]
Length = 496
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 81/122 (66%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + I+ +LR+C Y+V + + A DI++E+ FD++LS+V +P
Sbjct: 57 LRVLLVEPDDSTRHIVTALLRKCSYHVASVADGIKAWDIVKEKNFNFDIILSEVEVPSFS 116
Query: 94 GFKLLEHI-GLEMD--LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I G E+ +PVIMMS+ VS V + ++ GA D+L+KP+R+ EL+N+WQHV
Sbjct: 117 GISLLTKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRNLWQHVW 176
Query: 151 RK 152
R+
Sbjct: 177 RR 178
>gi|18407171|ref|NP_566085.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|52783231|sp|Q8L500.2|APRR9_ARATH RecName: Full=Two-component response regulator-like APRR9; AltName:
Full=Pseudo-response regulator 9
gi|9247022|gb|AAF86253.1|AF272040_1 timing of CAB expression 1-like protein [Arabidopsis thaliana]
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
gi|62320652|dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|330255660|gb|AEC10754.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 468
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 91/149 (61%), Gaps = 5/149 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V S A ++L+E+ D++L+++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 94 GFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL EH + ++PVIMMS+ + V++ + GA DYLIKP+R+ ELKN+WQHV
Sbjct: 97 GFALLALVMEHEACK-NIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDE 178
R+ + ++ SL + H+ +DE
Sbjct: 156 WRRLTLRDDPTAHAQSLPASQHNLEDTDE 184
>gi|413943652|gb|AFW76301.1| hypothetical protein ZEAMMB73_695347 [Zea mays]
Length = 106
Score = 110 bits (275), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/84 (64%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK---GCFDVVLSD 86
FPAGLRVLVVDDD CL++LE+ L+ C YNV + A AL++LRERK FD+V+SD
Sbjct: 6 FPAGLRVLVVDDDRVCLKVLERQLKCCNYNVMVVTDARTALEMLRERKDDGDQFDLVISD 65
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVI 110
V MP+MDGF+LLE IG+EMDLPVI
Sbjct: 66 VVMPNMDGFELLELIGVEMDLPVI 89
>gi|345286283|gb|AEN79464.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 96/163 (58%), Gaps = 9/163 (5%)
Query: 112 MSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 172 HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWS 226
S ++ T +A + + DD GE+ D K R+ W+
Sbjct: 61 --PPSILAMARATPATTRSTTTEASLAPLENEVRDDMVNYNGEIT--DIRDLGKSRLTWT 116
Query: 227 VELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 269
+LH+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 95/156 (60%), Gaps = 7/156 (4%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
PA + VL+VDDD C ++ ML++C Y VTT S A+ +L ER F+++L+DV MP
Sbjct: 6 PADVHVLLVDDDRVCRTLVAGMLKKCNYQVTTASSGEEAMALL-ERGTQFNLLLTDVMMP 64
Query: 91 DMDGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
D+DG LL ++ ++PV+MMS++ VM IR GA DYL+KP+ ++ +K++W
Sbjct: 65 DVDGPTLLHYVRNNPFYQEMPVVMMSSNEHADTVMNCIRLGAEDYLLKPVTKKAVKHMWA 124
Query: 148 HVVRK--RWNENKEHENSGSLEETDHHKR-GSDEIE 180
HV R+ R+ + EN + E D+ G+ E+E
Sbjct: 125 HVWRRKQRYQMVPQFENGHEVVEDDYAAGIGAHELE 160
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 79/122 (64%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +++ +LR+C Y V + A ++RER FD+VL++V MP +
Sbjct: 44 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWGVMRERAYAFDLVLTEVTMPTLS 103
Query: 94 GFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G +LL I ++PVIMMS+ + V+R ++ GA D+L+KP+R+ EL+N+WQHV
Sbjct: 104 GIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPVRKNELRNLWQHVW 163
Query: 151 RK 152
R+
Sbjct: 164 RR 165
>gi|297824763|ref|XP_002880264.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
gi|297326103|gb|EFH56523.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 91/149 (61%), Gaps = 5/149 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V S A ++L+E+ D++L+++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 94 GFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL EH + ++PVIMMS+ + V++ + GA DYLIKP+R+ ELKN+WQHV
Sbjct: 97 GFALLALVMEHEACK-NIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDE 178
R+ + ++ SL + H+ +DE
Sbjct: 156 WRRLTLRDDPTAHAQSLPGSQHNLEDTDE 184
>gi|308913674|gb|ADO51647.1| PRR59 [Zea mays]
Length = 695
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 79/122 (64%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V + A +++RER FD+VL++V MP +
Sbjct: 53 LRVLLVEHDDSTRQIVTALLRKCGYRVAAVADGMKAWEVMRERAYDFDLVLTEVAMPSLS 112
Query: 94 GFKLLEHIGLEMD---LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G +LL I + +PVIMMS+ + V++ ++ GA D+L+KP+R+ EL N+WQHV
Sbjct: 113 GIQLLSRIAAAAECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELGNLWQHVW 172
Query: 151 RK 152
R+
Sbjct: 173 RR 174
>gi|84570627|dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D I+ +LR+C Y+V + A DI+ E+ FD++LS+V +P
Sbjct: 73 LRVLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAWDIVEEKNFNFDIILSEVEVPSFS 132
Query: 94 GFKLLEHI-GLEMD--LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I G E+ +PVIMMS+ VS V + ++ GA D+L+KP+R+ EL+N+WQHV
Sbjct: 133 GINLLSKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRNLWQHVW 192
Query: 151 RK 152
R+
Sbjct: 193 RR 194
>gi|357157434|ref|XP_003577797.1| PREDICTED: two-component response regulator-like PRR95-like,
partial [Brachypodium distachyon]
Length = 681
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 79/122 (64%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +++ +LR+C Y V + A +++R R FD+VL++V MP +
Sbjct: 18 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVDMPTLS 77
Query: 94 GFKLLEHIGLEMD---LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + +PVIMMS+ + V+R +++GA D+L+KP+R+ EL+N+WQHV
Sbjct: 78 GIDLLARIVAAHECKNIPVIMMSSQDSIGTVLRCMQNGAVDFLVKPVRKNELRNLWQHVW 137
Query: 151 RK 152
R+
Sbjct: 138 RR 139
>gi|115480333|ref|NP_001063760.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|68565887|sp|Q689G6.1|PRR95_ORYSJ RecName: Full=Two-component response regulator-like PRR95; AltName:
Full=Pseudo-response regulator 95; Short=OsPRR95
gi|51571881|dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa Japonica Group]
gi|52075943|dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|52077226|dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|113631993|dbj|BAF25674.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|215695172|dbj|BAG90363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695375|dbj|BAG90566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641971|gb|EEE70103.1| hypothetical protein OsJ_30112 [Oryza sativa Japonica Group]
Length = 623
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 80/124 (64%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+ + D + I+ +LR+C Y V S A DIL+E+ D+VL++V +P M
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 102
Query: 94 GFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL I +E D +PVIMMS++ VS V + + GA D+L+KPIR+ EL+N+WQHV
Sbjct: 103 GFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 150 VRKR 153
RK+
Sbjct: 162 WRKQ 165
>gi|218202508|gb|EEC84935.1| hypothetical protein OsI_32150 [Oryza sativa Indica Group]
Length = 623
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 80/124 (64%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+ + D + I+ +LR+C Y V S A DIL+E+ D+VL++V +P M
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 102
Query: 94 GFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL I +E D +PVIMMS++ VS V + + GA D+L+KPIR+ EL+N+WQHV
Sbjct: 103 GFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 150 VRKR 153
RK+
Sbjct: 162 WRKQ 165
>gi|226497556|ref|NP_001141486.1| uncharacterized protein LOC100273598 [Zea mays]
gi|194704770|gb|ACF86469.1| unknown [Zea mays]
gi|414886440|tpg|DAA62454.1| TPA: hypothetical protein ZEAMMB73_402220 [Zea mays]
Length = 629
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+ + D + ++ +LR+C Y V S A D+L+E+ D+VL++V +P M
Sbjct: 43 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDLLKEKSFNVDLVLTEVELPLMS 102
Query: 94 GFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL I +E D +PVIMMS+ VS V + + GA D+L+KPIR+ EL+N+WQHV
Sbjct: 103 GFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 150 VRKR 153
RK+
Sbjct: 162 WRKQ 165
>gi|384252785|gb|EIE26260.1| hypothetical protein COCSUDRAFT_64410 [Coccomyxa subellipsoidea
C-169]
Length = 428
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 98/179 (54%), Gaps = 10/179 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRER-KGCFDVVLSDVHMPDMDG 94
VL+ +DD LRI+EQ+L++C Y VT ALDIL+ K CFD++L+D+ MP +DG
Sbjct: 15 VLLAEDDDLTLRIVEQLLKQCNYRVTVARNGQEALDILQHNDKHCFDLILTDIMMPKVDG 74
Query: 95 FKLLEHIG---LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 151
L+ + + LPVI+MS++ A+ + GA DYLIKPIR+ E+ +W H+ R
Sbjct: 75 MDLVCEVNQRKVWSHLPVIVMSSEQSQEAICKAFTVGAADYLIKPIRKNEVATLWHHIWR 134
Query: 152 KRW---NENKEHENSGSLEETDHHK-RGSDEIEYASSVNEGTEGTFK--AQRKRISAKE 204
K EN E +G + H + ++ AS + GT + AQR + K+
Sbjct: 135 KVMAAGTENLEGHAAGWISAKYRHDVLSAASLDAASIPQQCATGTAECDAQRAALPPKK 193
>gi|326518812|dbj|BAJ92567.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 687
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 80/122 (65%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +++ +LR+C Y V + A +++R R FD+VL++V+MP +
Sbjct: 38 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVNMPTLS 97
Query: 94 GFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I ++PVIMMS+ + V++ +++GA D+L+KP+R+ EL+N+WQHV
Sbjct: 98 GIDLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQNGAVDFLVKPVRKNELRNLWQHVW 157
Query: 151 RK 152
R+
Sbjct: 158 RR 159
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+ + D + ++ +LR+C Y+V S A +IL+E+ D+VL++V +P M
Sbjct: 39 VRVLLAEGDDSTRHVISALLRKCGYHVAAASDGVKAWEILKEKSFNIDLVLTEVELPAMS 98
Query: 94 GFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL EH + ++PVIMMS++ VS V + + GA D+L+KPIR+ EL+N+WQHV
Sbjct: 99 GFLLLSTIMEHEACK-NIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 157
Query: 150 VRKR 153
RK+
Sbjct: 158 WRKQ 161
>gi|302143985|emb|CBI23090.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A ++L+ R D++L++V +P +
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSIS 99
Query: 94 GFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL EH + ++PVIMMS+ G ++ V + + GA D+L+KP+R ELKN+WQHV
Sbjct: 100 GFALLTLVMEH-EICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHV 158
Query: 150 VRKR 153
R++
Sbjct: 159 WRRQ 162
>gi|226499102|ref|NP_001151536.1| two-component response regulator-like PRR95 [Zea mays]
gi|195647486|gb|ACG43211.1| two-component response regulator-like PRR95 [Zea mays]
Length = 630
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+ + D + ++ +LR+C Y V S A DIL+E+ D+VL++V +P M
Sbjct: 44 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 103
Query: 94 GFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL I +E D +PVIMMS+ VS V + + GA D+L+KP+R+ EL+N+WQHV
Sbjct: 104 GFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPLRKNELRNLWQHV 162
Query: 150 VRKR 153
RK+
Sbjct: 163 WRKQ 166
>gi|359490833|ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 688
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A ++L+ R D++L++V +P +
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSIS 99
Query: 94 GFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL EH + ++PVIMMS+ G ++ V + + GA D+L+KP+R ELKN+WQHV
Sbjct: 100 GFALLTLVMEH-EICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHV 158
Query: 150 VRKR 153
R++
Sbjct: 159 WRRQ 162
>gi|224132554|ref|XP_002321349.1| pseudo response regulator [Populus trichocarpa]
gi|222868345|gb|EEF05476.1| pseudo response regulator [Populus trichocarpa]
Length = 687
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 81/125 (64%), Gaps = 6/125 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYN-VTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LRVL+V+ D + +I+ +LR+C Y V T S A +IL+ER D++L++V +P +
Sbjct: 65 LRVLLVEADDSTRQIIAALLRKCSYKAVATVSDGLKAWEILKERPHNIDLILTEVDLPSV 124
Query: 93 DGFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G+ LL EH + ++PVIMMS+ + V + + GA DYL+KPIR+ EL+N+WQH
Sbjct: 125 SGYALLTLIMEH-EICKNIPVIMMSSQDSIKTVYKCMLRGAADYLVKPIRKNELRNLWQH 183
Query: 149 VVRKR 153
V RK+
Sbjct: 184 VWRKQ 188
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 79/122 (64%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +++ +LR+C Y V + A +++R R FD+VL++V MP +
Sbjct: 55 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVAMPSLS 114
Query: 94 GFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G +LL I ++PVIMMS+ + V++ ++ GA D+L+KP+R+ EL+N+WQHV
Sbjct: 115 GIQLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELRNLWQHVW 174
Query: 151 RK 152
R+
Sbjct: 175 RR 176
>gi|312283015|dbj|BAJ34373.1| unnamed protein product [Thellungiella halophila]
Length = 486
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 80/123 (65%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V S A + L+E+ D++L+++ +P +
Sbjct: 41 LRVLLVESDDSTRQIITALLRKCYYKVVAVSDGLAAWETLKEKSHSIDLILTELDLPSIS 100
Query: 94 GFKLLEHIGLE----MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL + +E ++PVIMMS+ ++ V++ + GA DYLIKP+R+ ELKN+WQHV
Sbjct: 101 GFALLALV-MENEACKNIPVIMMSSQDSITLVLKCMLRGAADYLIKPMRKNELKNLWQHV 159
Query: 150 VRK 152
R+
Sbjct: 160 WRR 162
>gi|414590048|tpg|DAA40619.1| TPA: hypothetical protein ZEAMMB73_710468 [Zea mays]
Length = 596
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+ + D + ++ +LR+C Y V S A DIL+E+ D+VL++V +P M
Sbjct: 44 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 103
Query: 94 GFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL I +E D +PVIMMS+ VS V + + GA D+L+KP+R+ EL+N+WQHV
Sbjct: 104 GFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGASDFLVKPLRKNELRNLWQHV 162
Query: 150 VRKR 153
RK+
Sbjct: 163 WRKQ 166
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 81/125 (64%), Gaps = 5/125 (4%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LR+L+V+ D + +I+ +LR+C Y V S A + L+ R D+VL++V +P +
Sbjct: 38 ALRILLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWETLKGRPHNIDLVLTEVELPSI 97
Query: 93 DGFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
GF LL I +E D +PVIMMS++ ++ V++ + GA D+LIKP+R+ EL+N+WQH
Sbjct: 98 SGFALLTLI-MEHDVCKNIPVIMMSSNDAITTVLKCMLKGAADFLIKPVRKNELRNLWQH 156
Query: 149 VVRKR 153
V R++
Sbjct: 157 VWRRQ 161
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+DD ++ +LR C Y VT + ++A +L E FD+VL+DV MP +
Sbjct: 306 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDVVMPYLS 365
Query: 94 GFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL + +P+++MS+ + V R + GACDYL+KP+R+ ELKN+WQHV
Sbjct: 366 GVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHVW 425
Query: 151 RK 152
RK
Sbjct: 426 RK 427
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+DD ++ +LR C Y VT + ++A +L E FD+VL+DV MP +
Sbjct: 186 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDVVMPYLS 245
Query: 94 GFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL + +P+++MS+ + V R + GACDYL+KP+R+ ELKN+WQHV
Sbjct: 246 GVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHVW 305
Query: 151 RK 152
RK
Sbjct: 306 RK 307
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 84/127 (66%), Gaps = 4/127 (3%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR-ERKGCFDVVLSDVHM 89
P + +L+VDD+ ++ +LR+C Y VT AL+ILR + G F ++L+DV M
Sbjct: 2 PNDVHILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEILRGQPPGTFSLILTDVMM 61
Query: 90 PDMDGFKLLEHI-GLEM--DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
PD+DG +LL H+ G E +LPVIMMSA+ R V IR GA DYL+KP+ ++E++++W
Sbjct: 62 PDVDGIELLRHVRGDEAWSNLPVIMMSANERTETVFECIRGGAEDYLLKPVTKKEVQHMW 121
Query: 147 QHVVRKR 153
QHV R++
Sbjct: 122 QHVWRRQ 128
>gi|303284239|ref|XP_003061410.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
gi|226456740|gb|EEH54040.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
Length = 344
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 61/84 (72%), Gaps = 5/84 (5%)
Query: 203 KEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 262
K DGE E+ TKK R+VW+ ELH +F+SAVN LGI AVPK IL+LMNV G+TRE
Sbjct: 43 KRVSDGEKEATSGRATKKRRLVWTPELHVRFMSAVNHLGITNAVPKTILQLMNVEGMTRE 102
Query: 263 NVASHLQEINLQKFRLYLKRLNGV 286
NVASH LQK+RLYLKRL GV
Sbjct: 103 NVASH-----LQKYRLYLKRLAGV 121
>gi|218196749|gb|EEC79176.1| hypothetical protein OsI_19863 [Oryza sativa Indica Group]
Length = 385
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 59 NVTTCSQAAVALDILRERKGCFDVVLSDVHMP-DMDGFKLLEHIGLEMDLPVIMMSADGR 117
NVT + A A++ L E +D+VL++VH P +DGF LL++ G +MDLPV++ SAD
Sbjct: 5 NVTPKTAARDAVEELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDD 64
Query: 118 VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
V++ + GACDYL+KP+R EELKNIWQHV R++
Sbjct: 65 KRTVLKCVNSGACDYLVKPLRHEELKNIWQHVYRRK 100
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 109 VIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEE 168
+++ S V VMR + +GACDY++KP+ E +K IW+HV+R R + + +S SL+
Sbjct: 143 LLVFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKFIWKHVLRWRLSALPANASS-SLQP 201
Query: 169 TDH 171
+DH
Sbjct: 202 SDH 204
>gi|414589528|tpg|DAA40099.1| TPA: hypothetical protein ZEAMMB73_417245 [Zea mays]
Length = 899
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQ---AAVALDILRERKGCFDVVL 84
DQFP G+RVL VDDD TCL++LE +L RC Y+ T+ + ++LRE+K FD V+
Sbjct: 89 DQFPVGMRVLAVDDDPTCLKVLENLLFRCQYHGTSPDNNGPGSHCPELLREKKDQFDPVI 148
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI 110
S+VHMPDMDGFKLLE +GLEMDLP I
Sbjct: 149 SNVHMPDMDGFKLLELVGLEMDLPGI 174
>gi|414589529|tpg|DAA40100.1| TPA: hypothetical protein ZEAMMB73_417245 [Zea mays]
Length = 443
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQ---AAVALDILRERKGCFDVVL 84
DQFP G+RVL VDDD TCL++LE +L RC Y+ T+ + ++LRE+K FD V+
Sbjct: 89 DQFPVGMRVLAVDDDPTCLKVLENLLFRCQYHGTSPDNNGPGSHCPELLREKKDQFDPVI 148
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI 110
S+VHMPDMDGFKLLE +GLEMDLP I
Sbjct: 149 SNVHMPDMDGFKLLELVGLEMDLPGI 174
>gi|449455086|ref|XP_004145284.1| PREDICTED: uncharacterized protein LOC101216423 [Cucumis sativus]
gi|449470904|ref|XP_004153145.1| PREDICTED: uncharacterized protein LOC101205712 [Cucumis sativus]
gi|449525506|ref|XP_004169758.1| PREDICTED: uncharacterized LOC101205712 [Cucumis sativus]
Length = 336
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 14/114 (12%)
Query: 186 NEGTE---GTFKAQRKRISAKEEDDGELESD----DPS--TTKKPRVVWSVELHQQFVSA 236
+E TE G+ + +++ EE D L +D DPS T K+PR+VW+ +LH++FV
Sbjct: 114 DEATERDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDV 173
Query: 237 VNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
V LGI AVPK I++LMNV GLTRENVASH LQK+RLYLKR+ G S +G
Sbjct: 174 VAHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGSSNEG 222
>gi|242093584|ref|XP_002437282.1| hypothetical protein SORBIDRAFT_10g024170 [Sorghum bicolor]
gi|241915505|gb|EER88649.1| hypothetical protein SORBIDRAFT_10g024170 [Sorghum bicolor]
Length = 158
Score = 104 bits (259), Expect = 2e-19, Method: Composition-based stats.
Identities = 58/116 (50%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Query: 18 SSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK 77
+++ + D FPAGLRVL V+ D C +ILE+ L+ C YN T + A ALD+LRERK
Sbjct: 17 AAKTGEEMAADTFPAGLRVLAVEHDRVCSKILERQLKYCNYNATMVTNAQTALDMLRERK 76
Query: 78 ---GCFDVVLSDVHM--PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHG 128
FD+V+S+V M P+MDGFKLLE IGLEMDLPVI R M R G
Sbjct: 77 EYGNQFDLVISNVAMPKPNMDGFKLLELIGLEMDLPVINSEVATRGGNCMSAARGG 132
>gi|356509155|ref|XP_003523317.1| PREDICTED: two-component response regulator-like APRR9-like
[Glycine max]
Length = 655
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 89/150 (59%), Gaps = 5/150 (3%)
Query: 9 QSSGGSGYGSSRAADVAVPDQF--PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQA 66
+ SGGSG + + ++F LRVL+V+ D + +I+ +LR+C Y V
Sbjct: 22 EDSGGSGSKAGEFKGLMRWEKFLPKMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDG 81
Query: 67 AVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADGRVSAVMR 123
A ++L+ R D++L++V +P + G+ LL I + ++PVIMMS+ +S V +
Sbjct: 82 LKAWELLKGRPHNVDLILTEVDLPSISGYALLTLIMEHEICKNIPVIMMSSQDSISTVYK 141
Query: 124 GIRHGACDYLIKPIREEELKNIWQHVVRKR 153
+ GA DYL+KPIR+ EL+N+WQHV R++
Sbjct: 142 CMLRGAADYLVKPIRKNELRNLWQHVWRRQ 171
>gi|157399680|gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
Length = 698
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 3/118 (2%)
Query: 39 VDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLL 98
++ D + +I+ +LR+C Y VT A +ILR R D++L++V +P + GF LL
Sbjct: 67 IEADDSTRQIIGALLRKCSYRVTAVPDGLKAWEILRGRPHNIDLILTEVDLPAISGFALL 126
Query: 99 EHIG---LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
I + ++PVIMMSA VS V + + GA DYL+KPIR ELKN+WQHV RK+
Sbjct: 127 TLIAEHEICKNIPVIMMSAQDSVSTVYKCMLRGAADYLVKPIRRNELKNLWQHVWRKQ 184
>gi|84570629|dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 98/185 (52%), Gaps = 6/185 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V+ D + +I+ +LR+C Y V++ S A L+E D+VL++V +P++
Sbjct: 31 VRVLLVEADDSTRKIVAALLRKCSYKVSSASDGLEAWKTLKESPNNIDLVLTEVELPNVS 90
Query: 94 GFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G+ LL + +E D +PVIMMS+ + V + GA D+L+KPIR+ EL+N+WQHV
Sbjct: 91 GYALLSMM-MEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADFLVKPIRKNELRNLWQHV 149
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DG 208
R++ E+ E + S+ Y N +G+ K + S D D
Sbjct: 150 WRRQSANGAENTPPVENETNSEYNSASNHSSYYMDSNHKNKGSEKGNDTQSSCTRPDTDA 209
Query: 209 ELESD 213
E SD
Sbjct: 210 ETSSD 214
>gi|225434873|ref|XP_002283159.1| PREDICTED: uncharacterized protein LOC100253567 [Vitis vinifera]
Length = 311
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 72/106 (67%), Gaps = 11/106 (10%)
Query: 191 GTFKAQRKRISAKEEDDGELES----DDPS--TTKKPRVVWSVELHQQFVSAVNQLGIDK 244
G+ + +++ EE D + + DDPS T K+PR+VW+ +LH++FV V LGI
Sbjct: 112 GSESRKVRKVDCAEEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKN 171
Query: 245 AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
AVPK I++LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 172 AVPKTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSNEG 212
>gi|297746038|emb|CBI16094.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 71/103 (68%), Gaps = 9/103 (8%)
Query: 192 TFKAQRKRISAKEEDDGELES--DDPS--TTKKPRVVWSVELHQQFVSAVNQLGIDKAVP 247
+F +R R A+ + E+ DDPS T K+PR+VW+ +LH++FV V LGI AVP
Sbjct: 199 SFNEERNREPAEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVP 258
Query: 248 KRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
K I++LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 259 KTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSNEG 296
>gi|51980216|gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
Length = 545
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+LV D+D L + +L +C Y VT+ A +D L D++L+++ +P
Sbjct: 30 SKVRILVCDNDAKSLEEVSTLLLKCSYQVTSVRSARQVIDALNAEGANIDIILAELDLPL 89
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G KLL++I + DL PVIMMSA VS V++ +R GA DYL+KP+R EL N+W H
Sbjct: 90 AKGMKLLKYINRDNDLRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 149
Query: 149 VVRKR 153
V R+R
Sbjct: 150 VWRRR 154
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 78/124 (62%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D +I+ +LR+C Y V + A +IL+ R D++L++V +P +
Sbjct: 56 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILTEVDLPAIS 115
Query: 94 GFKLLEHIGLEMDL----PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G+ LL I +E D+ PVIMMS+ VS V + + GA DYL+KPIR EL+N+WQHV
Sbjct: 116 GYALLTLI-MEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 174
Query: 150 VRKR 153
R++
Sbjct: 175 WRRQ 178
>gi|147860003|emb|CAN81044.1| hypothetical protein VITISV_006762 [Vitis vinifera]
Length = 362
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 72/106 (67%), Gaps = 11/106 (10%)
Query: 191 GTFKAQRKRISAKEEDDGELES----DDPS--TTKKPRVVWSVELHQQFVSAVNQLGIDK 244
G+ + +++ EE D + + DDPS T K+PR+VW+ +LH++FV V LGI
Sbjct: 163 GSESRKVRKVDCAEEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKN 222
Query: 245 AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
AVPK I++LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 223 AVPKTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSNEG 263
>gi|355469070|gb|ACU42265.2| pseudo response regulator 59 [Pisum sativum]
Length = 494
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D +I+ +LR+C Y V + A +IL+ R FD++L++V +P +
Sbjct: 45 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEVDLPSVS 104
Query: 94 GFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G+ LL I +E D +PVIMMS+ VS V + + GA DYL+KPIR EL+N+WQHV
Sbjct: 105 GYALLSLI-MEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 163
Query: 150 VRKR 153
R++
Sbjct: 164 WRRQ 167
>gi|255928918|gb|ACU42266.1| pseudo response regulator 59 [Pisum sativum]
Length = 469
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D +I+ +LR+C Y V + A +IL+ R FD++L++V +P +
Sbjct: 20 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEVDLPSVS 79
Query: 94 GFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G+ LL I +E D +PVIMMS+ VS V + + GA DYL+KPIR EL+N+WQHV
Sbjct: 80 GYALLSLI-MEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 138
Query: 150 VRKR 153
R++
Sbjct: 139 WRRQ 142
>gi|224064372|ref|XP_002301443.1| pseudo response regulator [Populus trichocarpa]
gi|222843169|gb|EEE80716.1| pseudo response regulator [Populus trichocarpa]
Length = 694
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V+ +A + L+ER D++L++V +P +
Sbjct: 44 LRVLLVEADDSTRQIIVALLRKCGYRVSAVPDGLMAWETLKERPHSIDLILTEVELPLIS 103
Query: 94 GFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G+ L + +E D +PVIMMS+ +S V++ + G+ D+L+KP+R+ EL+N+WQHV
Sbjct: 104 GYAFLALV-MEHDVCKNIPVIMMSSHDSISVVLKCMLKGSADFLVKPVRKNELRNLWQHV 162
Query: 150 VRKR 153
R++
Sbjct: 163 WRRQ 166
>gi|224121124|ref|XP_002318502.1| pseudo response regulator [Populus trichocarpa]
gi|222859175|gb|EEE96722.1| pseudo response regulator [Populus trichocarpa]
Length = 529
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V + A +IL+ R D++L++V +P +
Sbjct: 65 LRVLLVEADDSTRQIIAALLRKCSYRVVSVPDGLKAWEILKGRPHGIDLILTEVDLPSIS 124
Query: 94 GFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G+ LL EH + ++PVIMMS+ +S V + + GA DYL+KP+R+ EL+N+WQHV
Sbjct: 125 GYPLLTIIMEH-EICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPLRKNELRNLWQHV 183
Query: 150 VRK 152
R+
Sbjct: 184 WRR 186
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 81/123 (65%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+ D + +I+ +L++C Y V S A + L+E+ D++L+++ +P +
Sbjct: 26 LKVLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETLKEKSNEIDLILTELDLPAIS 85
Query: 94 GFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL EH + ++PVIMMS++ ++ V++ + GA DYLIKP+R+ ELKN+WQHV
Sbjct: 86 GFALLALVMEHEACK-NIPVIMMSSEDSMTMVLKCMLKGAADYLIKPMRKNELKNLWQHV 144
Query: 150 VRK 152
R+
Sbjct: 145 WRR 147
>gi|255559022|ref|XP_002520534.1| DNA binding protein, putative [Ricinus communis]
gi|223540376|gb|EEF41947.1| DNA binding protein, putative [Ricinus communis]
Length = 316
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 13/101 (12%)
Query: 198 KRISAKEEDDGELESD-----DPSTT---KKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 249
+RI + EE D L ++ DP+T K+PR+VW+ +LH++FV V LGI AVPK
Sbjct: 125 RRIDSGEEADSALRTENLTGEDPATARTLKRPRLVWTPQLHKRFVDVVAYLGIKNAVPKT 184
Query: 250 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
I++LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 185 IMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSSEG 220
>gi|357512643|ref|XP_003626610.1| Two-component response regulator-like PRR37 [Medicago truncatula]
gi|87240854|gb|ABD32712.1| Response regulator receiver; CCT [Medicago truncatula]
gi|355501625|gb|AES82828.1| Two-component response regulator-like PRR37 [Medicago truncatula]
Length = 636
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P LRVL+V+ D + I+ +LR C Y V A + L+ + D+VL++V +P
Sbjct: 11 PTMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETLKNKSLDIDLVLTEVDLP 70
Query: 91 DMDGFKLLEHIGLEMD------LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
+ GF LL I MD +P+IMMS+ VS V + + +GA D+LIKP+R EL+N
Sbjct: 71 SISGFSLLTQI---MDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKPVRRNELRN 127
Query: 145 IWQHVVRK 152
+WQHV R+
Sbjct: 128 LWQHVWRR 135
>gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 697
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V +A + L++ D++L++V +P +
Sbjct: 41 LRVLLVEADYSTRQIISALLRKCSYRVAAVPDGLMAWETLKDGPNNIDLILTEVDLPLIS 100
Query: 94 GFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G+ LL + +E D +PVIMMS+ +S V++ + GA D+LIKP+R ELKN+WQHV
Sbjct: 101 GYALLTLV-MEHDFCKNIPVIMMSSHDSISKVLKCMLKGAADFLIKPVRRNELKNLWQHV 159
Query: 150 VRKR 153
R++
Sbjct: 160 WRRQ 163
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V+ D + +I+ +LR C+Y V A L++ + D+VLS+V MP +
Sbjct: 21 IRVLLVETDDSTRQIVTALLRHCMYQVIPAENGDQAWARLQDMQDNIDLVLSEVVMPGLS 80
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LLE I + D+PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 81 GISLLEKIMAHNVCKDIPVIMMSSNDAMGTVFKCLSTGAVDFLVKPIRKNELKNLWQHVW 140
Query: 151 RK 152
R+
Sbjct: 141 RR 142
>gi|356518667|ref|XP_003528000.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 700
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A ++L+ R D++L++V +P +
Sbjct: 50 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWELLKGRPHNVDLILTEVDLPSVS 109
Query: 94 GFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G+ LL EH + ++PVIMMS+ +S V + + GA DYL+KPIR+ EL+N+WQHV
Sbjct: 110 GYALLTLIMEH-EICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHV 168
Query: 150 VRKR 153
R++
Sbjct: 169 WRRQ 172
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A ++L+ + D++L++V +P +
Sbjct: 44 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEMLKGKPHNIDLILTEVELPSIS 103
Query: 94 GFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G+ LL EH + ++PVIMMS+ VS V + + GA DYL+KPIR+ EL+N+WQHV
Sbjct: 104 GYALLTLIMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIRKNELRNLWQHV 162
Query: 150 VRKR 153
R++
Sbjct: 163 WRRQ 166
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 102 bits (253), Expect = 8e-19, Method: Composition-based stats.
Identities = 61/151 (40%), Positives = 88/151 (58%), Gaps = 16/151 (10%)
Query: 5 QRIVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCS 64
+R +SGG G + +DV VLVVDD+ C + +LR+C Y VTT
Sbjct: 6 RRTSATSGGDG--PTATSDV----------HVLVVDDERICRTVTSSLLRKCGYRVTTAE 53
Query: 65 QAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE---MDLPVIMMSADGRVSAV 121
AL++LR R F ++L+DV MP +DG LL+ + + D+PVIMMSA+ V
Sbjct: 54 SGEEALELLR-RGTEFHLLLTDVMMPGIDGPALLQIVRNDERLRDMPVIMMSANEHSDTV 112
Query: 122 MRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
R I++GA DYL+KP+ + +K++WQHV RK
Sbjct: 113 FRCIQYGAEDYLLKPVSRKAVKHMWQHVWRK 143
>gi|356520227|ref|XP_003528765.1| PREDICTED: two-component response regulator-like PRR95-like isoform
2 [Glycine max]
Length = 722
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 78/124 (62%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A + L+++ D++L++V +P +
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAIS 88
Query: 94 GFKLLEHIGLEMDL----PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL I +E D+ PVIMMS+ VS ++ + GA D+LIKPIR+ EL+N+WQHV
Sbjct: 89 GFALLSLI-MEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHV 147
Query: 150 VRKR 153
R+
Sbjct: 148 WRRH 151
>gi|168032210|ref|XP_001768612.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680111|gb|EDQ66550.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 185
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 70/107 (65%), Gaps = 10/107 (9%)
Query: 193 FKAQRKRISAKEEDDG-----ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVP 247
FK ++ +AK+ D G E + T K+PR+VW+ +LH++FV AV LGI AVP
Sbjct: 74 FKERKDAGNAKDTDSGGGPVNSNEETNARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP 133
Query: 248 KRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITN 294
K I++LMNV GLTRENVASH LQK+RLYLKR+ G+S G N
Sbjct: 134 KTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSSDGPPAN 175
>gi|356520225|ref|XP_003528764.1| PREDICTED: two-component response regulator-like PRR95-like isoform
1 [Glycine max]
Length = 703
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 78/124 (62%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A + L+++ D++L++V +P +
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAIS 88
Query: 94 GFKLLEHIGLEMDL----PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL I +E D+ PVIMMS+ VS ++ + GA D+LIKPIR+ EL+N+WQHV
Sbjct: 89 GFALLSLI-MEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHV 147
Query: 150 VRKR 153
R+
Sbjct: 148 WRRH 151
>gi|18424319|ref|NP_568919.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|334188506|ref|NP_001190574.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4.1|APRR3_ARATH RecName: Full=Two-component response regulator-like APRR3; AltName:
Full=Pseudo-response regulator 3
gi|8777349|dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3 [Arabidopsis thaliana]
gi|225879138|dbj|BAH30639.1| hypothetical protein [Arabidopsis thaliana]
gi|332009893|gb|AED97276.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009894|gb|AED97277.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 495
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + I+ +L+ C Y VT A IL + K C D+VL++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ H L+ ++PVIMMS+ + V + + +GA D+L+KPIR+ ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 150 VRK 152
R+
Sbjct: 183 WRR 185
>gi|67005935|gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + I+ +L+ C Y VT A IL + K C D+VL++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ H L+ ++PVIMMS+ + V + + +GA D+L+KPIR+ ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 150 VRK 152
R+
Sbjct: 183 WRR 185
>gi|258678906|dbj|BAI39993.1| pseudo-response regulator homolog protein [Physcomitrella patens
subsp. patens]
Length = 907
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LR+L+V+ D ++ +LR C Y VT + ++A +L + FD+VL+DV MP +
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 242
Query: 94 GFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL + ++ + +P+++MS+ + V R + GACDYL+KP+R+ EL+N+WQHV
Sbjct: 243 GVGLLSKM-MKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHV 301
Query: 150 VRK 152
RK
Sbjct: 302 WRK 304
>gi|325910792|dbj|BAJ83826.1| circadian response regulator 1a [Physcomitrella patens subsp.
patens]
Length = 907
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LR+L+V+ D ++ +LR C Y VT + ++A +L + FD+VL+DV MP +
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 242
Query: 94 GFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL + ++ + +P+++MS+ + V R + GACDYL+KP+R+ EL+N+WQHV
Sbjct: 243 GVGLLSKM-MKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHV 301
Query: 150 VRK 152
RK
Sbjct: 302 WRK 304
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VLVVDD+ C + +LRRC Y VT AL++LR R F ++L+DV MP +D
Sbjct: 30 VHVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELLR-RGTEFHMLLTDVMMPGID 88
Query: 94 GFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL+ + + D+PV+MMSA+ V R I+HGA DYL+KP+ +K++W HV
Sbjct: 89 GPALLQIVRNDERLRDMPVVMMSANEHSDTVFRCIQHGAEDYLLKPVSRRAVKHMWTHVW 148
Query: 151 RK 152
RK
Sbjct: 149 RK 150
>gi|356571269|ref|XP_003553801.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 695
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A + L+ + D++L++V +P +
Sbjct: 33 LRVLLVEADDSTRQIIAALLRKCGYKVVAFCDGLKAWETLKNKAFDLDLILTEVDLPSIS 92
Query: 94 GFKLLEHIGLEMDL----PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL I +E D+ PVIMMS+ VS V + + GA D+LIKP+R+ EL+N+WQHV
Sbjct: 93 GFSLLTLI-MEHDICKNIPVIMMSSHDSVSMVFKCMLKGAADFLIKPVRKNELRNLWQHV 151
Query: 150 VRK 152
R+
Sbjct: 152 WRR 154
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + D+PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 151 RK 152
R+
Sbjct: 201 RR 202
>gi|302796211|ref|XP_002979868.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
gi|300152628|gb|EFJ19270.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
Length = 865
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+DD + ++ +LR C Y VT + A +IL R D+VL+D+ MP +
Sbjct: 109 LKVLLVEDDDSTRHVVAALLRNCGYEVTPAASGLQAWEILETRSSSVDLVLTDLMMPRLS 168
Query: 94 GFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G +LL I + D +PV+MMS + V++ + GA D+L+KP+R+ ELKN+WQH
Sbjct: 169 GIELLGKI-MSRDSPKRIPVVMMSCLDSMDVVLKCLSKGAVDFLVKPVRKNELKNLWQHF 227
Query: 150 VR 151
R
Sbjct: 228 WR 229
>gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V S A + L+ D++L++V +P +
Sbjct: 3 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 62
Query: 94 GFKLLEHIGLEMDL----PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL I +E D+ PVIMMS+ +S V++ + GA D+L+KP+R+ EL+N+WQHV
Sbjct: 63 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHV 121
Query: 150 VRK 152
R+
Sbjct: 122 WRR 124
>gi|334188508|ref|NP_001190575.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009895|gb|AED97278.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 522
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + I+ +L+ C Y VT A IL + K C D+VL++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ H L+ ++PVIMMS+ + V + + +GA D+L+KPIR+ ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 150 VRK 152
R+
Sbjct: 183 WRR 185
>gi|67005937|gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + I+ +L+ C Y +T A IL + K C D+VL++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEITAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ H L+ ++PVIMMS+ + V + + +GA D+L+KPIR+ ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 150 VRK 152
R+
Sbjct: 183 WRR 185
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMPCLS 142
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + D+PVIMMS + +S V + + GA D+L+KP+R+ ELKN+WQHV
Sbjct: 143 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 202
Query: 151 RK 152
R+
Sbjct: 203 RR 204
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + D+PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 151 RK 152
R+
Sbjct: 201 RR 202
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + D+PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 151 RK 152
R+
Sbjct: 201 RR 202
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + D+PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 151 RK 152
R+
Sbjct: 201 RR 202
>gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 641
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V S A + L+ D++L++V +P +
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 110
Query: 94 GFKLLEHIGLEMDL----PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL I +E D+ PVIMMS+ +S V++ + GA D+L+KP+R+ EL+N+WQHV
Sbjct: 111 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHV 169
Query: 150 VRK 152
R+
Sbjct: 170 WRR 172
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + D+PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 151 RK 152
R+
Sbjct: 201 RR 202
>gi|52783225|sp|Q6LA42.2|APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName:
Full=Pseudo-response regulator 5
gi|9758535|dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
gi|23506027|gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
Length = 558
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 81/138 (58%), Gaps = 14/138 (10%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LRVL+V+ D + +I+ +LR+C Y V A ++L+ + D++L++V +P +
Sbjct: 49 ALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 108
Query: 93 DGFKLLEHIGLEMDL----PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G+ LL I +E D+ PVIMMS V+ V + + GA DYL+KP+R EL+N+WQH
Sbjct: 109 SGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 167
Query: 149 VVRKR---------WNEN 157
V R++ WNE+
Sbjct: 168 VWRRQTSLAPDSFPWNES 185
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 151 RK 152
R+
Sbjct: 200 RR 201
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMPCLS 142
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + D+PVIMMS + +S V + + GA D+L+KP+R+ ELKN+WQHV
Sbjct: 143 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 202
Query: 151 RK 152
R+
Sbjct: 203 RR 204
>gi|15232597|ref|NP_190248.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|79314533|ref|NP_001030823.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|6523067|emb|CAB62334.1| putative protein [Arabidopsis thaliana]
gi|30102630|gb|AAP21233.1| At3g46640 [Arabidopsis thaliana]
gi|71067050|dbj|BAE16277.1| PHYTOCLOCK 1 [Arabidopsis thaliana]
gi|110743672|dbj|BAE99673.1| hypothetical protein [Arabidopsis thaliana]
gi|332644665|gb|AEE78186.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|332644666|gb|AEE78187.1| protein phytoclock 1 [Arabidopsis thaliana]
Length = 323
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 202 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 261
A EE D E T K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTR
Sbjct: 126 AAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTR 185
Query: 262 ENVASHLQEINLQKFRLYLKRLNGVSQQG 290
ENVASH LQK+RLYLKR+ G++ +G
Sbjct: 186 ENVASH-----LQKYRLYLKRMQGLTNEG 209
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 151 RK 152
R+
Sbjct: 200 RR 201
>gi|297796967|ref|XP_002866368.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
gi|297312203|gb|EFH42627.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
Length = 498
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + I+ +L+ C Y V S A IL + K C D+VL++V +P
Sbjct: 66 LKVLLVENDDSTRHIVTALLKNCSYEVNAVSDVLEAWRILEDEKSCIDLVLTEVVLPVHS 125
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ H L+ ++PVIMMS+ + V + + +GA D+L+KPIR+ ELKN+WQHV
Sbjct: 126 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 184
Query: 150 VRK 152
RK
Sbjct: 185 WRK 187
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 151 RK 152
R+
Sbjct: 200 RR 201
>gi|334185766|ref|NP_001190022.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|332644667|gb|AEE78188.1| protein phytoclock 1 [Arabidopsis thaliana]
Length = 324
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 202 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 261
A EE D E T K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTR
Sbjct: 126 AAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTR 185
Query: 262 ENVASHLQEINLQKFRLYLKRLNGVSQQG 290
ENVASH LQK+RLYLKR+ G++ +G
Sbjct: 186 ENVASH-----LQKYRLYLKRMQGLTNEG 209
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 61 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 120
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 121 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 180
Query: 151 RK 152
R+
Sbjct: 181 RR 182
>gi|168065344|ref|XP_001784613.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
gi|162663845|gb|EDQ50588.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
Length = 425
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LR+L+V+ D ++ +LR C Y VT + ++A +L + FD+VL+DV MP +
Sbjct: 12 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 71
Query: 94 GFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL + +P+++MS+ + V R + GACDYL+KP+R+ EL+N+WQHV
Sbjct: 72 GVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVW 131
Query: 151 RK 152
RK
Sbjct: 132 RK 133
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 95/174 (54%), Gaps = 18/174 (10%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VDDD + ++ +LR C Y VT S A L + D+VL++V MP +
Sbjct: 86 IKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEVAMPFVS 145
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ HI L+ ++PVIMMS+ + V + + GA D+L+KPIR ELKN+WQHV
Sbjct: 146 GIGLLCKIMSHIALK-NIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHV 204
Query: 150 VRK----------RWNENKEHENSGSLEETDHHKRGSDEIEYAS---SVNEGTE 190
R+ ++ S S+ D++ SDE +Y S SV +G++
Sbjct: 205 WRRCHSSSDSGSESGTNTRKFAKSRSICAYDNNSGSSDENDYGSRGLSVRDGSD 258
>gi|224131058|ref|XP_002320991.1| response regulator [Populus trichocarpa]
gi|222861764|gb|EEE99306.1| response regulator [Populus trichocarpa]
Length = 144
Score = 100 bits (249), Expect = 2e-18, Method: Composition-based stats.
Identities = 65/150 (43%), Positives = 87/150 (58%), Gaps = 7/150 (4%)
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACD 131
+LRE K FDV+ +D+ M +MDG +LL+ I EMDLPV+++S+D V++G+ GACD
Sbjct: 1 MLREDKNRFDVLGNDLQMHEMDGIQLLKIIRSEMDLPVVIISSDDEQELVLKGVLQGACD 60
Query: 132 YLIKPIREEELKNIWQHVVRKRWNENKEH-ENSGSLEETDHHKRGSDEIEYASSVNEGTE 190
LIKP++ E LK WQHVVRK+ N E E EE H S + S N G
Sbjct: 61 CLIKPVKMEALKVFWQHVVRKKINNTLERLEQPIRKEEDKLHLENSCIVSCTVSGNAGHP 120
Query: 191 GTFKAQRKRISAKEEDDGELESDDPSTTKK 220
T K ++I ED+G+ SD ST KK
Sbjct: 121 MTLK---RKIDG--EDEGK-ASDGLSTGKK 144
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 95/174 (54%), Gaps = 18/174 (10%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VDDD + ++ +LR C Y VT S A L + D+VL++V MP +
Sbjct: 74 IKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEVAMPFVS 133
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ HI L+ ++PVIMMS+ + V + + GA D+L+KPIR ELKN+WQHV
Sbjct: 134 GIGLLCKIMSHIALK-NIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHV 192
Query: 150 VRK----------RWNENKEHENSGSLEETDHHKRGSDEIEYAS---SVNEGTE 190
R+ ++ S S+ D++ SDE +Y S SV +G++
Sbjct: 193 WRRCHSSSDSGSESGTNTRKFAKSRSICAYDNNSGSSDENDYGSRGLSVRDGSD 246
>gi|281308386|gb|ADA58341.1| pseudo-response regulator 5a [Brassica rapa]
Length = 497
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LRVL+V+ D + +I+ +LR+C Y V A ++L+ D++L++V +P +
Sbjct: 54 ALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGNPESVDLILAEVDLPSI 113
Query: 93 DGFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G+ LL I +E D +PVIMMS V+ V + + GA DYL+KP+R EL+N+WQH
Sbjct: 114 SGYALLTLI-MEHDVCKNIPVIMMSTHDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 172
Query: 149 VVRKR 153
V R+R
Sbjct: 173 VWRRR 177
>gi|116787129|gb|ABK24384.1| unknown [Picea sitchensis]
Length = 274
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 70/99 (70%), Gaps = 11/99 (11%)
Query: 198 KRISAKEEDDG-----ELESDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRIL 251
KRI +EE+ E ++P+ T K+PR+VW+ +LH++FV AV LGI AVPK I+
Sbjct: 71 KRIELEEEESSVGGVTENVGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIM 130
Query: 252 ELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
+LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 131 QLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSSEG 164
>gi|356504197|ref|XP_003520885.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 703
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +L +C Y V A + L+ + D++L++V +P +
Sbjct: 35 LRVLLVEADDSTRQIISALLHKCSYKVVAFCDGLKAWETLKNKPSDIDLILTEVDLPSIS 94
Query: 94 GFKLLEHIGLEMDL----PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL I +E D+ PVIMMS+ VS V++ + GA D+LIKP+R EL+N+WQHV
Sbjct: 95 GFSLLTLI-MEHDICKNIPVIMMSSHDSVSMVLKCMLKGAADFLIKPVRRNELRNLWQHV 153
Query: 150 VRKR 153
R+
Sbjct: 154 WRRH 157
>gi|18420797|ref|NP_568446.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5 [Arabidopsis thaliana]
gi|332005931|gb|AED93314.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
Length = 667
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 81/138 (58%), Gaps = 14/138 (10%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LRVL+V+ D + +I+ +LR+C Y V A ++L+ + D++L++V +P +
Sbjct: 158 ALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 217
Query: 93 DGFKLLEHIGLEMDL----PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G+ LL I +E D+ PVIMMS V+ V + + GA DYL+KP+R EL+N+WQH
Sbjct: 218 SGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 276
Query: 149 VVRKR---------WNEN 157
V R++ WNE+
Sbjct: 277 VWRRQTSLAPDSFPWNES 294
>gi|326491043|dbj|BAK05621.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 250
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 102/220 (46%), Gaps = 32/220 (14%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD--VHMP 90
GL+VL VDDD LR L Q LRRC Y VT A AL L + FD V++
Sbjct: 20 GLKVLAVDDDPVYLRTLTQTLRRCGYEVTAKPSPAEALKELEKNPDGFDFVMTAALTRGR 79
Query: 91 DMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
MDGF LL IG + VI+ S + + RG + GAC KP+R+ ++ IWQHV+
Sbjct: 80 GMDGFDLLNRIGERYPV-VILFSGEESMETRRRGTQGGACYLAEKPMRDTQIYMIWQHVL 138
Query: 151 RKRWNEN----------KEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 200
R R + G LE+T KRG VN+ +G
Sbjct: 139 RWRRENAAGVVAANANPRPSSEGGHLEDTP-RKRG-------RGVNDSGKG--------- 181
Query: 201 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 240
K DG +TTKK + W+ E+H+ FVSAV QL
Sbjct: 182 --KGASDGGGVQPVTNTTKKKKFEWTSEMHELFVSAVTQL 219
>gi|297815826|ref|XP_002875796.1| hypothetical protein ARALYDRAFT_485038 [Arabidopsis lyrata subsp.
lyrata]
gi|297321634|gb|EFH52055.1| hypothetical protein ARALYDRAFT_485038 [Arabidopsis lyrata subsp.
lyrata]
Length = 325
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 5/90 (5%)
Query: 201 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 260
+A EE D E T K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLT
Sbjct: 126 AAAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLT 185
Query: 261 RENVASHLQEINLQKFRLYLKRLNGVSQQG 290
RENVASH LQK+RLYLKR+ G++ +G
Sbjct: 186 RENVASH-----LQKYRLYLKRMQGLTNEG 210
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 151 RK 152
R+
Sbjct: 182 RR 183
>gi|303283678|ref|XP_003061130.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
gi|226457481|gb|EEH54780.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
Length = 532
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 67/103 (65%), Gaps = 8/103 (7%)
Query: 193 FKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 252
FK R+ + D E DD K+PR+VW+ LH++FV AV+ LGI AVPK I++
Sbjct: 229 FKRSREEAMSHHLDGSE---DDAQALKRPRLVWTPPLHKRFVDAVSHLGIRNAVPKTIMQ 285
Query: 253 LMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNS 295
LMNV GLTRENVASH LQK+RLYLKRL+G + + NS
Sbjct: 286 LMNVDGLTRENVASH-----LQKYRLYLKRLHGGCSESTMENS 323
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 151 RK 152
R+
Sbjct: 182 RR 183
>gi|255086767|ref|XP_002509350.1| g2-like myb-family transcription factor [Micromonas sp. RCC299]
gi|226524628|gb|ACO70608.1| g2-like myb-family transcription factor [Micromonas sp. RCC299]
Length = 306
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%), Gaps = 5/68 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KKPR+VW+ ELH +F++AVN LGI AVPK IL+LMNV G+TRENVASH LQK+RL
Sbjct: 58 KKPRLVWTPELHMRFMNAVNHLGIKNAVPKTILQLMNVEGMTRENVASH-----LQKYRL 112
Query: 279 YLKRLNGV 286
YLKRL GV
Sbjct: 113 YLKRLAGV 120
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 151 RK 152
R+
Sbjct: 182 RR 183
>gi|302757555|ref|XP_002962201.1| hypothetical protein SELMODRAFT_36646 [Selaginella moellendorffii]
gi|300170860|gb|EFJ37461.1| hypothetical protein SELMODRAFT_36646 [Selaginella moellendorffii]
Length = 187
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 58/74 (78%), Gaps = 5/74 (6%)
Query: 217 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 276
T K+PR+VW+ +LH++FV AV LGI AVPK I++LMNV GLTRENVASH LQK+
Sbjct: 105 TLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKY 159
Query: 277 RLYLKRLNGVSQQG 290
RLYLKR+ G+S +G
Sbjct: 160 RLYLKRMQGLSSEG 173
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 151 RK 152
R+
Sbjct: 182 RR 183
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D +++ +LR+C Y V + A L + + D+VL++V MP +
Sbjct: 82 LRVLLVENDDCTRQVVGALLRKCGYEVISAENGLHAWQYLEDLQNRIDLVLTEVAMPCLS 141
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + D+PVIMMS + + V + + GA D+L+KPIR+ ELKN+WQH+
Sbjct: 142 GISLLSKIMSHKICKDIPVIMMSKNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHIW 201
Query: 151 RK 152
R+
Sbjct: 202 RR 203
>gi|410716788|gb|AFV78770.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716832|gb|AFV78792.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQKLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGA 129
L D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 130 CDYLIKPIREEELKNIWQHVVRKR 153
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+V+DD + ++ +LR C Y VT S A +L + + D+VL++V MP +
Sbjct: 90 IKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPENGIDLVLTEVAMPILS 149
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ H L+ ++PVIMMS+ + V + + GA D+L+KPIR ELKN+WQHV
Sbjct: 150 GIGLLCKIMSHKTLK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHV 208
Query: 150 VRK 152
R+
Sbjct: 209 WRR 211
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + D+PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 151 RK 152
R+
Sbjct: 201 RR 202
>gi|410718344|gb|AFV79548.1| pseudo response regulator 1 [Pinus pinaster]
Length = 565
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGA 129
L D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 130 CDYLIKPIREEELKNIWQHVVRKR 153
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|222424975|dbj|BAH20438.1| AT3G46640 [Arabidopsis thaliana]
Length = 323
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 202 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 261
A EE D E T K+PR+VW+ +LH++FV V LGI AVPK I+++MNV GLTR
Sbjct: 126 AAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQVMNVEGLTR 185
Query: 262 ENVASHLQEINLQKFRLYLKRLNGVSQQG 290
ENVASH LQK+RLYLKR+ G++ +G
Sbjct: 186 ENVASH-----LQKYRLYLKRMQGLTNEG 209
>gi|410716908|gb|AFV78830.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 3/142 (2%)
Query: 15 GYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR 74
G GS +D A + +R+L+ D D T + L ++LR+C Y VT S A + +L
Sbjct: 2 GKGSISNSDAASSVLDRSFVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 75 ERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACD 131
D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 132 YLIKPIREEELKNIWQHVVRKR 153
YL+KP+R EL N+W H+ R+R
Sbjct: 122 YLVKPLRINELLNLWMHMWRRR 143
>gi|410716834|gb|AFV78793.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716890|gb|AFV78821.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGA 129
L D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 130 CDYLIKPIREEELKNIWQHVVRKR 153
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
Length = 991
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 77/124 (62%), Gaps = 5/124 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V S A + L+ D++L++V +P +
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 110
Query: 94 GFKLLEHIGLEMDL----PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL I +E D+ PVIMMS+ +S V++ + GA D+L+KP+R+ EL N+WQHV
Sbjct: 111 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELXNLWQHV 169
Query: 150 VRKR 153
R+
Sbjct: 170 WRRH 173
>gi|410716904|gb|AFV78828.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGA 129
L D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 130 CDYLIKPIREEELKNIWQHVVRKR 153
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716738|gb|AFV78745.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716742|gb|AFV78747.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716744|gb|AFV78748.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716752|gb|AFV78752.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716756|gb|AFV78754.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716768|gb|AFV78760.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716772|gb|AFV78762.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716776|gb|AFV78764.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716784|gb|AFV78768.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716808|gb|AFV78780.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716810|gb|AFV78781.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716828|gb|AFV78790.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGA 129
L D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 130 CDYLIKPIREEELKNIWQHVVRKR 153
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716910|gb|AFV78831.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGA 129
L D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 130 CDYLIKPIREEELKNIWQHVVRKR 153
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716728|gb|AFV78740.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716732|gb|AFV78742.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716734|gb|AFV78743.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716736|gb|AFV78744.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716740|gb|AFV78746.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716746|gb|AFV78749.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716748|gb|AFV78750.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716754|gb|AFV78753.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716758|gb|AFV78755.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716760|gb|AFV78756.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716762|gb|AFV78757.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716764|gb|AFV78758.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716766|gb|AFV78759.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716770|gb|AFV78761.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716782|gb|AFV78767.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716786|gb|AFV78769.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716790|gb|AFV78771.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716792|gb|AFV78772.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716794|gb|AFV78773.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716796|gb|AFV78774.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716800|gb|AFV78776.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716804|gb|AFV78778.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716806|gb|AFV78779.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716812|gb|AFV78782.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716816|gb|AFV78784.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716818|gb|AFV78785.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716820|gb|AFV78786.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716822|gb|AFV78787.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716826|gb|AFV78789.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716830|gb|AFV78791.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716836|gb|AFV78794.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716838|gb|AFV78795.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716840|gb|AFV78796.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716842|gb|AFV78797.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716844|gb|AFV78798.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716846|gb|AFV78799.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716848|gb|AFV78800.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716850|gb|AFV78801.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716852|gb|AFV78802.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716854|gb|AFV78803.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716856|gb|AFV78804.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716858|gb|AFV78805.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716860|gb|AFV78806.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716866|gb|AFV78809.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716868|gb|AFV78810.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716870|gb|AFV78811.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716872|gb|AFV78812.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716878|gb|AFV78815.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716880|gb|AFV78816.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716882|gb|AFV78817.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716884|gb|AFV78818.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716886|gb|AFV78819.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716888|gb|AFV78820.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716892|gb|AFV78822.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716894|gb|AFV78823.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716896|gb|AFV78824.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716900|gb|AFV78826.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716902|gb|AFV78827.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716906|gb|AFV78829.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716912|gb|AFV78832.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716914|gb|AFV78833.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716916|gb|AFV78834.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716920|gb|AFV78836.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716922|gb|AFV78837.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716924|gb|AFV78838.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716926|gb|AFV78839.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716928|gb|AFV78840.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716930|gb|AFV78841.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716932|gb|AFV78842.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716934|gb|AFV78843.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716936|gb|AFV78844.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716938|gb|AFV78845.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716940|gb|AFV78846.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716944|gb|AFV78848.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716948|gb|AFV78850.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716950|gb|AFV78851.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716954|gb|AFV78853.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGA 129
L D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 130 CDYLIKPIREEELKNIWQHVVRKR 153
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716774|gb|AFV78763.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716780|gb|AFV78766.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716802|gb|AFV78777.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716814|gb|AFV78783.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716864|gb|AFV78808.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716874|gb|AFV78813.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716918|gb|AFV78835.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGA 129
L D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 130 CDYLIKPIREEELKNIWQHVVRKR 153
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716750|gb|AFV78751.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716798|gb|AFV78775.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716942|gb|AFV78847.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716946|gb|AFV78849.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716952|gb|AFV78852.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716956|gb|AFV78854.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716958|gb|AFV78855.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGA 129
L D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 130 CDYLIKPIREEELKNIWQHVVRKR 153
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716778|gb|AFV78765.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716862|gb|AFV78807.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGA 129
L D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 130 CDYLIKPIREEELKNIWQHVVRKR 153
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716876|gb|AFV78814.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716898|gb|AFV78825.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGA 129
L D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 130 CDYLIKPIREEELKNIWQHVVRKR 153
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716824|gb|AFV78788.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGA 129
L D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 130 CDYLIKPIREEELKNIWQHVVRKR 153
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716730|gb|AFV78741.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGA 129
L D++L++V +P GFK+L++I L P++MMSA V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 130 CDYLIKPIREEELKNIWQHVVRKR 153
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT + A +L D+VL++V MP +
Sbjct: 77 LKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVLENLSNNVDIVLTEVVMPSLS 136
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ HI L+ +PVIMMS+ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 137 GIGLLDKIMSHITLKT-IPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHV 195
Query: 150 VRK 152
R+
Sbjct: 196 WRR 198
>gi|168009969|ref|XP_001757677.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690953|gb|EDQ77317.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 197
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 5/78 (6%)
Query: 217 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 276
T K+PR+VW+ +LH++FV AV LGI AVPK I++LMNV GLTRENVASH LQK+
Sbjct: 112 TLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKY 166
Query: 277 RLYLKRLNGVSQQGGITN 294
RLYLKR+ G+ G + N
Sbjct: 167 RLYLKRMQGLPSDGPMAN 184
>gi|168009967|ref|XP_001757676.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690952|gb|EDQ77316.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 193
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 5/78 (6%)
Query: 217 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 276
T K+PR+VW+ +LH++FV AV LGI AVPK I++LMNV GLTRENVASH LQK+
Sbjct: 108 TLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKY 162
Query: 277 RLYLKRLNGVSQQGGITN 294
RLYLKR+ G+ G + N
Sbjct: 163 RLYLKRMQGLPSDGPMAN 180
>gi|334715191|gb|AEG90651.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS++ + V + + GA D+L+ PIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 151 RK 152
R+
Sbjct: 200 RR 201
>gi|84570635|dbj|BAE72702.1| pseudo-response regulator 95 homologue [Lemna gibba]
Length = 460
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V++ S A L+E+ D+VL++V +P++
Sbjct: 31 LRVLLVEADDSTRKIVAALLRKCGYKVSSASDGLEAWKTLKEKPNDTDLVLTEVELPNVS 90
Query: 94 GFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G+ LL EH + +PVIMMS++ + V + GA D+L+KPIR+ EL+N+WQHV
Sbjct: 91 GYALLSMMMEHETCK-SIPVIMMSSNDSMKMVFECMLKGAADFLVKPIRKNELRNLWQHV 149
Query: 150 VRK 152
R+
Sbjct: 150 WRR 152
>gi|356538978|ref|XP_003537977.1| PREDICTED: putative two-component response regulator ARR21-like
[Glycine max]
Length = 323
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 70/101 (69%), Gaps = 9/101 (8%)
Query: 194 KAQRK-RISAKEEDDGELESD---DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 249
+ QRK A EE D ++++ + + K+PR+VW+ +LH++FV V LGI AVPK
Sbjct: 114 RKQRKIDCGAAEEADSAVQTETSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKT 173
Query: 250 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
I++LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 174 IMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSNEG 209
>gi|297793511|ref|XP_002864640.1| hypothetical protein ARALYDRAFT_496092 [Arabidopsis lyrata subsp.
lyrata]
gi|297310475|gb|EFH40899.1| hypothetical protein ARALYDRAFT_496092 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 72/115 (62%), Gaps = 10/115 (8%)
Query: 180 EYASSVNEGTEGTFKAQRKR-----ISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFV 234
E+ V + G+ ++K+ + EE D E T+K+PR+VW+ +LH++FV
Sbjct: 86 EFVDRVGSSSPGSDPKKQKKSGGGEAAVAEEGDSGTEDASGRTSKRPRLVWTPQLHKRFV 145
Query: 235 SAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQ 289
V LGI AVPK I++LMNV GLTRENVASH LQK+RLYLKR+ G++ +
Sbjct: 146 DVVAHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYLKRIQGLTTE 195
>gi|159487595|ref|XP_001701808.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
gi|158281027|gb|EDP06783.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
Length = 610
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 32/154 (20%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL---RERKGCFDVVLSDVHM 89
G V++V+DD CL+++EQ+LR+ Y V+T S A AL +L ++R D++L+D+ M
Sbjct: 5 GFHVVLVEDDNICLKVVEQLLRKLSYRVSTASDGAAALKVLADCKQRGDKVDLILTDILM 64
Query: 90 PDMDGFKLLE---HIGLEMDLPVI----------------------MMSADGRVSAVMRG 124
P++ GF L+ H D+PV+ +MS+ +V++
Sbjct: 65 PEVTGFDLINEVVHGETFADIPVVASGTFLGFGRRTVRTVAWSRCQVMSSQDSQESVLQA 124
Query: 125 IRHGACDYLIKPIREEELKNIWQHVVRKRWNENK 158
+ GA DYLIKPIR+ EL +WQHV W N+
Sbjct: 125 FQAGAADYLIKPIRKNELATLWQHV----WRANR 154
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+DD + ++ +LR C Y V + A +L +R D+VL+DV MP +
Sbjct: 42 LKVLLVEDDDSTRHVVAALLRNCGYQVVPAANGLQAWSLLDDRNREIDLVLTDVVMPGLS 101
Query: 94 GFKLLE---HIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL H +PV+MMS+ + V + + GA D+L+KP+R+ ELKN+WQH
Sbjct: 102 GLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFLVKPVRKNELKNLWQHAW 161
Query: 151 RK 152
RK
Sbjct: 162 RK 163
>gi|334715189|gb|AEG90650.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS++ + V + + GA D+L+ PIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 151 RK 152
R+
Sbjct: 200 RR 201
>gi|334715193|gb|AEG90652.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS++ + V + + GA D+L+ PIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 151 RK 152
R+
Sbjct: 200 RR 201
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + D+PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 151 RK 152
R+
Sbjct: 201 RR 202
>gi|422898326|dbj|BAM67029.1| timing of cab expression 1-like [Chrysanthemum seticuspe f.
boreale]
Length = 562
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D+ + +L +C Y VT +D L D++LS+V +P
Sbjct: 18 SKVRILLCDNDMKSSVEVYDLLSKCSYQVTPVRSPRQVIDALNVEGPDIDIILSEVDLPM 77
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
GFK+L++I + DL PVIMMSA V+ V++ +R GA DYL+KP+R EL N+W H
Sbjct: 78 AKGFKMLKYIMRDKDLRRIPVIMMSAQDEVAVVVKCLRLGAADYLVKPLRTNELLNLWTH 137
Query: 149 VVRKR 153
+ R+R
Sbjct: 138 MWRRR 142
>gi|15238463|ref|NP_200765.1| myb family transcription factor [Arabidopsis thaliana]
gi|8885561|dbj|BAA97491.1| unnamed protein product [Arabidopsis thaliana]
gi|26449790|dbj|BAC42018.1| ARR1 like protein [Arabidopsis thaliana]
gi|71067052|dbj|BAE16278.1| putative transcription factor [Arabidopsis thaliana]
gi|109946485|gb|ABG48421.1| At5g59570 [Arabidopsis thaliana]
gi|332009824|gb|AED97207.1| myb family transcription factor [Arabidopsis thaliana]
Length = 298
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 201 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 260
S EE D E T+K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLT
Sbjct: 122 STAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLT 181
Query: 261 RENVASHLQEINLQKFRLYLKRLNGVSQQ 289
RENVASH LQK+RLYLKR+ G++ +
Sbjct: 182 RENVASH-----LQKYRLYLKRIQGLTTE 205
>gi|21593668|gb|AAM65635.1| ARR1 protein-like [Arabidopsis thaliana]
Length = 298
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 201 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 260
S EE D E T+K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLT
Sbjct: 122 STAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLT 181
Query: 261 RENVASHLQEINLQKFRLYLKRLNGVSQQ 289
RENVASH LQK+RLYLKR+ G++ +
Sbjct: 182 RENVASH-----LQKYRLYLKRIQGLTTE 205
>gi|316930963|gb|ADU60098.1| pseudo response regulator 1 [Zea mays]
Length = 515
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 32/182 (17%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D D T R + ++L C Y+VT ++IL G D++L++V +P
Sbjct: 24 VRILLCDGDATSPREVLRLLCNCAYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPVSK 83
Query: 94 GFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
FK+L++I DL P+IMMS VS V++ +R GA +YL+KP+R EL N+W HV
Sbjct: 84 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 143
Query: 151 RKR----------WNENKE---------HENSGSL--EETDHHKRG--------SDEIEY 181
R+R +N+N E + NS +L +ETD +G S ++EY
Sbjct: 144 RRRRMLGLPEKNFFNDNFELVLSEPSDANTNSTTLLSDETDDRPKGNTNQETGTSKQLEY 203
Query: 182 AS 183
S
Sbjct: 204 ES 205
>gi|226532758|ref|NP_001147823.1| LOC100281433 [Zea mays]
gi|195613968|gb|ACG28814.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 32/182 (17%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D D T R + ++L C Y+VT ++IL G D++L++V +P
Sbjct: 24 VRILLCDGDATSSREVLRLLCNCAYHVTCAKSPRQVVNILNYEGGEIDIILAEVDLPVSK 83
Query: 94 GFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
FK+L++I DL P+IMMS VS V++ +R GA +YL+KP+R EL N+W HV
Sbjct: 84 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 143
Query: 151 RKR----------WNENKE---------HENSGSL--EETDHHKRG--------SDEIEY 181
R+R +N+N E + NS +L +ETD +G S ++EY
Sbjct: 144 RRRRMLGLPEKNFFNDNFELVLSEPSDANTNSTTLLSDETDDRPKGNTNQETGTSKQLEY 203
Query: 182 AS 183
S
Sbjct: 204 ES 205
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+V+DD + ++ +L+ C Y VT S A +L + + D+VL++V MP +
Sbjct: 73 IKVLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVLEDPENGIDLVLTEVAMPILS 132
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ H L+ ++PVIMMS+ + V + + GA D+L+KPIR ELKN+WQHV
Sbjct: 133 GIGLLCKIMSHKTLK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHV 191
Query: 150 VRK 152
R+
Sbjct: 192 WRR 194
>gi|255079068|ref|XP_002503114.1| predicted protein [Micromonas sp. RCC299]
gi|226518380|gb|ACO64372.1| predicted protein [Micromonas sp. RCC299]
Length = 585
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 57/78 (73%), Gaps = 5/78 (6%)
Query: 211 ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 270
E D K+PR+VW+ LH++FV AV+ LGI AVPK I++LMNV GLTRENVASH
Sbjct: 234 EDDHAHALKRPRLVWTPPLHKRFVDAVSHLGIKNAVPKTIMQLMNVEGLTRENVASH--- 290
Query: 271 INLQKFRLYLKRLNGVSQ 288
LQK+RLYLKRL G S+
Sbjct: 291 --LQKYRLYLKRLQGCSE 306
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 102/186 (54%), Gaps = 21/186 (11%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT + A IL + D+VL++V MP +
Sbjct: 95 LKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVLTEVVMPFIS 154
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ H + ++PVIMMS+ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 155 GIGLLCKIMSHKTFK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHV 213
Query: 150 VRK----------RWNENKEHENSGSLEETDHHKRGSDEIEYAS---SVNEGTE---GTF 193
R+ + K+ S S +E++++ SDE + S S+ +G++ GT
Sbjct: 214 WRRCHSSSGSGSESGTQTKKSVKSKSNDESENNTGSSDERDNGSTGPSIRDGSDNGSGTQ 273
Query: 194 KAQRKR 199
+ KR
Sbjct: 274 SSWTKR 279
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+V+ D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 61 IKVLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 120
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 121 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 180
Query: 151 RK 152
R+
Sbjct: 181 RR 182
>gi|325910796|dbj|BAJ83828.1| circadian response regulator 2a [Physcomitrella patens subsp.
patens]
Length = 915
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 75/117 (64%), Gaps = 6/117 (5%)
Query: 40 DDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLE 99
DDD T ++ +LR C Y VT+ + ++A +L E FD+VL+DV MP + G +L
Sbjct: 190 DDDAT-RHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 100 HIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ L+ + +P+++MS+ ++ V R + GACDYL+KP+R+ ELKN+WQHV RK
Sbjct: 249 KM-LKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRK 304
>gi|356502956|ref|XP_003520280.1| PREDICTED: two-component response regulator ARR14-like [Glycine
max]
Length = 260
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 69/112 (61%), Gaps = 17/112 (15%)
Query: 217 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 276
T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH LQK+
Sbjct: 80 TLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH-----LQKY 134
Query: 277 RLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQTL 328
RLYLKR+ G+S GG+ A T+ L AS +PP L
Sbjct: 135 RLYLKRMQGLSAGGGVGRVASADPTTD------------RLFASSPVPPHFL 174
>gi|323388709|gb|ADX60159.1| pseudoARR-B transcription factor [Zea mays]
gi|413923083|gb|AFW63015.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 32/182 (17%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D D T R + ++L C Y+VT ++IL G D++L++V +P
Sbjct: 24 VRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPVSK 83
Query: 94 GFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
FK+L++I DL P+IMMS VS V++ +R GA +YL+KP+R EL N+W HV
Sbjct: 84 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 143
Query: 151 RKR----------WNENKE---------HENSGSL--EETDHHKRG--------SDEIEY 181
R+R +N+N E + NS +L +ETD +G S ++EY
Sbjct: 144 RRRRMLGLPEKNFFNDNFELVLSEPSDANTNSTTLLSDETDDRPKGNTNQETGTSKQLEY 203
Query: 182 AS 183
S
Sbjct: 204 ES 205
>gi|297736458|emb|CBI25329.3| unnamed protein product [Vitis vinifera]
Length = 769
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + +++ +LR C Y VT + A IL + D+VL++V +P +
Sbjct: 94 LKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEVALPSLS 153
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ H + ++PVIMMS+ V V + + GA D+ +KPIR+ ELKN+WQHV
Sbjct: 154 GIGLLCKIMNHKACK-NIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHV 212
Query: 150 VRK 152
RK
Sbjct: 213 WRK 215
>gi|46981318|gb|AAT07636.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038102|gb|AAT93905.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215769096|dbj|BAH01325.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 620
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 90/155 (58%), Gaps = 11/155 (7%)
Query: 25 AVPD--QFPAG-----LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL-DILRER 76
AVP + PAG L VLVVDDD L L+ ML Y VT + A AL ++ +
Sbjct: 7 AVPPGCKLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNP 66
Query: 77 KGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKP 136
+ F +V++DVHM MDGF LL I +PVIM S V VMR + +GACDY++KP
Sbjct: 67 EDYFHIVMTDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKP 124
Query: 137 IREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
+ E +K IW+HV+R R + + +S SL+ +DH
Sbjct: 125 MTSEAIKFIWKHVLRWRLSALPANASS-SLQPSDH 158
>gi|71067056|dbj|BAE16280.1| NbPCL1 [Nicotiana benthamiana]
Length = 312
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Query: 206 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
DD +S + K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTRENVA
Sbjct: 123 DDSNNKSASKTLNKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVA 182
Query: 266 SHLQEINLQKFRLYLKRLNGVSQQG 290
SH LQK+RLYLKR+ G+S +G
Sbjct: 183 SH-----LQKYRLYLKRMQGLSNEG 202
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT + A L D+VL++V MP +
Sbjct: 77 LKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFLENLSNNVDIVLTEVVMPSLT 136
Query: 94 GFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL+ I M L PVIMMS+ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 137 GIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 196
Query: 151 RK 152
R+
Sbjct: 197 RR 198
>gi|222631501|gb|EEE63633.1| hypothetical protein OsJ_18450 [Oryza sativa Japonica Group]
Length = 633
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 90/155 (58%), Gaps = 11/155 (7%)
Query: 25 AVPD--QFPAG-----LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL-DILRER 76
AVP + PAG L VLVVDDD L L+ ML Y VT + A AL ++ +
Sbjct: 7 AVPPGCKLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNP 66
Query: 77 KGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKP 136
+ F +V++DVHM MDGF LL I +PVIM S V VMR + +GACDY++KP
Sbjct: 67 EDYFHIVMTDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKP 124
Query: 137 IREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
+ E +K IW+HV+R R + + +S SL+ +DH
Sbjct: 125 MTSEAIKFIWKHVLRWRLSALPANASS-SLQPSDH 158
>gi|224124202|ref|XP_002330130.1| pseudo response regulator [Populus trichocarpa]
gi|222871264|gb|EEF08395.1| pseudo response regulator [Populus trichocarpa]
Length = 541
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + + +L +C Y VT+ A +D L D++LS+V +P
Sbjct: 23 SKVRILLCDNDAKSSQEVFTLLLKCSYQVTSVRSARQVIDALNAEGPEIDIILSEVDIPM 82
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G K+L++I + DL PVIMMSA VS V++ +R GA DYL+KP+R EL N+W H
Sbjct: 83 TKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTH 142
Query: 149 VVRKR 153
+ R+R
Sbjct: 143 MWRRR 147
>gi|281308384|gb|ADA58340.1| pseudo-response regulator 3 [Brassica rapa]
Length = 492
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + I+ +L+ C Y VT A +L + C D+VL++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWKVLEDENSCIDLVLTEVVMPVNS 123
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ H L+ ++PVIMMS+ + V + + +GA D+L+KPIR+ ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHQTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 150 VRK 152
R+
Sbjct: 183 WRR 185
>gi|359486449|ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
vinifera]
Length = 747
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + +++ +LR C Y VT + A IL + D+VL++V +P +
Sbjct: 72 LKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEVALPSLS 131
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ H + ++PVIMMS+ V V + + GA D+ +KPIR+ ELKN+WQHV
Sbjct: 132 GIGLLCKIMNHKACK-NIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHV 190
Query: 150 VRK 152
RK
Sbjct: 191 WRK 193
>gi|242062346|ref|XP_002452462.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
gi|241932293|gb|EES05438.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
Length = 524
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D T R + ++L C Y+VT ++IL G D++L++V +P
Sbjct: 32 SKVRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPV 91
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
FK+L++I DL P+IMMS VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 92 SKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTH 151
Query: 149 VVRKR 153
V R+R
Sbjct: 152 VWRRR 156
>gi|168027167|ref|XP_001766102.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
gi|162682745|gb|EDQ69161.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
Length = 1143
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 75/117 (64%), Gaps = 6/117 (5%)
Query: 40 DDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLE 99
DDD T ++ +LR C Y VT+ + ++A +L E FD+VL+DV MP + G +L
Sbjct: 190 DDDAT-RHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 100 HIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ L+ + +P+++MS+ ++ V R + GACDYL+KP+R+ ELKN+WQHV RK
Sbjct: 249 KM-LKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRK 304
>gi|224106431|ref|XP_002314163.1| predicted protein [Populus trichocarpa]
gi|222850571|gb|EEE88118.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 5/74 (6%)
Query: 217 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 276
T K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTRENVASH LQK+
Sbjct: 128 TLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKY 182
Query: 277 RLYLKRLNGVSQQG 290
RLYLKR+ G+S +G
Sbjct: 183 RLYLKRMQGLSSEG 196
>gi|357472859|ref|XP_003606714.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|357472893|ref|XP_003606731.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355507769|gb|AES88911.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355507786|gb|AES88928.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 312
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 7/103 (6%)
Query: 187 EGTEGTFKAQRKRISAKEEDDGELES--DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDK 244
+G+ + RK S EE + E +S T K+PR+VW+ +LH++FV V LGI
Sbjct: 96 DGSGSDSRKHRKIDSVIEEVEAEADSAVRTTETIKRPRLVWTPQLHKRFVDVVAHLGIKN 155
Query: 245 AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVS 287
AVPK I++LMNV GLTRENVASH LQK+RLYLKR+ G+S
Sbjct: 156 AVPKTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLS 193
>gi|195604808|gb|ACG24234.1| two-component response regulator-like PRR73 [Zea mays]
Length = 765
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V M +
Sbjct: 82 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMTCLS 141
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + D+PVIMMS + +S V + + GA D+L+KP+R+ ELKN+WQHV
Sbjct: 142 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 201
Query: 151 RK 152
R+
Sbjct: 202 RR 203
>gi|356542300|ref|XP_003539607.1| PREDICTED: putative two-component response regulator ARR21-like
isoform 1 [Glycine max]
gi|356542302|ref|XP_003539608.1| PREDICTED: putative two-component response regulator ARR21-like
isoform 2 [Glycine max]
Length = 306
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 71/108 (65%), Gaps = 9/108 (8%)
Query: 187 EGTEGTFKAQRK-RISAKEEDDGELESD---DPSTTKKPRVVWSVELHQQFVSAVNQLGI 242
+G+ + QRK EE D + ++ + + K+PR+VW+ +LH++FV V LGI
Sbjct: 106 DGSGSDSRKQRKIDCGVAEEADSAVRTETSAERTAVKRPRLVWTPQLHKRFVDVVAHLGI 165
Query: 243 DKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
AVPK I++LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 166 KNAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSNEG 208
>gi|356504655|ref|XP_003521111.1| PREDICTED: uncharacterized protein LOC100815363 [Glycine max]
Length = 312
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 10/91 (10%)
Query: 201 SAKEEDDGELES----DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMN 255
SA+ D GEL S ++P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+
Sbjct: 87 SAEFADSGELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS 146
Query: 256 VPGLTRENVASHLQEINLQKFRLYLKRLNGV 286
V GLTRENVASH LQK+RLYLKR+ G+
Sbjct: 147 VDGLTRENVASH-----LQKYRLYLKRMQGI 172
>gi|281308394|gb|ADA58345.1| pseudo-response regulator 5b [Brassica rapa]
Length = 628
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 81/131 (61%), Gaps = 12/131 (9%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTC--SQAAV-----ALDILRERKGCFDVVLSD 86
LRVL+V+ D + +I+ +LR+C Y V S AAV A ++LR + D++L++
Sbjct: 112 LRVLLVEADDSTRQIISALLRKCSYRVFPFHFSVAAVPDGLKAWEMLRGKPESVDLILTE 171
Query: 87 VHMPDMDGFKLLEHIGLEMDL----PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
V +P + G+ LL I +E DL PVIMMS V+ V + + GA DYL+KP+R EL
Sbjct: 172 VDLPSISGYALLTLI-MEHDLCKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNEL 230
Query: 143 KNIWQHVVRKR 153
+N+WQHV R++
Sbjct: 231 RNLWQHVWRRQ 241
>gi|224089929|ref|XP_002308869.1| predicted protein [Populus trichocarpa]
gi|222854845|gb|EEE92392.1| predicted protein [Populus trichocarpa]
Length = 318
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 9/82 (10%)
Query: 206 DDGELES----DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 261
D EL S D+P T K+PR+VW+ +LH++FV AV LGI AVPK I++LMNV GLTR
Sbjct: 96 DSSELGSGAAGDEPRTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTR 155
Query: 262 ENVASHLQEINLQKFRLYLKRL 283
ENVASH LQK+RLYLKR+
Sbjct: 156 ENVASH-----LQKYRLYLKRM 172
>gi|357126972|ref|XP_003565161.1| PREDICTED: uncharacterized protein LOC100834697 [Brachypodium
distachyon]
Length = 256
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Query: 206 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
D S+ T+K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTRENVA
Sbjct: 100 DSAAAASELEKTSKRPRMVWNPQLHKRFVDVVAHLGIKSAVPKTIMQLMNVEGLTRENVA 159
Query: 266 SHLQEINLQKFRLYLKRLNGVSQQG 290
SH LQK+RLY+KR+ G+S +G
Sbjct: 160 SH-----LQKYRLYVKRMQGLSNEG 179
>gi|444434895|dbj|BAM77022.1| PHYTOCLOCK 1 [Triticum monococcum subsp. aegilopoides]
Length = 285
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 12/107 (11%)
Query: 191 GTFKAQRKRISAKEEDDG-------ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID 243
G+F + + +A ED G E + + TK+ R+VW+ +LH++FV V LGI
Sbjct: 100 GSFPSFPGKGAAAGEDSGNRDNNSAESAGEKAAATKRARLVWTPQLHKRFVEVVAHLGIK 159
Query: 244 KAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
AVPK I++LMNV GLTRENVASH LQK+RLY+KR+ G+S +G
Sbjct: 160 SAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYVKRMQGLSNEG 201
>gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa]
gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa]
Length = 717
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 98/176 (55%), Gaps = 14/176 (7%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L VL+V+ D + +I+ +LR+C Y V +A + L+ D++L++V +P +
Sbjct: 44 LSVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGGPHNIDLILTEVELPLIS 103
Query: 94 GFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G+ LL EH + ++PVIMMS+ +S V++ + GA D+LIKP+R+ EL+N+WQHV
Sbjct: 104 GYALLTLVTEH-AVCKNIPVIMMSSQDSISMVLKCMLKGAADFLIKPVRKNELRNLWQHV 162
Query: 150 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 205
R ++ ++G + + H S EI AS+ G+ + + RK E+
Sbjct: 163 WR------RQTLSAGQIPQNLHKVEASSEINAASN---GSSDSVMSSRKNKDCSEK 209
>gi|125552239|gb|EAY97948.1| hypothetical protein OsI_19866 [Oryza sativa Indica Group]
Length = 604
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 90/155 (58%), Gaps = 11/155 (7%)
Query: 25 AVPD--QFPAG-----LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL-DILRER 76
AVP + PAG L VLVVDDD L L+ ML Y VT + A AL ++ +
Sbjct: 7 AVPPGCKLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNP 66
Query: 77 KGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKP 136
+ F +V++DVHM MDGF LL I +PVIM S V VMR + +GACDY++KP
Sbjct: 67 EDYFHIVMTDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKP 124
Query: 137 IREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 171
+ E +K IW+HV+R R + + +S SL+ +DH
Sbjct: 125 MTSEAIKFIWKHVLRWRLSALPANASS-SLQPSDH 158
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 102/186 (54%), Gaps = 21/186 (11%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT + A IL + D+VL++V MP +
Sbjct: 95 LKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVLTEVVMPFIS 154
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K++ H + ++PVIMMS+ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 155 GIGLLCKIMSHKTFK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHV 213
Query: 150 VRK----------RWNENKEHENSGSLEETDHHKRGSDEIEYAS---SVNEGTE---GTF 193
R+ + K+ S S +E++++ SDE + S S+ +G++ GT
Sbjct: 214 WRRCHSSSGSGSESGTQTKKSVKSKSNDESENNTGSSDERDNGSTGPSIRDGSDNGSGTQ 273
Query: 194 KAQRKR 199
+ KR
Sbjct: 274 SSWTKR 279
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L VL+V+ D + +++ +LR C+Y V + A L +++ D+VL++V MP +
Sbjct: 51 LNVLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYLEDKRNNIDLVLTEVFMPGVS 110
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS+ +S V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 111 GISLLSRIMSHNICKNIPVIMMSSSDAMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 170
Query: 151 RKR 153
R+R
Sbjct: 171 RQR 173
>gi|356508533|ref|XP_003523010.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 560
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D + + +L RC Y VT+ A +D L D++L+++ +P
Sbjct: 30 VRILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHIDIILAELDLPMKK 89
Query: 94 GFKLLEHIGLEMD---LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G K+L++I + + +PVIMMSA VS V++ +R GA DYL+KP+R EL N+W H+
Sbjct: 90 GMKMLKYIAQDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 149
Query: 151 RKR 153
R+R
Sbjct: 150 RRR 152
>gi|147820325|emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera]
Length = 306
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 10/88 (11%)
Query: 201 SAKEEDDGELES----DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMN 255
SA E D G+L S D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+
Sbjct: 68 SAPEFDSGDLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS 127
Query: 256 VPGLTRENVASHLQEINLQKFRLYLKRL 283
V GLTRENVASH LQK+RLYLKR+
Sbjct: 128 VDGLTRENVASH-----LQKYRLYLKRM 150
>gi|351722597|ref|NP_001235202.1| timing of CAB expression 1 [Glycine max]
gi|158999372|gb|ABW87010.1| timing of CAB expression 1 [Glycine max]
Length = 558
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D + + +L RC Y VT+ A +D L D++L+++ +P
Sbjct: 28 VRILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHIDIILAELDLPMKK 87
Query: 94 GFKLLEHIGLEMD---LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G K+L++I + + +PVIMMSA VS V++ +R GA DYL+KP+R EL N+W H+
Sbjct: 88 GMKMLKYIARDKEFRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 147
Query: 151 RKR 153
R+R
Sbjct: 148 RRR 150
>gi|326522564|dbj|BAK07744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 759
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D ++ +LR+C Y V + A L + + D+VL++V MP +
Sbjct: 83 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 142
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + +PVIMMS + +S V + + GA D+L+KPIR+ ELK +WQH+
Sbjct: 143 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 202
Query: 151 RK 152
R+
Sbjct: 203 RR 204
>gi|308913672|gb|ADO51646.1| TOC1b [Zea mays]
Length = 488
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + R + ++L C Y+VT ++IL G D++L++V +P
Sbjct: 26 SKVRILLCDGDASSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPV 85
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
FK+L++I DL P+IMMS VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 86 SKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTH 145
Query: 149 VVRKR 153
V R+R
Sbjct: 146 VWRRR 150
>gi|224098134|ref|XP_002311124.1| predicted protein [Populus trichocarpa]
gi|222850944|gb|EEE88491.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT S A +L++ D+VL++V MP +
Sbjct: 37 LKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEVAMPCLS 96
Query: 94 GFKLLEHIGLEM---DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I ++PVIMMS+ ++ V + + GA D+L+KPIR+ ELK +WQHV
Sbjct: 97 GIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKILWQHVW 156
Query: 151 RK 152
RK
Sbjct: 157 RK 158
>gi|224098126|ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
gi|222850943|gb|EEE88490.1| pseudo response regulator [Populus trichocarpa]
Length = 766
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT S A +L++ D+VL++V MP +
Sbjct: 92 LKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEVAMPCLS 151
Query: 94 GFKLLEHIGLEM---DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I ++PVIMMS+ ++ V + + GA D+L+KPIR+ ELK +WQHV
Sbjct: 152 GIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKILWQHVW 211
Query: 151 RK 152
RK
Sbjct: 212 RK 213
>gi|225440143|ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256764 isoform 1 [Vitis
vinifera]
gi|359481436|ref|XP_003632618.1| PREDICTED: uncharacterized protein LOC100256764 isoform 2 [Vitis
vinifera]
Length = 306
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 10/88 (11%)
Query: 201 SAKEEDDGELES----DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMN 255
SA E D G+L S D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+
Sbjct: 68 SAPEFDSGDLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS 127
Query: 256 VPGLTRENVASHLQEINLQKFRLYLKRL 283
V GLTRENVASH LQK+RLYLKR+
Sbjct: 128 VDGLTRENVASH-----LQKYRLYLKRM 150
>gi|334715197|gb|AEG90654.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 291
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + ++PVIMMS++ + V + + GA D+L+ PIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 151 RK 152
R+
Sbjct: 200 RR 201
>gi|224059460|ref|XP_002299857.1| predicted protein [Populus trichocarpa]
gi|222847115|gb|EEE84662.1| predicted protein [Populus trichocarpa]
Length = 186
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 68/111 (61%), Gaps = 10/111 (9%)
Query: 185 VNEGTEGTFKAQRKRISAKEEDDGELESDDPS-----TTKKPRVVWSVELHQQFVSAVNQ 239
+N + FK+ + A E DDPS T K+PR+VW+ +LH++FV V
Sbjct: 62 LNALSSNNFKSFNETTEADSALRTENWVDDPSSAAARTLKRPRLVWTPQLHKRFVDVVGH 121
Query: 240 LGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
LG+ AVPK I++ MNV GLTRENVASH LQK+RLYLKR G+S +G
Sbjct: 122 LGMKNAVPKTIMQWMNVEGLTRENVASH-----LQKYRLYLKRKQGLSSEG 167
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 16/166 (9%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y V + A IL + D+VL++V MP +
Sbjct: 74 LKVLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKILEDMNNHTDLVLTEVVMPILS 133
Query: 94 GFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL H L ++PVIMMS+ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 134 GIGLLCKIRNHKTLR-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHV 192
Query: 150 VRK----------RWNENKEHENSGSLEETDHHKRGSDEI-EYASS 184
R+ + K+ + S EE++++ SDE+ +Y S+
Sbjct: 193 WRRCHSSSGSGSESGTQTKKSAKTKSNEESENNSDSSDELGDYGSN 238
>gi|224144059|ref|XP_002336105.1| predicted protein [Populus trichocarpa]
gi|222872755|gb|EEF09886.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 62/83 (74%), Gaps = 10/83 (12%)
Query: 206 DDGELES----DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 260
D GEL S D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LMNV GLT
Sbjct: 93 DSGELGSGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLT 152
Query: 261 RENVASHLQEINLQKFRLYLKRL 283
RENVASH LQK+RLYLKR+
Sbjct: 153 RENVASH-----LQKYRLYLKRM 170
>gi|255568450|ref|XP_002525199.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223535496|gb|EEF37165.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 762
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y V + A IL + D+VL++V MP +
Sbjct: 88 LKVLLVENDYSTRHVVTALLRNCSYEVIEATNGLQAWRILEDLTNQIDLVLTEVVMPCLS 147
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I ++PVIMMS+ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 148 GIGLLYKIMSHKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 207
Query: 151 RK 152
R+
Sbjct: 208 RR 209
>gi|255547335|ref|XP_002514725.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223546329|gb|EEF47831.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 550
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + +L +C Y VT+ A +D L D++LS+V +P
Sbjct: 20 SKVRILLCDNDSKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGPDIDIILSEVDLPM 79
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G K+L++I + +L PVIMMSA VS V++ +R GA DYL+KP+R EL N+W H
Sbjct: 80 NKGMKMLKYITRDKELRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTH 139
Query: 149 VVRKR 153
+ R+R
Sbjct: 140 MWRRR 144
>gi|375126877|gb|AFA35965.1| timing of cab expression 1/pseudo-response regulator 1 [Nicotiana
attenuata]
Length = 551
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 24/213 (11%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + + +L +C Y VT+ +D L D++LS+V +P
Sbjct: 17 SKVRILLCDKDAKSSQEVFTLLCKCSYQVTSARSPRQVIDALNAEGPEIDIILSEVDLPM 76
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G+K+L++I + +L PVIMMSA VS V++ ++ GA DYL+KP+R EL N+W H
Sbjct: 77 SKGYKMLKYIMRDKELRRIPVIMMSAQDEVSIVVKCLKFGAADYLVKPLRTNELLNLWTH 136
Query: 149 VVRKRW-------------------NENKEHENSGSL--EETDHHKRGSDEIEYASSVNE 187
+ R+R + + + NS +L ++TD R S +E S+ +
Sbjct: 137 MWRRRQMLGLAEKNILSYDFDLVVSDPSDPNTNSTTLFSDDTDDRSRKSVNLEACPSIQQ 196
Query: 188 GTEGTFKAQRKRISAKEEDDGELESDDPSTTKK 220
E + I E +SD P T ++
Sbjct: 197 EDEVSASTTAAHIETTHVFPSECQSDVPGTNER 229
>gi|242060063|ref|XP_002459177.1| hypothetical protein SORBIDRAFT_03g047330 [Sorghum bicolor]
gi|241931152|gb|EES04297.1| hypothetical protein SORBIDRAFT_03g047330 [Sorghum bicolor]
Length = 284
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 5/73 (6%)
Query: 218 TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 277
+K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTRENVASH LQK+R
Sbjct: 141 SKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKYR 195
Query: 278 LYLKRLNGVSQQG 290
LY+KR+ G+S +G
Sbjct: 196 LYVKRMQGLSNEG 208
>gi|356513521|ref|XP_003525462.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 559
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + +L C Y VT+ A +D L D++L++V +P
Sbjct: 35 SKVRILLCDNDSKSSEEVFALLLGCSYQVTSVRSARQVIDALNAEGQYIDIILAEVDLPI 94
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G KLL++I + +L PVIMMSA VS V++ +R GA DYL+KP+R EL N+W H
Sbjct: 95 KKGMKLLKYIARDKELCRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTH 154
Query: 149 VVRKR 153
+ R+R
Sbjct: 155 MWRRR 159
>gi|297810367|ref|XP_002873067.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
gi|297318904|gb|EFH49326.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
Length = 733
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V++D I+ +LR C Y V S A +L + D+VL++V MP +
Sbjct: 85 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 144
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I ++PVIMMS+ + V + + GA D+L+KPIR+ ELK +WQHV
Sbjct: 145 GISLLSKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 204
Query: 151 RK-----------RWNENKEHENSGSLEETDHHKRGSDEIEYAS 183
R+ ++ ++ S S+ ++DH R S E E S
Sbjct: 205 RRCQSSSGSGSESGTHQTQKSVKSKSIRKSDHDSRSSGENENGS 248
>gi|326523357|dbj|BAJ88719.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 69/109 (63%), Gaps = 12/109 (11%)
Query: 189 TEGTFKAQRKRISAKEED-------DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG 241
T G+F + + SA +D + E + TK+ R+VW+ +LH++FV V LG
Sbjct: 90 TGGSFPSFPGKSSAAGDDNNNNSSAESAGEKSAAAATKRARLVWTPQLHKRFVEVVAHLG 149
Query: 242 IDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
I AVPK I++LMNV GLTRENVASH LQK+RLY+KR+ G+S +G
Sbjct: 150 IKSAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYVKRMQGLSNEG 193
>gi|255552463|ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis]
gi|223543538|gb|EEF45068.1| DNA binding protein, putative [Ricinus communis]
Length = 315
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 60/76 (78%), Gaps = 6/76 (7%)
Query: 213 DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 271
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 96 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 151
Query: 272 NLQKFRLYLKRLNGVS 287
LQK+RLYLKR+ G+S
Sbjct: 152 -LQKYRLYLKRMQGLS 166
>gi|319657108|gb|ADV58932.1| pseudo-response regulator 7-like protein [Beta vulgaris subsp.
vulgaris]
Length = 718
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V++D + ++ +LR C Y V S A IL + + D+VL++V MP +
Sbjct: 84 VRVLLVENDDSTRHVVAALLRNCCYEVVEASNGLQAWKILEDIENRIDLVLTEVVMPCVS 143
Query: 94 G----FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G FK++ H + ++PV+MMS+ + V + + GA D+L+KPIR+ ELKN+WQH+
Sbjct: 144 GIALLFKIMSHKSRK-NVPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHL 202
Query: 150 VRK 152
R+
Sbjct: 203 WRR 205
>gi|413934855|gb|AFW69406.1| putative two-component response regulator family protein [Zea mays]
Length = 790
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 136/286 (47%), Gaps = 31/286 (10%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR---ERKGCFDVVLSDVHMP 90
L LV+D D L + + L + + V + A ALD ++ + D+VL +V++
Sbjct: 5 LSALVLDGDPASLSTISETLAKFNFRVVSFQTAEAALDFIKCGAAKAADLDLVLVEVNLN 64
Query: 91 DMD-----GFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
+M L HI E+ +P+ M + A+ + + GAC +L+KP+ +
Sbjct: 65 NMAPGTSANPDLFHHILNELQVPLTAMCSRDDEEALSKCMNLGACFHLLKPLNRRSFSIL 124
Query: 146 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 205
W + + K SL ++ ++ S E V +R +S +
Sbjct: 125 WHQALEHK--SKKAAPQRPSLNDSTKNRMVSPSTEKPKEV-------LILERNNLSVPQS 175
Query: 206 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDK-AVPKRILELMNVPGLTRENV 264
+ E +P K+ RV W++ELH++F+ AV LG +K A P++IL LMNV GLT +++
Sbjct: 176 NGYE----EPK--KQNRVTWTIELHEKFLEAVEALGGNKSARPEKILHLMNVKGLTVKHI 229
Query: 265 ASHLQEINL--QKFRLYLKRLNG----VSQQGGITNSFCAP-IETN 303
SHLQ+ L Q + ++ N +S+QG T+ P +ET+
Sbjct: 230 GSHLQKHRLRNQNTKQGQRQENASRKPISRQGEATSESITPRVETD 275
>gi|157399678|gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
Length = 784
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT A IL + D+VL++V MP +
Sbjct: 98 LKVLLVENDDSTRHVVSALLRNCGYEVTAAENGLQAWKILEDYTTHVDLVLTEVVMPCLS 157
Query: 94 GFKLLEHIGLEM---DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I ++PVIMMS+ ++ V + + GA D+L KPIR+ ELKN+WQHV
Sbjct: 158 GIGLLSKIMSHKTCKNIPVIMMSSYDSMNIVFKCLSKGAVDFLAKPIRKNELKNLWQHVW 217
Query: 151 RK 152
RK
Sbjct: 218 RK 219
>gi|15240235|ref|NP_200946.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
gi|52783243|sp|Q9LKL2.1|APRR1_ARATH RecName: Full=Two-component response regulator-like APRR1; AltName:
Full=ABI3-interacting protein 1; AltName:
Full=Pseudo-response regulator 1; AltName: Full=Timing
of CAB expression 1
gi|9247020|gb|AAF86252.1|AF272039_1 timing of CAB expression 1 protein [Arabidopsis thaliana]
gi|7576354|dbj|BAA94547.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|9757859|dbj|BAB08493.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|20453054|gb|AAM19772.1| AT5g61380/mfb13_150 [Arabidopsis thaliana]
gi|29028744|gb|AAO64751.1| At5g61380/mfb13_150 [Arabidopsis thaliana]
gi|332010077|gb|AED97460.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
Length = 618
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D T L + +L C Y VT A +D L D++L+++ +P
Sbjct: 19 VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 94 GFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G K+L +I + DL PVIMMS V V++ ++ GA DYL+KP+R EL N+W H+
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 138
Query: 151 RKR 153
R+R
Sbjct: 139 RRR 141
>gi|356545957|ref|XP_003541399.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 749
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+ D + ++ +LR C Y V + A IL + D++L++V MP +
Sbjct: 81 LKVLLVEYDDSTRHVVTALLRNCSYEVIDAANGLQAWKILEDLTNHIDLILTEVAMPGLS 140
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I ++PV+MMS+ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 151 RK 152
R+
Sbjct: 201 RR 202
>gi|449486993|ref|XP_004157464.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR1-like [Cucumis sativus]
Length = 557
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 9 QSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAV 68
+ GG G G D + D+ + +R+L+ D+D + ++L +C Y V + S A
Sbjct: 10 EDCGGCGSGGKNXGDGFI-DR--SKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQ 66
Query: 69 ALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGI 125
+D L D++LS+V +P G K+L++I + +L PVIMMS V V++ +
Sbjct: 67 VIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCL 126
Query: 126 RHGACDYLIKPIREEELKNIWQHVVRKR 153
R GA DYL+KP+R EL N+W H+ R+R
Sbjct: 127 RLGAADYLVKPLRTNELLNLWTHMWRRR 154
>gi|356559647|ref|XP_003548110.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 706
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 79/124 (63%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C+ V A + L+++ D++L++V +P +
Sbjct: 32 LRVLLVEADHSTRQIIAALLRKCIIAVP---DGLKAWETLKKKASELDLILTEVELPAIS 88
Query: 94 GFKLLEHIGLEMDL----PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
GF LL I +E D+ PVIMMS+ V+ ++ + +GA D+LIKPIR+ EL+N+WQHV
Sbjct: 89 GFALLSLI-MEHDICKSIPVIMMSSHDSVNMALKCMLNGAVDFLIKPIRKNELRNLWQHV 147
Query: 150 VRKR 153
R+
Sbjct: 148 WRRH 151
>gi|303271521|ref|XP_003055122.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
gi|226463096|gb|EEH60374.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
Length = 1334
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 25/188 (13%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+VDD +LRRC Y VTT S A+ +L ER F+++L+DV MPD+D
Sbjct: 10 VHVLLVDD--------AGLLRRCQYQVTTASSGREAMALL-ERGTQFNLLLTDVMMPDVD 60
Query: 94 GFKLLEHIG---LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL + L ++PV+MMS++ VM IR GA DY+IKP+ + +K++W HV
Sbjct: 61 GPTLLHFVRNNPLYAEMPVVMMSSNEHADMVMNCIRLGAEDYIIKPVTNKAVKHMWAHVW 120
Query: 151 RK--RWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEG--TFKAQRKRISAKEED 206
R+ R+ EN ++E E E+ ++ E G +A + EE
Sbjct: 121 RRKQRYQMVPRFENGREVDE---------EREFEAAAMEELRGGVDLEAGMLPVPETEEY 171
Query: 207 DGELESDD 214
+ ESDD
Sbjct: 172 SSDGESDD 179
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 94.4 bits (233), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/122 (39%), Positives = 73/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL---RERKGCFDVVLSDVHMP 90
VL+V+DD L+ +EQ+LR+C Y VT + A+ +L R D++L+D+ MP
Sbjct: 3 FHVLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVLTACRHSGVKVDLILTDILMP 62
Query: 91 DMDGFKLLE---HIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
++ GF L+ H D+PV++MS+ V++ + GA DYLIKPIR+ EL +WQ
Sbjct: 63 EVTGFDLINEVVHGDTFCDVPVVVMSSQDSQENVLQAFQAGAADYLIKPIRKNELATLWQ 122
Query: 148 HV 149
HV
Sbjct: 123 HV 124
>gi|168009287|ref|XP_001757337.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691460|gb|EDQ77822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 79/136 (58%), Gaps = 15/136 (11%)
Query: 158 KEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD---GELESDD 214
+EH+++G + E+ + DE G+ RK + ED G L + +
Sbjct: 74 QEHDDAGKVPESSYGGPREDESSRGG-------GSTDFGRKMADFELEDANSAGGLMNSN 126
Query: 215 PSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 274
K+ R+VW+ +LH++FV AV LGI AVPK I++LMNV GLTRENVASH LQ
Sbjct: 127 DEPLKRARLVWTPQLHKRFVEAVGHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQ 181
Query: 275 KFRLYLKRLNGVSQQG 290
K+RLYLKR+ G+S G
Sbjct: 182 KYRLYLKRMQGLSNDG 197
>gi|356536913|ref|XP_003536977.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 747
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+ D + ++ +LR C Y V + A IL + D+VL++V MP +
Sbjct: 79 LKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEVAMPGLS 138
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I ++PV+MMS+ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 139 GIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 198
Query: 151 RK 152
R+
Sbjct: 199 RR 200
>gi|302813242|ref|XP_002988307.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
gi|300144039|gb|EFJ10726.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
Length = 508
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D D + ++++L RC Y V+ A +++L D+VLS+V +P+
Sbjct: 14 VRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVELPNGR 73
Query: 94 GFKLLEHIGLEMD---LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
GFK+L+HI + +P++MMSA ++ V++ ++ GA DYL+KP+R EL N+W H+
Sbjct: 74 GFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNLWTHMW 133
Query: 151 RKR 153
R+R
Sbjct: 134 RRR 136
>gi|302760961|ref|XP_002963903.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
gi|300169171|gb|EFJ35774.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
Length = 505
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D D + ++++L RC Y V+ A +++L D+VLS+V +P+
Sbjct: 14 VRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVELPNGR 73
Query: 94 GFKLLEHIGLEMD---LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
GFK+L+HI + +P++MMSA ++ V++ ++ GA DYL+KP+R EL N+W H+
Sbjct: 74 GFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNLWTHMW 133
Query: 151 RKR 153
R+R
Sbjct: 134 RRR 136
>gi|449437694|ref|XP_004136626.1| PREDICTED: uncharacterized protein LOC101216059 [Cucumis sativus]
gi|449533272|ref|XP_004173600.1| PREDICTED: uncharacterized LOC101216059 [Cucumis sativus]
Length = 286
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 9/87 (10%)
Query: 201 SAKEEDDGELES---DDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNV 256
SA D G+L S D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V
Sbjct: 66 SADFADSGDLGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSV 125
Query: 257 PGLTRENVASHLQEINLQKFRLYLKRL 283
GLTRENVASH LQK+RLYLKR+
Sbjct: 126 DGLTRENVASH-----LQKYRLYLKRM 147
>gi|295913732|gb|ADG58105.1| transcription factor [Lycoris longituba]
Length = 230
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 57/72 (79%), Gaps = 5/72 (6%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTR+NVASH LQK+RL
Sbjct: 124 KRPRLVWTPQLHKRFVEVVAHLGIKNAVPKTIVQLMNVEGLTRDNVASH-----LQKYRL 178
Query: 279 YLKRLNGVSQQG 290
YLKR++G+S +G
Sbjct: 179 YLKRMSGLSNEG 190
>gi|413949280|gb|AFW81929.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 299
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 58/72 (80%), Gaps = 6/72 (8%)
Query: 213 DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 271
D+P+ T K+PR+VW+ +LH++FV AV QLGI AVPK I++LM+V GLTRENVASH
Sbjct: 79 DEPARTLKRPRLVWTPQLHKRFVDAVAQLGIKNAVPKTIMQLMSVDGLTRENVASH---- 134
Query: 272 NLQKFRLYLKRL 283
LQK+RLYLKR+
Sbjct: 135 -LQKYRLYLKRM 145
>gi|226875203|gb|ACO88949.1| cytokinin B-type response regulator 6 [Vitis vinifera]
Length = 58
Score = 93.6 bits (231), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/58 (70%), Positives = 47/58 (81%)
Query: 45 CLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIG 102
CL ILE+MLR CLY VT C++A AL +LR K FD+V+SDVHMPDMDGFKLLEHIG
Sbjct: 1 CLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDVHMPDMDGFKLLEHIG 58
>gi|85860540|ref|YP_462742.1| sigma-54-dependent transcriptional regulator [Syntrophus
aciditrophicus SB]
gi|85723631|gb|ABC78574.1| sigma-54-dependent transcriptional regulator [Syntrophus
aciditrophicus SB]
Length = 443
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R++V+DDD L++ LRR Y+V C+ A D+L+ +D+V+SD+ MPDMD
Sbjct: 3 IRIIVIDDDAVACEFLQEALRRADYDVDICTSAR---DVLKGDLSRYDLVISDIRMPDMD 59
Query: 94 GFKLLEHIGLEMD-LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
G +LL I + LPVI+M+A G + + M ++ GA DY+ KP E ++N+ + V+
Sbjct: 60 GLQLLRRIHQQWPALPVILMTAYGSLESTMEALQLGAWDYISKPFSPEAIRNMVKKVLGM 119
Query: 153 RWNENKEHENSGSLEETD 170
R E + H + GS E +
Sbjct: 120 R--ELQRHRSQGSPAEKE 135
>gi|449524812|ref|XP_004169415.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 794
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y V + A +L + D+VL++V MP +
Sbjct: 89 LKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLS 148
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I ++PVIMMS+ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 149 GIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 208
Query: 151 RK 152
R+
Sbjct: 209 RR 210
>gi|224112925|ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
gi|222865373|gb|EEF02504.1| pseudo response regulator [Populus trichocarpa]
Length = 763
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y T + A +L++ D+VL++V MP +
Sbjct: 89 LKVLLVENDDSTRHVVSALLRNCGYEATAVANGLQAWKLLQDLTNHIDLVLTEVAMPCLS 148
Query: 94 GFKLLEHIGLEM---DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL +I ++PVIMMS+ ++ V R + GA D+L+KPIR+ ELK +WQHV
Sbjct: 149 GIGLLSNIMSHKTCRNIPVIMMSSHDSMNVVFRCLSKGAVDFLVKPIRKNELKILWQHVW 208
Query: 151 RK 152
R+
Sbjct: 209 RR 210
>gi|297793691|ref|XP_002864730.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
gi|297310565|gb|EFH40989.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
Length = 623
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D L + +L C Y VT+ A +D L D++L+++ +P
Sbjct: 19 VRILLCDNDSKSLGEVFTLLSECSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 94 GFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G K+L +I + DL PVIMMS V V++ ++ GA DYL+KP+R EL N+W H+
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 138
Query: 151 RKR 153
R+R
Sbjct: 139 RRR 141
>gi|34499879|gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crystallinum]
Length = 544
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + +L C Y VT A +D L D++LS+V +P
Sbjct: 27 SKVRILLCDNDSKSCEEVFGLLSNCSYQVTAVRSARQVIDALNAEGPDIDIILSEVDLPT 86
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G K+L++I + DL PVIMMS VS V++ +R GA DYL+KP+R E+ N+W H
Sbjct: 87 KKGLKMLKYIMRDRDLQRIPVIMMSTQDEVSLVVKCLRLGAADYLVKPLRTNEMLNLWTH 146
Query: 149 VVRKR 153
+ R+R
Sbjct: 147 MWRRR 151
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 79/127 (62%), Gaps = 4/127 (3%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR-ERKGCFDVVLSDVHM 89
P+ VL+VDD+ +L +L +C Y VT+ S AL +LR F +VL+DV M
Sbjct: 45 PSSCHVLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLLRGSAPDTFQLVLTDVCM 104
Query: 90 PDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
P+++G +LL + + +L PV+MMS+ + V ++ GA +YL+KP+ ++E+++IW
Sbjct: 105 PELNGIQLLSCVKQDANLRAVPVVMMSSVDQEETVAECVQQGAEEYLVKPVTKKEVQHIW 164
Query: 147 QHVVRKR 153
QHV RKR
Sbjct: 165 QHVWRKR 171
>gi|51571875|dbj|BAD38854.1| pseudo-response regulator 1 [Oryza sativa Japonica Group]
Length = 518
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + R + ++L C Y VT +++L G D++L++V +P
Sbjct: 26 SKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPV 85
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
FK+L++I +L P+IMMS VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 86 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 145
Query: 149 VVRKR 153
V R+R
Sbjct: 146 VWRRR 150
>gi|357509257|ref|XP_003624917.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|124361203|gb|ABN09175.1| Homeodomain-related [Medicago truncatula]
gi|355499932|gb|AES81135.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 299
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 10/86 (11%)
Query: 206 DDGELES----DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 260
D EL S ++P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLT
Sbjct: 72 DSTELTSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLT 131
Query: 261 RENVASHLQEINLQKFRLYLKRLNGV 286
RENVASH LQK+RLYLKR+ G+
Sbjct: 132 RENVASH-----LQKYRLYLKRMQGI 152
>gi|240254335|ref|NP_176988.4| pseudo-response regulator 6 [Arabidopsis thaliana]
gi|363548390|sp|Q9C9F6.2|APRR6_ARATH RecName: Full=Putative two-component response regulator-like APRR6;
AltName: Full=Pseudo-response regulator 6
gi|332196644|gb|AEE34765.1| pseudo-response regulator 6 [Arabidopsis thaliana]
Length = 755
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 131/265 (49%), Gaps = 25/265 (9%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ +L++D D + L ML++ V + A+ AL ++ ++K ++++++ MP +D
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 94 GFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
L + L+ D+P+I+++ + + + AC L KPI +++KN+WQHV K+
Sbjct: 73 SHSFLNALLLK-DIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSKK 131
Query: 154 WNENKE---HENSGSLEETDHHKRGS-------DEIEYASSVNE----GTEGTFKAQRKR 199
E K+ E+ ++ + D ++ + I AS + T T++ +KR
Sbjct: 132 SQELKKINITEDQENVMDKDTYQIEAFRANLKRQRISQASLLGRRPFIDTFSTYETFQKR 191
Query: 200 -----ISAKEEDDGELESDDPSTTKKPRV-----VWSVELHQQFVSAVNQLGIDKAVPKR 249
+ K +E ++ K V +W+ E H +F++A++ LG + PK
Sbjct: 192 KSIANVEWKTTPSYAIEIENKRKEWKKSVGRRKSLWNSERHMKFIAAISILGEEDFRPKS 251
Query: 250 ILELMNVPGLTRENVASHLQEINLQ 274
ILE+MN P LT V SHLQ+ Q
Sbjct: 252 ILEIMNDPNLTHRQVGSHLQKYKAQ 276
>gi|449532655|ref|XP_004173296.1| PREDICTED: uncharacterized protein LOC101223526, partial [Cucumis
sativus]
Length = 285
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 6/73 (8%)
Query: 212 SDDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 270
SD+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 72 SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH--- 128
Query: 271 INLQKFRLYLKRL 283
LQK+RLYLKR+
Sbjct: 129 --LQKYRLYLKRM 139
>gi|359491315|ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis
vinifera]
Length = 556
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + +L C Y VT+ A +D L D++L++V +P
Sbjct: 25 SNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEVDLPM 84
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G K+L++I + +L P+IMMSA VS V++ +R GA DYL+KP+R EL N+W H
Sbjct: 85 TKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 144
Query: 149 VVRKR 153
+ R+R
Sbjct: 145 MWRRR 149
>gi|330794882|ref|XP_003285505.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
gi|325084508|gb|EGC37934.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
Length = 729
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P+ +R+LVVDDD ++LE +L++ YNVT S +A D + + +D+VL+DV MP
Sbjct: 106 PSKVRILVVDDDDVQRKVLENLLKKFHYNVTLVSNGEIAWDNISSGQQKYDLVLTDVMMP 165
Query: 91 DMDGFKLLEHIG---LEMDLPVIMMSADG-RVSAVMRGIRHGACDYLIKPIREEELKNIW 146
+ GF LL+ I + ++PVI+MS I+ G D+L KPI +E LK
Sbjct: 166 HITGFDLLQRINDHPIYKNIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKI 225
Query: 147 QHVVRKRWNENKEHENSGSL-EETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 204
V++ W KE E SL +E + R + E+E +E E T K + +KE
Sbjct: 226 DTVLQSIWQRKKEEEYKASLAQEREKGTRLAKEMELKE--HEIEELTKKVSKMSTISKE 282
>gi|297806505|ref|XP_002871136.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297316973|gb|EFH47395.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 59/79 (74%), Gaps = 6/79 (7%)
Query: 208 GELESDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 266
G+ D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVAS
Sbjct: 67 GDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVAS 126
Query: 267 HLQEINLQKFRLYLKRLNG 285
H LQK+RLYLKR+
Sbjct: 127 H-----LQKYRLYLKRMQS 140
>gi|115447337|ref|NP_001047448.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|68565719|sp|Q689G9.2|PRR1_ORYSJ RecName: Full=Two-component response regulator-like PRR1; AltName:
Full=Pseudo-response regulator 1; Short=OsPRR1
gi|47847546|dbj|BAD21598.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|47847675|dbj|BAD21456.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|113536979|dbj|BAF09362.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|222623253|gb|EEE57385.1| hypothetical protein OsJ_07546 [Oryza sativa Japonica Group]
Length = 518
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + R + ++L C Y VT +++L G D++L++V +P
Sbjct: 26 SKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPV 85
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
FK+L++I +L P+IMMS VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 86 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 145
Query: 149 VVRKR 153
V R+R
Sbjct: 146 VWRRR 150
>gi|218191182|gb|EEC73609.1| hypothetical protein OsI_08092 [Oryza sativa Indica Group]
Length = 518
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + R + ++L C Y VT +++L G D++L++V +P
Sbjct: 26 SKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPV 85
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
FK+L++I +L P+IMMS VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 86 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 145
Query: 149 VVRKR 153
V R+R
Sbjct: 146 VWRRR 150
>gi|444434897|dbj|BAM77023.1| PHYTOCLOCK 1 [Triticum monococcum subsp. monococcum]
Length = 285
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 67/107 (62%), Gaps = 12/107 (11%)
Query: 191 GTFKAQRKRISAKEEDDG-------ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID 243
G+F + + A ED G E + + TK+ R+VW+ +LH++FV V LGI
Sbjct: 100 GSFPSFPGKGEAAGEDSGNRDNNSAESAGEKAAATKRARLVWTPQLHKRFVEVVAHLGIK 159
Query: 244 KAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 290
AVPK I++LMNV GLTRENVASH LQK+RLY+KR+ +S +G
Sbjct: 160 SAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYVKRMQCLSNEG 201
>gi|281308382|gb|ADA58339.1| pseudo-response regulator 1a [Brassica rapa]
Length = 576
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D L + +L +C Y VT+ A +D L D++L+++ +P
Sbjct: 21 VRILLCDNDPNSLGEVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAK 80
Query: 94 GFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G K+L +I + DL PVIMMS V V++ ++ GA DYL+KP+R EL N+W H+
Sbjct: 81 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 140
Query: 151 RKR 153
R+R
Sbjct: 141 RRR 143
>gi|449439291|ref|XP_004137419.1| PREDICTED: two-component response regulator-like APRR1-like
[Cucumis sativus]
Length = 557
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + ++L +C Y V + S A +D L D++LS+V +P
Sbjct: 30 SKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPEIDIILSEVDLPM 89
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G K+L++I + +L PVIMMS V V++ +R GA DYL+KP+R EL N+W H
Sbjct: 90 AKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTH 149
Query: 149 VVRKR 153
+ R+R
Sbjct: 150 MWRRR 154
>gi|15238416|ref|NP_196128.1| myb family transcription factor [Arabidopsis thaliana]
gi|10178048|dbj|BAB11531.1| unnamed protein product [Arabidopsis thaliana]
gi|20260578|gb|AAM13187.1| unknown protein [Arabidopsis thaliana]
gi|30023728|gb|AAP13397.1| At5g05090 [Arabidopsis thaliana]
gi|332003444|gb|AED90827.1| myb family transcription factor [Arabidopsis thaliana]
Length = 266
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 60/80 (75%), Gaps = 6/80 (7%)
Query: 205 EDDGELESDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 263
E G+ D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTREN
Sbjct: 65 EIAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTREN 124
Query: 264 VASHLQEINLQKFRLYLKRL 283
VASH LQK+RLYLKR+
Sbjct: 125 VASH-----LQKYRLYLKRM 139
>gi|21537017|gb|AAM61358.1| unknown [Arabidopsis thaliana]
Length = 266
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 60/80 (75%), Gaps = 6/80 (7%)
Query: 205 EDDGELESDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 263
E G+ D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTREN
Sbjct: 65 EIAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTREN 124
Query: 264 VASHLQEINLQKFRLYLKRL 283
VASH LQK+RLYLKR+
Sbjct: 125 VASH-----LQKYRLYLKRM 139
>gi|449453151|ref|XP_004144322.1| PREDICTED: uncharacterized protein LOC101216969 [Cucumis sativus]
Length = 301
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 6/73 (8%)
Query: 212 SDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 270
SD+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 88 SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH--- 144
Query: 271 INLQKFRLYLKRL 283
LQK+RLYLKR+
Sbjct: 145 --LQKYRLYLKRM 155
>gi|15228370|ref|NP_187687.1| myb family transcription factor [Arabidopsis thaliana]
gi|6630554|gb|AAF19573.1|AC011708_16 unknown protein [Arabidopsis thaliana]
gi|332641430|gb|AEE74951.1| myb family transcription factor [Arabidopsis thaliana]
Length = 335
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 6/77 (7%)
Query: 208 GELESDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 266
G D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVAS
Sbjct: 92 GGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVAS 151
Query: 267 HLQEINLQKFRLYLKRL 283
H LQK+RLYLKR+
Sbjct: 152 H-----LQKYRLYLKRM 163
>gi|297733942|emb|CBI15189.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + +L C Y VT+ A +D L D++L++V +P
Sbjct: 23 SNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEVDLPM 82
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G K+L++I + +L P+IMMSA VS V++ +R GA DYL+KP+R EL N+W H
Sbjct: 83 TKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 142
Query: 149 VVRKR 153
+ R+R
Sbjct: 143 MWRRR 147
>gi|218192572|gb|EEC74999.1| hypothetical protein OsI_11061 [Oryza sativa Indica Group]
Length = 780
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 16/135 (11%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYN-------------VTTCSQAAVALDILRERKGCF 80
LRVL+V++D + +++ +LR+C Y V A L + +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEDSRGFCASRFPSAVIPAENGLHAWQCLEDLQNHI 140
Query: 81 DVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
D+VL++V MP + G LL I + D+PVIMMS++ + V + + GA D+L+KPI
Sbjct: 141 DLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPI 200
Query: 138 REEELKNIWQHVVRK 152
R+ ELKN+WQHV R+
Sbjct: 201 RKNELKNLWQHVWRR 215
>gi|297829626|ref|XP_002882695.1| hypothetical protein ARALYDRAFT_897268 [Arabidopsis lyrata subsp.
lyrata]
gi|297328535|gb|EFH58954.1| hypothetical protein ARALYDRAFT_897268 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%), Gaps = 6/72 (8%)
Query: 213 DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 271
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 93 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 148
Query: 272 NLQKFRLYLKRL 283
LQK+RLYLKR+
Sbjct: 149 -LQKYRLYLKRM 159
>gi|312282317|dbj|BAJ34024.1| unnamed protein product [Thellungiella halophila]
Length = 325
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%), Gaps = 6/72 (8%)
Query: 213 DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 271
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 94 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 149
Query: 272 NLQKFRLYLKRL 283
LQK+RLYLKR+
Sbjct: 150 -LQKYRLYLKRM 160
>gi|356565113|ref|XP_003550789.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 565
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D + +L C Y V + A +D L D++L++V +P
Sbjct: 37 VRILLCDNDSKSSEEVFTLLLGCSYQVISVRSARQVIDALNAEGQYIDMILAEVDLPIKK 96
Query: 94 GFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G KLL++I + +L PVIMMSA VS V++ +R GA DYL+KP+R EL N+W H+
Sbjct: 97 GMKLLKYIARDKELCRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 156
Query: 151 RKR 153
R+R
Sbjct: 157 RRR 159
>gi|225439773|ref|XP_002275837.1| PREDICTED: two-component response regulator-like APRR7 [Vitis
vinifera]
gi|297741496|emb|CBI32628.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
RVL+V++D + ++ +LR C Y VT S A IL++ D+VL++V++P + G
Sbjct: 59 RVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDTSNHIDLVLTEVNLPRLSG 118
Query: 95 FKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 151
LL I ++PVIMMS + V++ + GA D+L+KP+R+ ELK +WQH+ R
Sbjct: 119 IALLCKIMNHKTRKNIPVIMMSTHDSGALVLKCLSKGATDFLVKPVRKNELKFLWQHIWR 178
Query: 152 KRWN 155
+R N
Sbjct: 179 RRQN 182
>gi|312283289|dbj|BAJ34510.1| unnamed protein product [Thellungiella halophila]
Length = 270
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%), Gaps = 6/72 (8%)
Query: 213 DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 271
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 76 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 131
Query: 272 NLQKFRLYLKRL 283
LQK+RLYLKR+
Sbjct: 132 -LQKYRLYLKRM 142
>gi|307111029|gb|EFN59264.1| hypothetical protein CHLNCDRAFT_137569, partial [Chlorella
variabilis]
Length = 188
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCL-YNVTTCSQAAVALDILRERKGCFDVVLSDV 87
QFP GLRVL+VDD +C I Q+ L Y VT+ S A AL LR FDVVL++
Sbjct: 6 QFPKGLRVLLVDDMHSCSSIRTQLESPSLQYTVTSVSSATEALGYLRTGVAAFDVVLAES 65
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+ D + + PV++MSA G VMR ++ GA D+L KP+ +LKNIWQ
Sbjct: 66 RIVAADESVGRCFVDAFEETPVVLMSACGTPDDVMRAVKLGAVDFLDKPLSHLKLKNIWQ 125
Query: 148 HVVRK 152
H VRK
Sbjct: 126 HSVRK 130
>gi|312283377|dbj|BAJ34554.1| unnamed protein product [Thellungiella halophila]
Length = 728
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V++D I+ +LR C Y V + A +L + D+VL++V MP +
Sbjct: 84 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 143
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I ++PVIMMS+ + V + + GA D+L+KPIR+ ELK +WQHV
Sbjct: 144 GISLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 203
Query: 151 RK 152
R+
Sbjct: 204 RR 205
>gi|125529286|gb|EAY77400.1| hypothetical protein OsI_05389 [Oryza sativa Indica Group]
Length = 238
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 57/74 (77%), Gaps = 5/74 (6%)
Query: 217 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 276
++K+ R+VW+ +LH++FV V LG+ AVPK I++LMNV GLTRENVASH LQK+
Sbjct: 115 SSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASH-----LQKY 169
Query: 277 RLYLKRLNGVSQQG 290
RLY+KR+ G+S +G
Sbjct: 170 RLYVKRMQGLSNEG 183
>gi|46371870|gb|AAS90600.1| induced protein MgI1 [Oryza sativa Japonica Group]
Length = 238
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 57/74 (77%), Gaps = 5/74 (6%)
Query: 217 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 276
++K+ R+VW+ +LH++FV V LG+ AVPK I++LMNV GLTRENVASH LQK+
Sbjct: 115 SSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASH-----LQKY 169
Query: 277 RLYLKRLNGVSQQG 290
RLY+KR+ G+S +G
Sbjct: 170 RLYVKRMQGLSNEG 183
>gi|18414032|ref|NP_568107.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName:
Full=Pseudo-response regulator 7
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thaliana]
gi|14532638|gb|AAK64047.1| unknown protein [Arabidopsis thaliana]
gi|23296600|gb|AAN13129.1| unknown protein [Arabidopsis thaliana]
gi|332003137|gb|AED90520.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
Length = 727
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V++D I+ +LR C Y V S A +L + D+VL++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K+L H ++PVIMMS+ + V + + GA D+L+KPIR+ ELK +WQHV
Sbjct: 138 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHV 196
Query: 150 VRK 152
R+
Sbjct: 197 WRR 199
>gi|357133685|ref|XP_003568454.1| PREDICTED: uncharacterized protein LOC100835635 [Brachypodium
distachyon]
Length = 326
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 6/73 (8%)
Query: 213 DDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 271
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 89 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 144
Query: 272 NLQKFRLYLKRLN 284
LQK+RLYLKR+
Sbjct: 145 -LQKYRLYLKRMQ 156
>gi|242093588|ref|XP_002437284.1| hypothetical protein SORBIDRAFT_10g024183 [Sorghum bicolor]
gi|241915507|gb|EER88651.1| hypothetical protein SORBIDRAFT_10g024183 [Sorghum bicolor]
Length = 92
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK--GCFDVVLS 85
D FP GL VL V+DD C ++LE+ L+ YN A + LD+LRERK FD+V+S
Sbjct: 4 DTFPIGLSVLAVEDDCVCCKVLERKLKYYNYNAIMVMNAQMVLDMLRERKDGNWFDLVIS 63
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPV 109
+V +P+MDGF LL+ IGLEMDLPV
Sbjct: 64 NVIIPNMDGFNLLKLIGLEMDLPV 87
>gi|357150179|ref|XP_003575369.1| PREDICTED: two-component response regulator-like PRR1-like
[Brachypodium distachyon]
Length = 521
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D R + ++LR C Y VT +++L D++L++V +P
Sbjct: 31 SKVRILLCDSDPDSSRDVLRLLRNCSYQVTCAKSPRQVINVLNCEGAEMDIILAEVDLPV 90
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
FK+L++I +L P+IMMS VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 91 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 150
Query: 149 VVRKR 153
V R+R
Sbjct: 151 VWRRR 155
>gi|238011812|gb|ACR36941.1| unknown [Zea mays]
gi|408690380|gb|AFU81650.1| G2-like transcription factor, partial [Zea mays subsp. mays]
gi|413945355|gb|AFW78004.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%), Gaps = 6/72 (8%)
Query: 213 DDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 271
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 88 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 143
Query: 272 NLQKFRLYLKRL 283
LQK+RLYLKR+
Sbjct: 144 -LQKYRLYLKRM 154
>gi|6996313|emb|CAB75508.1| ABI3-interacting protein, AIP1 [Arabidopsis thaliana]
Length = 618
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D T L + +L C Y VT A +D L D++L+++ +P
Sbjct: 19 VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 94 GFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G K+L +I + DL PVIMMS V V++ ++ GA DYL+KP+ EL N+W H+
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLLTNELLNLWTHMW 138
Query: 151 RKR 153
R+R
Sbjct: 139 RRR 141
>gi|115463879|ref|NP_001055539.1| Os05g0412000 [Oryza sativa Japonica Group]
gi|50878489|gb|AAT85262.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038221|gb|AAT94024.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113579090|dbj|BAF17453.1| Os05g0412000 [Oryza sativa Japonica Group]
gi|125552332|gb|EAY98041.1| hypothetical protein OsI_19956 [Oryza sativa Indica Group]
gi|222631588|gb|EEE63720.1| hypothetical protein OsJ_18538 [Oryza sativa Japonica Group]
Length = 331
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%), Gaps = 6/72 (8%)
Query: 213 DDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 271
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 102 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 157
Query: 272 NLQKFRLYLKRL 283
LQK+RLYLKR+
Sbjct: 158 -LQKYRLYLKRM 168
>gi|281308388|gb|ADA58342.1| pseudo-response regulator 7a [Brassica rapa]
Length = 725
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 16/157 (10%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAG-----------LRVLVVDDDITCLRILEQMLRRCLYN 59
+G +G GSS V + Q A +RVL+V++D I+ +LR C Y
Sbjct: 61 NGAAGQGSSPGLQVPLSQQTQATVCWERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYE 120
Query: 60 VTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF----KLLEHIGLEMDLPVIMMSAD 115
V + A +L + D+VL++V MP + G K+L H ++PVIMMS+
Sbjct: 121 VVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLSGVGLLCKILNHKS-RRNIPVIMMSSH 179
Query: 116 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + GA D+L+KPIR+ ELK +WQHV R+
Sbjct: 180 DSMGLIFKCLSKGAVDFLVKPIRKNELKILWQHVWRR 216
>gi|242036083|ref|XP_002465436.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
gi|241919290|gb|EER92434.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
Length = 765
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRV++V++D + +++ +LR+C Y V + A L + + D+VL++V MP +
Sbjct: 80 LRVMLVENDDSTRQVVSALLRKCCYEVIPAENGSHAWRYLEDLQNNIDLVLTEVFMPCLS 139
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I + D+PVIMMS++ +S V + + GA D+L+KP+R+ ELKN+WQHV
Sbjct: 140 GIGLLSKITSHKICKDIPVIMMSSNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 199
Query: 151 RK 152
R+
Sbjct: 200 RR 201
>gi|384246908|gb|EIE20396.1| hypothetical protein COCSUDRAFT_9894, partial [Coccomyxa
subellipsoidea C-169]
Length = 59
Score = 90.9 bits (224), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 51/64 (79%), Gaps = 5/64 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KKPR+VW+ ELH +F++AV LG+ AVPK IL+LMNV G+TRENVASH LQK+RL
Sbjct: 1 KKPRLVWTAELHARFMNAVTHLGVKHAVPKTILQLMNVEGMTRENVASH-----LQKYRL 55
Query: 279 YLKR 282
YLKR
Sbjct: 56 YLKR 59
>gi|326512880|dbj|BAK03347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 53/68 (77%), Gaps = 5/68 (7%)
Query: 217 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 276
T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH LQK+
Sbjct: 87 TLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH-----LQKY 141
Query: 277 RLYLKRLN 284
RLYLKR+
Sbjct: 142 RLYLKRMQ 149
>gi|297812633|ref|XP_002874200.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
gi|297320037|gb|EFH50459.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
Length = 556
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 8/124 (6%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LRVL+V+ D + +I+ +LR+C Y V A ++L+ + D++L++V +P +
Sbjct: 51 ALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 110
Query: 93 DGFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G+ LL I +E D +PVI S D V+ V + + GA DYL+KP+R EL+N+WQH
Sbjct: 111 SGYALLTLI-MEHDICKNIPVI--STDS-VNTVYKCMLKGAADYLVKPLRRNELRNLWQH 166
Query: 149 VVRK 152
V R+
Sbjct: 167 VWRR 170
>gi|115442515|ref|NP_001045537.1| Os01g0971800 [Oryza sativa Japonica Group]
gi|15289981|dbj|BAB63676.1| induced protein MgI1 [Oryza sativa Japonica Group]
gi|71067054|dbj|BAE16279.1| putative transcription factor [Oryza sativa Japonica Group]
gi|113535068|dbj|BAF07451.1| Os01g0971800 [Oryza sativa Japonica Group]
gi|125573476|gb|EAZ14991.1| hypothetical protein OsJ_04927 [Oryza sativa Japonica Group]
Length = 238
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%), Gaps = 5/72 (6%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
K+ R+VW+ +LH++FV V LG+ AVPK I++LMNV GLTRENVASH LQK+RL
Sbjct: 117 KRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASH-----LQKYRL 171
Query: 279 YLKRLNGVSQQG 290
Y+KR+ G+S +G
Sbjct: 172 YVKRMQGLSNEG 183
>gi|413951204|gb|AFW83853.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 219
Score = 89.7 bits (221), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 5/70 (7%)
Query: 216 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 275
++ ++PR+VW+ +LH++FV V LGI KAVPK I+ELMNV GLTRENVASH LQK
Sbjct: 112 NSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENVASH-----LQK 166
Query: 276 FRLYLKRLNG 285
+RLY+KR+ G
Sbjct: 167 YRLYVKRMRG 176
>gi|443302655|gb|AGC82269.1| cAMP phosphodiesterase [Acanthamoeba castellanii]
Length = 621
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 87/152 (57%), Gaps = 10/152 (6%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYN-VTTCSQAAVALDILRERKGCFDVVLSDVHM 89
P +++LVVDD+ T ++ ++L + Y V A++++ R F++VL D+HM
Sbjct: 9 PKEIKILVVDDEPTARIVVRKLLEKTGYTEVEVVESGRKAIELIENR--SFNLVLCDLHM 66
Query: 90 PDMDGFKLLEHIGLEM---DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
PD+DG +++ + + D P++MMSA ++ V + + GA DYL+KPI+ +KN+W
Sbjct: 67 PDIDGIGVVKAVRKKAHMDDSPIVMMSATEDLNIVYKCLSEGADDYLLKPIQANAVKNLW 126
Query: 147 QHVVRKRWNENKEHENSGSLEETDHHKRGSDE 178
Q+V RKR KE E + L + + DE
Sbjct: 127 QNVWRKR----KEKETANMLSHERNKSKAMDE 154
>gi|281308396|gb|ADA58346.1| pseudo-response regulator 7b [Brassica rapa]
Length = 704
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V++D I+ +LR C Y V + A +L + D+VL++V MP +
Sbjct: 74 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 133
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G K+L H ++PVIMMS+ + V + + GA D+L+KPIR+ ELK +WQHV
Sbjct: 134 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHV 192
Query: 150 VRK 152
R+
Sbjct: 193 WRR 195
>gi|15226794|ref|NP_181630.1| myb family transcription factor [Arabidopsis thaliana]
gi|2623311|gb|AAB86457.1| unknown protein [Arabidopsis thaliana]
gi|18252893|gb|AAL62373.1| unknown protein [Arabidopsis thaliana]
gi|20197124|gb|AAM14927.1| unknown protein [Arabidopsis thaliana]
gi|23197780|gb|AAN15417.1| unknown protein [Arabidopsis thaliana]
gi|330254814|gb|AEC09908.1| myb family transcription factor [Arabidopsis thaliana]
Length = 248
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 5/76 (6%)
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
G + + T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 93 GSIGGEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASH 152
Query: 268 LQEINLQKFRLYLKRL 283
LQK+RLYL+R+
Sbjct: 153 -----LQKYRLYLRRM 163
>gi|226531730|ref|NP_001147359.1| ARR1 protein-like [Zea mays]
gi|195610500|gb|ACG27080.1| ARR1 protein-like [Zea mays]
Length = 219
Score = 89.4 bits (220), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 5/70 (7%)
Query: 216 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 275
++ ++PR+VW+ +LH++FV V LGI KAVPK I+ELMNV GLTRENVASH LQK
Sbjct: 112 NSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIIELMNVEGLTRENVASH-----LQK 166
Query: 276 FRLYLKRLNG 285
+RLY+KR+ G
Sbjct: 167 YRLYVKRMRG 176
>gi|281308392|gb|ADA58344.1| pseudo-response regulator 1b [Brassica rapa]
Length = 509
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D L + +L +C Y VT+ A +D L D++L+++ +P
Sbjct: 19 VRILLCDNDSKSLGDVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 94 GFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G K+L +I + DL PVIMMS V V++ ++ GA DYL+KP+R EL N+W ++
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTYMW 138
Query: 151 RKR 153
R+R
Sbjct: 139 RRR 141
>gi|219887519|gb|ACL54134.1| unknown [Zea mays]
gi|413951205|gb|AFW83854.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 195
Score = 89.4 bits (220), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 5/70 (7%)
Query: 216 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 275
++ ++PR+VW+ +LH++FV V LGI KAVPK I+ELMNV GLTRENVASH LQK
Sbjct: 88 NSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENVASH-----LQK 142
Query: 276 FRLYLKRLNG 285
+RLY+KR+ G
Sbjct: 143 YRLYVKRMRG 152
>gi|307109409|gb|EFN57647.1| hypothetical protein CHLNCDRAFT_142770 [Chlorella variabilis]
Length = 524
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 54/69 (78%), Gaps = 5/69 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
+K R+VW+ ELH +F++A++ LG+ AVPK IL +MNV G+TRENVASH LQK+RL
Sbjct: 203 RKARLVWTQELHNRFINALSHLGLKNAVPKSILAMMNVDGMTRENVASH-----LQKYRL 257
Query: 279 YLKRLNGVS 287
YL+RL G+S
Sbjct: 258 YLRRLGGLS 266
>gi|449448936|ref|XP_004142221.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 797
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +L C Y V + A +L + D+VL++V MP +
Sbjct: 89 LKVLLVENDDSTRHLVTALLCNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLS 148
Query: 94 GFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G LL I ++PVIMMS+ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 149 GIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 208
Query: 151 RK 152
R+
Sbjct: 209 RR 210
>gi|345303921|ref|YP_004825823.1| two component, sigma54 specific, Fis family transcriptional
regulator [Rhodothermus marinus SG0.5JP17-172]
gi|345113154|gb|AEN73986.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodothermus marinus SG0.5JP17-172]
Length = 476
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 5/168 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L+VDD+ + E++ R +T+C A AL++L++ FD+V++D MPDMDG
Sbjct: 14 ILLVDDEHLLHTLFERLFTRHGMRLTSCYNALQALEVLKKEADAFDLVITDFKMPDMDGL 73
Query: 96 KLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 154
+LL +I E DL VIM++A V +R +++GA DY+ KP EEL Q + +R
Sbjct: 74 ELLAYIRQEHPDLQVIMITAHANVQHAVRAMQNGAIDYIPKPFSTEELVERVQAALARRR 133
Query: 155 NENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 202
+ +E N +R IEY T KA R++A
Sbjct: 134 KQQEEVNNRTPARLAK--RRRKPTIEYVGE--HPTIQRLKAMLPRVAA 177
>gi|297827739|ref|XP_002881752.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297327591|gb|EFH58011.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 5/76 (6%)
Query: 208 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 267
G + + T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 92 GSIGGEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASH 151
Query: 268 LQEINLQKFRLYLKRL 283
LQK+RLYL+R+
Sbjct: 152 -----LQKYRLYLRRM 162
>gi|71067060|dbj|BAE16282.1| StPCL1 [Solanum tuberosum]
Length = 314
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 12/105 (11%)
Query: 185 VNEGTEGTFKAQRKRISAKEEDDGEL----ESDDPS--TTKKPRVVWSVELHQQFVSAVN 238
+ EG++ K +R EE D L +DD S T K+PR+VW+ +LH++F+ V
Sbjct: 110 IREGSDPR-KLRRVESGGTEEADSSLCNENFADDSSAKTPKRPRLVWTPQLHKRFIEVVA 168
Query: 239 QLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 283
LGI AVPK I++LMNV GLTRENVASH LQK+RLY KR+
Sbjct: 169 HLGIKGAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYTKRM 208
>gi|302834688|ref|XP_002948906.1| Myb-related transcription factor [Volvox carteri f. nagariensis]
gi|300265651|gb|EFJ49841.1| Myb-related transcription factor [Volvox carteri f. nagariensis]
Length = 2120
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 54/68 (79%), Gaps = 5/68 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
++PR++W+ ELH +F++ V QLG++ AVPK IL+LM V G+TRENVASH LQK+RL
Sbjct: 1438 RRPRMLWTHELHCRFMAVVAQLGVETAVPKNILQLMAVDGMTRENVASH-----LQKYRL 1492
Query: 279 YLKRLNGV 286
YL+RL GV
Sbjct: 1493 YLRRLAGV 1500
>gi|326522234|dbj|BAK07579.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + + ++L C Y VT +++L D++L++V +P
Sbjct: 29 SKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPV 88
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
FK+L++IG +L P+IMMS VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 89 SKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 148
Query: 149 VVRKR 153
V R+R
Sbjct: 149 VWRRR 153
>gi|364285649|gb|AEW48242.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + + ++L C Y VT +++L D++L++V +P
Sbjct: 29 SKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPV 88
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
FK+L++IG +L P+IMMS VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 89 SKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 148
Query: 149 VVRKR 153
V R+R
Sbjct: 149 VWRRR 153
>gi|326531994|dbj|BAK01373.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|364285651|gb|AEW48243.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + + ++L C Y VT +++L D++L++V +P
Sbjct: 29 SKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPV 88
Query: 92 MDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
FK+L++IG +L P+IMMS VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 89 SKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 148
Query: 149 VVRKR 153
V R+R
Sbjct: 149 VWRRR 153
>gi|242087939|ref|XP_002439802.1| hypothetical protein SORBIDRAFT_09g020340 [Sorghum bicolor]
gi|241945087|gb|EES18232.1| hypothetical protein SORBIDRAFT_09g020340 [Sorghum bicolor]
Length = 332
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 56/72 (77%), Gaps = 6/72 (8%)
Query: 213 DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 271
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVAS
Sbjct: 93 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVAS----- 147
Query: 272 NLQKFRLYLKRL 283
LQK+RLYLKR+
Sbjct: 148 QLQKYRLYLKRM 159
>gi|397911978|gb|AFO69282.1| pseudo-response regulator 1, partial [Hordeum vulgare]
Length = 491
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+ D D + + ++L C Y VT +++L D++L++V +P
Sbjct: 1 RILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSKC 60
Query: 95 FKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 151
FK+L++IG +L P+IMMS VS V++ +R GA +YL+KP+R EL N+W HV R
Sbjct: 61 FKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWR 120
Query: 152 KR 153
+R
Sbjct: 121 RR 122
>gi|225427316|ref|XP_002279150.1| PREDICTED: two-component response regulator-like APRR2 [Vitis
vinifera]
gi|297742160|emb|CBI33947.3| unnamed protein product [Vitis vinifera]
Length = 557
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A D+ FP GLRVL++DDD T + L Y V+T AL + + F
Sbjct: 5 ANDLQEWKDFPKGLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPESF 64
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREE 140
V + +V + FK LE DLP IM+S+ +S +M+ I GA ++L KP+ E+
Sbjct: 65 HVAIVEVSTGNNGSFKFLE---TAKDLPTIMISSIHCLSTMMKCIALGAVEFLRKPLSED 121
Query: 141 ELKNIWQHVVRKRWN 155
+L+NIWQHVV K +N
Sbjct: 122 KLRNIWQHVVHKAFN 136
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%), Gaps = 5/65 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK +V W+ ELH++FV AV QLG+D+A+P RILELM V GLTR NVASH LQK+R+
Sbjct: 315 KKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASH-----LQKYRM 369
Query: 279 YLKRL 283
+ + +
Sbjct: 370 HRRHI 374
>gi|170172424|dbj|BAG12980.1| RHYTHM OF CHLOROPLAST 75 [Chlamydomonas reinhardtii]
gi|170172426|dbj|BAG12981.1| RHYTHM OF CHLOROPLAST 75 [Chlamydomonas reinhardtii]
Length = 1705
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 5/64 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KKPR+ WS ELH +F++A+ QLGI AVPK IL+LMNV GLTRENVASH LQK+R+
Sbjct: 1271 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASH-----LQKYRI 1325
Query: 279 YLKR 282
LKR
Sbjct: 1326 LLKR 1329
>gi|28948379|pdb|1IRZ|A Chain A, Solution Structure Of Arr10-B Belonging To The Garp Family
Of Plant Myb-Related Dna Binding Motifs Of The
Arabidopsis Response Regulators
Length = 64
Score = 87.8 bits (216), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 56/69 (81%), Gaps = 5/69 (7%)
Query: 216 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 275
+ KKPRV+W+ ELH +F++AV+ LG+++AVPK+IL+LMNV LTRENVASH LQK
Sbjct: 1 TAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASH-----LQK 55
Query: 276 FRLYLKRLN 284
FR+ LK+++
Sbjct: 56 FRVALKKVS 64
>gi|302844239|ref|XP_002953660.1| myb-related transcription factor [Volvox carteri f. nagariensis]
gi|300261069|gb|EFJ45284.1| myb-related transcription factor [Volvox carteri f. nagariensis]
Length = 1004
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 5/64 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KKPR+ WS ELH +F++A+ QLGI AVPK IL+LMNV GLTRENVASH LQK+R+
Sbjct: 855 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASH-----LQKYRI 909
Query: 279 YLKR 282
LKR
Sbjct: 910 LLKR 913
>gi|108864017|gb|ABG22374.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 620
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 69 ALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGI 125
A ++RER FD+VL++V MP + G +LL I ++PVIMMS+ + V+R +
Sbjct: 3 AWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCM 62
Query: 126 RHGACDYLIKPIREEELKNIWQHVVRK 152
+ GA D+L+KP+R+ EL+N+WQHV R+
Sbjct: 63 QKGAVDFLVKPVRKNELRNLWQHVWRR 89
>gi|115484281|ref|NP_001065802.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|108864015|gb|ABG22372.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|108864016|gb|ABG22373.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|113644506|dbj|BAF27647.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|125576282|gb|EAZ17504.1| hypothetical protein OsJ_33036 [Oryza sativa Japonica Group]
gi|213959178|gb|ACJ54923.1| CCT motif family protein [Oryza sativa Japonica Group]
gi|218185285|gb|EEC67712.1| hypothetical protein OsI_35190 [Oryza sativa Indica Group]
Length = 623
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 69 ALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGI 125
A ++RER FD+VL++V MP + G +LL I ++PVIMMS+ + V+R +
Sbjct: 3 AWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCM 62
Query: 126 RHGACDYLIKPIREEELKNIWQHVVRK 152
+ GA D+L+KP+R+ EL+N+WQHV R+
Sbjct: 63 QKGAVDFLVKPVRKNELRNLWQHVWRR 89
>gi|319657093|gb|ADV58925.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657097|gb|ADV58927.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657101|gb|ADV58929.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 30 FPAGL-RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
P G +VL+V+ D + I+ +LR+C Y V A IL + D+VL++V
Sbjct: 91 LPVGSPKVLLVESDDSTRHIVSALLRKCSYEVVGVPNGIEAWKILEDLSNQIDLVLTEVV 150
Query: 89 MPDMDGFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
+ G LL I + PVIMMS+ + V++ + GA D+L+KPIR+ ELKN+
Sbjct: 151 TSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELKNL 210
Query: 146 WQHVVRK 152
WQHV R+
Sbjct: 211 WQHVWRR 217
>gi|170172416|dbj|BAG12976.1| RHYTHM OF CHLOROPLAST 15 [Chlamydomonas reinhardtii]
Length = 631
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 11/87 (12%)
Query: 206 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
DDG + K+PR+VW+ +LH++F SAV +LG DKAVPK I++ MN+ GLTRENVA
Sbjct: 383 DDGTTRA-----VKRPRLVWTPQLHRKFESAVIKLGEDKAVPKTIMQEMNIDGLTRENVA 437
Query: 266 SHLQEINLQKFRLYLKR-LNGVSQQGG 291
SH LQK+R+ +R + G S GG
Sbjct: 438 SH-----LQKYRMIKRRDVTGTSSDGG 459
>gi|7413556|emb|CAB86035.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V++D I+ +LR C Y V S A +L + D+VL++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 94 GF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
G K+L H ++PVIMMS+ + V + + GA D+L+KPIR+ ELK +WQH
Sbjct: 138 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQH 195
>gi|357482307|ref|XP_003611439.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512774|gb|AES94397.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 543
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 6/128 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVL+++ D + L YNV+T AL + CF V + +V +
Sbjct: 14 FPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSI 73
Query: 90 --PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
PD GFK LE+ DLP IM S ++ +M+ I GA ++L KP+ E++LKNIWQ
Sbjct: 74 SCPD-GGFKFLENAK---DLPTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQ 129
Query: 148 HVVRKRWN 155
HVV K +N
Sbjct: 130 HVVHKAFN 137
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 47/60 (78%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK +V W+ ELH++FV AV QLGID+A+P RILELM V GLTR NVASHLQ+ + K ++
Sbjct: 310 KKMKVDWTAELHKKFVKAVEQLGIDQAIPSRILELMKVDGLTRHNVASHLQKYRMHKRQI 369
>gi|357482309|ref|XP_003611440.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512775|gb|AES94398.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 548
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 6/128 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVL+++ D + L YNV+T AL + CF V + +V +
Sbjct: 14 FPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSI 73
Query: 90 --PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
PD GFK LE+ DLP IM S ++ +M+ I GA ++L KP+ E++LKNIWQ
Sbjct: 74 SCPD-GGFKFLENAK---DLPTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQ 129
Query: 148 HVVRKRWN 155
HVV K +N
Sbjct: 130 HVVHKAFN 137
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK +V W+ ELH++FV AV QLGID+A+P RILELM V GLTR NVASHLQ QK+R+
Sbjct: 310 KKMKVDWTAELHKKFVKAVEQLGIDQAIPSRILELMKVDGLTRHNVASHLQIFVEQKYRM 369
Query: 279 YLKRL 283
+ +++
Sbjct: 370 HKRQI 374
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLSRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|384252672|gb|EIE26148.1| hypothetical protein COCSUDRAFT_61138 [Coccomyxa subellipsoidea
C-169]
Length = 444
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 80/162 (49%), Gaps = 21/162 (12%)
Query: 2 AALQRIVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVT 61
A L+RI SG G FP GL+VLVVD D + + L Q L Y V+
Sbjct: 3 AGLKRIPSFSGRPG--------------FPNGLQVLVVDGDTSSSQCLRQKLEELAYEVS 48
Query: 62 TCSQAAVALDILRERKGCFDVVLSDVHM---PDMDGFKLLEHIGLEMDLPVIMMS-ADGR 117
CS + A +LR+ +D++L + DG L + LP+++MS
Sbjct: 49 CCSSGSDASALLRKEDSSYDILLVEAKALAKDATDGGSLRDSAA---HLPLVLMSEKSSS 105
Query: 118 VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKE 159
AV RGI GA D L KP+ +L+NIWQHVVRK + +++
Sbjct: 106 TDAVWRGIELGAADVLEKPLSSLKLRNIWQHVVRKMMSSSQD 147
>gi|15241429|ref|NP_199232.1| protein GOLDEN2-like 2 [Arabidopsis thaliana]
gi|75333752|sp|Q9FFH0.1|GLK2_ARATH RecName: Full=Transcription activator GLK2; AltName: Full=GBF'S
PRO-RICH REGION-INTERACTING factor 2; AltName:
Full=Golden2-like protein 2; Short=AtGLK2
gi|9759520|dbj|BAB10986.1| unnamed protein product [Arabidopsis thaliana]
gi|13311005|gb|AAK16744.1| golden2-like transcription factor [Arabidopsis thaliana]
gi|13432090|gb|AAK20121.1| golden2-like protein 2 [Arabidopsis thaliana]
gi|17221601|dbj|BAB78467.1| GPRI2 [Arabidopsis thaliana]
gi|332007689|gb|AED95072.1| protein GOLDEN2-like 2 [Arabidopsis thaliana]
Length = 386
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
Query: 212 SDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 271
SD+ KKP+V W+ ELH++FV AV QLG+DKAVP RILE+MNV LTR NVASH
Sbjct: 139 SDENDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASH---- 194
Query: 272 NLQKFRLYLKRL 283
LQK+R + K L
Sbjct: 195 -LQKYRSHRKHL 205
>gi|268316364|ref|YP_003290083.1| Fis family two component sigma-54 specific transcriptional
regulator [Rhodothermus marinus DSM 4252]
gi|262333898|gb|ACY47695.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodothermus marinus DSM 4252]
Length = 472
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L+VDD+ + E++ R +T+C A A+++L++ FD+V++D MPDMDG
Sbjct: 11 ILLVDDEHLLHTLFERLFTRHGLRLTSCYNALQAMEVLKKEADAFDLVITDFKMPDMDGL 70
Query: 96 KLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 154
+LL +I E DL VIM++A V +R +++GA DY+ KP EEL Q + +R
Sbjct: 71 ELLAYIRQEHPDLQVIMITAHANVQHAVRAMQNGAIDYIPKPFSTEELVERVQAALARR- 129
Query: 155 NENKEHENSGSLEETDHHKRGSDEIEY 181
++ E +R IEY
Sbjct: 130 --REQQEARAKQPARTSQRRARPTIEY 154
>gi|456359240|dbj|BAM93449.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359248|dbj|BAM93453.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 150 VRK 152
R+
Sbjct: 156 WRR 158
>gi|15215715|gb|AAK91403.1| AT5g44190/MLN1_11 [Arabidopsis thaliana]
gi|21700809|gb|AAM70528.1| AT5g44190/MLN1_11 [Arabidopsis thaliana]
Length = 314
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
Query: 212 SDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 271
SD+ KKP+V W+ ELH++FV AV QLG+DKAVP RILE+MNV LTR NVASH
Sbjct: 139 SDENDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASH---- 194
Query: 272 NLQKFRLYLKRL 283
LQK+R + K L
Sbjct: 195 -LQKYRSHRKHL 205
>gi|456359228|dbj|BAM93443.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359236|dbj|BAM93447.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359238|dbj|BAM93448.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359242|dbj|BAM93450.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359260|dbj|BAM93459.1| pseudo-response regulator [Triticum dicoccoides]
Length = 662
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 150 VRK 152
R+
Sbjct: 156 WRR 158
>gi|456359230|dbj|BAM93444.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359232|dbj|BAM93445.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359234|dbj|BAM93446.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 150 VRK 152
R+
Sbjct: 156 WRR 158
>gi|118638651|gb|ABL09481.1| pseudo-response regulator [Aegilops tauschii]
Length = 661
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 150 VRK 152
R+
Sbjct: 152 WRR 154
>gi|297794987|ref|XP_002865378.1| hypothetical protein ARALYDRAFT_494575 [Arabidopsis lyrata subsp.
lyrata]
gi|297311213|gb|EFH41637.1| hypothetical protein ARALYDRAFT_494575 [Arabidopsis lyrata subsp.
lyrata]
Length = 368
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
Query: 212 SDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 271
S+D KKP+V W+ ELH++FV AV QLG+DKAVP RILE+MNV LTR NVASH
Sbjct: 121 SNDNDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASH---- 176
Query: 272 NLQKFRLYLKRL 283
LQK+R + K L
Sbjct: 177 -LQKYRSHRKHL 187
>gi|118638644|gb|ABL09478.1| pseudo-response regulator [Triticum aestivum]
gi|118638646|gb|ABL09479.1| pseudo-response regulator [Triticum aestivum]
gi|118638648|gb|ABL09480.1| pseudo-response regulator [Triticum aestivum]
gi|395759125|dbj|BAM31259.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 150 VRK 152
R+
Sbjct: 152 WRR 154
>gi|118638642|gb|ABL09477.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 150 VRK 152
R+
Sbjct: 152 WRR 154
>gi|379025526|dbj|BAL63540.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|379025506|dbj|BAL63530.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025508|dbj|BAL63531.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025510|dbj|BAL63532.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|456359114|dbj|BAM93386.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 150 VRK 152
R+
Sbjct: 151 WRR 153
>gi|118638624|gb|ABL09468.1| pseudo-response regulator [Triticum aestivum]
gi|383215296|gb|AFG73161.1| pseudo-response regulator [Triticum aestivum]
gi|383215297|gb|AFG73162.1| pseudo-response regulator [Triticum aestivum]
gi|383215298|gb|AFG73163.1| pseudo-response regulator [Triticum aestivum]
Length = 664
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|319657095|gb|ADV58926.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657099|gb|ADV58928.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657103|gb|ADV58930.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 30 FPAGL-RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
P G +VL+V+ D + I+ +LR C Y V A IL + D+VL++V
Sbjct: 91 LPVGSPKVLLVESDDSTRHIVSALLRNCSYEVVGVPNGIEAWKILEDLSNQIDLVLTEVV 150
Query: 89 MPDMDGFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
+ G LL I + PVIMMS+ + V++ + GA D+L+KPIR+ ELKN+
Sbjct: 151 TSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELKNL 210
Query: 146 WQHVVRK 152
WQHV R+
Sbjct: 211 WQHVWRR 217
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|379025744|dbj|BAL63649.1| pseudo-response regulator [Triticum durum]
gi|379025748|dbj|BAL63651.1| pseudo-response regulator [Triticum durum]
gi|379025762|dbj|BAL63658.1| pseudo-response regulator [Triticum durum]
gi|379025764|dbj|BAL63659.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|379025736|dbj|BAL63645.1| pseudo-response regulator [Triticum durum]
gi|379025738|dbj|BAL63646.1| pseudo-response regulator [Triticum durum]
gi|379025740|dbj|BAL63647.1| pseudo-response regulator [Triticum durum]
gi|379025746|dbj|BAL63650.1| pseudo-response regulator [Triticum durum]
gi|379025750|dbj|BAL63652.1| pseudo-response regulator [Triticum durum]
gi|379025752|dbj|BAL63653.1| pseudo-response regulator [Triticum durum]
gi|379025754|dbj|BAL63654.1| pseudo-response regulator [Triticum durum]
gi|379025756|dbj|BAL63655.1| pseudo-response regulator [Triticum durum]
gi|379025758|dbj|BAL63656.1| pseudo-response regulator [Triticum durum]
gi|379025760|dbj|BAL63657.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|456359104|dbj|BAM93381.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359106|dbj|BAM93382.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359108|dbj|BAM93383.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359116|dbj|BAM93387.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 150 VRK 152
R+
Sbjct: 151 WRR 153
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|456359120|dbj|BAM93389.1| pseudo-response regulator [Triticum urartu]
gi|456359122|dbj|BAM93390.1| pseudo-response regulator [Triticum urartu]
gi|456359124|dbj|BAM93391.1| pseudo-response regulator [Triticum urartu]
gi|456359126|dbj|BAM93392.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|379025742|dbj|BAL63648.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|379025682|dbj|BAL63618.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|456359102|dbj|BAM93380.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 150 VRK 152
R+
Sbjct: 151 WRR 153
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|159154683|gb|ABW93669.1| pseudo-response regulator [Triticum turgidum]
gi|379025504|dbj|BAL63529.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025524|dbj|BAL63539.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025530|dbj|BAL63542.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025532|dbj|BAL63543.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025536|dbj|BAL63545.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025544|dbj|BAL63549.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025546|dbj|BAL63550.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025548|dbj|BAL63551.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025550|dbj|BAL63552.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025552|dbj|BAL63553.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025554|dbj|BAL63554.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025556|dbj|BAL63555.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025558|dbj|BAL63556.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025560|dbj|BAL63557.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025562|dbj|BAL63558.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025564|dbj|BAL63559.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025642|dbj|BAL63598.1| pseudo-response regulator [Triticum durum]
gi|379025766|dbj|BAL63660.1| pseudo-response regulator [Triticum durum]
gi|456359070|dbj|BAM93364.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359090|dbj|BAM93374.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359200|dbj|BAM93429.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
gi|456359202|dbj|BAM93430.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359210|dbj|BAM93434.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359212|dbj|BAM93435.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359218|dbj|BAM93438.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|456359266|dbj|BAM93462.1| pseudo-response regulator [Triticum dicoccoides]
Length = 659
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|456359186|dbj|BAM93422.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|351729027|ref|ZP_08946718.1| CheA signal transduction histidine kinase [Acidovorax radicis N35]
Length = 2017
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 87/158 (55%), Gaps = 17/158 (10%)
Query: 2 AALQRIVQSSGGSGYGSSRAA-DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNV 60
A L ++++ G SG G S + +A P Q P VLVVDD IT R+ +++L+R Y V
Sbjct: 1862 AGLPSVLEADGSSGAGKSVVSPQLAGPSQVPL---VLVVDDSITVRRVTQRLLQREGYRV 1918
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIMMSA--- 114
+ AL+ L+E + VVLSD+ MP MDGF L +I G DLP+IM+++
Sbjct: 1919 ALAADGLQALERLQEERPT--VVLSDIEMPRMDGFDLARNIRADGALRDLPIIMITSRIA 1976
Query: 115 -DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 151
R A+ G+ H YL KP +EEL ++ QH R
Sbjct: 1977 EKHREHAMELGVNH----YLGKPYSDEELLSLIQHYAR 2010
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|118638616|gb|ABL09464.1| pseudo-response regulator [Triticum aestivum]
gi|118638620|gb|ABL09466.1| pseudo-response regulator [Triticum aestivum]
gi|118638622|gb|ABL09467.1| pseudo-response regulator [Triticum aestivum]
gi|379025454|dbj|BAL63504.1| pseudo-response regulator [Triticum turgidum]
gi|379025456|dbj|BAL63505.1| pseudo-response regulator [Triticum turgidum]
gi|379025458|dbj|BAL63506.1| pseudo-response regulator [Triticum turgidum]
gi|379025460|dbj|BAL63507.1| pseudo-response regulator [Triticum turgidum]
gi|379025462|dbj|BAL63508.1| pseudo-response regulator [Triticum turgidum]
gi|379025464|dbj|BAL63509.1| pseudo-response regulator [Triticum carthlicum]
gi|379025466|dbj|BAL63510.1| pseudo-response regulator [Triticum carthlicum]
gi|379025468|dbj|BAL63511.1| pseudo-response regulator [Triticum carthlicum]
gi|379025470|dbj|BAL63512.1| pseudo-response regulator [Triticum carthlicum]
gi|379025472|dbj|BAL63513.1| pseudo-response regulator [Triticum carthlicum]
gi|379025474|dbj|BAL63514.1| pseudo-response regulator [Triticum turanicum]
gi|379025476|dbj|BAL63515.1| pseudo-response regulator [Triticum turanicum]
gi|379025478|dbj|BAL63516.1| pseudo-response regulator [Triticum turanicum]
gi|379025482|dbj|BAL63518.1| pseudo-response regulator [Triticum turanicum]
gi|379025490|dbj|BAL63522.1| pseudo-response regulator [Triticum polonicum]
gi|379025492|dbj|BAL63523.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025494|dbj|BAL63524.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025496|dbj|BAL63525.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025498|dbj|BAL63526.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025500|dbj|BAL63527.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025502|dbj|BAL63528.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025512|dbj|BAL63533.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025514|dbj|BAL63534.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025518|dbj|BAL63536.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025528|dbj|BAL63541.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025534|dbj|BAL63544.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025538|dbj|BAL63546.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025540|dbj|BAL63547.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025568|dbj|BAL63561.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025570|dbj|BAL63562.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025572|dbj|BAL63563.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025698|dbj|BAL63626.1| pseudo-response regulator [Triticum durum]
gi|379025700|dbj|BAL63627.1| pseudo-response regulator [Triticum durum]
gi|379025702|dbj|BAL63628.1| pseudo-response regulator [Triticum durum]
gi|379025704|dbj|BAL63629.1| pseudo-response regulator [Triticum durum]
gi|379025706|dbj|BAL63630.1| pseudo-response regulator [Triticum durum]
gi|379025708|dbj|BAL63631.1| pseudo-response regulator [Triticum durum]
gi|379025710|dbj|BAL63632.1| pseudo-response regulator [Triticum durum]
gi|379025712|dbj|BAL63633.1| pseudo-response regulator [Triticum durum]
gi|379025714|dbj|BAL63634.1| pseudo-response regulator [Triticum durum]
gi|379025716|dbj|BAL63635.1| pseudo-response regulator [Triticum durum]
gi|379025718|dbj|BAL63636.1| pseudo-response regulator [Triticum durum]
gi|379025720|dbj|BAL63637.1| pseudo-response regulator [Triticum durum]
gi|379025722|dbj|BAL63638.1| pseudo-response regulator [Triticum durum]
gi|379025724|dbj|BAL63639.1| pseudo-response regulator [Triticum durum]
gi|379025726|dbj|BAL63640.1| pseudo-response regulator [Triticum durum]
gi|379025728|dbj|BAL63641.1| pseudo-response regulator [Triticum durum]
gi|379025730|dbj|BAL63642.1| pseudo-response regulator [Triticum durum]
gi|379025732|dbj|BAL63643.1| pseudo-response regulator [Triticum durum]
gi|395759117|dbj|BAM31255.1| pseudo-response regulator [Triticum aestivum]
gi|395759119|dbj|BAM31256.1| pseudo-response regulator [Triticum aestivum]
gi|456359198|dbj|BAM93428.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 668
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|330831457|ref|YP_004394409.1| two-component system response regulator [Aeromonas veronii B565]
gi|406675314|ref|ZP_11082503.1| hypothetical protein HMPREF1170_00711 [Aeromonas veronii AMC35]
gi|423203229|ref|ZP_17189807.1| hypothetical protein HMPREF1167_03390 [Aeromonas veronii AER39]
gi|423211893|ref|ZP_17198426.1| hypothetical protein HMPREF1169_03944 [Aeromonas veronii AER397]
gi|328806593|gb|AEB51792.1| Two-component system response regulator [Aeromonas veronii B565]
gi|404612694|gb|EKB09752.1| hypothetical protein HMPREF1169_03944 [Aeromonas veronii AER397]
gi|404613458|gb|EKB10480.1| hypothetical protein HMPREF1167_03390 [Aeromonas veronii AER39]
gi|404627646|gb|EKB24446.1| hypothetical protein HMPREF1170_00711 [Aeromonas veronii AMC35]
Length = 426
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD++ L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDVSLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMAGMDG 60
Query: 95 FKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
L E I + + LPVI+M+A G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQAQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPINKDELFATIEHAL 117
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|379025520|dbj|BAL63537.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025522|dbj|BAL63538.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359208|dbj|BAM93433.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|379025778|dbj|BAL63666.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 150 VRK 152
R+
Sbjct: 163 WRR 165
>gi|456359140|dbj|BAM93399.1| pseudo-response regulator [Triticum urartu]
gi|456359142|dbj|BAM93400.1| pseudo-response regulator [Triticum urartu]
gi|456359144|dbj|BAM93401.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|379025862|dbj|BAL63708.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|456359204|dbj|BAM93431.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|456359164|dbj|BAM93411.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|456359146|dbj|BAM93402.1| pseudo-response regulator [Triticum urartu]
gi|456359148|dbj|BAM93403.1| pseudo-response regulator [Triticum urartu]
gi|456359150|dbj|BAM93404.1| pseudo-response regulator [Triticum urartu]
gi|456359152|dbj|BAM93405.1| pseudo-response regulator [Triticum urartu]
gi|456359154|dbj|BAM93406.1| pseudo-response regulator [Triticum urartu]
gi|456359156|dbj|BAM93407.1| pseudo-response regulator [Triticum urartu]
gi|456359158|dbj|BAM93408.1| pseudo-response regulator [Triticum urartu]
gi|456359160|dbj|BAM93409.1| pseudo-response regulator [Triticum urartu]
gi|456359162|dbj|BAM93410.1| pseudo-response regulator [Triticum urartu]
gi|456359166|dbj|BAM93412.1| pseudo-response regulator [Triticum urartu]
gi|456359168|dbj|BAM93413.1| pseudo-response regulator [Triticum urartu]
gi|456359170|dbj|BAM93414.1| pseudo-response regulator [Triticum urartu]
gi|456359172|dbj|BAM93415.1| pseudo-response regulator [Triticum urartu]
gi|456359174|dbj|BAM93416.1| pseudo-response regulator [Triticum urartu]
gi|456359176|dbj|BAM93417.1| pseudo-response regulator [Triticum urartu]
gi|456359178|dbj|BAM93418.1| pseudo-response regulator [Triticum urartu]
gi|456359180|dbj|BAM93419.1| pseudo-response regulator [Triticum urartu]
gi|456359182|dbj|BAM93420.1| pseudo-response regulator [Triticum urartu]
gi|456359184|dbj|BAM93421.1| pseudo-response regulator [Triticum urartu]
gi|456359188|dbj|BAM93423.1| pseudo-response regulator [Triticum urartu]
gi|456359190|dbj|BAM93424.1| pseudo-response regulator [Triticum urartu]
gi|456359192|dbj|BAM93425.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|456359128|dbj|BAM93393.1| pseudo-response regulator [Triticum urartu]
gi|456359130|dbj|BAM93394.1| pseudo-response regulator [Triticum urartu]
gi|456359132|dbj|BAM93395.1| pseudo-response regulator [Triticum urartu]
gi|456359134|dbj|BAM93396.1| pseudo-response regulator [Triticum urartu]
gi|456359136|dbj|BAM93397.1| pseudo-response regulator [Triticum urartu]
gi|456359138|dbj|BAM93398.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|379025858|dbj|BAL63706.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 150 VRK 152
R+
Sbjct: 156 WRR 158
>gi|379025856|dbj|BAL63705.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025860|dbj|BAL63707.1| pseudo-response regulator [Triticum dicoccoides]
gi|379026014|dbj|BAL63784.1| pseudo-response regulator [Triticum durum]
gi|379026016|dbj|BAL63785.1| pseudo-response regulator [Triticum durum]
gi|379026018|dbj|BAL63786.1| pseudo-response regulator [Triticum durum]
gi|379026020|dbj|BAL63787.1| pseudo-response regulator [Triticum durum]
gi|379026022|dbj|BAL63788.1| pseudo-response regulator [Triticum durum]
gi|379026024|dbj|BAL63789.1| pseudo-response regulator [Triticum durum]
gi|456359268|dbj|BAM93463.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 150 VRK 152
R+
Sbjct: 156 WRR 158
>gi|379025940|dbj|BAL63747.1| pseudo-response regulator [Triticum carthlicum]
gi|456359264|dbj|BAM93461.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|379025838|dbj|BAL63696.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025840|dbj|BAL63697.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025842|dbj|BAL63698.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025844|dbj|BAL63699.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 661
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|118638628|gb|ABL09470.1| pseudo-response regulator [Triticum aestivum]
gi|118638630|gb|ABL09471.1| pseudo-response regulator [Triticum aestivum]
gi|118638632|gb|ABL09472.1| pseudo-response regulator [Triticum aestivum]
gi|118638634|gb|ABL09473.1| pseudo-response regulator [Triticum aestivum]
gi|118638636|gb|ABL09474.1| pseudo-response regulator [Triticum aestivum]
gi|118638638|gb|ABL09475.1| pseudo-response regulator [Triticum aestivum]
gi|118638640|gb|ABL09476.1| pseudo-response regulator [Triticum aestivum]
gi|159138015|gb|ABW89014.1| pseudo-response regulator [Triticum turgidum]
gi|159138017|gb|ABW89015.1| pseudo-response regulator [Triticum turgidum]
gi|159138019|gb|ABW89016.1| pseudo-response regulator [Triticum turgidum]
gi|159138021|gb|ABW89017.1| pseudo-response regulator [Triticum turgidum]
gi|379025772|dbj|BAL63663.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025774|dbj|BAL63664.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025776|dbj|BAL63665.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025780|dbj|BAL63667.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025782|dbj|BAL63668.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025784|dbj|BAL63669.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025786|dbj|BAL63670.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025788|dbj|BAL63671.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025790|dbj|BAL63672.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025792|dbj|BAL63673.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025794|dbj|BAL63674.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025796|dbj|BAL63675.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025800|dbj|BAL63677.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025802|dbj|BAL63678.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025804|dbj|BAL63679.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025806|dbj|BAL63680.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025808|dbj|BAL63681.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025810|dbj|BAL63682.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025812|dbj|BAL63683.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025814|dbj|BAL63684.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025816|dbj|BAL63685.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025818|dbj|BAL63686.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025820|dbj|BAL63687.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025822|dbj|BAL63688.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025824|dbj|BAL63689.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025826|dbj|BAL63690.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025828|dbj|BAL63691.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025830|dbj|BAL63692.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025832|dbj|BAL63693.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025834|dbj|BAL63694.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025836|dbj|BAL63695.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025850|dbj|BAL63702.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025852|dbj|BAL63703.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025854|dbj|BAL63704.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025864|dbj|BAL63709.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025866|dbj|BAL63710.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025868|dbj|BAL63711.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025870|dbj|BAL63712.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025872|dbj|BAL63713.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025874|dbj|BAL63714.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025876|dbj|BAL63715.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025878|dbj|BAL63716.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025880|dbj|BAL63717.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025882|dbj|BAL63718.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025884|dbj|BAL63719.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025886|dbj|BAL63720.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025888|dbj|BAL63721.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025892|dbj|BAL63723.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025912|dbj|BAL63733.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025914|dbj|BAL63734.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025916|dbj|BAL63735.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025918|dbj|BAL63736.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025920|dbj|BAL63737.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025922|dbj|BAL63738.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025926|dbj|BAL63740.1| pseudo-response regulator [Triticum turgidum]
gi|379025928|dbj|BAL63741.1| pseudo-response regulator [Triticum turgidum]
gi|379025930|dbj|BAL63742.1| pseudo-response regulator [Triticum turgidum]
gi|379025932|dbj|BAL63743.1| pseudo-response regulator [Triticum turgidum]
gi|379025934|dbj|BAL63744.1| pseudo-response regulator [Triticum carthlicum]
gi|379025938|dbj|BAL63746.1| pseudo-response regulator [Triticum carthlicum]
gi|379025942|dbj|BAL63748.1| pseudo-response regulator [Triticum carthlicum]
gi|379025944|dbj|BAL63749.1| pseudo-response regulator [Triticum durum]
gi|379025946|dbj|BAL63750.1| pseudo-response regulator [Triticum durum]
gi|379025948|dbj|BAL63751.1| pseudo-response regulator [Triticum durum]
gi|379025950|dbj|BAL63752.1| pseudo-response regulator [Triticum durum]
gi|379025952|dbj|BAL63753.1| pseudo-response regulator [Triticum durum]
gi|379025954|dbj|BAL63754.1| pseudo-response regulator [Triticum durum]
gi|379025956|dbj|BAL63755.1| pseudo-response regulator [Triticum durum]
gi|379025958|dbj|BAL63756.1| pseudo-response regulator [Triticum durum]
gi|379025960|dbj|BAL63757.1| pseudo-response regulator [Triticum durum]
gi|379025962|dbj|BAL63758.1| pseudo-response regulator [Triticum durum]
gi|379025964|dbj|BAL63759.1| pseudo-response regulator [Triticum durum]
gi|379025966|dbj|BAL63760.1| pseudo-response regulator [Triticum durum]
gi|379025968|dbj|BAL63761.1| pseudo-response regulator [Triticum durum]
gi|379025970|dbj|BAL63762.1| pseudo-response regulator [Triticum durum]
gi|379025972|dbj|BAL63763.1| pseudo-response regulator [Triticum durum]
gi|379025974|dbj|BAL63764.1| pseudo-response regulator [Triticum durum]
gi|379025976|dbj|BAL63765.1| pseudo-response regulator [Triticum durum]
gi|379025978|dbj|BAL63766.1| pseudo-response regulator [Triticum durum]
gi|379025980|dbj|BAL63767.1| pseudo-response regulator [Triticum durum]
gi|379025982|dbj|BAL63768.1| pseudo-response regulator [Triticum durum]
gi|379025984|dbj|BAL63769.1| pseudo-response regulator [Triticum durum]
gi|379025986|dbj|BAL63770.1| pseudo-response regulator [Triticum durum]
gi|379025988|dbj|BAL63771.1| pseudo-response regulator [Triticum durum]
gi|379025990|dbj|BAL63772.1| pseudo-response regulator [Triticum durum]
gi|379025992|dbj|BAL63773.1| pseudo-response regulator [Triticum durum]
gi|379025994|dbj|BAL63774.1| pseudo-response regulator [Triticum durum]
gi|379025996|dbj|BAL63775.1| pseudo-response regulator [Triticum durum]
gi|379025998|dbj|BAL63776.1| pseudo-response regulator [Triticum durum]
gi|379026000|dbj|BAL63777.1| pseudo-response regulator [Triticum durum]
gi|379026002|dbj|BAL63778.1| pseudo-response regulator [Triticum durum]
gi|379026004|dbj|BAL63779.1| pseudo-response regulator [Triticum durum]
gi|379026006|dbj|BAL63780.1| pseudo-response regulator [Triticum durum]
gi|379026008|dbj|BAL63781.1| pseudo-response regulator [Triticum durum]
gi|379026010|dbj|BAL63782.1| pseudo-response regulator [Triticum durum]
gi|379026012|dbj|BAL63783.1| pseudo-response regulator [Triticum durum]
gi|379026062|dbj|BAL63808.1| pseudo-response regulator [Triticum durum]
gi|379026064|dbj|BAL63809.1| pseudo-response regulator [Triticum durum]
gi|379026066|dbj|BAL63810.1| pseudo-response regulator [Triticum durum]
gi|379026068|dbj|BAL63811.1| pseudo-response regulator [Triticum durum]
gi|379026070|dbj|BAL63812.1| pseudo-response regulator [Triticum durum]
gi|379026084|dbj|BAL63819.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|383215300|gb|AFG73164.1| pseudo-response regulator [Triticum aestivum]
gi|395759121|dbj|BAM31257.1| pseudo-response regulator [Triticum aestivum]
gi|395759123|dbj|BAM31258.1| pseudo-response regulator [Triticum aestivum]
gi|456359244|dbj|BAM93451.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359246|dbj|BAM93452.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359270|dbj|BAM93464.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359272|dbj|BAM93465.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359274|dbj|BAM93466.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359276|dbj|BAM93467.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359278|dbj|BAM93468.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359280|dbj|BAM93469.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359282|dbj|BAM93470.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359284|dbj|BAM93471.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359286|dbj|BAM93472.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 664
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|379025890|dbj|BAL63722.1| pseudo-response regulator [Triticum dicoccoides]
Length = 660
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 150 VRK 152
R+
Sbjct: 156 WRR 158
>gi|379026042|dbj|BAL63798.1| pseudo-response regulator [Triticum durum]
Length = 665
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 150 VRK 152
R+
Sbjct: 156 WRR 158
>gi|379025768|dbj|BAL63661.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025770|dbj|BAL63662.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025894|dbj|BAL63724.1| pseudo-response regulator [Triticum turanicum]
gi|379025896|dbj|BAL63725.1| pseudo-response regulator [Triticum turanicum]
gi|379025898|dbj|BAL63726.1| pseudo-response regulator [Triticum turanicum]
gi|379025900|dbj|BAL63727.1| pseudo-response regulator [Triticum turanicum]
gi|379025902|dbj|BAL63728.1| pseudo-response regulator [Triticum turanicum]
gi|379025910|dbj|BAL63732.1| pseudo-response regulator [Triticum polonicum]
gi|379025936|dbj|BAL63745.1| pseudo-response regulator [Triticum carthlicum]
gi|379026026|dbj|BAL63790.1| pseudo-response regulator [Triticum durum]
gi|379026028|dbj|BAL63791.1| pseudo-response regulator [Triticum durum]
gi|379026030|dbj|BAL63792.1| pseudo-response regulator [Triticum durum]
gi|379026032|dbj|BAL63793.1| pseudo-response regulator [Triticum durum]
gi|379026034|dbj|BAL63794.1| pseudo-response regulator [Triticum durum]
gi|379026036|dbj|BAL63795.1| pseudo-response regulator [Triticum durum]
gi|379026038|dbj|BAL63796.1| pseudo-response regulator [Triticum durum]
gi|379026040|dbj|BAL63797.1| pseudo-response regulator [Triticum durum]
gi|379026044|dbj|BAL63799.1| pseudo-response regulator [Triticum durum]
gi|379026046|dbj|BAL63800.1| pseudo-response regulator [Triticum durum]
gi|379026048|dbj|BAL63801.1| pseudo-response regulator [Triticum durum]
gi|379026050|dbj|BAL63802.1| pseudo-response regulator [Triticum durum]
gi|379026052|dbj|BAL63803.1| pseudo-response regulator [Triticum durum]
gi|379026054|dbj|BAL63804.1| pseudo-response regulator [Triticum durum]
gi|379026056|dbj|BAL63805.1| pseudo-response regulator [Triticum durum]
gi|379026058|dbj|BAL63806.1| pseudo-response regulator [Triticum durum]
gi|379026060|dbj|BAL63807.1| pseudo-response regulator [Triticum durum]
gi|379026072|dbj|BAL63813.1| pseudo-response regulator [Triticum durum]
gi|379026074|dbj|BAL63814.1| pseudo-response regulator [Triticum durum]
gi|379026076|dbj|BAL63815.1| pseudo-response regulator [Triticum durum]
gi|379026078|dbj|BAL63816.1| pseudo-response regulator [Triticum durum]
gi|379026080|dbj|BAL63817.1| pseudo-response regulator [Triticum durum]
gi|456359288|dbj|BAM93473.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 665
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 150 VRK 152
R+
Sbjct: 156 WRR 158
>gi|379025516|dbj|BAL63535.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359206|dbj|BAM93432.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|379025798|dbj|BAL63676.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|456359262|dbj|BAM93460.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 150 VRK 152
R+
Sbjct: 156 WRR 158
>gi|379025488|dbj|BAL63521.1| pseudo-response regulator [Triticum polonicum]
gi|379025734|dbj|BAL63644.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|413925155|gb|AFW65087.1| hypothetical protein ZEAMMB73_389889 [Zea mays]
Length = 319
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 69 ALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGI 125
A ++RER FD+VL++V MP + G +LL I ++PV+MMS+ + V++ +
Sbjct: 3 AWGVMRERAYAFDLVLTEVAMPSLSGIQLLSRIVAADECKNIPVVMMSSQDSIGTVLKCM 62
Query: 126 RHGACDYLIKPIREEELKNIWQHVVRK 152
+ GA D+L+KP+R+ EL+N+WQHV R+
Sbjct: 63 QKGAVDFLVKPVRKNELRNLWQHVWRR 89
>gi|356495556|ref|XP_003516642.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 533
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A D+ FP GLRVL+++ D + + + L YNV+T AL L F
Sbjct: 5 ANDLQEWKDFPKGLRVLLLEGDSSSAAEIREQLEAVDYNVSTFYDENEALSALSSSPEGF 64
Query: 81 DVVLSDVHMP-DMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIRE 139
V + +V + GFK LE+ DLP IM S D ++ +M+ I GA ++L KP+ E
Sbjct: 65 HVAIVEVSTSCSLGGFKFLEN---SKDLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSE 121
Query: 140 EELKNIWQHVVRKRWN 155
++LKNIWQHVV K +N
Sbjct: 122 DKLKNIWQHVVHKAFN 137
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 275
KK +V W+ ELH++FV AV QLGID+A+P RILE+M V GLTR NVASHLQ+ + K
Sbjct: 287 KKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRIHK 343
>gi|456359290|dbj|BAM93474.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 664
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTQQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|124003289|ref|ZP_01688139.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
gi|123991387|gb|EAY30818.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
Length = 1269
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 76/133 (57%), Gaps = 4/133 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+++LVVDD+ L++LE L YN+T S AL I++E K FD++L DV MP M
Sbjct: 885 VKILVVDDEPVNLQVLENHLSIQNYNITQASDGLKALKIIKESKEPFDIILLDVMMPKMS 944
Query: 94 GFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEE-LKNIWQHV 149
G+++ I ++LPV+M++A + ++ G GA DYL KP + E L I HV
Sbjct: 945 GYEVCRTIRERFPLVELPVLMLTAKNQPKDIVEGFDAGANDYLTKPFSKVELLSRIKTHV 1004
Query: 150 VRKRWNENKEHEN 162
+ K +EN + N
Sbjct: 1005 LLKLTSENLQTAN 1017
>gi|379025542|dbj|BAL63548.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PV+MMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVVMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|145352641|ref|XP_001420647.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580882|gb|ABO98940.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 255
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
Query: 218 TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 277
+K+ R+VW+ +LH QF++AV +LG+ AVPK I+++MNV GLTRENVASH LQK+R
Sbjct: 107 SKRQRLVWTPQLHAQFIAAVQKLGVKTAVPKAIMKIMNVKGLTRENVASH-----LQKYR 161
Query: 278 LYLKRLNGVSQQGGITNSFCAPIETNVKLG 307
L LKR S+ + ++V+ G
Sbjct: 162 LTLKRAQDSSESTRASGDATDAKRSDVRAG 191
>gi|456359110|dbj|BAM93384.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDLMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 150 VRK 152
R+
Sbjct: 151 WRR 153
>gi|153004813|ref|YP_001379138.1| two component sigma54 specific Fis family transcriptional regulator
[Anaeromyxobacter sp. Fw109-5]
gi|152028386|gb|ABS26154.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter sp. Fw109-5]
Length = 470
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VL+VDD++ R+L ML+R Y VTT + AL +L K VV++D+ MP + G
Sbjct: 4 VLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVLH--KTPVHVVVTDLVMPKVGGM 61
Query: 96 KLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 151
+LL +G + D+PVIM++A G V + + ++ GA DY+ KP ++ELK + R
Sbjct: 62 ELLRRVGADFPDVPVIMITAHGSVDSAVGALKAGAFDYITKPFEQDELKKVIAKAAR 118
>gi|298249478|ref|ZP_06973282.1| response regulator receiver sensor signal transduction histidine
kinase [Ktedonobacter racemifer DSM 44963]
gi|297547482|gb|EFH81349.1| response regulator receiver sensor signal transduction histidine
kinase [Ktedonobacter racemifer DSM 44963]
Length = 432
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 96/177 (54%), Gaps = 18/177 (10%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYN--VTTCSQAAVALDILRERKGCFDVVLSDVHM 89
A R+LVVDDD L+ L MLR L N V T A +AL+++R + +DV++SD+ M
Sbjct: 6 ADARLLVVDDDPALLQALPHMLRLRLQNLHVDTAESAQLALELVRAQ--SYDVIVSDIKM 63
Query: 90 PDMDGFKLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
P MDGF LL + L+ + PV++++ G +R +R GA DY++KPI ++ +
Sbjct: 64 PGMDGFDLLTALQDLQSETPVLLITGHGEHDLAIRALRGGAYDYILKPIDRDDFAAAVRR 123
Query: 149 VV-------RKRWNENKEHENSGSLEETDHHKRGSDEIEYA----SSVNEGTEGTFK 194
+ R + + + + + SLE + + ++E++ A +SVNE E +
Sbjct: 124 AIDTAQLRQRVKHQQQELEQYAASLERQVYQR--TEELQQANVALASVNESREQMLR 178
>gi|145297354|ref|YP_001140195.1| two-component system response regulator [Aeromonas salmonicida
subsp. salmonicida A449]
gi|418362107|ref|ZP_12962751.1| two-component system response regulator [Aeromonas salmonicida
subsp. salmonicida 01-B526]
gi|142850126|gb|ABO88447.1| two-component system response regulator [Aeromonas salmonicida
subsp. salmonicida A449]
gi|356686742|gb|EHI51335.1| two-component system response regulator [Aeromonas salmonicida
subsp. salmonicida 01-B526]
Length = 426
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD++ L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDVSLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMAGMDG 60
Query: 95 FKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
L E I + + LPVI+M+A G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQSQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPIDKDELFATIEHAL 117
>gi|347819602|ref|ZP_08873036.1| CheA signal transduction histidine kinase [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 1438
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 12/136 (8%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A+ +A P Q P VLVVDD IT R+ +++L+R Y V + AL+ L+E +
Sbjct: 1303 ASPLAGPSQVPL---VLVVDDSITVRRVTQRLLQREGYRVALAADGLQALERLQEERPT- 1358
Query: 81 DVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADGRVSAVMR--GIRHGACDYLIK 135
VVLSD+ MP MDGF L +I G DLP+IM+++ R++ R I G YL K
Sbjct: 1359 -VVLSDIEMPRMDGFDLARNIRADGALRDLPIIMITS--RIAEKHREHAIELGVNHYLGK 1415
Query: 136 PIREEELKNIWQHVVR 151
P +EEL N+ QH VR
Sbjct: 1416 PYSDEELLNLIQHYVR 1431
>gi|66809777|ref|XP_638612.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
gi|3183160|sp|Q23917.1|PDE2_DICDI RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase regA;
Short=PDEase regA; AltName: Full=Phosphodiesterase 2;
Short=DdPDE2; AltName: Full=Response regulator protein
A; AltName: Full=cAMP-specific 3',5'-cAMP
phosphodiesterase 2
gi|1405368|gb|AAB03508.1| RegA [Dictyostelium discoideum]
gi|3046777|emb|CAA06513.1| RegA [Dictyostelium discoideum]
gi|60467179|gb|EAL65213.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
Length = 793
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 17 GSSRAADVAVPDQF-PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRE 75
S R +D + D++ P+ +R+LV DDD +IL +L++ YNVT +A + + +
Sbjct: 144 SSHRVSDFS--DEYSPSKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINK 201
Query: 76 RKGCFDVVLSDVHMPDMDGFKLLEHIG---LEMDLPVIMMSADG-RVSAVMRGIRHGACD 131
+ +D+VL+DV MP + GF LL+ I + +PVI+MS I+ G D
Sbjct: 202 GQQKYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQD 261
Query: 132 YLIKPIREEELKNIWQHVVRKRWNENKEHENSGSL 166
+L KPI +E LK V++ W KE E +L
Sbjct: 262 FLTKPIAKELLKKKIDTVLQSIWQRRKEEEYKATL 296
>gi|71067066|dbj|BAE16285.1| SbPCL1 [Sorghum bicolor]
Length = 200
Score = 85.1 bits (209), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 5/65 (7%)
Query: 218 TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 277
+K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTRENVASH LQK+R
Sbjct: 141 SKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKYR 195
Query: 278 LYLKR 282
LY+KR
Sbjct: 196 LYVKR 200
>gi|456359112|dbj|BAM93385.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359118|dbj|BAM93388.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 31 IRVLLVETDDSTRQVVIALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 150 VRK 152
R+
Sbjct: 151 WRR 153
>gi|449450912|ref|XP_004143206.1| PREDICTED: uncharacterized protein LOC101203812 [Cucumis sativus]
gi|449496718|ref|XP_004160206.1| PREDICTED: uncharacterized protein LOC101226439 [Cucumis sativus]
Length = 297
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 5/66 (7%)
Query: 217 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 276
T K+PR+ W+ +LH++FV V+ LG+ A PK I+++MNV GLTRENVASH LQK+
Sbjct: 147 TLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASH-----LQKY 201
Query: 277 RLYLKR 282
RLYLKR
Sbjct: 202 RLYLKR 207
>gi|357131277|ref|XP_003567265.1| PREDICTED: uncharacterized protein LOC100824981 [Brachypodium
distachyon]
Length = 207
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 5/66 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK R+VW+ ELH++FV AV LG AVPK I+ LMNV GLTRENVASH LQK+RL
Sbjct: 100 KKARMVWTTELHRRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASH-----LQKYRL 154
Query: 279 YLKRLN 284
YLKRL+
Sbjct: 155 YLKRLH 160
>gi|379025574|dbj|BAL63564.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL+++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|423204367|ref|ZP_17190923.1| hypothetical protein HMPREF1168_00558 [Aeromonas veronii AMC34]
gi|404627232|gb|EKB24037.1| hypothetical protein HMPREF1168_00558 [Aeromonas veronii AMC34]
Length = 426
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD++ L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDVSLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMGGMDG 60
Query: 95 FKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
L E I + + LPVI+M+A G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQAQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPINKDELLATIEHAL 117
>gi|379025576|dbj|BAL63565.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025578|dbj|BAL63566.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025580|dbj|BAL63567.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025582|dbj|BAL63568.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359194|dbj|BAM93426.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359196|dbj|BAM93427.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359220|dbj|BAM93439.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359222|dbj|BAM93440.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL+++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|149919982|ref|ZP_01908457.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
gi|149819255|gb|EDM78689.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
Length = 513
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRER-KGCFDVVLSDVHMPDMD 93
RVLVVDD+ ++L +L + Y V T A AL ++ +G FDVV+SD+ MP+MD
Sbjct: 7 RVLVVDDEPNLRKVLGALLMQLGYEVLTEPDGASALARVKSAPRGTFDVVISDLRMPNMD 66
Query: 94 GFKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
G LLE + E LPVI+++A G V ++ ++ GA D+L KP +++ ++ V+
Sbjct: 67 GMALLEALTAEDSSLPVIILTAHGTVDTAVQAVKKGAFDFLEKPFERDQIDHLVSKAVKT 126
Query: 153 R 153
R
Sbjct: 127 R 127
>gi|456359092|dbj|BAM93375.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359094|dbj|BAM93376.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359096|dbj|BAM93377.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359098|dbj|BAM93378.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359100|dbj|BAM93379.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359224|dbj|BAM93441.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL+++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|456359072|dbj|BAM93365.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359074|dbj|BAM93366.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359076|dbj|BAM93367.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359078|dbj|BAM93368.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359080|dbj|BAM93369.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359082|dbj|BAM93370.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359084|dbj|BAM93371.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359086|dbj|BAM93372.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359088|dbj|BAM93373.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 668
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL+++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|118638626|gb|ABL09469.1| truncated pseudo-response regulator [Triticum aestivum]
gi|383215295|gb|AFG73160.1| pseudo-response regulator [Triticum aestivum]
Length = 432
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|303283994|ref|XP_003061288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457639|gb|EEH54938.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 711
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L VL+V+DD + L ++ MLR C ++VTT + A+D L + D+VL+D+ MP++D
Sbjct: 53 LSVLLVEDDHSTLVFVKAMLRSCGHSVTTATNGQEAIDALLDPSSAIDLVLTDIMMPEVD 112
Query: 94 GFKLLEHIGLE----MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G +L++ + +P+I+MS + GA DYL+KP+++ ++ ++ +H
Sbjct: 113 GLELMKIVQSSDKPFRSIPIIVMSTVDSDEFQAKCTEAGAQDYLVKPVKKAQMADLARHT 172
Query: 150 V--RKRWNENKEHE-NSGSLEETDHHKRG 175
V + ++ H NSG+ ET +RG
Sbjct: 173 VGGGAGMSVDRIHSNNSGASTETAQGRRG 201
>gi|365087760|ref|ZP_09327646.1| CheA signal transduction histidine kinase [Acidovorax sp. NO-1]
gi|363417383|gb|EHL24463.1| CheA signal transduction histidine kinase [Acidovorax sp. NO-1]
Length = 2027
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 17/158 (10%)
Query: 2 AALQRIVQSSGGSGYGSSRAA-DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNV 60
A L ++++ G SG G + + +A P Q P VLVVDD IT R+ +++L+R Y V
Sbjct: 1872 AGLPPVLEADGSSGAGKAVVSPQLAGPSQVPL---VLVVDDSITVRRVTQRLLQREGYRV 1928
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIMMSA--- 114
+ AL+ L+E + VVLSD+ MP MDGF L +I G DLP+IM+++
Sbjct: 1929 ALAADGLQALERLQEERPT--VVLSDIEMPRMDGFDLARNIRADGALRDLPIIMITSRIA 1986
Query: 115 -DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 151
R A+ G+ H YL KP +EEL ++ QH R
Sbjct: 1987 EKHREHAMELGVNH----YLGKPYSDEELLSLIQHYAR 2020
>gi|159154677|gb|ABW93666.1| pseudo-response regulator [Triticum turgidum]
gi|159154679|gb|ABW93667.1| pseudo-response regulator [Triticum turgidum]
gi|159154681|gb|ABW93668.1| pseudo-response regulator [Triticum turgidum]
gi|379025480|dbj|BAL63517.1| pseudo-response regulator [Triticum turanicum]
gi|379025484|dbj|BAL63519.1| pseudo-response regulator [Triticum turanicum]
gi|379025486|dbj|BAL63520.1| pseudo-response regulator [Triticum turanicum]
gi|379025566|dbj|BAL63560.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025644|dbj|BAL63599.1| pseudo-response regulator [Triticum durum]
gi|379025646|dbj|BAL63600.1| pseudo-response regulator [Triticum durum]
gi|379025648|dbj|BAL63601.1| pseudo-response regulator [Triticum durum]
gi|379025650|dbj|BAL63602.1| pseudo-response regulator [Triticum durum]
gi|379025652|dbj|BAL63603.1| pseudo-response regulator [Triticum durum]
gi|379025654|dbj|BAL63604.1| pseudo-response regulator [Triticum durum]
gi|379025656|dbj|BAL63605.1| pseudo-response regulator [Triticum durum]
gi|379025658|dbj|BAL63606.1| pseudo-response regulator [Triticum durum]
gi|379025660|dbj|BAL63607.1| pseudo-response regulator [Triticum durum]
gi|379025662|dbj|BAL63608.1| pseudo-response regulator [Triticum durum]
gi|379025664|dbj|BAL63609.1| pseudo-response regulator [Triticum durum]
gi|379025666|dbj|BAL63610.1| pseudo-response regulator [Triticum durum]
gi|379025668|dbj|BAL63611.1| pseudo-response regulator [Triticum durum]
gi|379025670|dbj|BAL63612.1| pseudo-response regulator [Triticum durum]
gi|379025672|dbj|BAL63613.1| pseudo-response regulator [Triticum durum]
gi|379025674|dbj|BAL63614.1| pseudo-response regulator [Triticum durum]
gi|379025676|dbj|BAL63615.1| pseudo-response regulator [Triticum durum]
gi|379025678|dbj|BAL63616.1| pseudo-response regulator [Triticum durum]
gi|379025680|dbj|BAL63617.1| pseudo-response regulator [Triticum durum]
gi|379025684|dbj|BAL63619.1| pseudo-response regulator [Triticum durum]
gi|379025686|dbj|BAL63620.1| pseudo-response regulator [Triticum durum]
gi|379025688|dbj|BAL63621.1| pseudo-response regulator [Triticum durum]
gi|379025690|dbj|BAL63622.1| pseudo-response regulator [Triticum durum]
gi|379025692|dbj|BAL63623.1| pseudo-response regulator [Triticum durum]
gi|379025694|dbj|BAL63624.1| pseudo-response regulator [Triticum durum]
gi|379025696|dbj|BAL63625.1| pseudo-response regulator [Triticum durum]
gi|379026082|dbj|BAL63818.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA ++L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|379025846|dbj|BAL63700.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025848|dbj|BAL63701.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQFIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|395759127|dbj|BAM31260.1| pseudo-response regulator [Triticum aestivum]
Length = 469
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 150 VRK 152
R+
Sbjct: 152 WRR 154
>gi|159487405|ref|XP_001701713.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280932|gb|EDP06688.1| predicted protein [Chlamydomonas reinhardtii]
Length = 61
Score = 84.3 bits (207), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 5/64 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KKPR+ WS ELH +F++A+ QLGI AVPK IL+LMNV GLTRENVASH LQK+R+
Sbjct: 3 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASH-----LQKYRI 57
Query: 279 YLKR 282
LKR
Sbjct: 58 LLKR 61
>gi|381149249|gb|AFF60407.1| golden 2-like 1 transcription factor [Solanum phureja]
Length = 460
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 184 SVNEGTEGTFKAQRKRISAKEEDDGELESDDPST--TKKPRVVWSVELHQQFVSAVNQLG 241
S + E T + + I+ KE D G+ S + + +K +V W+ ELH++FV AV QLG
Sbjct: 135 STQKSEESTLQVNQNIITPKESDKGKKSSKNNNLPGKRKVKVDWTPELHRRFVQAVEQLG 194
Query: 242 IDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 283
+DKAVP RILE+M + LTR N+ASHLQ QK+R + K L
Sbjct: 195 VDKAVPSRILEIMGIDCLTRHNIASHLQ----QKYRSHRKHL 232
>gi|403374229|gb|EJY87054.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 834
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 9/120 (7%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L+ +D+ L +L C Y VTT AL LR+ FD+VL D++MP+MDGF
Sbjct: 9 ILLAEDEQFQRLALYDILELCDYEVTTVENGKKALVELRDETREFDLVLLDLYMPEMDGF 68
Query: 96 KLL------EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
+LL E + L LPV++MSADG + +R GA DYL+KP+R +E K + +H+
Sbjct: 69 ELLTLMQEDEKLSL---LPVVVMSADGDKDIIANCLRMGAKDYLVKPVRFQECKGLVRHM 125
>gi|456359250|dbj|BAM93454.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359252|dbj|BAM93455.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359254|dbj|BAM93456.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359256|dbj|BAM93457.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359258|dbj|BAM93458.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
Length = 331
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 150 VRK 152
R+
Sbjct: 156 WRR 158
>gi|411011708|ref|ZP_11388037.1| two-component system response regulator [Aeromonas aquariorum AAK1]
Length = 426
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD + L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDASLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMAGMDG 60
Query: 95 FKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV--- 150
L E I + + LPVI+M+A G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQSQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPIDKDELFATIEHALSLT 120
Query: 151 ----RKRWN 155
R+ W
Sbjct: 121 RPKQRQEWQ 129
>gi|302817481|ref|XP_002990416.1| pseudo response regulator [Selaginella moellendorffii]
gi|300141801|gb|EFJ08509.1| pseudo response regulator [Selaginella moellendorffii]
Length = 592
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GL VLV D + +L+ C Y VT + AL + + K F + D
Sbjct: 12 FPKGLHVLVAIADGDDREEISGILQSCSYRVTAFTSEEDALAAIEKPKTPFHAAMVDATN 71
Query: 90 PDM-DGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
D+ DGFK+LE +L VIM+S+ + +MR I GA D+L KP EE+LKNIWQH
Sbjct: 72 RDIFDGFKVLE---AAKELAVIMISSTEDIETMMRAISLGAADFLQKPFSEEKLKNIWQH 128
Query: 149 VVRK 152
V RK
Sbjct: 129 VARK 132
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK +V W+ ELHQ+FV AV QLG+DKA+P RILE M V LTR N+ASH LQK+R
Sbjct: 349 KKMKVDWTPELHQKFVQAVEQLGVDKAIPSRILEHMGVKCLTRHNIASH-----LQKYRS 403
Query: 279 YLKRL 283
+ K L
Sbjct: 404 HRKHL 408
>gi|327533492|gb|AEA92684.1| TOC1 [Phaseolus vulgaris]
Length = 561
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 8/146 (5%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
SGG +G S + + +R+L+ D+D + + +L C Y VT +
Sbjct: 13 SGGGNHGKSGDGFIDR-----SKVRILLCDNDSNSSQEVFTLLLGCSYQVTLVKSPRQVI 67
Query: 71 DILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMD---LPVIMMSADGRVSAVMRGIRH 127
D L ++L+++ +P G K+L++I + + +PVIMMSA VS V++ +R
Sbjct: 68 DALNAEGQHIGIILAELDLPTKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSVVVKCLRL 127
Query: 128 GACDYLIKPIREEELKNIWQHVVRKR 153
GA DYL+KP+R EL N+W H+ +R
Sbjct: 128 GAADYLVKPLRTNELLNLWMHMWGRR 153
>gi|451328694|gb|AGF37241.1| APRR2-like protein, partial [Capsicum annuum]
Length = 505
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GL+VL++D+D + ++ L + Y V T + AL + + F V + +V
Sbjct: 14 FPKGLKVLLLDEDSSSAAEMKSRLEKMDYIVYTFCNESEALSAISSKSEGFHVAIVEVSA 73
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
D DG +L+ + +LP IM S +S +M+ I GA ++L KP+ +++LKNIWQHV
Sbjct: 74 GDNDG--VLQFLESAKNLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKLKNIWQHV 131
Query: 150 VRKRWNENKEHENSGSLE 167
V K +N K + SG LE
Sbjct: 132 VHKAFNARK--DVSGPLE 147
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 51/68 (75%), Gaps = 5/68 (7%)
Query: 216 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 275
S KK +V W+ ELH++FV AV QLGID+A+P RIL++M V GLTR N+ASH LQK
Sbjct: 312 SNKKKVKVDWTPELHKKFVQAVEQLGIDQAIPSRILDVMKVEGLTRHNIASH-----LQK 366
Query: 276 FRLYLKRL 283
+R++ +++
Sbjct: 367 YRMHRRQI 374
>gi|241764781|ref|ZP_04762789.1| CheA signal transduction histidine kinase [Acidovorax delafieldii
2AN]
gi|241365711|gb|EER60407.1| CheA signal transduction histidine kinase [Acidovorax delafieldii
2AN]
Length = 2042
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 16/151 (10%)
Query: 8 VQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
V + G+G G A+ ++ P Q P VLVVDD IT R+ +++L+R Y V +
Sbjct: 1894 VLEAEGAGAGKPAASLLSGPSQVPL---VLVVDDSITVRRVTQRLLQREGYRVALAADGL 1950
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIMMSA----DGRVSA 120
AL+ L+E + VVLSD+ MP MDGF L +I G DLP+IM+++ R A
Sbjct: 1951 QALERLQEERPT--VVLSDIEMPRMDGFDLARNIRADGALRDLPIIMITSRIAEKHREHA 2008
Query: 121 VMRGIRHGACDYLIKPIREEELKNIWQHVVR 151
+ G+ H YL KP +EEL ++ QH R
Sbjct: 2009 MELGVNH----YLGKPYSDEELLSLIQHYAR 2035
>gi|281209703|gb|EFA83871.1| cAMP phosphodiesterase [Polysphondylium pallidum PN500]
Length = 665
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 24 VAVPDQFPA-----GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
+ + DQ PA + +LVVDDDI +L ML++ +NVT + A D L K
Sbjct: 153 LVISDQLPAEYSPSKVHILVVDDDIVQRSLLNNMLKKFNFNVTLVTNGEEAWDTLLNGKV 212
Query: 79 CFDVVLSDVHMPDMDGFKLL----EHIGLEMDLPVIMMSADG-RVSAVMRGIRHGACDYL 133
+D+VL+DV MP + GF LL EHI ++ +PVI+MS I+ G D+L
Sbjct: 213 MYDLVLTDVMMPMVTGFDLLQRINEHIEIK-HIPVILMSGTAVDYKYANDTIKIGGQDFL 271
Query: 134 IKPIREEELKNIWQHVVRKRWNENKEHENSGSL 166
KPI +E LK V+ W + KE E L
Sbjct: 272 TKPIAKELLKKKIDTVLTSIWQKKKEAEYKSFL 304
>gi|423198665|ref|ZP_17185248.1| hypothetical protein HMPREF1171_03280 [Aeromonas hydrophila SSU]
gi|404629855|gb|EKB26580.1| hypothetical protein HMPREF1171_03280 [Aeromonas hydrophila SSU]
Length = 426
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD + L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDASLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMAGMDG 60
Query: 95 FKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV--- 150
L E I + + LPVI+M+A G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQSQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPIDKDELFATIEHALSLT 120
Query: 151 ----RKRWN 155
R+ W
Sbjct: 121 RPKQRQEWQ 129
>gi|392954660|ref|ZP_10320211.1| Fis family two component sigma54 specific transcriptional regulator
[Hydrocarboniphaga effusa AP103]
gi|391857317|gb|EIT67848.1| Fis family two component sigma54 specific transcriptional regulator
[Hydrocarboniphaga effusa AP103]
Length = 457
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LR+LVVDD+ R+LE ML R + + A ++LRE G FD+V+SD+ MP ++
Sbjct: 10 LRILVVDDEANMRRVLEIMLSRRGHKTVSAGDGQAAFELLRE--GGFDLVISDLRMPVVN 67
Query: 94 GFKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 151
G +LL + + +P+IM++A G + + + +R GACDYL++P E L V+R
Sbjct: 68 GIELLAKLREAGIGVPLIMITAQGSIESAVEAMRLGACDYLLRPFDVEALDLAINRVLR 126
>gi|449461539|ref|XP_004148499.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
gi|449530967|ref|XP_004172463.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
Length = 521
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A D+ FP GLRVL++D D + L Y V +C+ A + G F
Sbjct: 5 ADDLQEWKDFPKGLRVLLLDRDSFSATEIRSKLEEMEYVVYSCTDEKEASSAILNTPGNF 64
Query: 81 DVVLSDVHMPDMD-GFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIRE 139
V + +V + D FKLL G DLP+IM S +S +M+ I GA ++L+KP+ E
Sbjct: 65 HVAILEVCARNYDESFKLL---GASKDLPIIMTSDVHCLSTMMKCIALGAVEFLLKPLSE 121
Query: 140 EELKNIWQHVVRKRW-NENKEHENS 163
++L+NIWQHV+ K + N +K E+S
Sbjct: 122 DKLRNIWQHVIHKAYSNSSKPDEDS 146
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 48/69 (69%)
Query: 216 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 275
S KK +V W+ ELH+ FV AV QLGID A+P +ILELM V GLTR N+ASHLQ+ +QK
Sbjct: 274 SKAKKTKVDWTPELHRNFVQAVEQLGIDHAIPSKILELMKVEGLTRHNIASHLQKYRMQK 333
Query: 276 FRLYLKRLN 284
+ + N
Sbjct: 334 KHVMQREEN 342
>gi|427726024|ref|YP_007073301.1| winged helix family two component transcriptional regulator
[Leptolyngbya sp. PCC 7376]
gi|427357744|gb|AFY40467.1| two component transcriptional regulator, winged helix family
[Leptolyngbya sp. PCC 7376]
Length = 244
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL-RERKGCFDVVLSDVHMPDMDG 94
+LVVDD+I RIL L Y++ T + AL++ RER D+V+ DV MP DG
Sbjct: 8 ILVVDDEIAVRRILNTRLSMIGYDIITAADGDEALEVFWRERP---DLVILDVMMPKRDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 154
+ + + I E D P+IM++A G V+ + G+R GA DYL+KP +EL+ ++R+
Sbjct: 65 YYVCQEIRRESDTPIIMLTALGDVADRITGLRFGADDYLVKPFSPKELEARIHCILRRTK 124
Query: 155 NENKEHENSGSL 166
+ E E +G L
Sbjct: 125 KQQNEVEEAGVL 136
>gi|90580619|ref|ZP_01236424.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium angustum S14]
gi|90438277|gb|EAS63463.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium angustum S14]
Length = 1114
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 7/152 (4%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P G +LVVDD+ L+IL LR Y V T ALDI+++++ D++L D+ MP
Sbjct: 702 PEGDLILVVDDEPVNLQILNNFLRLAGYRVKTAESGHQALDIVQQQRP--DLILLDIMMP 759
Query: 91 DMDGFK---LLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+M G++ LL +LP++M+SA G++ ++G GA DYL KP +EEL Q
Sbjct: 760 EMSGYEVCTLLRKQYSIFELPIMMLSALGQIQDRIKGFECGANDYLTKPFNKEELIARIQ 819
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEI 179
++ E+++ +N +E H+R EI
Sbjct: 820 AYLQASKTEHEKQKNQSLQQEI--HRREQVEI 849
>gi|356540587|ref|XP_003538769.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 570
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVL+++ D + + + L Y V+T AL L F V + +V
Sbjct: 14 FPKGLRVLLLEGDSSSAAEIREQLEAMDYKVSTFYDENEALSALSSSPKGFHVAIVEVST 73
Query: 90 P-DMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
+ GFK LE+ DLP IM S D ++ +M+ I GA ++L KP+ E++LKNIWQH
Sbjct: 74 SCSLGGFKFLENAK---DLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQH 130
Query: 149 VVRKRWN 155
VV K +N
Sbjct: 131 VVHKAFN 137
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 275
KK +V W+ ELH++FV AV QLGID+A+P RILE+M V GLTR NVASHLQ+ + K
Sbjct: 312 KKVKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRIHK 368
>gi|117619500|ref|YP_858484.1| transcriptional regulatory protein ZraR [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117560907|gb|ABK37855.1| transcriptional regulatory protein ZraR [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 426
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD + L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDASLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMAGMDG 60
Query: 95 FKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
L E I + + LPVI+M+A G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQSQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPIDKDELFATIEHAL 117
>gi|159475341|ref|XP_001695777.1| hypothetical protein CHLREDRAFT_174408 [Chlamydomonas reinhardtii]
gi|158275337|gb|EDP01114.1| predicted protein [Chlamydomonas reinhardtii]
Length = 2212
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL--RERKGCFDVVLSDVH 88
P+ LR+LVVD + Q+LR C Y VT A L L E FD+VL +
Sbjct: 1500 PSKLRILVVDSKAVSRQTTTQLLRECAYQVTAVKTAREGLQKLIEAEHGANFDLVLKEHE 1559
Query: 89 MPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
P + +LL+ + L PV++ S+ VM + GA DYLIKP+R+ EL++I
Sbjct: 1560 PPSANACRLLKRMAKTEGLTRTPVVVTSSQDERETVMSCLSLGAIDYLIKPLRQNELRHI 1619
Query: 146 WQHVVRKRWNENKEHENSGSLE-ETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 204
W V R ++ +G H R SS N + + K+ +E
Sbjct: 1620 WTRVWWWRKSQGSGPHGAGPPPIAAAHGTRHYGAFRGPSSANRQYDQATSSDSKQTKCQE 1679
Query: 205 EDD 207
E++
Sbjct: 1680 EEE 1682
>gi|423257314|ref|ZP_17238237.1| hypothetical protein HMPREF1055_00514 [Bacteroides fragilis
CL07T00C01]
gi|423265716|ref|ZP_17244719.1| hypothetical protein HMPREF1056_02406 [Bacteroides fragilis
CL07T12C05]
gi|387778790|gb|EIK40885.1| hypothetical protein HMPREF1055_00514 [Bacteroides fragilis
CL07T00C01]
gi|392703374|gb|EIY96518.1| hypothetical protein HMPREF1056_02406 [Bacteroides fragilis
CL07T12C05]
Length = 436
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+V+D+IT +I++ L R Y V T A +LR K FD++LSDV +P DG
Sbjct: 4 RILIVEDNITLSQIVKDWLEREGYAVATAIDEPFARKLLR--KESFDLILSDVRLPQGDG 61
Query: 95 FKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 151
LLE I E MD+P ++M+ V+ ++ I+ GA DYL KP+ E+L + + +++
Sbjct: 62 ISLLEWINKEKMDIPFVIMTEYASVTDAVKAIKMGAKDYLAKPVFHEQLVEMVKELLK 119
>gi|325108669|ref|YP_004269737.1| Fis family transcriptionel regulator [Planctomyces brasiliensis DSM
5305]
gi|324968937|gb|ADY59715.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Planctomyces brasiliensis DSM 5305]
Length = 462
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDD L + LR+ Y T + A+D +RE F+VV+ DVH+PD DGF
Sbjct: 8 LLVVDDDKFILEAMADYLRKLGYRTETAATCGEAMDRMREFP--FEVVICDVHLPDQDGF 65
Query: 96 KLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV--RK 152
+LLE E + VIM++ G + + + IR GA DYL KP+ ++EL Q + RK
Sbjct: 66 QLLEWASKEQPETSVIMLTGYGTIESAVEAIRIGAFDYLTKPVIDDELNLSIQRALGQRK 125
Query: 153 RWNENK 158
ENK
Sbjct: 126 IVEENK 131
>gi|410632594|ref|ZP_11343249.1| transcriptional regulatory protein zraR [Glaciecola arctica
BSs20135]
gi|410147831|dbj|GAC20116.1| transcriptional regulatory protein zraR [Glaciecola arctica
BSs20135]
Length = 448
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VL+VDDD + LR++ L+ YNV + S AL ++ + FDVVLSD+ MP +DG
Sbjct: 11 VLLVDDDESLLRLMAIRLKGEGYNVQSASGGKEALKLINTQN--FDVVLSDLRMPGLDGL 68
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
L E I GL D+PVI+M+A G + + + G +L KPI +EL+++ + V
Sbjct: 69 SLFEEIMGLRKDVPVILMTAHGTIQDAVEATQRGVFGFLTKPIDHDELRSLMKKAV 124
>gi|67921096|ref|ZP_00514615.1| Response regulator receiver:Transcriptional regulatory protein,
C-terminal [Crocosphaera watsonii WH 8501]
gi|416381162|ref|ZP_11684168.1| two-component response regulator [Crocosphaera watsonii WH 0003]
gi|67857213|gb|EAM52453.1| Response regulator receiver:Transcriptional regulatory protein,
C-terminal [Crocosphaera watsonii WH 8501]
gi|357265562|gb|EHJ14311.1| two-component response regulator [Crocosphaera watsonii WH 0003]
Length = 243
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALDI E D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDIFHE--AIPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|209527854|ref|ZP_03276344.1| two component transcriptional regulator, winged helix family
[Arthrospira maxima CS-328]
gi|376006010|ref|ZP_09783358.1| Two component transcriptional regulator, winged helix family
[Arthrospira sp. PCC 8005]
gi|423064997|ref|ZP_17053787.1| two component transcriptional regulator winged helix family
[Arthrospira platensis C1]
gi|209491711|gb|EDZ92076.1| two component transcriptional regulator, winged helix family
[Arthrospira maxima CS-328]
gi|375325627|emb|CCE19111.1| Two component transcriptional regulator, winged helix family
[Arthrospira sp. PCC 8005]
gi|406714240|gb|EKD09408.1| two component transcriptional regulator winged helix family
[Arthrospira platensis C1]
Length = 243
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+LVVDD+ + RILE L Y+V T + AL+I R+ + D+V+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEIFRQTEP--DLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|422978789|ref|ZP_16977772.1| transcriptional regulatory protein zraR [Escherichia coli TA124]
gi|371592409|gb|EHN81315.1| transcriptional regulatory protein zraR [Escherichia coli TA124]
Length = 441
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+++RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALELVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|172038915|ref|YP_001805416.1| two-component response regulator [Cyanothece sp. ATCC 51142]
gi|354552794|ref|ZP_08972102.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. ATCC 51472]
gi|171700369|gb|ACB53350.1| two-component response regulator [Cyanothece sp. ATCC 51142]
gi|353556116|gb|EHC25504.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. ATCC 51472]
Length = 243
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALDI E D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDIFHE--AVPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|126658619|ref|ZP_01729765.1| two-component response regulator [Cyanothece sp. CCY0110]
gi|126620056|gb|EAZ90779.1| two-component response regulator [Cyanothece sp. CCY0110]
Length = 243
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALDI E D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDIFHE--AIPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|224138036|ref|XP_002326502.1| pseudo response regulator [Populus trichocarpa]
gi|222833824|gb|EEE72301.1| pseudo response regulator [Populus trichocarpa]
Length = 448
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 23 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
D++ FP GLRVL++D+D ++ L Y V T AL + G F V
Sbjct: 7 DLSAWKDFPKGLRVLLLDEDSMSAAEIKSKLEAMDYIVYTFCNETEALSAISNEPGSFHV 66
Query: 83 VLSDVHMPDMD-GFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEE 141
+ +V M + FK LE DLP IM S+ ++ +M+ I GA ++L KP+ E++
Sbjct: 67 AIVEVSMSNSSRSFKFLE---TSKDLPTIMTSSIDCLNTMMKCIALGAVEFLRKPLSEDK 123
Query: 142 LKNIWQHVVRKRWN 155
L+NIWQHVV K +N
Sbjct: 124 LRNIWQHVVHKAFN 137
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 50/65 (76%), Gaps = 4/65 (6%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK +V W+ ELH++FV AV +LG+D+A+P RILE+M V GLTR NVASHLQ QK+R+
Sbjct: 294 KKMKVDWTPELHRKFVQAVEKLGVDQAIPSRILEVMKVEGLTRHNVASHLQ----QKYRM 349
Query: 279 YLKRL 283
+ + +
Sbjct: 350 HRRHI 354
>gi|220906550|ref|YP_002481861.1| winged helix family two component transcriptional regulator
[Cyanothece sp. PCC 7425]
gi|219863161|gb|ACL43500.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. PCC 7425]
Length = 243
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L YNV T + AL+ RE D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYNVVTAADGEEALETFREE--VPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|297539092|ref|YP_003674861.1| Fis family two component sigma54 specific transcriptional regulator
[Methylotenera versatilis 301]
gi|297258439|gb|ADI30284.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylotenera versatilis 301]
Length = 456
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L VDD+ R+LE LR+ Y AL ILR D+V+SD+HMP MDG
Sbjct: 6 RILAVDDEPHMRRLLEISLRQAGYQPVVAENGKEALTILR--NDNIDLVVSDLHMPVMDG 63
Query: 95 FKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK 143
KLLE + E +D PVI+++A G +S+ ++ ++ GA DY+++P E L+
Sbjct: 64 LKLLEALRAENIDTPVIIVTAQGEISSAVQAMKLGASDYILRPFDLETLE 113
>gi|309792010|ref|ZP_07686488.1| metal dependent phosphohydrolase [Oscillochloris trichoides DG-6]
gi|308226004|gb|EFO79754.1| metal dependent phosphohydrolase [Oscillochloris trichoides DG6]
Length = 511
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 81/135 (60%), Gaps = 8/135 (5%)
Query: 27 PDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
P Q P R+LVV+DD T +R Q L + Y+VTT AVA+++L+ + FD+VL+D
Sbjct: 10 PTQPP---RILVVEDD-TTIRTFCQRLLQMTYDVTTAENGAVAVNLLQSQ--SFDLVLTD 63
Query: 87 VHMPDMDGFKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL-KN 144
+ MP MDG +LL+HI ++ V+M++A V + ++ GA DYL KPI E+L +
Sbjct: 64 MQMPLMDGMQLLQHIRQNHPEIDVVMLTAFATVETARQALKMGALDYLSKPIEAEQLERT 123
Query: 145 IWQHVVRKRWNENKE 159
+ + +R + KE
Sbjct: 124 VRTSLELRRIRQEKE 138
>gi|146428|gb|AAA24004.1| hydG protein [Escherichia coli]
Length = 437
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
L+ I L +PV++M+A V + ++ GA DYLIKP+ + L+ W+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATWK 118
>gi|434387698|ref|YP_007098309.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Chamaesiphon minutus PCC 6605]
gi|428018688|gb|AFY94782.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Chamaesiphon minutus PCC 6605]
Length = 242
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDD+ + RILE L Y+V T + AL+ RE C D+V+ DV MP +DG+
Sbjct: 8 ILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRE--TCPDLVVLDVMMPKLDGY 65
Query: 96 KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 66 GVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|121609961|ref|YP_997768.1| CheA signal transduction histidine kinase [Verminephrobacter eiseniae
EF01-2]
gi|121554601|gb|ABM58750.1| CheA signal transduction histidine kinases [Verminephrobacter
eiseniae EF01-2]
Length = 1983
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 13/149 (8%)
Query: 9 QSSGGSGYGSSRAAD-VAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
++ G +G G+ A +A P Q P VLVVDD IT R+ +++L+R Y V +
Sbjct: 1835 ETHGTAGTGNKVAPPRLAGPSQVPL---VLVVDDSITVRRVTQRLLQREGYRVALAADGL 1891
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADGRVSAVMR- 123
AL+ L+E + VVLSD+ MP MDGF L +I G DLP+IM+++ R++ R
Sbjct: 1892 QALERLQEERPT--VVLSDIEMPRMDGFDLARNIRADGALRDLPIIMITS--RIAEKHRE 1947
Query: 124 -GIRHGACDYLIKPIREEELKNIWQHVVR 151
I G YL KP +EEL ++ QH R
Sbjct: 1948 HAIELGVNHYLGKPYSDEELLDLIQHYAR 1976
>gi|118638618|gb|ABL09465.1| pseudo-response regulator [Triticum aestivum]
gi|379025584|dbj|BAL63569.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025586|dbj|BAL63570.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025588|dbj|BAL63571.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025590|dbj|BAL63572.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025592|dbj|BAL63573.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025594|dbj|BAL63574.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025596|dbj|BAL63575.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025598|dbj|BAL63576.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025600|dbj|BAL63577.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025602|dbj|BAL63578.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025604|dbj|BAL63579.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025606|dbj|BAL63580.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025608|dbj|BAL63581.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025610|dbj|BAL63582.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025612|dbj|BAL63583.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025614|dbj|BAL63584.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025616|dbj|BAL63585.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025618|dbj|BAL63586.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025620|dbj|BAL63587.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025632|dbj|BAL63593.1| pseudo-response regulator [Triticum durum]
gi|379025634|dbj|BAL63594.1| pseudo-response regulator [Triticum durum]
gi|379025636|dbj|BAL63595.1| pseudo-response regulator [Triticum durum]
gi|379025640|dbj|BAL63597.1| pseudo-response regulator [Triticum durum]
gi|456359214|dbj|BAM93436.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359216|dbj|BAM93437.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 266
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|386393158|ref|ZP_10077939.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
gi|385734036|gb|EIG54234.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
Length = 453
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L VDDD L +LE L Y+V T A AL++L +R +V+SD+ MP MDG
Sbjct: 11 ILAVDDDPHILEVLEVRLVSAGYDVVTAGDGAEALEVLAKRP--VKLVISDIRMPGMDGM 68
Query: 96 KLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
+LLE + + LP+I ++A G + + I+HGA DYL KP +EL
Sbjct: 69 RLLEEMERRGIRLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQEL 116
>gi|357632197|ref|ZP_09130075.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio sp. FW1012B]
gi|357580751|gb|EHJ46084.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio sp. FW1012B]
Length = 453
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L VDDD L +LE L Y+V T A AL++L +R +V+SD+ MP MDG
Sbjct: 11 ILAVDDDPHILEVLEVRLVSAGYDVVTAGDGAEALEVLAKRP--VKLVISDIRMPGMDGM 68
Query: 96 KLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
+LLE + + LP+I ++A G + + I+HGA DYL KP +EL
Sbjct: 69 RLLEEMERRGIRLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQEL 116
>gi|86158253|ref|YP_465038.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774764|gb|ABC81601.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 357
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P R+L+VDDD ++ +LR Y TT + A ALD RK + +V+SDV MP
Sbjct: 6 PEATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALD--EARKTDYPLVISDVRMP 63
Query: 91 DMDGFKLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL-KNIWQH 148
DGF LLE + D VIM++A G A + +R+GA DYL+KP + EL + I +
Sbjct: 64 ARDGFWLLEQMREASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERA 123
Query: 149 VVRKRWN----------ENKEHENSGSLEETDH 171
+ R+R EN+ E + L T H
Sbjct: 124 LGRRRLELARGRYRRSLENRVKEKTAELSRTLH 156
>gi|254000327|ref|YP_003052390.1| Fis family two component sigma54 specific transcriptional regulator
[Methylovorus glucosetrophus SIP3-4]
gi|253987006|gb|ACT51863.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylovorus glucosetrophus SIP3-4]
Length = 457
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L +DD+ R+LE LR+ Y ALDILRE G D+V+SD+HMP MDG
Sbjct: 6 RILALDDEPNMRRLLEISLRQAGYQPVVAENGREALDILRE--GGADLVVSDLHMPVMDG 63
Query: 95 FKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK 143
+LL+ + E + +PVI+++A G +S + ++ GA DY+++P E L+
Sbjct: 64 LQLLQAMQKEGLQVPVIIVTAQGEISTAVAAMKLGASDYILRPFDLETLE 113
>gi|313202285|ref|YP_004040943.1| Fis family two component sigma54 specific transcriptional regulator
[Methylovorus sp. MP688]
gi|312441601|gb|ADQ85707.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylovorus sp. MP688]
Length = 457
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L +DD+ R+LE LR+ Y ALDILRE G D+V+SD+HMP MDG
Sbjct: 6 RILALDDEPNMRRLLEISLRQAGYQPVVAENGREALDILRE--GGADLVVSDLHMPVMDG 63
Query: 95 FKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK 143
+LL+ + E + +PVI+++A G +S + ++ GA DY+++P E L+
Sbjct: 64 LQLLQAMQKEGLQVPVIIVTAQGEISTAVAAMKLGASDYILRPFDLETLE 113
>gi|153004853|ref|YP_001379178.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028426|gb|ABS26194.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 357
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD + ++ +L Y VT S A ALD R F +V+SDV MP DG
Sbjct: 10 RILIVDDDTSVRDVIAVLLGEEGYAVTAVSSAEAALDAARLTD--FSLVISDVRMPGKDG 67
Query: 95 FKLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
F LLE + L D VIM++A G A + +R+GA DYL+KP + +L + + +R
Sbjct: 68 FWLLERVRELHPDTAVIMLTAFGDTEAAVECLRNGAADYLLKPPKVTDLIRAIERALGRR 127
Query: 154 WNENKEHENSGSLE 167
E H SLE
Sbjct: 128 RLELARHRYRRSLE 141
>gi|449513573|ref|XP_004164360.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR2-like [Cucumis sativus]
Length = 559
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK +V W+ ELH++FV AV QLG+++A+P RILELM V GLTR NVASHLQ QK+R+
Sbjct: 313 KKLKVDWTPELHRKFVQAVEQLGVNQAIPSRILELMKVEGLTRHNVASHLQ----QKYRM 368
Query: 279 YLKRLNGVSQQGGITNS 295
+ + + + G ++S
Sbjct: 369 HKRHILPKEEDGSWSHS 385
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVL++D D + ++ L Y V T AL + + F V + +V
Sbjct: 14 FPKGLRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAIVEVTT 73
Query: 90 PDMDG-FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
+ +G FK LE DLP IM+S +S +M+ I GA ++L KP+ +++L+NIWQH
Sbjct: 74 SNHEGNFKFLE---AAKDLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDDKLRNIWQH 130
Query: 149 VVRKRWN 155
VV K +N
Sbjct: 131 VVHKAFN 137
>gi|449464910|ref|XP_004150172.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
Length = 560
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK +V W+ ELH++FV AV QLG+++A+P RILELM V GLTR NVASHLQ QK+R+
Sbjct: 313 KKLKVDWTPELHRKFVQAVEQLGVNQAIPSRILELMKVEGLTRHNVASHLQ----QKYRM 368
Query: 279 YLKRLNGVSQQGGITNS 295
+ + + + G ++S
Sbjct: 369 HKRHILPKEEDGSWSHS 385
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVL++D D + ++ L Y V T AL + + F V + +V
Sbjct: 14 FPKGLRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAIVEVTT 73
Query: 90 PDMDG-FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
+ +G FK LE DLP IM+S +S +M+ I GA ++L KP+ +++L+NIWQH
Sbjct: 74 SNHEGNFKFLE---AAKDLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDDKLRNIWQH 130
Query: 149 VVRKRWN 155
VV K +N
Sbjct: 131 VVHKAFN 137
>gi|197122377|ref|YP_002134328.1| Fis family transcriptional regulator [Anaeromyxobacter sp. K]
gi|220917159|ref|YP_002492463.1| two component sigma-54 specific Fis family transcriptional
regulator [Anaeromyxobacter dehalogenans 2CP-1]
gi|196172226|gb|ACG73199.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter sp. K]
gi|219955013|gb|ACL65397.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter dehalogenans 2CP-1]
Length = 473
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VL+VDD++ R+L ML+R Y VTT + AL +L + VV++D+ MP + G
Sbjct: 4 VLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVLH--RTPVHVVVTDLVMPRVGGM 61
Query: 96 KLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 151
+LL + + D+PVI+++A G V + + ++ GA DY+ KP +EELK + R
Sbjct: 62 ELLRRVSQDFPDVPVILITAHGSVDSAVAALKAGAFDYITKPFEQEELKKVIAKAAR 118
>gi|428209322|ref|YP_007093675.1| winged helix family two component transcriptional regulator
[Chroococcidiopsis thermalis PCC 7203]
gi|428011243|gb|AFY89806.1| two component transcriptional regulator, winged helix family
[Chroococcidiopsis thermalis PCC 7203]
Length = 242
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALD R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTFR--KADPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|427735900|ref|YP_007055444.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Rivularia sp. PCC 7116]
gi|427370941|gb|AFY54897.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Rivularia sp. PCC 7116]
Length = 242
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T ALD R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTFR--KAIPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|197122437|ref|YP_002134388.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|220917204|ref|YP_002492508.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196172286|gb|ACG73259.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|219955058|gb|ACL65442.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 357
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P R+L+VDDD ++ +LR Y TT + A ALD RK + +V+SDV MP
Sbjct: 6 PEATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALD--EARKTDYPLVISDVRMP 63
Query: 91 DMDGFKLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL-KNIWQH 148
DGF LLE + D VIM++A G A + +R+GA DYL+KP + EL + I +
Sbjct: 64 ARDGFWLLEQMREASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERA 123
Query: 149 VVRKRWN----------ENKEHENSGSLEETDH 171
+ R+R EN+ E + L T H
Sbjct: 124 LGRRRLELARGRYRRSLENRVKEKTAELSRTLH 156
>gi|421499169|ref|ZP_15946226.1| two-component system response regulator [Aeromonas media WS]
gi|407181832|gb|EKE55832.1| two-component system response regulator [Aeromonas media WS]
Length = 426
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD + L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDASLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMGGMDG 60
Query: 95 FKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
L E I + + +PVI+M+A G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQSQWLGMPVIIMTAHGTIPDAIQATRSGVFSFLTKPIDKDELLVTIEHAL 117
>gi|381187060|ref|ZP_09894625.1| transcriptional regulatory protein zraR [Flavobacterium frigoris
PS1]
gi|379650670|gb|EIA09240.1| transcriptional regulatory protein zraR [Flavobacterium frigoris
PS1]
Length = 442
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++L+++DDI+ ++LE+ L + Y VTT AA A + L+ FD+VL+D+ +PD DG
Sbjct: 3 KILLIEDDISFCKLLEKFLIKNAYTVTTSFSAAEARNALKAE--IFDLVLTDLRLPDEDG 60
Query: 95 FKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
L+ I + PVI+M+ V+ ++ I++GA DY+ KPI +E+
Sbjct: 61 ISLMAEIKVAFPQTPVILMTGYADVNTAVKAIKNGASDYISKPINPDEV 109
>gi|333907190|ref|YP_004480776.1| two component, sigma54 specific, Fis family transcriptional
regulator [Marinomonas posidonica IVIA-Po-181]
gi|333477196|gb|AEF53857.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Marinomonas posidonica IVIA-Po-181]
Length = 449
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 10/123 (8%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYN---VTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
+++L+V+DD LE L Y V + +A +AL + G FD+V+SDV++P
Sbjct: 4 VKLLIVEDDKGLAEALEDTLMLASYQCKMVYSAEEAVIAL-----KHGQFDMVVSDVNLP 58
Query: 91 DMDGFKLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN-IWQH 148
MDG+ LL H+ +LP+++M+A G ++ + +R GA DYL+KP +EEEL N I ++
Sbjct: 59 GMDGYGLLHHVVDAYPELPIMLMTAYGDIAHAVEAMRDGAVDYLLKPFQEEELLNAIAKY 118
Query: 149 VVR 151
V+
Sbjct: 119 TVK 121
>gi|86606063|ref|YP_474826.1| DNA-binding response regulator [Synechococcus sp. JA-3-3Ab]
gi|86554605|gb|ABC99563.1| DNA-binding response regulator [Synechococcus sp. JA-3-3Ab]
Length = 243
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+LVVDD+ + RILE L Y+V T + AL++ R++ D+V+ DV MP +DG
Sbjct: 8 RILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEVFRKQDP--DLVVLDVMMPKLDG 65
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 66 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 123
>gi|419193836|gb|AFX68729.1| APRR2-like protein [Solanum lycopersicum]
Length = 560
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 5/68 (7%)
Query: 216 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 275
S KK +V W+ ELH++FV AV QLGID+A+P RIL+LM V GLTR NVASH LQK
Sbjct: 312 SNRKKIKVDWTPELHKKFVQAVEQLGIDQAIPSRILDLMKVEGLTRHNVASH-----LQK 366
Query: 276 FRLYLKRL 283
+R++ K++
Sbjct: 367 YRMHRKQI 374
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GL+VL++D+D ++ L + Y V + + AL + + F V + +V
Sbjct: 14 FPKGLKVLLLDEDSNSAAEMKSRLEKMDYIVYSFCNESEALTAISSKSEGFHVAIVEVSA 73
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
+ DG +L + DLP IM S +S +M+ I GA ++L KP+ +++LKNIWQHV
Sbjct: 74 GNSDG--VLRFLESAKDLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKLKNIWQHV 131
Query: 150 VRKRWNENKE 159
V K +N K+
Sbjct: 132 VHKAFNTRKD 141
>gi|414591290|tpg|DAA41861.1| TPA: hypothetical protein ZEAMMB73_323779 [Zea mays]
Length = 657
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 60 VTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADG 116
V + A L ++ D+VL++V MP + G LL I + ++PVIMMS+
Sbjct: 37 VISAKNGQQAWAYLEDKGNNIDLVLTEVFMPGVSGISLLSRIMRHNIFKNIPVIMMSSSD 96
Query: 117 RVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
+S V + + GA D+L+KPIR+ ELKN+WQHV R+R
Sbjct: 97 DMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRQR 133
>gi|334706228|ref|ZP_08522094.1| two-component system response regulator [Aeromonas caviae Ae398]
Length = 426
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD + L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDASLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMGGMDG 60
Query: 95 FKLLEHIGLE-MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
L E I + + +PVI+M+A G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQSQWLGMPVIIMTAHGTIPDAIQATRSGVFSFLTKPIDKDELLVTIEHAL 117
>gi|424513385|emb|CCO66007.1| predicted protein [Bathycoccus prasinos]
Length = 738
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 47/55 (85%)
Query: 222 RVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 276
R+VW+ ELH++F++AVN LG+D AVPK I+++MNV GLTRENVASHLQ+ L++
Sbjct: 508 RLVWNDELHRRFMNAVNHLGLDAAVPKTIMQMMNVEGLTRENVASHLQKYRLKQM 562
>gi|425856112|gb|AFX97564.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 5/78 (6%)
Query: 80 FDVVLSDVHMPDMDGFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIK 135
D+VL++V +P M GF LL I +E D +PVIMMS++ VS V + + GA D+L+K
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTI-MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVK 59
Query: 136 PIREEELKNIWQHVVRKR 153
PIR+ EL+N+WQHV RK+
Sbjct: 60 PIRKNELRNLWQHVWRKQ 77
>gi|434391939|ref|YP_007126886.1| two component transcriptional regulator, winged helix family
[Gloeocapsa sp. PCC 7428]
gi|428263780|gb|AFZ29726.1| two component transcriptional regulator, winged helix family
[Gloeocapsa sp. PCC 7428]
Length = 242
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALD R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTFR--KAQPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|381149245|gb|AFF60405.1| golden 2-like 1 transcription factor [Capsicum annuum]
Length = 447
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 15/128 (11%)
Query: 166 LEETDHHKRGSDEIEYA-SSVNEGTE--GTFKAQ------RKRISAKEEDDGELES-DDP 215
+E D +R + ++ +S+N+G E T K++ ++ I+ KE D G+ S ++
Sbjct: 98 VERKDETERAASDVGSGLTSLNQGEEIVSTQKSEESTLQVKQNITPKESDKGKKSSKNNL 157
Query: 216 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 275
+K +V W+ ELH++FV AV QLG+DKAVP RILE+M + LTR N+ASH LQK
Sbjct: 158 PVKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASH-----LQK 212
Query: 276 FRLYLKRL 283
+R + K L
Sbjct: 213 YRSHRKHL 220
>gi|414879737|tpg|DAA56868.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 304
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK R+ W+ ELH +FV+AV LG AVPK I+ LMNV GLTRENVASH LQK+R+
Sbjct: 196 KKARIAWTPELHNRFVAAVEHLGDKGAVPKAIVRLMNVEGLTRENVASH-----LQKYRI 250
Query: 279 YLK 281
YLK
Sbjct: 251 YLK 253
>gi|297796729|ref|XP_002866249.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312084|gb|EFH42508.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 445
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 8/94 (8%)
Query: 194 KAQRKRISAKEEDDGELESDD--PSTTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRI 250
K Q + S ++E+DG+ + S T+ R VW+VELHQ+FV+AV QL G+DKA P++I
Sbjct: 18 KKQNEDDSDRKEEDGKGNEHNGMESCTRMKRTVWTVELHQKFVNAVQQLGGVDKASPEQI 77
Query: 251 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 284
LMNV GL NVASH LQK+RLYLK+++
Sbjct: 78 HALMNVEGLPVINVASH-----LQKYRLYLKKID 106
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Query: 222 RVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQE 270
RVVWS ELHQ+F+ A++QLG DKA+PK+IL +MNV GLTR NVA+HLQ+
Sbjct: 342 RVVWSHELHQKFLHAIDQLGGNDKAIPKKILAVMNVEGLTRLNVATHLQK 391
>gi|425856110|gb|AFX97563.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 5/78 (6%)
Query: 80 FDVVLSDVHMPDMDGFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIK 135
D+VL++V +P M GF LL I +E D +PVIMMS++ VS V + + GA D+L+K
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTI-MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVK 59
Query: 136 PIREEELKNIWQHVVRKR 153
PIR+ EL+N+WQHV RK+
Sbjct: 60 PIRKNELRNLWQHVWRKQ 77
>gi|170077111|ref|YP_001733749.1| two-component response regulator (ycf27) [Synechococcus sp. PCC
7002]
gi|169884780|gb|ACA98493.1| two-component response regulator (ycf27) [Synechococcus sp. PCC
7002]
Length = 258
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL-RERKGCFDVVLSDVHMPDMDG 94
+LVVDD+I RIL+ L Y++ T + ALDI RE D+V+ DV MP DG
Sbjct: 16 ILVVDDEIAVRRILQTRLSMIGYDIITAADGDEALDIFWREDP---DLVILDVMMPKRDG 72
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 154
+ + + I E P+IM++A G V+ + G+R GA DYLIKP +EL+ Q ++R+
Sbjct: 73 YYVCQEIRRESSTPIIMLTALGDVADRITGLRFGADDYLIKPFSPKELEVRIQCILRRTQ 132
Query: 155 NENKEHENSGSLE 167
E +G L
Sbjct: 133 KTLPPTEEAGILR 145
>gi|414077097|ref|YP_006996415.1| two-component response regulator [Anabaena sp. 90]
gi|413970513|gb|AFW94602.1| two-component response regulator [Anabaena sp. 90]
Length = 242
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T AL+I R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALEIFR--KAEPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|339778519|gb|AEK06141.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGR 117
T+ A +D L D++LS+V +P G K+L++I + DL PVIMMSA
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 118 VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
VS V++ +R GA DYL+KP+R EL N+W H+ R+R
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|152997453|ref|YP_001342288.1| two component sigma-54-specific Fis family transcriptional
regulator [Marinomonas sp. MWYL1]
gi|150838377|gb|ABR72353.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Marinomonas sp. MWYL1]
Length = 448
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 10/129 (7%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYN---VTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
+++L+V+DD LE L Y V + +A VAL + FD+V+SDV++P
Sbjct: 4 VKLLIVEDDKGLAEALEDTLMLASYQCKIVYSSEEAVVAL-----KHSLFDMVISDVNLP 58
Query: 91 DMDGFKLLEH-IGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN-IWQH 148
MDG+ LL H I +LP+++M+A G ++ + +R GA DYL+KP +EEEL N I ++
Sbjct: 59 GMDGYGLLHHVIDTYPELPMMLMTAYGDIAHAVEAMRDGAVDYLLKPFQEEELLNAIAKY 118
Query: 149 VVRKRWNEN 157
V++ + N
Sbjct: 119 TVKEAPSAN 127
>gi|339778505|gb|AEK06134.1| timing of cab 1 [Populus balsamifera]
gi|339778507|gb|AEK06135.1| timing of cab 1 [Populus balsamifera]
gi|339778511|gb|AEK06137.1| timing of cab 1 [Populus balsamifera]
gi|339778513|gb|AEK06138.1| timing of cab 1 [Populus balsamifera]
gi|339778515|gb|AEK06139.1| timing of cab 1 [Populus balsamifera]
gi|339778523|gb|AEK06143.1| timing of cab 1 [Populus balsamifera]
gi|339778527|gb|AEK06145.1| timing of cab 1 [Populus balsamifera]
gi|339778531|gb|AEK06147.1| timing of cab 1 [Populus balsamifera]
gi|339778535|gb|AEK06149.1| timing of cab 1 [Populus balsamifera]
gi|339778539|gb|AEK06151.1| timing of cab 1 [Populus balsamifera]
gi|339778541|gb|AEK06152.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGR 117
T+ A +D L D++LS+V +P G K+L++I + DL PVIMMSA
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 118 VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
VS V++ +R GA DYL+KP+R EL N+W H+ R+R
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|339778503|gb|AEK06133.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGR 117
T+ A +D L D++LS+V +P G K+L++I + DL PVIMMSA
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 118 VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
VS V++ +R GA DYL+KP+R EL N+W H+ R+R
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|328868868|gb|EGG17246.1| cAMP-specific phosphodiesterase [Dictyostelium fasciculatum]
Length = 842
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P+ + +LVVDDDIT ++L+ +L + YNVT S A A ++L FD+VL+DV MP
Sbjct: 142 PSSIHILVVDDDITQRKVLQNLLSKVFYNVTLVSSAEEAWNMLIYGTTKFDLVLTDVMMP 201
Query: 91 DMDGFKLLEHIGLE---MDLPVIMMSADG-RVSAVMRGIRHGACDYLIKPIREEELK 143
+ GF LL+ I ++PVI+MS I+ G D++ KPI +E LK
Sbjct: 202 QVTGFDLLQRINEHPEIKNIPVILMSGTALDCKYANDTIKIGGQDFVTKPIAKELLK 258
>gi|339778525|gb|AEK06144.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGR 117
T+ A +D L D++LS+V +P G K+L++I + DL PVIMMSA
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 118 VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
VS V++ +R GA DYL+KP+R EL N+W H+ R+R
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|339778501|gb|AEK06132.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGR 117
T+ A +D L D++LS+V +P G K+L++I + DL PVIMMSA
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 118 VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
VS V++ +R GA DYL+KP+R EL N+W H+ R+R
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|339778537|gb|AEK06150.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGR 117
T+ A +D L D++LS+V +P G K+L++I + DL PVIMMSA
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 118 VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
VS V++ +R GA DYL+KP+R EL N+W H+ R+R
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|318041885|ref|ZP_07973841.1| two-component response regulator [Synechococcus sp. CB0101]
Length = 254
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 76/122 (62%), Gaps = 2/122 (1%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P GL++LV DD+ RILE L + V S A AL++ R + D+V+ DV MP
Sbjct: 10 PEGLKILVADDEANIRRILETRLTMQGHEVLMASNGAEALELFRGSEP--DLVVLDVMMP 67
Query: 91 DMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
++DGF ++E I + ++P+I+++A G V+ + G++ GA DY++KP +EL+ + V+
Sbjct: 68 ELDGFAVVERIRAQSEVPIILLTALGDVADRITGLQLGADDYMVKPFSPKELEARIRCVM 127
Query: 151 RK 152
R+
Sbjct: 128 RR 129
>gi|440682389|ref|YP_007157184.1| two component transcriptional regulator, winged helix family
[Anabaena cylindrica PCC 7122]
gi|428679508|gb|AFZ58274.1| two component transcriptional regulator, winged helix family
[Anabaena cylindrica PCC 7122]
Length = 242
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T AL+I R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALEIFR--KAEPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|339778509|gb|AEK06136.1| timing of cab 1 [Populus balsamifera]
gi|339778517|gb|AEK06140.1| timing of cab 1 [Populus balsamifera]
gi|339778521|gb|AEK06142.1| timing of cab 1 [Populus balsamifera]
gi|339778529|gb|AEK06146.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGR 117
T+ A +D L D++LS+V +P G K+L++I + DL PVIMMSA
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 118 VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
VS V++ +R GA DYL+KP+R EL N+W H+ R+R
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|339778533|gb|AEK06148.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGR 117
T+ A +D L D++LS+V +P G K+L++I + DL PVIMMSA
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 118 VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
VS V++ +R GA DYL+KP+R EL N+W H+ R+R
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|427729957|ref|YP_007076194.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Nostoc sp. PCC 7524]
gi|427365876|gb|AFY48597.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Nostoc sp. PCC 7524]
Length = 242
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T ALD R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTFR--KADPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|325972397|ref|YP_004248588.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
gi|324027635|gb|ADY14394.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
Length = 341
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 8/173 (4%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
++ DDD +IL+ MLR+ Y VT C + L +LR+ + D++L D+ MP GF
Sbjct: 5 IVTTDDDPAIRKILQIMLRKEGYMVTACEEGNGLLQLLRQSEESIDLILLDIKMPGFSGF 64
Query: 96 KLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 154
+LLE I +P++M++A + M+ +R GA DYL KP+ E L V++
Sbjct: 65 ELLEMIRASYPQIPIVMITAFNDLDTGMKAMRMGASDYLAKPVHREALFA----TVKRVL 120
Query: 155 NENKEHENSGSLEETDHHKRGSDEIEYA---SSVNEGTEGTFKAQRKRISAKE 204
+E ++ + + H+R E E +S+ + T T +A + I K+
Sbjct: 121 DEAEKEQQLLDKQMQSQHQRALLETELKEVLTSLQDTTIATLEAFSETIEQKD 173
>gi|415831830|ref|ZP_11517381.1| transcriptional regulatory protein zraR [Escherichia coli OK1357]
gi|323182104|gb|EFZ67514.1| transcriptional regulatory protein zraR [Escherichia coli OK1357]
Length = 441
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|115441007|ref|NP_001044783.1| Os01g0844900 [Oryza sativa Japonica Group]
gi|113534314|dbj|BAF06697.1| Os01g0844900 [Oryza sativa Japonica Group]
gi|218189362|gb|EEC71789.1| hypothetical protein OsI_04411 [Oryza sativa Indica Group]
gi|222619526|gb|EEE55658.1| hypothetical protein OsJ_04055 [Oryza sativa Japonica Group]
Length = 219
Score = 80.5 bits (197), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 47/64 (73%), Gaps = 5/64 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK R+VW+ ELH +FV AV LG AVPK I+ LMNV GLTRENVASH LQK+RL
Sbjct: 105 KKARMVWTPELHHRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASH-----LQKYRL 159
Query: 279 YLKR 282
YLKR
Sbjct: 160 YLKR 163
>gi|432478954|ref|ZP_19720922.1| transcriptional regulatory protein zraR [Escherichia coli KTE210]
gi|431012149|gb|ELD26214.1| transcriptional regulatory protein zraR [Escherichia coli KTE210]
Length = 441
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|386626918|ref|YP_006146646.1| transcriptional regulatory protein ZraR [Escherichia coli O7:K1
str. CE10]
gi|349740654|gb|AEQ15360.1| transcriptional regulatory protein ZraR [Escherichia coli O7:K1
str. CE10]
Length = 441
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|218697712|ref|YP_002405379.1| transcriptional regulatory protein ZraR [Escherichia coli 55989]
gi|332282918|ref|ZP_08395331.1| transcriptional regulatory protein ZraR [Shigella sp. D9]
gi|407467010|ref|YP_006786548.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2009EL-2071]
gi|407484266|ref|YP_006781416.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2011C-3493]
gi|410484812|ref|YP_006772358.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2009EL-2050]
gi|417161108|ref|ZP_11997441.1| transcriptional regulator ZraR [Escherichia coli 99.0741]
gi|417599455|ref|ZP_12250075.1| transcriptional regulatory protein zraR [Escherichia coli 3030-1]
gi|417835440|ref|ZP_12481879.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 01-09591]
gi|417868436|ref|ZP_12513463.1| hydG [Escherichia coli O104:H4 str. C227-11]
gi|419394324|ref|ZP_13935116.1| response regulator [Escherichia coli DEC15A]
gi|419399459|ref|ZP_13940214.1| response regulator [Escherichia coli DEC15B]
gi|419404700|ref|ZP_13945412.1| response regulator [Escherichia coli DEC15C]
gi|419409862|ref|ZP_13950542.1| response regulator [Escherichia coli DEC15D]
gi|419415426|ref|ZP_13956053.1| response regulator [Escherichia coli DEC15E]
gi|422990268|ref|ZP_16981040.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. C227-11]
gi|422997165|ref|ZP_16987927.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. C236-11]
gi|423002261|ref|ZP_16993012.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 09-7901]
gi|423005917|ref|ZP_16996662.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 04-8351]
gi|423012475|ref|ZP_17003206.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-3677]
gi|423021709|ref|ZP_17012414.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4404]
gi|423026865|ref|ZP_17017559.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4522]
gi|423032693|ref|ZP_17023379.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4623]
gi|423035568|ref|ZP_17026244.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423040689|ref|ZP_17031357.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423047374|ref|ZP_17038032.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423055912|ref|ZP_17044718.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423057917|ref|ZP_17046715.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C5]
gi|425425035|ref|ZP_18806174.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
0.1288]
gi|429721750|ref|ZP_19256662.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9450]
gi|429773828|ref|ZP_19305838.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02030]
gi|429779012|ref|ZP_19310974.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02033-1]
gi|429782847|ref|ZP_19314768.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02092]
gi|429788240|ref|ZP_19320123.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02093]
gi|429794679|ref|ZP_19326516.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02281]
gi|429800639|ref|ZP_19332424.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02318]
gi|429804251|ref|ZP_19336004.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02913]
gi|429809076|ref|ZP_19340787.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-03439]
gi|429814841|ref|ZP_19346507.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-04080]
gi|429819801|ref|ZP_19351427.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-03943]
gi|429906119|ref|ZP_19372092.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9990]
gi|429910253|ref|ZP_19376212.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9941]
gi|429916151|ref|ZP_19382095.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4984]
gi|429921200|ref|ZP_19387124.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-5604]
gi|429927007|ref|ZP_19392916.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4986]
gi|429930938|ref|ZP_19396836.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4987]
gi|429937480|ref|ZP_19403364.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4988]
gi|429943157|ref|ZP_19409028.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-5603]
gi|429945839|ref|ZP_19411697.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-6006]
gi|429953402|ref|ZP_19419244.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec12-0465]
gi|429956746|ref|ZP_19422576.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec12-0466]
gi|432762908|ref|ZP_19997367.1| transcriptional regulatory protein zraR [Escherichia coli KTE48]
gi|218354444|emb|CAV01260.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia coli 55989]
gi|332105270|gb|EGJ08616.1| transcriptional regulatory protein ZraR [Shigella sp. D9]
gi|340732020|gb|EGR61159.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 01-09591]
gi|341921725|gb|EGT71321.1| hydG [Escherichia coli O104:H4 str. C227-11]
gi|345347514|gb|EGW79820.1| transcriptional regulatory protein zraR [Escherichia coli 3030-1]
gi|354857018|gb|EHF17475.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. C236-11]
gi|354860811|gb|EHF21252.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 04-8351]
gi|354861335|gb|EHF21775.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. C227-11]
gi|354870041|gb|EHF30447.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 09-7901]
gi|354875807|gb|EHF36172.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-3677]
gi|354884530|gb|EHF44842.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4404]
gi|354888308|gb|EHF48568.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4522]
gi|354891861|gb|EHF52080.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4623]
gi|354903893|gb|EHF63992.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354907415|gb|EHF67478.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354909190|gb|EHF69224.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354911920|gb|EHF71923.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C4]
gi|354919801|gb|EHF79741.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C5]
gi|378232523|gb|EHX92622.1| response regulator [Escherichia coli DEC15A]
gi|378239411|gb|EHX99401.1| response regulator [Escherichia coli DEC15B]
gi|378242184|gb|EHY02147.1| response regulator [Escherichia coli DEC15C]
gi|378250492|gb|EHY10397.1| response regulator [Escherichia coli DEC15D]
gi|378254899|gb|EHY14760.1| response regulator [Escherichia coli DEC15E]
gi|386174247|gb|EIH46247.1| transcriptional regulator ZraR [Escherichia coli 99.0741]
gi|406779974|gb|AFS59398.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2009EL-2050]
gi|407056563|gb|AFS76614.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2011C-3493]
gi|407063045|gb|AFS84092.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2009EL-2071]
gi|408340242|gb|EKJ54748.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
0.1288]
gi|429354376|gb|EKY91076.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02030]
gi|429355281|gb|EKY91973.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02033-1]
gi|429356168|gb|EKY92849.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02092]
gi|429369891|gb|EKZ06462.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02093]
gi|429370588|gb|EKZ07153.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02281]
gi|429373195|gb|EKZ09743.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02318]
gi|429385992|gb|EKZ22443.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02913]
gi|429387937|gb|EKZ24366.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-03439]
gi|429389847|gb|EKZ26265.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-03943]
gi|429399120|gb|EKZ35443.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-04080]
gi|429401326|gb|EKZ37632.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9990]
gi|429404119|gb|EKZ40398.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9450]
gi|429412505|gb|EKZ48700.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4984]
gi|429414954|gb|EKZ51127.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4986]
gi|429422504|gb|EKZ58621.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4987]
gi|429426577|gb|EKZ62665.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4988]
gi|429431547|gb|EKZ67595.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-5603]
gi|429437853|gb|EKZ73850.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-5604]
gi|429441940|gb|EKZ77904.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec12-0465]
gi|429447337|gb|EKZ83260.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-6006]
gi|429453977|gb|EKZ89844.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec12-0466]
gi|429458351|gb|EKZ94178.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9941]
gi|431315006|gb|ELG02936.1| transcriptional regulatory protein zraR [Escherichia coli KTE48]
Length = 441
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|218702639|ref|YP_002410268.1| transcriptional regulatory protein ZraR [Escherichia coli IAI39]
gi|218372625|emb|CAR20500.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia coli IAI39]
Length = 441
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|301118478|ref|XP_002906967.1| protein kinase, putative [Phytophthora infestans T30-4]
gi|262108316|gb|EEY66368.1| protein kinase, putative [Phytophthora infestans T30-4]
Length = 897
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 16/174 (9%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P+ + VLVV+DD +L+ C Y V ALD+L FD+VL DV +P
Sbjct: 3 PSEVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDLLVTNHAKFDLVLCDVMLP 62
Query: 91 DMDGFKLLE----HIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
M G +LL+ H +P++M S++ + V + GA DYLIKPI+ K +
Sbjct: 63 VMTGIELLDEIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQVNTAKTLV 122
Query: 147 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 200
+HV W + LE T + D IE ++ +GT GT R+++
Sbjct: 123 RHV----WLSRR-------LERTSNKSMWQD-IEVIRTIGKGTHGTVVLARRKV 164
>gi|170021993|ref|YP_001726947.1| transcriptional regulatory protein ZraR [Escherichia coli ATCC
8739]
gi|194439783|ref|ZP_03071850.1| response regulator ZraR [Escherichia coli 101-1]
gi|251787262|ref|YP_003001566.1| ZraR transcriptional activator [Escherichia coli BL21(DE3)]
gi|253775366|ref|YP_003038197.1| transcriptional regulatory protein ZraR [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163946|ref|YP_003047054.1| transcriptional regulatory protein ZraR [Escherichia coli B str.
REL606]
gi|254290696|ref|YP_003056444.1| fused response regulator/sigma54 interaction protein [Escherichia
coli BL21(DE3)]
gi|300928824|ref|ZP_07144332.1| response regulator receiver domain protein [Escherichia coli MS
187-1]
gi|386616826|ref|YP_006136492.1| transcriptional regulatory protein ZraR [Escherichia coli UMNK88]
gi|386707252|ref|YP_006171099.1| Response regulator containing CheY-like receiver, AAA-type ATPase,
and DNA-binding domains [Escherichia coli P12b]
gi|387614684|ref|YP_006117800.1| two-component system response regulator [Escherichia coli ETEC
H10407]
gi|417610775|ref|ZP_12261261.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_DG131-3]
gi|422789418|ref|ZP_16842147.1| sigma-54 interaction domain-containing protein [Escherichia coli
H489]
gi|422794385|ref|ZP_16847072.1| sigma-54 interaction domain-containing protein [Escherichia coli
TA007]
gi|425291224|ref|ZP_18682027.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
3006]
gi|432367509|ref|ZP_19610619.1| transcriptional regulatory protein zraR [Escherichia coli KTE10]
gi|432487796|ref|ZP_19729700.1| transcriptional regulatory protein zraR [Escherichia coli KTE212]
gi|432528857|ref|ZP_19765925.1| transcriptional regulatory protein zraR [Escherichia coli KTE233]
gi|432673093|ref|ZP_19908607.1| transcriptional regulatory protein zraR [Escherichia coli KTE119]
gi|433175939|ref|ZP_20360435.1| transcriptional regulatory protein zraR [Escherichia coli KTE232]
gi|442599346|ref|ZP_21017065.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|169756921|gb|ACA79620.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli ATCC 8739]
gi|194421280|gb|EDX37300.1| response regulator ZraR [Escherichia coli 101-1]
gi|242379535|emb|CAQ34351.1| ZraR transcriptional activator [Escherichia coli BL21(DE3)]
gi|253326410|gb|ACT31012.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975847|gb|ACT41518.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli B str. REL606]
gi|253980003|gb|ACT45673.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli BL21(DE3)]
gi|300463205|gb|EFK26698.1| response regulator receiver domain protein [Escherichia coli MS
187-1]
gi|309704420|emb|CBJ03769.1| two-component system response regulator [Escherichia coli ETEC
H10407]
gi|323958931|gb|EGB54606.1| sigma-54 interaction domain-containing protein [Escherichia coli
H489]
gi|323969078|gb|EGB64386.1| sigma-54 interaction domain-containing protein [Escherichia coli
TA007]
gi|332345995|gb|AEE59329.1| transcriptional regulatory protein ZraR [Escherichia coli UMNK88]
gi|345352649|gb|EGW84894.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_DG131-3]
gi|383105420|gb|AFG42929.1| Response regulator containing CheY-like receiver, AAA-type ATPase,
and DNA-binding domains [Escherichia coli P12b]
gi|408208536|gb|EKI33181.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
3006]
gi|430890548|gb|ELC13181.1| transcriptional regulatory protein zraR [Escherichia coli KTE10]
gi|431012886|gb|ELD26640.1| transcriptional regulatory protein zraR [Escherichia coli KTE212]
gi|431059472|gb|ELD68829.1| transcriptional regulatory protein zraR [Escherichia coli KTE233]
gi|431206969|gb|ELF05287.1| transcriptional regulatory protein zraR [Escherichia coli KTE119]
gi|431686543|gb|ELJ52108.1| transcriptional regulatory protein zraR [Escherichia coli KTE232]
gi|441651847|emb|CCQ02562.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
Length = 441
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|399018558|ref|ZP_10720733.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Herbaspirillum sp. CF444]
gi|398101060|gb|EJL91287.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Herbaspirillum sp. CF444]
Length = 145
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+F + LR++VVDD IT L+ L +L + ++ T CS AL +LRE G FD++L+D+
Sbjct: 3 EFVSSLRIMVVDDQITHLKALCDILGQHDFDATGCSTGEAALALLRE--GSFDLLLTDLV 60
Query: 89 MPDMDGFKLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
MP + G L+E L+ + I+M+ +G V ++ ++ GA DY+IKP + L + +
Sbjct: 61 MPGIGGLALIEAARALDPCIACIIMTGEGTVDTAVKAMKIGALDYIIKPFKAATLLPVLK 120
Query: 148 HVVRKR 153
+ R
Sbjct: 121 RAIEFR 126
>gi|194434761|ref|ZP_03067012.1| response regulator ZraR [Shigella dysenteriae 1012]
gi|416285190|ref|ZP_11647661.1| Response regulator of zinc sigma-54-dependent two-component system
[Shigella boydii ATCC 9905]
gi|417674802|ref|ZP_12324234.1| transcriptional regulatory protein zraR [Shigella dysenteriae
155-74]
gi|420349990|ref|ZP_14851352.1| transcriptional regulatory protein zraR [Shigella boydii 965-58]
gi|194416985|gb|EDX33103.1| response regulator ZraR [Shigella dysenteriae 1012]
gi|320179532|gb|EFW54483.1| Response regulator of zinc sigma-54-dependent two-component system
[Shigella boydii ATCC 9905]
gi|332085401|gb|EGI90571.1| transcriptional regulatory protein zraR [Shigella dysenteriae
155-74]
gi|391264035|gb|EIQ23032.1| transcriptional regulatory protein zraR [Shigella boydii 965-58]
Length = 441
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|417141603|ref|ZP_11984455.1| transcriptional regulator ZraR [Escherichia coli 97.0259]
gi|417310611|ref|ZP_12097422.1| Transcriptional regulatory protein zraR [Escherichia coli PCN033]
gi|338767828|gb|EGP22637.1| Transcriptional regulatory protein zraR [Escherichia coli PCN033]
gi|386155506|gb|EIH11857.1| transcriptional regulator ZraR [Escherichia coli 97.0259]
Length = 441
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|365102038|ref|ZP_09332576.1| transcriptional regulatory protein zraR [Citrobacter freundii
4_7_47CFAA]
gi|363646537|gb|EHL85779.1| transcriptional regulatory protein zraR [Citrobacter freundii
4_7_47CFAA]
Length = 441
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR Y V AL+++RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYEVALAYSGRAALELVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
L+ I L +PV++M+A V + ++ GA DYLIKP+ + L+ + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAVEALKTGALDYLIKPLDFDRLQETLEKAL 121
>gi|188492788|ref|ZP_03000058.1| response regulator ZraR [Escherichia coli 53638]
gi|188487987|gb|EDU63090.1| response regulator ZraR [Escherichia coli 53638]
Length = 441
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|260870715|ref|YP_003237117.1| fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O111:H- str.
11128]
gi|415822094|ref|ZP_11510845.1| transcriptional regulatory protein zraR [Escherichia coli OK1180]
gi|417202070|ref|ZP_12018320.1| transcriptional regulator ZraR [Escherichia coli 4.0522]
gi|417212591|ref|ZP_12022208.1| transcriptional regulator ZraR [Escherichia coli JB1-95]
gi|417594480|ref|ZP_12245166.1| transcriptional regulatory protein zraR [Escherichia coli 2534-86]
gi|419199811|ref|ZP_13743094.1| transcriptional regulatory protein zraR [Escherichia coli DEC8A]
gi|419205364|ref|ZP_13748528.1| response regulator [Escherichia coli DEC8B]
gi|419219007|ref|ZP_13761977.1| response regulator [Escherichia coli DEC8E]
gi|419229655|ref|ZP_13772484.1| response regulator [Escherichia coli DEC9A]
gi|419235210|ref|ZP_13777970.1| response regulator [Escherichia coli DEC9B]
gi|419240568|ref|ZP_13783267.1| response regulator [Escherichia coli DEC9C]
gi|419246164|ref|ZP_13788790.1| response regulator [Escherichia coli DEC9D]
gi|419251988|ref|ZP_13794550.1| response regulator [Escherichia coli DEC9E]
gi|419286975|ref|ZP_13829130.1| response regulator [Escherichia coli DEC10F]
gi|419891238|ref|ZP_14411357.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9570]
gi|419897079|ref|ZP_14416674.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9574]
gi|420090897|ref|ZP_14602658.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9602]
gi|424768680|ref|ZP_18195943.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CFSAN001632]
gi|257767071|dbj|BAI38566.1| fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O111:H- str.
11128]
gi|323177560|gb|EFZ63145.1| transcriptional regulatory protein zraR [Escherichia coli OK1180]
gi|345331587|gb|EGW64047.1| transcriptional regulatory protein zraR [Escherichia coli 2534-86]
gi|378042040|gb|EHW04494.1| transcriptional regulatory protein zraR [Escherichia coli DEC8A]
gi|378045023|gb|EHW07430.1| response regulator [Escherichia coli DEC8B]
gi|378067544|gb|EHW29663.1| response regulator [Escherichia coli DEC9A]
gi|378072520|gb|EHW34578.1| response regulator [Escherichia coli DEC9B]
gi|378075270|gb|EHW37297.1| response regulator [Escherichia coli DEC8E]
gi|378078311|gb|EHW40300.1| response regulator [Escherichia coli DEC9C]
gi|378085927|gb|EHW47809.1| response regulator [Escherichia coli DEC9D]
gi|378088523|gb|EHW50375.1| response regulator [Escherichia coli DEC9E]
gi|378124089|gb|EHW85502.1| response regulator [Escherichia coli DEC10F]
gi|386186957|gb|EIH75780.1| transcriptional regulator ZraR [Escherichia coli 4.0522]
gi|386194831|gb|EIH89074.1| transcriptional regulator ZraR [Escherichia coli JB1-95]
gi|388350728|gb|EIL16062.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9570]
gi|388355897|gb|EIL20712.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9574]
gi|394384974|gb|EJE62523.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9602]
gi|421945849|gb|EKU03034.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CFSAN001632]
Length = 441
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|417807695|ref|ZP_12454621.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. LB226692]
gi|340737591|gb|EGR71846.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. LB226692]
Length = 408
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|17231314|ref|NP_487862.1| two-component response regulator [Nostoc sp. PCC 7120]
gi|17132956|dbj|BAB75521.1| two-component response regulator [Nostoc sp. PCC 7120]
Length = 242
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T ALD R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTFR--KSDPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|224368210|ref|YP_002602373.1| sigma-54 dependent transcriptional regulator [Desulfobacterium
autotrophicum HRM2]
gi|223690926|gb|ACN14209.1| sigma-54 dependent transcriptional regulator [Desulfobacterium
autotrophicum HRM2]
Length = 455
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++L+VDD+ IL ++L+ Y T S A +ALDIL + C D+VLSDV+MP MDG
Sbjct: 3 KILIVDDEKNYPTILGEVLKEEGYTPVTASSALMALDILND--DCIDLVLSDVNMPGMDG 60
Query: 95 FKLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
+LLE I + + PVI+M+A G V + + GA Y++KP + L
Sbjct: 61 IELLEKIKEITPNTPVIVMTAYGSVEKAVDAMHKGAYTYILKPFENDTL 109
>gi|420097350|ref|ZP_14608652.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9634]
gi|394384625|gb|EJE62182.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9634]
Length = 441
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|340508704|gb|EGR34354.1| hypothetical protein IMG5_014920 [Ichthyophthirius multifiliis]
Length = 545
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Query: 24 VAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVV 83
+A D+ + VLV +DD L +L C Y VT +A D L + DVV
Sbjct: 1 MADDDRENRNIHVLVAEDDNFQRLALIDVLTLCNYQVTDVENGRLARDELLKEDSNIDVV 60
Query: 84 LSDVHMPDMDGFKLL---EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREE 140
L D+ MP+MDG++LL ++ ++PVIMMSAD V + HGA DYL+KPIR +
Sbjct: 61 LLDLWMPEMDGWELLCLMQNYEKLRNIPVIMMSADNEQEKVALCLAHGAKDYLVKPIRIQ 120
Query: 141 ELKNIWQHVV 150
+K I HV+
Sbjct: 121 MVKGIANHVI 130
>gi|348665892|gb|EGZ05720.1| hypothetical protein PHYSODRAFT_551172 [Phytophthora sojae]
Length = 897
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 16/174 (9%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P+ + VLVV+DD +L+ C Y V ALD+L FD+VL DV +P
Sbjct: 3 PSEVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDVLVANHAKFDLVLCDVMLP 62
Query: 91 DMDGFKLLE----HIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
M G +LL+ H +P++M S++ + V + GA DYLIKPI+ K +
Sbjct: 63 VMTGIELLDQIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQVNTAKTLV 122
Query: 147 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 200
+HV W + LE T + D IE ++ +GT GT R+++
Sbjct: 123 RHV----WLSRR-------LERTSNKSMWQD-IEVIRTIGKGTHGTVVLARRKL 164
>gi|297519348|ref|ZP_06937734.1| transcriptional regulatory protein ZraR [Escherichia coli OP50]
Length = 239
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK 143
L+ I L +PV++M+A V + ++ GA DYLIKP+ + L+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>gi|312281707|dbj|BAJ33719.1| unnamed protein product [Thellungiella halophila]
Length = 392
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%), Gaps = 5/65 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK +V W+ +LH++FV AV QLG+DKAVP RILE+MNV LTR NVASH LQK+R
Sbjct: 143 KKTKVDWTPDLHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASH-----LQKYRS 197
Query: 279 YLKRL 283
+ K L
Sbjct: 198 HRKHL 202
>gi|159477193|ref|XP_001696695.1| hypothetical protein CHLREDRAFT_130971 [Chlamydomonas reinhardtii]
gi|158275024|gb|EDP00803.1| predicted protein [Chlamydomonas reinhardtii]
Length = 69
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/68 (57%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 208 GELESDDPST--TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 265
GE +DD +T K+PR+VW+ +LH++F SAV +LG DKAVPK I++ MN+ GLTRENVA
Sbjct: 2 GEEYADDGTTRAVKRPRLVWTPQLHRKFESAVIKLGEDKAVPKTIMQEMNIDGLTRENVA 61
Query: 266 SHLQEINL 273
SHLQ+ +
Sbjct: 62 SHLQKYRM 69
>gi|118351764|ref|XP_001009157.1| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|89290924|gb|EAR88912.1| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 818
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
+ VLV +DD L +L C Y VT +A D L ++ D+VL D++MP+M
Sbjct: 2 NIHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDELLKQDSNIDIVLLDLYMPEM 61
Query: 93 DGFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 148
DGF+LL EH L+ +PVIMMS+D V I GA DY+ KP+R + +K I ++
Sbjct: 62 DGFELLSLMQEHENLQ-KIPVIMMSSDKEEEKVATCIAKGAKDYIFKPLRVQNVKAIAKY 120
Query: 149 VVRK 152
V K
Sbjct: 121 VQYK 124
>gi|260858114|ref|YP_003232005.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. 11368]
gi|415785483|ref|ZP_11492983.1| transcriptional regulatory protein zraR [Escherichia coli EPECa14]
gi|417296921|ref|ZP_12084168.1| transcriptional regulator ZraR [Escherichia coli 900105 (10e)]
gi|419212552|ref|ZP_13755611.1| response regulator [Escherichia coli DEC8C]
gi|419218344|ref|ZP_13761330.1| response regulator [Escherichia coli DEC8D]
gi|419258215|ref|ZP_13800693.1| response regulator [Escherichia coli DEC10A]
gi|419258314|ref|ZP_13800789.1| response regulator [Escherichia coli DEC10B]
gi|419264358|ref|ZP_13806754.1| response regulator [Escherichia coli DEC10C]
gi|419274646|ref|ZP_13816935.1| response regulator [Escherichia coli DEC10D]
gi|419877926|ref|ZP_14399429.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9534]
gi|419883864|ref|ZP_14404907.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9545]
gi|419903934|ref|ZP_14422946.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM9942]
gi|419909822|ref|ZP_14428358.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10026]
gi|420103936|ref|ZP_14614727.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9455]
gi|420110729|ref|ZP_14620662.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9553]
gi|420118128|ref|ZP_14627465.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10021]
gi|420123125|ref|ZP_14632023.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10030]
gi|420128695|ref|ZP_14637245.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10224]
gi|420136116|ref|ZP_14644181.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM9952]
gi|424748772|ref|ZP_18176900.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CFSAN001629]
gi|424766577|ref|ZP_18193927.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CFSAN001630]
gi|425382370|ref|ZP_18766340.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1865]
gi|257756763|dbj|BAI28265.1| fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O26:H11 str.
11368]
gi|323155546|gb|EFZ41723.1| transcriptional regulatory protein zraR [Escherichia coli EPECa14]
gi|378047529|gb|EHW09892.1| response regulator [Escherichia coli DEC8C]
gi|378057375|gb|EHW19608.1| response regulator [Escherichia coli DEC8D]
gi|378093222|gb|EHW55039.1| response regulator [Escherichia coli DEC10A]
gi|378113832|gb|EHW75392.1| response regulator [Escherichia coli DEC10D]
gi|378120423|gb|EHW81900.1| response regulator [Escherichia coli DEC10B]
gi|378120662|gb|EHW82132.1| response regulator [Escherichia coli DEC10C]
gi|386260365|gb|EIJ15839.1| transcriptional regulator ZraR [Escherichia coli 900105 (10e)]
gi|388337644|gb|EIL04142.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9534]
gi|388356951|gb|EIL21583.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9545]
gi|388368693|gb|EIL32317.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM9942]
gi|388372441|gb|EIL35865.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10026]
gi|394384916|gb|EJE62467.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10224]
gi|394401182|gb|EJE77027.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10021]
gi|394401723|gb|EJE77502.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9553]
gi|394406026|gb|EJE81109.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9455]
gi|394417578|gb|EJE91302.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10030]
gi|394418916|gb|EJE92558.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM9952]
gi|408292830|gb|EKJ11323.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1865]
gi|421934521|gb|EKT92285.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CFSAN001630]
gi|421943584|gb|EKU00866.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CFSAN001629]
Length = 441
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|291285419|ref|YP_003502237.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. CB9615]
gi|387509454|ref|YP_006161710.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. RM12579]
gi|416779198|ref|ZP_11876288.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. G5101]
gi|416790420|ref|ZP_11881177.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H-
str. 493-89]
gi|416802240|ref|ZP_11886066.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H-
str. H 2687]
gi|416813079|ref|ZP_11891005.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. 3256-97]
gi|416823562|ref|ZP_11895607.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. USDA 5905]
gi|416833824|ref|ZP_11900601.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. LSU-61]
gi|419078215|ref|ZP_13623707.1| response regulator [Escherichia coli DEC3F]
gi|419117583|ref|ZP_13662586.1| response regulator [Escherichia coli DEC5A]
gi|419123817|ref|ZP_13668735.1| response regulator [Escherichia coli DEC5B]
gi|419128812|ref|ZP_13673676.1| response regulator [Escherichia coli DEC5C]
gi|419134144|ref|ZP_13678964.1| response regulator [Escherichia coli DEC5D]
gi|419139428|ref|ZP_13684213.1| transcriptional regulatory protein zraR [Escherichia coli DEC5E]
gi|420283284|ref|ZP_14785511.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW06591]
gi|425146867|ref|ZP_18546840.1| transcriptional regulatory protein zraR [Escherichia coli 10.0869]
gi|425251931|ref|ZP_18644855.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
5905]
gi|425264029|ref|ZP_18656001.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC96038]
gi|425270021|ref|ZP_18661627.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
5412]
gi|445014853|ref|ZP_21330944.1| transcriptional regulatory protein zraR [Escherichia coli PA48]
gi|209751638|gb|ACI74126.1| response regulator HydG [Escherichia coli]
gi|209751644|gb|ACI74129.1| response regulator HydG [Escherichia coli]
gi|290765292|gb|ADD59253.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. CB9615]
gi|320639095|gb|EFX08735.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. G5101]
gi|320644489|gb|EFX13552.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H-
str. 493-89]
gi|320649808|gb|EFX18329.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H-
str. H 2687]
gi|320655141|gb|EFX23097.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320660785|gb|EFX28239.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. USDA 5905]
gi|320665903|gb|EFX32934.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. LSU-61]
gi|374361448|gb|AEZ43155.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. RM12579]
gi|377916446|gb|EHU80529.1| response regulator [Escherichia coli DEC3F]
gi|377956639|gb|EHV20186.1| response regulator [Escherichia coli DEC5A]
gi|377958261|gb|EHV21777.1| response regulator [Escherichia coli DEC5B]
gi|377968519|gb|EHV31911.1| response regulator [Escherichia coli DEC5C]
gi|377970169|gb|EHV33540.1| response regulator [Escherichia coli DEC5D]
gi|377979732|gb|EHV43008.1| transcriptional regulatory protein zraR [Escherichia coli DEC5E]
gi|390778950|gb|EIO46700.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW06591]
gi|408161065|gb|EKH89048.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
5905]
gi|408176761|gb|EKI03596.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC96038]
gi|408179972|gb|EKI06618.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
5412]
gi|408588111|gb|EKK62712.1| transcriptional regulatory protein zraR [Escherichia coli 10.0869]
gi|444619781|gb|ELV93807.1| transcriptional regulatory protein zraR [Escherichia coli PA48]
Length = 441
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|86158331|ref|YP_465116.1| two component sigma54 specific Fis family transcriptional regulator
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85774842|gb|ABC81679.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter dehalogenans 2CP-C]
Length = 473
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VL+VDD++ R+L ML+R Y VTT + AL +L + VV++D+ MP + G
Sbjct: 4 VLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVLH--RTPVHVVVTDLVMPRVGGM 61
Query: 96 KLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 151
+LL + + D+PVI+++A G V + + ++ GA DY+ KP ++ELK + R
Sbjct: 62 ELLRRVSQDFPDVPVILITAHGSVDSAVAALKAGAFDYITKPFEQDELKKVIAKAAR 118
>gi|379025638|dbj|BAL63596.1| pseudo-response regulator [Triticum durum]
Length = 266
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA ++L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|319956809|ref|YP_004168072.1| winged helix family two component transcriptional regulator
[Nitratifractor salsuginis DSM 16511]
gi|319419213|gb|ADV46323.1| two component transcriptional regulator, winged helix family
[Nitratifractor salsuginis DSM 16511]
Length = 223
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +++L+V+DD+ L LR ++V T AL L++ +D++L DV++PD
Sbjct: 5 SKVKILLVEDDVETSEFLSTFLRDSGFDVDTVFSVTDALSHLKQ--NPYDILLLDVNLPD 62
Query: 92 MDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK-NIW 146
G +LL+ I E+ LP I++SA G + + R+GA DY++KPI EEL+ IW
Sbjct: 63 YSGMELLKSIKGELSLPTIILSAYGDTRSKIMAFRYGATDYMVKPIDLEELEARIW 118
>gi|420376193|ref|ZP_14875976.1| transcriptional regulatory protein zraR [Shigella flexneri 1235-66]
gi|391306357|gb|EIQ64114.1| transcriptional regulatory protein zraR [Shigella flexneri 1235-66]
Length = 441
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR Y V AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYEVALAYSGRAALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 154
L+ I L +PV++M+A V + ++ GA DYLIKP+ + L+ + + R
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAIEALKTGALDYLIKPLDFDRLQETLEKALAHRR 125
Query: 155 NENKE 159
E
Sbjct: 126 ETGAE 130
>gi|379025904|dbj|BAL63729.1| pseudo-response regulator [Triticum turanicum]
gi|379025906|dbj|BAL63730.1| pseudo-response regulator [Triticum turanicum]
gi|379025908|dbj|BAL63731.1| pseudo-response regulator [Triticum polonicum]
Length = 665
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQGLPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVI MS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVISMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 150 VRK 152
R+
Sbjct: 155 WRR 157
>gi|354568271|ref|ZP_08987436.1| two component transcriptional regulator, winged helix family
[Fischerella sp. JSC-11]
gi|353540634|gb|EHC10107.1| two component transcriptional regulator, winged helix family
[Fischerella sp. JSC-11]
Length = 242
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T ALD R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTFR--KTDPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|333893877|ref|YP_004467752.1| two-component system response regulator [Alteromonas sp. SN2]
gi|332993895|gb|AEF03950.1| two-component system response regulator [Alteromonas sp. SN2]
Length = 446
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L+VDDD + LR+L L Y VT AL L+ FDVVLSD+ MP +DG
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYQVTAVEDGNAALRKLQ--NDAFDVVLSDLRMPGLDGL 68
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
L E I G+ D+PVI+M+A G +S + + G +L KP+ +EL+ + Q +
Sbjct: 69 SLFEEIMGIRKDIPVILMTAHGTISDAVAATQRGVFGFLPKPVDHDELRTLLQKAL 124
>gi|333378870|ref|ZP_08470597.1| hypothetical protein HMPREF9456_02192 [Dysgonomonas mossii DSM
22836]
gi|332885682|gb|EGK05928.1| hypothetical protein HMPREF9456_02192 [Dysgonomonas mossii DSM
22836]
Length = 377
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 71/110 (64%), Gaps = 5/110 (4%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDD +T + +L+ +L + +NV T + A++I+R K D++L D++MP+MDGF
Sbjct: 10 ILVVDDVMTNVLLLQVLLDKEGFNVVTANDGQAAIEIIR--KDVPDLILLDINMPNMDGF 67
Query: 96 KLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
+++ + L ++PVI ++A V ++++G R G DY+ KP +EEL
Sbjct: 68 EVIREVKKYSLYREIPVIFLTAMNDVDSIVKGFRLGGSDYITKPFNKEEL 117
>gi|254421179|ref|ZP_05034897.1| response regulator receiver domain protein [Synechococcus sp. PCC
7335]
gi|196188668|gb|EDX83632.1| response regulator receiver domain protein [Synechococcus sp. PCC
7335]
Length = 242
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALD R D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTFR--NTIPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|373456903|ref|ZP_09548670.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Caldithrix abyssi DSM 13497]
gi|371718567|gb|EHO40338.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Caldithrix abyssi DSM 13497]
Length = 445
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD L+ L+ +L Y V TC+ +ALD L+ K + + DV MP +DG
Sbjct: 3 RILIVDDDEYFLQSLKNLLVYKKYEVETCANPIMALDYLK--KSTYHLAFLDVKMPGIDG 60
Query: 95 FKLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK 143
+LLE+I G D+ VIM+S +S + I+ GA D++ KP+ E+L+
Sbjct: 61 LELLENIRGFNKDISVIMVSGQSTISIAVEAIKKGAFDFIEKPVDPEKLQ 110
>gi|15804595|ref|NP_290636.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. EDL933]
gi|15834181|ref|NP_312954.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. Sakai]
gi|168752030|ref|ZP_02777052.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4113]
gi|168758599|ref|ZP_02783606.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4401]
gi|168764585|ref|ZP_02789592.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4501]
gi|168771477|ref|ZP_02796484.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4486]
gi|168777382|ref|ZP_02802389.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4196]
gi|168780390|ref|ZP_02805397.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4076]
gi|168790365|ref|ZP_02815372.1| response regulator ZraR [Escherichia coli O157:H7 str. EC869]
gi|168798361|ref|ZP_02823368.1| response regulator ZraR [Escherichia coli O157:H7 str. EC508]
gi|195939630|ref|ZP_03085012.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. EC4024]
gi|208805812|ref|ZP_03248149.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4206]
gi|208812972|ref|ZP_03254301.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4045]
gi|208821649|ref|ZP_03261969.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4042]
gi|209396243|ref|YP_002273521.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. EC4115]
gi|217326117|ref|ZP_03442201.1| response regulator ZraR [Escherichia coli O157:H7 str. TW14588]
gi|254796002|ref|YP_003080839.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. TW14359]
gi|261227284|ref|ZP_05941565.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator, sigma54
[Escherichia coli O157:H7 str. FRIK2000]
gi|261257031|ref|ZP_05949564.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator, sigma54
[Escherichia coli O157:H7 str. FRIK966]
gi|387885226|ref|YP_006315528.1| transcriptional regulatory protein ZraR [Escherichia coli Xuzhou21]
gi|416308228|ref|ZP_11654969.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. 1044]
gi|416324621|ref|ZP_11665327.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. 1125]
gi|419047294|ref|ZP_13594227.1| response regulator [Escherichia coli DEC3A]
gi|419048809|ref|ZP_13595729.1| response regulator [Escherichia coli DEC3B]
gi|419059930|ref|ZP_13606725.1| response regulator [Escherichia coli DEC3C]
gi|419065912|ref|ZP_13612605.1| response regulator [Escherichia coli DEC3D]
gi|419072328|ref|ZP_13617922.1| response regulator [Escherichia coli DEC3E]
gi|419083368|ref|ZP_13628807.1| response regulator [Escherichia coli DEC4A]
gi|419089314|ref|ZP_13634660.1| response regulator [Escherichia coli DEC4B]
gi|419095880|ref|ZP_13641148.1| response regulator [Escherichia coli DEC4C]
gi|419095978|ref|ZP_13641231.1| response regulator [Escherichia coli DEC4D]
gi|419106654|ref|ZP_13651771.1| response regulator [Escherichia coli DEC4E]
gi|419107223|ref|ZP_13652334.1| response regulator [Escherichia coli DEC4F]
gi|420272508|ref|ZP_14774852.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA22]
gi|420278153|ref|ZP_14780427.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA40]
gi|420284047|ref|ZP_14786269.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW10246]
gi|420294391|ref|ZP_14796504.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW11039]
gi|420307072|ref|ZP_14809053.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW10119]
gi|420318092|ref|ZP_14819956.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1734]
gi|421815079|ref|ZP_16250773.1| transcriptional regulatory protein zraR [Escherichia coli 8.0416]
gi|421820856|ref|ZP_16256334.1| transcriptional regulatory protein zraR [Escherichia coli 10.0821]
gi|421826798|ref|ZP_16262147.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK920]
gi|421832833|ref|ZP_16268114.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA7]
gi|423728283|ref|ZP_17702030.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA31]
gi|424080353|ref|ZP_17817287.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA505]
gi|424093162|ref|ZP_17829065.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1996]
gi|424106046|ref|ZP_17840754.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1990]
gi|424112682|ref|ZP_17846888.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
93-001]
gi|424118615|ref|ZP_17852429.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA3]
gi|424124816|ref|ZP_17858092.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA5]
gi|424130979|ref|ZP_17863861.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA9]
gi|424143851|ref|ZP_17875681.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA14]
gi|424150217|ref|ZP_17881572.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA15]
gi|424165320|ref|ZP_17886993.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA24]
gi|424258710|ref|ZP_17892533.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA25]
gi|424336286|ref|ZP_17898471.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA28]
gi|424452555|ref|ZP_17904176.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA32]
gi|424458718|ref|ZP_17909793.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA33]
gi|424465251|ref|ZP_17915543.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA39]
gi|424471482|ref|ZP_17921259.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA41]
gi|424477971|ref|ZP_17927266.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA42]
gi|424483752|ref|ZP_17932712.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW07945]
gi|424489947|ref|ZP_17938462.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09098]
gi|424496662|ref|ZP_17944155.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09195]
gi|424503268|ref|ZP_17950131.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4203]
gi|424509541|ref|ZP_17955886.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4196]
gi|424516945|ref|ZP_17961506.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW14313]
gi|424523072|ref|ZP_17967156.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW14301]
gi|424528945|ref|ZP_17972636.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4421]
gi|424535088|ref|ZP_17978416.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4422]
gi|424541175|ref|ZP_17984099.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4013]
gi|424547321|ref|ZP_17989629.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4402]
gi|424553518|ref|ZP_17995324.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4439]
gi|424559721|ref|ZP_18001094.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4436]
gi|424566044|ref|ZP_18007026.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4437]
gi|424572171|ref|ZP_18012684.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4448]
gi|424578327|ref|ZP_18018339.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1845]
gi|424584152|ref|ZP_18023778.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1863]
gi|425100825|ref|ZP_18503541.1| transcriptional regulatory protein zraR [Escherichia coli 3.4870]
gi|425112902|ref|ZP_18514803.1| transcriptional regulatory protein zraR [Escherichia coli 6.0172]
gi|425128828|ref|ZP_18529978.1| transcriptional regulatory protein zraR [Escherichia coli 8.0586]
gi|425134597|ref|ZP_18535429.1| transcriptional regulatory protein zraR [Escherichia coli 8.2524]
gi|425141190|ref|ZP_18541551.1| transcriptional regulatory protein zraR [Escherichia coli 10.0833]
gi|425152980|ref|ZP_18552574.1| transcriptional regulatory protein zraR [Escherichia coli 88.0221]
gi|425158881|ref|ZP_18558124.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA34]
gi|425165198|ref|ZP_18564065.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA506]
gi|425170948|ref|ZP_18569402.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA507]
gi|425176992|ref|ZP_18575091.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA504]
gi|425183051|ref|ZP_18580728.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1999]
gi|425189354|ref|ZP_18586605.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1997]
gi|425196080|ref|ZP_18592831.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE1487]
gi|425208937|ref|ZP_18604715.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK2001]
gi|425214735|ref|ZP_18610118.1| transcriptional regulatory protein zraR [Escherichia coli PA4]
gi|425220817|ref|ZP_18615760.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA23]
gi|425227467|ref|ZP_18621913.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA49]
gi|425233619|ref|ZP_18627639.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA45]
gi|425239544|ref|ZP_18633244.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TT12B]
gi|425245782|ref|ZP_18639069.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
MA6]
gi|425257773|ref|ZP_18650248.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
CB7326]
gi|425314190|ref|ZP_18703337.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1735]
gi|425320172|ref|ZP_18708929.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1736]
gi|425326312|ref|ZP_18714618.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1737]
gi|425332621|ref|ZP_18720413.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1846]
gi|425338798|ref|ZP_18726117.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1847]
gi|425345091|ref|ZP_18731960.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1848]
gi|425350930|ref|ZP_18737369.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1849]
gi|425357201|ref|ZP_18743243.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1850]
gi|425363153|ref|ZP_18748780.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1856]
gi|425369418|ref|ZP_18754474.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1862]
gi|425375723|ref|ZP_18760342.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1864]
gi|425388610|ref|ZP_18772149.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1866]
gi|425395339|ref|ZP_18778425.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1868]
gi|425401394|ref|ZP_18784080.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1869]
gi|425407490|ref|ZP_18789691.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1870]
gi|425413847|ref|ZP_18795589.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE098]
gi|425420065|ref|ZP_18801317.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK523]
gi|425431461|ref|ZP_18812050.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
0.1304]
gi|428949868|ref|ZP_19022119.1| transcriptional regulatory protein zraR [Escherichia coli 88.1467]
gi|428955939|ref|ZP_19027709.1| transcriptional regulatory protein zraR [Escherichia coli 88.1042]
gi|428961896|ref|ZP_19033154.1| transcriptional regulatory protein zraR [Escherichia coli 89.0511]
gi|428968559|ref|ZP_19039243.1| transcriptional regulatory protein zraR [Escherichia coli 90.0091]
gi|428974294|ref|ZP_19044585.1| transcriptional regulatory protein zraR [Escherichia coli 90.0039]
gi|428980761|ref|ZP_19050545.1| transcriptional regulatory protein zraR [Escherichia coli 90.2281]
gi|428986506|ref|ZP_19055875.1| transcriptional regulatory protein zraR [Escherichia coli 93.0055]
gi|428992655|ref|ZP_19061622.1| transcriptional regulatory protein zraR [Escherichia coli 93.0056]
gi|428998548|ref|ZP_19067119.1| transcriptional regulatory protein zraR [Escherichia coli 94.0618]
gi|429004944|ref|ZP_19072982.1| transcriptional regulatory protein zraR [Escherichia coli 95.0183]
gi|429011022|ref|ZP_19078396.1| transcriptional regulatory protein zraR [Escherichia coli 95.1288]
gi|429017441|ref|ZP_19084297.1| transcriptional regulatory protein zraR [Escherichia coli 95.0943]
gi|429023274|ref|ZP_19089768.1| transcriptional regulatory protein zraR [Escherichia coli 96.0428]
gi|429029364|ref|ZP_19095315.1| transcriptional regulatory protein zraR [Escherichia coli 96.0427]
gi|429035506|ref|ZP_19101008.1| transcriptional regulatory protein zraR [Escherichia coli 96.0939]
gi|429041613|ref|ZP_19106681.1| transcriptional regulatory protein zraR [Escherichia coli 96.0932]
gi|429047422|ref|ZP_19112114.1| transcriptional regulatory protein zraR [Escherichia coli 96.0107]
gi|429052836|ref|ZP_19117388.1| transcriptional regulatory protein zraR [Escherichia coli 97.0003]
gi|429058371|ref|ZP_19122596.1| transcriptional regulatory protein zraR [Escherichia coli 97.1742]
gi|429063877|ref|ZP_19127820.1| transcriptional regulatory protein zraR [Escherichia coli 97.0007]
gi|429070123|ref|ZP_19133537.1| transcriptional regulatory protein zraR [Escherichia coli 99.0672]
gi|429075841|ref|ZP_19139080.1| transcriptional regulatory protein zraR [Escherichia coli 99.0678]
gi|429081090|ref|ZP_19144211.1| transcriptional regulatory protein zraR [Escherichia coli 99.0713]
gi|429829276|ref|ZP_19360250.1| transcriptional regulatory protein zraR [Escherichia coli 96.0109]
gi|429835742|ref|ZP_19365962.1| transcriptional regulatory protein zraR [Escherichia coli 97.0010]
gi|444933387|ref|ZP_21252379.1| transcriptional regulatory protein zraR [Escherichia coli 99.0814]
gi|444938828|ref|ZP_21257546.1| transcriptional regulatory protein zraR [Escherichia coli 99.0815]
gi|444944459|ref|ZP_21262929.1| transcriptional regulatory protein zraR [Escherichia coli 99.0816]
gi|444949203|ref|ZP_21267501.1| transcriptional regulatory protein zraR [Escherichia coli 99.0839]
gi|444955541|ref|ZP_21273592.1| transcriptional regulatory protein zraR [Escherichia coli 99.0848]
gi|444960963|ref|ZP_21278769.1| transcriptional regulatory protein zraR [Escherichia coli 99.1753]
gi|444966169|ref|ZP_21283713.1| transcriptional regulatory protein zraR [Escherichia coli 99.1775]
gi|444977490|ref|ZP_21294550.1| transcriptional regulatory protein zraR [Escherichia coli 99.1805]
gi|444988243|ref|ZP_21305005.1| transcriptional regulatory protein zraR [Escherichia coli PA11]
gi|444993620|ref|ZP_21310247.1| transcriptional regulatory protein zraR [Escherichia coli PA19]
gi|444998804|ref|ZP_21315290.1| transcriptional regulatory protein zraR [Escherichia coli PA13]
gi|445004312|ref|ZP_21320688.1| transcriptional regulatory protein zraR [Escherichia coli PA2]
gi|445009742|ref|ZP_21325955.1| transcriptional regulatory protein zraR [Escherichia coli PA47]
gi|445020738|ref|ZP_21336687.1| transcriptional regulatory protein zraR [Escherichia coli PA8]
gi|445026168|ref|ZP_21341977.1| transcriptional regulatory protein zraR [Escherichia coli 7.1982]
gi|445031582|ref|ZP_21347233.1| transcriptional regulatory protein zraR [Escherichia coli 99.1781]
gi|445037022|ref|ZP_21352534.1| transcriptional regulatory protein zraR [Escherichia coli 99.1762]
gi|445042719|ref|ZP_21358076.1| transcriptional regulatory protein zraR [Escherichia coli PA35]
gi|445053463|ref|ZP_21368462.1| transcriptional regulatory protein zraR [Escherichia coli 95.0083]
gi|445061444|ref|ZP_21373947.1| transcriptional regulatory protein zraR [Escherichia coli 99.0670]
gi|452970668|ref|ZP_21968895.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
O157:H7 str. EC4009]
gi|20140981|sp|Q8X613.1|ZRAR_ECO57 RecName: Full=Transcriptional regulatory protein ZraR
gi|12518936|gb|AAG59201.1|AE005632_2 response regulator of hydrogenase 3 activity (sensor HydH)
[Escherichia coli O157:H7 str. EDL933]
gi|13364403|dbj|BAB38350.1| response regulator HydG [Escherichia coli O157:H7 str. Sakai]
gi|187767371|gb|EDU31215.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4196]
gi|188014032|gb|EDU52154.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4113]
gi|189001862|gb|EDU70848.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4076]
gi|189354602|gb|EDU73021.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4401]
gi|189359769|gb|EDU78188.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4486]
gi|189365464|gb|EDU83880.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4501]
gi|189370154|gb|EDU88570.1| response regulator ZraR [Escherichia coli O157:H7 str. EC869]
gi|189379122|gb|EDU97538.1| response regulator ZraR [Escherichia coli O157:H7 str. EC508]
gi|208725613|gb|EDZ75214.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4206]
gi|208734249|gb|EDZ82936.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4045]
gi|208741772|gb|EDZ89454.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4042]
gi|209157643|gb|ACI35076.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4115]
gi|209751640|gb|ACI74127.1| response regulator HydG [Escherichia coli]
gi|209751642|gb|ACI74128.1| response regulator HydG [Escherichia coli]
gi|209751646|gb|ACI74130.1| response regulator HydG [Escherichia coli]
gi|217322338|gb|EEC30762.1| response regulator ZraR [Escherichia coli O157:H7 str. TW14588]
gi|254595402|gb|ACT74763.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator, sigma54
interaction protein [Escherichia coli O157:H7 str.
TW14359]
gi|326347144|gb|EGD70874.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. 1125]
gi|326347605|gb|EGD71327.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. 1044]
gi|377890718|gb|EHU55174.1| response regulator [Escherichia coli DEC3A]
gi|377901374|gb|EHU65694.1| response regulator [Escherichia coli DEC3C]
gi|377902853|gb|EHU67155.1| response regulator [Escherichia coli DEC3B]
gi|377902883|gb|EHU67184.1| response regulator [Escherichia coli DEC3D]
gi|377906133|gb|EHU70388.1| response regulator [Escherichia coli DEC3E]
gi|377922726|gb|EHU86707.1| response regulator [Escherichia coli DEC4A]
gi|377925870|gb|EHU89807.1| response regulator [Escherichia coli DEC4B]
gi|377935376|gb|EHU99175.1| response regulator [Escherichia coli DEC4C]
gi|377943360|gb|EHV07080.1| response regulator [Escherichia coli DEC4E]
gi|377952166|gb|EHV15764.1| response regulator [Escherichia coli DEC4D]
gi|377967790|gb|EHV31193.1| response regulator [Escherichia coli DEC4F]
gi|386798684|gb|AFJ31718.1| transcriptional regulatory protein ZraR [Escherichia coli Xuzhou21]
gi|390636804|gb|EIN16375.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1996]
gi|390636971|gb|EIN16531.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA505]
gi|390656392|gb|EIN34272.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
93-001]
gi|390658862|gb|EIN36645.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1990]
gi|390673694|gb|EIN49921.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA3]
gi|390677021|gb|EIN53097.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA5]
gi|390680473|gb|EIN56317.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA9]
gi|390695718|gb|EIN70230.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA14]
gi|390696943|gb|EIN71379.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA15]
gi|390711000|gb|EIN83993.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA22]
gi|390716518|gb|EIN89316.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA24]
gi|390717712|gb|EIN90489.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA25]
gi|390723807|gb|EIN96387.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA28]
gi|390736363|gb|EIO07700.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA31]
gi|390737118|gb|EIO08428.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA32]
gi|390740876|gb|EIO11991.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA33]
gi|390755298|gb|EIO24844.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA40]
gi|390757480|gb|EIO26959.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA39]
gi|390761536|gb|EIO30824.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA41]
gi|390764426|gb|EIO33636.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA42]
gi|390785207|gb|EIO52761.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW07945]
gi|390794374|gb|EIO61671.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW11039]
gi|390796667|gb|EIO63935.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW10246]
gi|390799619|gb|EIO66758.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09098]
gi|390813304|gb|EIO79941.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW10119]
gi|390821063|gb|EIO87278.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09195]
gi|390822154|gb|EIO88292.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4203]
gi|390827190|gb|EIO92968.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4196]
gi|390840367|gb|EIP04408.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW14313]
gi|390842375|gb|EIP06226.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW14301]
gi|390847399|gb|EIP10942.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4421]
gi|390857879|gb|EIP20303.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4422]
gi|390862280|gb|EIP24480.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4013]
gi|390866210|gb|EIP28185.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4402]
gi|390874611|gb|EIP35714.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4439]
gi|390879968|gb|EIP40687.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4436]
gi|390889862|gb|EIP49565.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4437]
gi|390891016|gb|EIP50659.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4448]
gi|390905479|gb|EIP64422.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1734]
gi|390914710|gb|EIP73245.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1845]
gi|390915476|gb|EIP73990.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1863]
gi|408062685|gb|EKG97187.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA7]
gi|408063234|gb|EKG97730.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK920]
gi|408063628|gb|EKG98118.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA34]
gi|408074839|gb|EKH09092.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA506]
gi|408079994|gb|EKH14095.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA507]
gi|408088037|gb|EKH21432.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA504]
gi|408094314|gb|EKH27350.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1999]
gi|408100535|gb|EKH33034.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1997]
gi|408105457|gb|EKH37625.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE1487]
gi|408118363|gb|EKH49506.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK2001]
gi|408124634|gb|EKH55292.1| transcriptional regulatory protein zraR [Escherichia coli PA4]
gi|408134583|gb|EKH64407.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA23]
gi|408136222|gb|EKH65971.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA49]
gi|408143505|gb|EKH72802.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA45]
gi|408151781|gb|EKH80260.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TT12B]
gi|408156947|gb|EKH85132.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
MA6]
gi|408170031|gb|EKH97262.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
CB7326]
gi|408223286|gb|EKI47069.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1735]
gi|408234472|gb|EKI57486.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1736]
gi|408236966|gb|EKI59834.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1737]
gi|408242647|gb|EKI65214.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1846]
gi|408251491|gb|EKI73221.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1847]
gi|408255901|gb|EKI77321.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1848]
gi|408262583|gb|EKI83518.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1849]
gi|408270785|gb|EKI90951.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1850]
gi|408273740|gb|EKI93782.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1856]
gi|408281883|gb|EKJ01251.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1862]
gi|408287940|gb|EKJ06780.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1864]
gi|408302916|gb|EKJ20392.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1868]
gi|408304086|gb|EKJ21524.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1866]
gi|408315475|gb|EKJ31791.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1869]
gi|408321080|gb|EKJ37131.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1870]
gi|408322492|gb|EKJ38477.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE098]
gi|408333887|gb|EKJ48806.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK523]
gi|408341340|gb|EKJ55794.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
0.1304]
gi|408544577|gb|EKK22028.1| transcriptional regulatory protein zraR [Escherichia coli 3.4870]
gi|408545388|gb|EKK22823.1| transcriptional regulatory protein zraR [Escherichia coli 6.0172]
gi|408562950|gb|EKK39097.1| transcriptional regulatory protein zraR [Escherichia coli 8.0586]
gi|408575463|gb|EKK51133.1| transcriptional regulatory protein zraR [Escherichia coli 10.0833]
gi|408578151|gb|EKK53688.1| transcriptional regulatory protein zraR [Escherichia coli 8.2524]
gi|408593036|gb|EKK67377.1| transcriptional regulatory protein zraR [Escherichia coli 88.0221]
gi|408598657|gb|EKK72609.1| transcriptional regulatory protein zraR [Escherichia coli 8.0416]
gi|408608255|gb|EKK81656.1| transcriptional regulatory protein zraR [Escherichia coli 10.0821]
gi|427201024|gb|EKV71430.1| transcriptional regulatory protein zraR [Escherichia coli 88.1042]
gi|427201071|gb|EKV71471.1| transcriptional regulatory protein zraR [Escherichia coli 89.0511]
gi|427204141|gb|EKV74427.1| transcriptional regulatory protein zraR [Escherichia coli 88.1467]
gi|427217157|gb|EKV86229.1| transcriptional regulatory protein zraR [Escherichia coli 90.0091]
gi|427221044|gb|EKV89924.1| transcriptional regulatory protein zraR [Escherichia coli 90.2281]
gi|427223716|gb|EKV92446.1| transcriptional regulatory protein zraR [Escherichia coli 90.0039]
gi|427237446|gb|EKW04987.1| transcriptional regulatory protein zraR [Escherichia coli 93.0056]
gi|427237560|gb|EKW05094.1| transcriptional regulatory protein zraR [Escherichia coli 93.0055]
gi|427241819|gb|EKW09240.1| transcriptional regulatory protein zraR [Escherichia coli 94.0618]
gi|427255502|gb|EKW21766.1| transcriptional regulatory protein zraR [Escherichia coli 95.0183]
gi|427257039|gb|EKW23180.1| transcriptional regulatory protein zraR [Escherichia coli 95.0943]
gi|427257238|gb|EKW23370.1| transcriptional regulatory protein zraR [Escherichia coli 95.1288]
gi|427272801|gb|EKW37520.1| transcriptional regulatory protein zraR [Escherichia coli 96.0428]
gi|427274410|gb|EKW39068.1| transcriptional regulatory protein zraR [Escherichia coli 96.0427]
gi|427280132|gb|EKW44511.1| transcriptional regulatory protein zraR [Escherichia coli 96.0939]
gi|427288694|gb|EKW52309.1| transcriptional regulatory protein zraR [Escherichia coli 96.0932]
gi|427295560|gb|EKW58661.1| transcriptional regulatory protein zraR [Escherichia coli 96.0107]
gi|427296909|gb|EKW59954.1| transcriptional regulatory protein zraR [Escherichia coli 97.0003]
gi|427307232|gb|EKW69713.1| transcriptional regulatory protein zraR [Escherichia coli 97.1742]
gi|427310044|gb|EKW72315.1| transcriptional regulatory protein zraR [Escherichia coli 97.0007]
gi|427314908|gb|EKW76930.1| transcriptional regulatory protein zraR [Escherichia coli 99.0672]
gi|427324609|gb|EKW86077.1| transcriptional regulatory protein zraR [Escherichia coli 99.0678]
gi|427325620|gb|EKW87056.1| transcriptional regulatory protein zraR [Escherichia coli 99.0713]
gi|429250416|gb|EKY35076.1| transcriptional regulatory protein zraR [Escherichia coli 96.0109]
gi|429250913|gb|EKY35551.1| transcriptional regulatory protein zraR [Escherichia coli 97.0010]
gi|444534690|gb|ELV14894.1| transcriptional regulatory protein zraR [Escherichia coli 99.0814]
gi|444545018|gb|ELV23982.1| transcriptional regulatory protein zraR [Escherichia coli 99.0815]
gi|444553895|gb|ELV31487.1| transcriptional regulatory protein zraR [Escherichia coli 99.0816]
gi|444555426|gb|ELV32895.1| transcriptional regulatory protein zraR [Escherichia coli 99.0839]
gi|444558964|gb|ELV36223.1| transcriptional regulatory protein zraR [Escherichia coli 99.0848]
gi|444568527|gb|ELV45200.1| transcriptional regulatory protein zraR [Escherichia coli 99.1753]
gi|444571723|gb|ELV48192.1| transcriptional regulatory protein zraR [Escherichia coli 99.1775]
gi|444587586|gb|ELV63015.1| transcriptional regulatory protein zraR [Escherichia coli 99.1805]
gi|444588916|gb|ELV64275.1| transcriptional regulatory protein zraR [Escherichia coli PA11]
gi|444602808|gb|ELV77538.1| transcriptional regulatory protein zraR [Escherichia coli PA13]
gi|444602837|gb|ELV77566.1| transcriptional regulatory protein zraR [Escherichia coli PA19]
gi|444611988|gb|ELV86299.1| transcriptional regulatory protein zraR [Escherichia coli PA2]
gi|444618339|gb|ELV92425.1| transcriptional regulatory protein zraR [Escherichia coli PA47]
gi|444626063|gb|ELV99869.1| transcriptional regulatory protein zraR [Escherichia coli PA8]
gi|444634751|gb|ELW08206.1| transcriptional regulatory protein zraR [Escherichia coli 7.1982]
gi|444636484|gb|ELW09881.1| transcriptional regulatory protein zraR [Escherichia coli 99.1781]
gi|444641654|gb|ELW14882.1| transcriptional regulatory protein zraR [Escherichia coli 99.1762]
gi|444650934|gb|ELW23747.1| transcriptional regulatory protein zraR [Escherichia coli PA35]
gi|444658746|gb|ELW31184.1| transcriptional regulatory protein zraR [Escherichia coli 95.0083]
gi|444666371|gb|ELW38445.1| transcriptional regulatory protein zraR [Escherichia coli 99.0670]
Length = 441
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|444927761|ref|ZP_21247010.1| transcriptional regulatory protein zraR [Escherichia coli
09BKT078844]
gi|444535903|gb|ELV15952.1| transcriptional regulatory protein zraR [Escherichia coli
09BKT078844]
Length = 441
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|379025622|dbj|BAL63588.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025624|dbj|BAL63589.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359226|dbj|BAM93442.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 186
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
G LL I + D+PVIMMS+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 150 VRK 152
R+
Sbjct: 158 WRR 160
>gi|86609993|ref|YP_478755.1| DNA-binding response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558535|gb|ABD03492.1| DNA-binding response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 246
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+LVVDD+ + RILE L Y+V T S AL++ ++ D+V+ DV MP +DG
Sbjct: 8 RILVVDDEASIRRILETRLSMIGYDVVTASDGEEALEVFHKQDP--DLVVLDVMMPKLDG 65
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 66 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 123
>gi|416319542|ref|ZP_11662094.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. EC1212]
gi|420300246|ref|ZP_14802290.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09109]
gi|420312590|ref|ZP_14814510.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1738]
gi|424086743|ref|ZP_17823208.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA517]
gi|424099849|ref|ZP_17835081.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1985]
gi|424137293|ref|ZP_17869708.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA10]
gi|425106900|ref|ZP_18509195.1| transcriptional regulatory protein zraR [Escherichia coli 5.2239]
gi|425202557|ref|ZP_18598746.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE037]
gi|425297489|ref|ZP_18687592.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA38]
gi|444972242|ref|ZP_21289566.1| transcriptional regulatory protein zraR [Escherichia coli 99.1793]
gi|445047880|ref|ZP_21363114.1| transcriptional regulatory protein zraR [Escherichia coli 3.4880]
gi|320190898|gb|EFW65548.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. EC1212]
gi|390637968|gb|EIN17497.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA517]
gi|390655575|gb|EIN33502.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1985]
gi|390691573|gb|EIN66310.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA10]
gi|390805479|gb|EIO72424.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09109]
gi|390897400|gb|EIP56729.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1738]
gi|408112214|gb|EKH43883.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE037]
gi|408209946|gb|EKI34521.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA38]
gi|408544317|gb|EKK21775.1| transcriptional regulatory protein zraR [Escherichia coli 5.2239]
gi|444575229|gb|ELV51478.1| transcriptional regulatory protein zraR [Escherichia coli 99.1793]
gi|444656713|gb|ELW29233.1| transcriptional regulatory protein zraR [Escherichia coli 3.4880]
Length = 441
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|159471197|ref|XP_001693743.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283246|gb|EDP08997.1| predicted protein [Chlamydomonas reinhardtii]
Length = 366
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP+ L VL++D D + +E L+ Y VT CS + A L++ FD++L+DV
Sbjct: 21 FPSDLSVLLLDPDFKARQEVEAQLKENNYAVTPCSCSFEAAAHLQDADKHFDLLLADVRC 80
Query: 90 PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 149
+ + +P+++MS G + VM GI+ GA D+L KP+ +LKNIWQH+
Sbjct: 81 MQQQSAEHKAVVQAAKSIPLVLMSESGAPNEVMLGIKLGAVDFLEKPLSPLKLKNIWQHL 140
Query: 150 VRK 152
VR+
Sbjct: 141 VRR 143
>gi|410099296|ref|ZP_11294268.1| hypothetical protein HMPREF1076_03446 [Parabacteroides goldsteinii
CL02T12C30]
gi|409219318|gb|EKN12281.1| hypothetical protein HMPREF1076_03446 [Parabacteroides goldsteinii
CL02T12C30]
Length = 372
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D AG VL+VDD T + +++ +L++ Y + TC A AL + ++ +++L D+
Sbjct: 2 DNLAAGYTVLIVDDVPTNVMLVQAILKKEGYKLLTCDSGAKALRLAHDKHP--NLILLDI 59
Query: 88 HMPDMDGFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
MP+MDG+++L+H+ D+PVI+MSA + ++++G + GA +Y+ KP + EEL
Sbjct: 60 MMPEMDGYEVLQHLKSNPDTNDIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQREEL 117
>gi|89072496|ref|ZP_01159068.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium sp. SKA34]
gi|89051600|gb|EAR57053.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium sp. SKA34]
Length = 1132
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P G +LVVDD+ L+IL LR Y V T A+DI+++++ D++L D+ MP
Sbjct: 716 PEGDLILVVDDEPVNLQILNNFLRLAGYRVKTAESGHQAIDIVQQQRP--DLILLDIMMP 773
Query: 91 DMDGFK---LLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+M G++ LL +LP++M+SA G++ ++G GA DYL KP +EEL Q
Sbjct: 774 EMSGYEVCTLLRKQYSIFELPIMMLSALGQIQDRIKGFECGANDYLTKPFNKEELIARIQ 833
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEI 179
++ E ++ N +E H+R E+
Sbjct: 834 AYLQASKTEQEKQRNVTLQQEI--HRREQVEV 863
>gi|254478010|ref|ZP_05091394.1| response regulator receiver domain protein [Carboxydibrachium
pacificum DSM 12653]
gi|214036014|gb|EEB76704.1| response regulator receiver domain protein [Carboxydibrachium
pacificum DSM 12653]
Length = 267
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 93/172 (54%), Gaps = 7/172 (4%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDD + +++ +L YNV + + A+ ++ RK FD+++ D+++PD +GF
Sbjct: 10 ILVVDDSVLVRLMVKDILGGEGYNVVAAATSEEAVRKIKSRKELFDLIIVDINLPDQNGF 69
Query: 96 KLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + ++ E +PVI++S D V ++ R + GA DYL+KP + EEL + ++
Sbjct: 70 EFIRNLKSEEKYKHIPVIILSIDATVPSIKRAVEAGAVDYLVKPFKAEELVKRVEKLIGS 129
Query: 153 RWNENKEHENSGSL-EETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAK 203
E++ E L +E + +RG++ + S V EG Q +I+ K
Sbjct: 130 VKKEDRYPELKDLLKKEVNRARRGNENL---SLVLAHCEGKIAGQISKIAEK 178
>gi|381161480|ref|ZP_09870710.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Saccharomonospora azurea NA-128]
gi|379253385|gb|EHY87311.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Saccharomonospora azurea NA-128]
Length = 257
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Query: 8 VQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
++SSGG G R + + P R+L+++DD LE L R + V
Sbjct: 9 IRSSGGVGRDGRRKGETTITMLSPTMSRILLIEDDPAVREGLELALSRQGHTVDAVESGE 68
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRH 127
LD R R DVV+ D+ +P MDGF++ G D+P+IM++A G V+ G+
Sbjct: 69 QGLD--RLRTDPPDVVVLDLMLPGMDGFEVCRRAGATTDVPIIMLTARGDDMDVVAGLEA 126
Query: 128 GACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSL 166
GA DY++KP++ L+ + V+R+ E + E G L
Sbjct: 127 GADDYVVKPVQPRVLEARIRAVLRRIGREQSDLERHGEL 165
>gi|88807098|ref|ZP_01122610.1| two component transcriptional regulator, winged helix family
protein [Synechococcus sp. WH 7805]
gi|88788312|gb|EAR19467.1| two component transcriptional regulator, winged helix family
protein [Synechococcus sp. WH 7805]
Length = 248
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P +LVVDD+ + RILE L YNV T AL +E + D+V+ DV MP
Sbjct: 6 PTKETILVVDDEASIRRILETRLSMIGYNVVTACDGTEALTCFQECEP--DLVVLDVMMP 63
Query: 91 DMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
+DG+ + + + E D+P++M++A G V+ + G+ GA DY+IKP +EL+ + V+
Sbjct: 64 KLDGYGVCQELRKESDVPIVMLTALGDVADRITGLELGADDYVIKPFSPKELEARIRCVL 123
Query: 151 RKRWNENKEH-ENSGSLEETD 170
R+ EN NSG ++ +D
Sbjct: 124 RRVEKENAAGIPNSGMIKVSD 144
>gi|345886077|ref|ZP_08837351.1| hypothetical protein HMPREF0178_00125 [Bilophila sp. 4_1_30]
gi|345040822|gb|EGW45046.1| hypothetical protein HMPREF0178_00125 [Bilophila sp. 4_1_30]
Length = 616
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VLVVDDD T LRIL L R Y + AL+ + K D+VL DV MPDMDG+
Sbjct: 10 VLVVDDDPTNLRILVSKLNRE-YRLGVAKSGTKALEYMG--KQIPDLVLLDVMMPDMDGY 66
Query: 96 KLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEE-LKNIWQHVVR 151
+ EHI + D+PV+ +S S RG G DY+ KP + E L + H++
Sbjct: 67 AVCEHIKRDPRLCDIPVVFISYVDDPSQKTRGFEVGGVDYITKPFHDAEVLARVRTHIMN 126
Query: 152 KRWNENKEHENSGSLEETDHHKR 174
K+ E + N+ +E D H+R
Sbjct: 127 KQMREQLKRHNAEIGKELDEHRR 149
>gi|74316103|ref|YP_313843.1| response regulator receiver modulated PAS/PAC sensor-containing
diguanylate cyclase/phosphodiesterase [Thiobacillus
denitrificans ATCC 25259]
gi|74055598|gb|AAZ96038.1| Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL
domains) with PAS/PAC sensor(s) and Response Regulator
Receiver modulation [Thiobacillus denitrificans ATCC
25259]
Length = 738
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 4/133 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPA R+LVVDD+I L + ++L Y+VTT + AL + +++ FDV+L D+ M
Sbjct: 25 FPARPRILVVDDEILILEGMRRLLAARDYDVTTANGGCEALIAIGKQQ--FDVILLDLGM 82
Query: 90 PDMDGFKLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEE-LKNIWQ 147
PD+ G ++L + D PVI++S D + A +R +R GA D++ KP EE L+ +
Sbjct: 83 PDLSGAEVLRFVADRSADTPVIVVSGDSTIDAAIRALRGGAADFVRKPYEPEELLRRVDN 142
Query: 148 HVVRKRWNENKEH 160
+ R+R H
Sbjct: 143 TLTRRRLERENNH 155
>gi|317485575|ref|ZP_07944452.1| sigma-54 interaction domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316923255|gb|EFV44464.1| sigma-54 interaction domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 616
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VLVVDDD T LRIL L R Y + AL+ + K D+VL DV MPDMDG+
Sbjct: 10 VLVVDDDPTNLRILVSKLNRE-YRLGVAKSGTKALEYMG--KQIPDLVLLDVMMPDMDGY 66
Query: 96 KLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEE-LKNIWQHVVR 151
+ EHI + D+PV+ +S S RG G DY+ KP + E L + H++
Sbjct: 67 AVCEHIKRDPRLCDIPVVFISYVDDPSQKTRGFEVGGVDYITKPFHDAEVLARVRTHIMN 126
Query: 152 KRWNENKEHENSGSLEETDHHKR 174
K+ E + N+ +E D H+R
Sbjct: 127 KQMREQLKRHNAEIGKELDEHRR 149
>gi|282898472|ref|ZP_06306462.1| Two component Transcriptional regulator, Winged helix family
[Raphidiopsis brookii D9]
gi|281196638|gb|EFA71544.1| Two component Transcriptional regulator, Winged helix family
[Raphidiopsis brookii D9]
Length = 242
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T AL+ R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KANPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|119486641|ref|ZP_01620691.1| Two component Transcriptional regulator, Winged helix family
protein [Lyngbya sp. PCC 8106]
gi|119456258|gb|EAW37390.1| Two component Transcriptional regulator, Winged helix family
protein [Lyngbya sp. PCC 8106]
Length = 243
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + AL+ R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFR--KTEPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|242092550|ref|XP_002436765.1| hypothetical protein SORBIDRAFT_10g008400 [Sorghum bicolor]
gi|241914988|gb|EER88132.1| hypothetical protein SORBIDRAFT_10g008400 [Sorghum bicolor]
Length = 466
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 14/126 (11%)
Query: 164 GSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTK---- 219
G E D H G + + EG GT ++ S + E ES S+ K
Sbjct: 130 GKGECNDDHAEGEEVVAGNGDSGEGGCGTVLGEKSPSSTTSQ---EAESRHKSSNKHSHG 186
Query: 220 --KPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 277
K +V W+ +LH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R
Sbjct: 187 KKKAKVDWTPDLHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASH-----LQKYR 241
Query: 278 LYLKRL 283
+ K +
Sbjct: 242 SHRKHM 247
>gi|295913129|gb|ADG57826.1| transcription factor [Lycoris longituba]
Length = 207
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 8/89 (8%)
Query: 187 EGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAV 246
E E + + Q+KR S + ++ +K +V W+ +LH++FV AV QLGID+A+
Sbjct: 21 ENVESSVEYQKKRKS--------FPCSNKNSRRKMKVDWTPDLHRKFVQAVEQLGIDQAI 72
Query: 247 PKRILELMNVPGLTRENVASHLQEINLQK 275
P +ILELMNV GLTR N+ASHLQ+ + +
Sbjct: 73 PSKILELMNVEGLTRHNIASHLQKYRMNR 101
>gi|356565422|ref|XP_003550939.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 576
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 47/63 (74%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK +V W+ ELH++FV AV QLGID+A+P RILELM V LTR NVASHLQ+ + K ++
Sbjct: 336 KKIKVDWTPELHKKFVKAVEQLGIDQAIPSRILELMKVESLTRHNVASHLQKYRMHKRQI 395
Query: 279 YLK 281
K
Sbjct: 396 LPK 398
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A D+ FP GL+VL+ + D + L YNV+T AL ++ F
Sbjct: 28 ANDLQEWKDFPKGLKVLLHERDNISAAEIRAKLEAMDYNVSTFCDENDALSVISSGLESF 87
Query: 81 DVVLSDVHMPDMDG-FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIRE 139
+ + +V G FK LE+ DLP IM S + ++ +M+ I GA ++L KP+ E
Sbjct: 88 HIAIVEVSSSSAQGGFKFLENAK---DLPTIMTSNNHCLNTMMKCIALGAVEFLSKPLSE 144
Query: 140 EELKNIWQHVVRKRWN 155
++L+NIWQHVV K +N
Sbjct: 145 DKLRNIWQHVVHKAFN 160
>gi|330447454|ref|ZP_08311103.1| HAMP domain protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328491645|dbj|GAA05600.1| HAMP domain protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 1114
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 83/152 (54%), Gaps = 7/152 (4%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P G +LVVDD+ L+IL LR Y V T AL ++ E++ D++L D+ MP
Sbjct: 702 PNGDLILVVDDEPVNLQILNNFLRLAGYRVKTAENGPQALAMVEEQRP--DLILLDIMMP 759
Query: 91 DMDGFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+M G+++ + + +LP++M+SA G++ ++G GA DYL KP +EEL Q
Sbjct: 760 EMSGYEVCTILRKQYSIFELPIMMLSALGQIQDRIKGFECGANDYLTKPFNKEELIARIQ 819
Query: 148 HVVRKRWNENKEHENSGSLEETDHHKRGSDEI 179
++ E+++ +N +E H+R EI
Sbjct: 820 AYLQASKTEHEKQKNQSLQQEI--HRREQVEI 849
>gi|300869112|ref|ZP_07113711.1| two component transcriptional regulator [Oscillatoria sp. PCC 6506]
gi|300332881|emb|CBN58907.1| two component transcriptional regulator [Oscillatoria sp. PCC 6506]
Length = 247
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALD R D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTFRNTDP--DLVVLDVMMPKLDG 68
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 69 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|147794999|emb|CAN71929.1| hypothetical protein VITISV_001044 [Vitis vinifera]
Length = 563
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 5/65 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK +V W ELH++FV AV QLG+D+A+P RILELM V GLTR NVASH LQK+R+
Sbjct: 321 KKMKVDWXPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASH-----LQKYRM 375
Query: 279 YLKRL 283
+ + +
Sbjct: 376 HRRHI 380
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A D+ FP GLRVL++DDD T + L Y V+T AL + + F
Sbjct: 5 ANDLQEWKDFPKGLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPESF 64
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGI------RHGACDYLI 134
V + +V + FK LE DLP I ++ + + + GA ++L
Sbjct: 65 HVAIVEVSTGNNGSFKFLE---TAKDLPTIRAGMHFLLTISLMDVFDNQMFQLGAVEFLR 121
Query: 135 KPIREEELKNIWQHVVRKRWN 155
KP+ E++L+NIWQHVV K +N
Sbjct: 122 KPLSEDKLRNIWQHVVHKAFN 142
>gi|343505269|ref|ZP_08742847.1| transcriptional regulatory protein CpxR [Vibrio ichthyoenteri ATCC
700023]
gi|342808228|gb|EGU43390.1| transcriptional regulatory protein CpxR [Vibrio ichthyoenteri ATCC
700023]
Length = 252
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L +L+V+DDI L +L+ Y V+ A AL +L+ R+ FD++L DV++P++D
Sbjct: 24 LSILLVEDDINLNHQLTALLQSEHYCVSNVECGAKALTLLKMRQ--FDLILLDVNIPNID 81
Query: 94 GFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
GF LL+++ PVIM++A G ++G+R+GA DY+ KP EE+K + V+R+
Sbjct: 82 GFGLLKYVRSHSRTPVIMLTAYGAEEHRIKGLRYGADDYISKPCNFEEVKLRIEAVLRR 140
>gi|427418250|ref|ZP_18908433.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
gi|425760963|gb|EKV01816.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
Length = 263
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALD R D+V+ DV MP +DG
Sbjct: 28 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTFRHE--IPDLVVLDVMMPKLDG 85
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 86 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 143
>gi|218247106|ref|YP_002372477.1| winged helix family two component transcriptional regulator
[Cyanothece sp. PCC 8801]
gi|257060175|ref|YP_003138063.1| winged helix family two component transcriptional regulator
[Cyanothece sp. PCC 8802]
gi|218167584|gb|ACK66321.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. PCC 8801]
gi|256590341|gb|ACV01228.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. PCC 8802]
Length = 243
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALD K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTFH--KADPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|302143340|emb|CBI21901.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 8/86 (9%)
Query: 201 SAKEEDDGE---LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 257
S KE + G +S +P +K +V W+ ELH++FV AV QLG+DKAVP RILE+M +
Sbjct: 72 SPKEVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGID 131
Query: 258 GLTRENVASHLQEINLQKFRLYLKRL 283
LTR N+ASH LQK+R + K L
Sbjct: 132 CLTRHNIASH-----LQKYRSHRKHL 152
>gi|302873857|ref|YP_003842490.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|307689897|ref|ZP_07632343.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|302576714|gb|ADL50726.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
Length = 366
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 78/133 (58%), Gaps = 6/133 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+++LVVDD ++I+ +L+ YN+ + + AL++++ + F+++L DV MP+MD
Sbjct: 7 IKILVVDDTPFNIKIVSTILQEVGYNIYSTTSGREALEMVKNIR--FNLILLDVMMPEMD 64
Query: 94 GFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEE-LKNIWQHV 149
G++++ + + D+P+I ++A G +V+R GA DYLIKP +E L + H+
Sbjct: 65 GYEVIRKLKNDEDTRDIPIIFLTARGDSESVVRAFDEGAYDYLIKPFNPKELLSRVKTHI 124
Query: 150 VRKRWNENKEHEN 162
K EN E N
Sbjct: 125 ELKFARENLEEAN 137
>gi|410861006|ref|YP_006976240.1| two-component system response regulator [Alteromonas macleodii
AltDE1]
gi|410818268|gb|AFV84885.1| two-component system response regulator [Alteromonas macleodii
AltDE1]
Length = 446
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L+VDDD + LR+L L Y+VT AL L+ FDVVLSD+ MP +DG
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYDVTAVEDGQSALRKLQ--NDSFDVVLSDLRMPGLDGL 68
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
L E I G+ D+PVI+M+A G ++ + + G +L KP+ +EL+ + Q
Sbjct: 69 SLFEEIMGIRKDIPVILMTAHGTIADAVAATQRGVFGFLPKPVDHDELRTLLQ 121
>gi|428307458|ref|YP_007144283.1| winged helix family two component transcriptional regulator
[Crinalium epipsammum PCC 9333]
gi|428248993|gb|AFZ14773.1| two component transcriptional regulator, winged helix family
[Crinalium epipsammum PCC 9333]
Length = 241
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + AL+ R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFR--KAEPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|428301223|ref|YP_007139529.1| winged helix family two component transcriptional regulator
[Calothrix sp. PCC 6303]
gi|428237767|gb|AFZ03557.1| two component transcriptional regulator, winged helix family
[Calothrix sp. PCC 6303]
Length = 242
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T AL+ R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KAEPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|318040122|ref|ZP_07972078.1| two-component response regulator [Synechococcus sp. CB0101]
Length = 254
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
+P+ L++L+ DD+ RILE L + V AL++ R + DVV+
Sbjct: 1 MPETIQEPLKILIADDEANIRRILETRLAMQGHQVAAAQDGTEALELFRSVEP--DVVVL 58
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 145
DV MP++DGF +LE I + ++PVIM++A G V+ + G+ GA DY++KP +EL+
Sbjct: 59 DVMMPELDGFAVLERIRAQSEVPVIMLTALGDVADRITGLELGADDYMVKPFSPKELEAR 118
Query: 146 WQHVVRK 152
Q V+R+
Sbjct: 119 IQCVMRR 125
>gi|328952068|ref|YP_004369402.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
gi|328452392|gb|AEB08221.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
Length = 455
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDD+ L ++E +L Y V T AL++ R+ D+V++D+ MP M G
Sbjct: 4 ILVVDDEKNYLLVMETLLAGAGYEVFTADSGETALEL--TRRNDLDLVVTDMKMPRMSGI 61
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
+LLE + + DLPVIMM+A G V + ++ GA DY++KP + EE+
Sbjct: 62 ELLEQLKQVYPDLPVIMMTAYGTVEKAVEAMKKGAFDYILKPFKNEEI 109
>gi|308809964|ref|XP_003082291.1| ARR1 like protein (ISS) [Ostreococcus tauri]
gi|116060759|emb|CAL57237.1| ARR1 like protein (ISS) [Ostreococcus tauri]
Length = 205
Score = 79.0 bits (193), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE--INLQKF 276
K+ R+VW+ LH QFV+ V +LG+D AVPK I+++MNV GLTRENVASHLQ+ INL++
Sbjct: 74 KRARLVWTPALHAQFVAPVEKLGVDAAVPKSIMKIMNVEGLTRENVASHLQKYRINLKRK 133
Query: 277 RLYLKRLNGVSQQGGITNS 295
+ + G+ G T S
Sbjct: 134 KFSSESTEGLDDTDGDTRS 152
>gi|224284346|gb|ACN39908.1| unknown [Picea sitchensis]
Length = 206
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 19/181 (10%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP GL VLVVD D L ++ L Y VTT ++ A+ L + F V L +
Sbjct: 13 KFPKGLHVLVVDKDPATLHDIKAKLEARRYRVTTFERSEDAVSALTNPESSFHVAL--IE 70
Query: 89 MPD----MDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
D +DGF +L+ + ++P IMMS ++R GA + L KP+ +++LKN
Sbjct: 71 QADFGERLDGFDILDAENRK-NIPTIMMSNTDNTEVMLRAFALGAVEILQKPLSDDKLKN 129
Query: 145 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 204
+WQH VRK + ++E TD + +DE ++ EG EG + + AK+
Sbjct: 130 VWQHAVRKAL--------ATAIEPTDDSQNVADE----ETLWEGEEGGLVIESTSLLAKQ 177
Query: 205 E 205
+
Sbjct: 178 K 178
>gi|282898613|ref|ZP_06306601.1| Two component Transcriptional regulator, Winged helix family
[Cylindrospermopsis raciborskii CS-505]
gi|281196481|gb|EFA71390.1| Two component Transcriptional regulator, Winged helix family
[Cylindrospermopsis raciborskii CS-505]
Length = 242
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T AL+ R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KADPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|381151411|ref|ZP_09863280.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Methylomicrobium album BG8]
gi|380883383|gb|EIC29260.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Methylomicrobium album BG8]
Length = 450
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+LV+DDD + L +MLR+ Y+VT C+Q AL+ + K FD+V+SDV MP M G
Sbjct: 7 RLLVIDDDPGVVDYLLEMLRQQGYSVTGCTQTGQALEAIE--KEPFDLVVSDVVMPGMRG 64
Query: 95 FKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
+L+ I + + V++++A G + ++ +R GACD+L KP R EEL
Sbjct: 65 LELMAAIHRKRPEQLVLLITAFGSIDLAIQSMRAGACDFLTKPFRIEEL 113
>gi|443312755|ref|ZP_21042370.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechocystis sp. PCC 7509]
gi|442777211|gb|ELR87489.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechocystis sp. PCC 7509]
Length = 256
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + AL+I R K ++V+ DV MP +DG
Sbjct: 21 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEIFR--KAEPNLVVLDVMMPKLDG 78
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 79 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 136
>gi|421778340|ref|ZP_16214917.1| response regulator receiver domain protein [Escherichia coli AD30]
gi|408456570|gb|EKJ80384.1| response regulator receiver domain protein [Escherichia coli AD30]
Length = 441
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + L+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQTLEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|82778820|ref|YP_405169.1| transcriptional regulatory protein ZraR [Shigella dysenteriae
Sd197]
gi|309783961|ref|ZP_07678606.1| transcriptional regulatory protein zraR [Shigella dysenteriae 1617]
gi|81242968|gb|ABB63678.1| sensor HydH response regulator of hydrogenase 3 activity [Shigella
dysenteriae Sd197]
gi|308928332|gb|EFP73794.1| transcriptional regulatory protein zraR [Shigella dysenteriae 1617]
Length = 441
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSERQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L+ +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALKPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|307149957|ref|YP_003885341.1| winged helix family two component transcriptional regulator
[Cyanothece sp. PCC 7822]
gi|306980185|gb|ADN12066.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. PCC 7822]
Length = 242
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + AL+ R+ D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRQTNP--DLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|409993465|ref|ZP_11276605.1| two component transcriptional regulator [Arthrospira platensis str.
Paraca]
gi|291569758|dbj|BAI92030.1| two-component response regulator [Arthrospira platensis NIES-39]
gi|409935677|gb|EKN77201.1| two component transcriptional regulator [Arthrospira platensis str.
Paraca]
Length = 243
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+LVVDD+ + RILE L Y+V T + AL+ R + D+V+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRLTEP--DLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|421847857|ref|ZP_16280987.1| transcriptional regulatory protein ZraR [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|411770738|gb|EKS54487.1| transcriptional regulatory protein ZraR [Citrobacter freundii ATCC
8090 = MTCC 1658]
Length = 441
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR Y V AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWSYEVALAYSGRAALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
L+ I L +PV++M+A V + ++ GA DYLIKP+ + L+ + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAVEALKTGALDYLIKPLDFDRLQETLEKAL 121
>gi|407474743|ref|YP_006789143.1| two-component response regulator [Clostridium acidurici 9a]
gi|407051251|gb|AFS79296.1| two-component response regulator [Clostridium acidurici 9a]
Length = 188
Score = 79.0 bits (193), Expect = 9e-12, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVV+DDI +++ L + Y +T S L+ ++ K +D+V+ D+ MP+MDG
Sbjct: 4 KILVVEDDIEIAFAIKEFLAKKRYAITWTSTGKEGLEEFQKNK--YDLVIVDIMMPEMDG 61
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK-NIWQHVVR-K 152
F L ++I ++ D+P+++MSA + ++G+ GA DY+ KP EL+ I H+ R K
Sbjct: 62 FTLCKNIRMKSDIPILIMSAKSQEKDKVKGLNIGADDYITKPFSLVELEARIDSHIRRYK 121
Query: 153 RW-NENKEHE 161
R+ ENKE +
Sbjct: 122 RYLGENKEEK 131
>gi|218441116|ref|YP_002379445.1| winged helix family two component transcriptional regulator
[Cyanothece sp. PCC 7424]
gi|218173844|gb|ACK72577.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. PCC 7424]
Length = 247
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + AL+ R+ D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRQTSP--DLVVLDVMMPKLDG 68
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 69 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|381149243|gb|AFF60404.1| golden 2-like 1 transcription factor [Solanum lycopersicum]
gi|391868374|gb|AFM44934.1| golden1-like protein [Solanum lycopersicum]
Length = 464
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 184 SVNEGTEGTFKAQRKRISAKEEDDGELESDDPST--TKKPRVVWSVELHQQFVSAVNQLG 241
S + E T + + ++ KE D G+ S + + +K +V W+ ELH++FV AV QLG
Sbjct: 138 STQKSEESTQQRNQNIVTPKESDKGKKSSKNHNLPGKRKVKVDWTPELHRRFVQAVEQLG 197
Query: 242 IDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 283
+DKAVP RILE+M + LTR N+ASH LQK+R + K L
Sbjct: 198 VDKAVPSRILEIMGIDCLTRHNIASH-----LQKYRSHRKHL 234
>gi|302344713|ref|YP_003809242.1| Fis family transcriptional regulator [Desulfarculus baarsii DSM
2075]
gi|301641326|gb|ADK86648.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfarculus baarsii DSM 2075]
Length = 467
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VLVVDD+ R+LE ML+R Y V T AL+ + FDVV+ D+ MPD+DG
Sbjct: 16 VLVVDDEQHVRRVLEVMLQRQGYGVETAGGGGEALE--KFAADVFDVVILDLKMPDIDGI 73
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
+L H+ L+ D VIM++A V + ++ GA DY+ KP +E+E+ + + + +R
Sbjct: 74 TVLGHLRQLDPDQTVIMITAYASVDTALAAMKQGAFDYVGKPFKEDEILLVLEKAMERR 132
>gi|119511035|ref|ZP_01630155.1| Two component Transcriptional regulator, Winged helix family
protein [Nodularia spumigena CCY9414]
gi|119464286|gb|EAW45203.1| Two component Transcriptional regulator, Winged helix family
protein [Nodularia spumigena CCY9414]
Length = 242
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T AL+ R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KSEPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|75908099|ref|YP_322395.1| two component transcriptional regulator [Anabaena variabilis ATCC
29413]
gi|427709346|ref|YP_007051723.1| winged helix family two component transcriptional regulator [Nostoc
sp. PCC 7107]
gi|427715805|ref|YP_007063799.1| winged helix family two component transcriptional regulator
[Calothrix sp. PCC 7507]
gi|75701824|gb|ABA21500.1| two component transcriptional regulator, winged helix family
[Anabaena variabilis ATCC 29413]
gi|427348241|gb|AFY30965.1| two component transcriptional regulator, winged helix family
[Calothrix sp. PCC 7507]
gi|427361851|gb|AFY44573.1| two component transcriptional regulator, winged helix family
[Nostoc sp. PCC 7107]
Length = 242
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T AL+ R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KSDPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|323490769|ref|ZP_08095971.1| two-component response regulator [Planococcus donghaensis MPA1U2]
gi|323395651|gb|EGA88495.1| two-component response regulator [Planococcus donghaensis MPA1U2]
Length = 218
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Query: 37 LVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFK 96
++VDD+ L ++ LR Y T + AL++L+ K FD+VL D+ MPDMDG++
Sbjct: 1 MLVDDEKRMLDLVALYLRPHHYVCTKAANGYQALELLK--KESFDLVLLDIMMPDMDGWE 58
Query: 97 LLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ I D+P+IM++A + V++G+R GA DY+ KP EEEL + V+R+
Sbjct: 59 VCRDIRKFSDIPIIMLTAREQQEDVVKGLRLGADDYMTKPFGEEELLARMEAVLRR 114
>gi|298490023|ref|YP_003720200.1| winged helix family two component transcriptional regulator
['Nostoc azollae' 0708]
gi|298231941|gb|ADI63077.1| two component transcriptional regulator, winged helix family
['Nostoc azollae' 0708]
Length = 242
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T AL+ R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KAEPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|302344196|ref|YP_003808725.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
gi|301640809|gb|ADK86131.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
Length = 139
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/137 (34%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA---VALDILRERKGCFDVVLSDVHM 89
LRVL+VDD ++++ L+ +++ C + A ALD+LR+ + DVVLSD+HM
Sbjct: 2 ALRVLIVDDSAAMRAMVKKTLKAAGFSLDKCYEGANGLEALDVLRQNE--VDVVLSDLHM 59
Query: 90 PDMDGFKLLEHIGLEMDLP--VIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
P+MDG +LLE + E +P I+++ +GR + + + GA Y++KP + E L+ I +
Sbjct: 60 PEMDGLQLLEALQNEGRVPKCFILVTTEGRKEKLRQALAFGARGYVLKPFQPEGLRKILK 119
Query: 148 HVVRKRWNENKEHENSG 164
V + + EH G
Sbjct: 120 LFVGEPDEQELEHSPEG 136
>gi|357124552|ref|XP_003563963.1| PREDICTED: probable transcription factor GLK1-like [Brachypodium
distachyon]
Length = 474
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK +V W+ ELH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R
Sbjct: 188 KKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASH-----LQKYRS 242
Query: 279 YLKRL 283
+ K +
Sbjct: 243 HRKHM 247
>gi|331655705|ref|ZP_08356695.1| transcriptional regulatory protein ZraR [Escherichia coli M718]
gi|331046630|gb|EGI18717.1| transcriptional regulatory protein ZraR [Escherichia coli M718]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|193067813|ref|ZP_03048779.1| response regulator ZraR [Escherichia coli E110019]
gi|419948577|ref|ZP_14464868.1| transcriptional regulatory protein ZraR [Escherichia coli CUMT8]
gi|432677184|ref|ZP_19912621.1| transcriptional regulatory protein zraR [Escherichia coli KTE142]
gi|432965770|ref|ZP_20154690.1| transcriptional regulatory protein zraR [Escherichia coli KTE203]
gi|192958788|gb|EDV89225.1| response regulator ZraR [Escherichia coli E110019]
gi|388421071|gb|EIL80698.1| transcriptional regulatory protein ZraR [Escherichia coli CUMT8]
gi|431209282|gb|ELF07391.1| transcriptional regulatory protein zraR [Escherichia coli KTE142]
gi|431475131|gb|ELH54935.1| transcriptional regulatory protein zraR [Escherichia coli KTE203]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|417714445|ref|ZP_12363399.1| transcriptional regulatory protein zraR [Shigella flexneri K-272]
gi|417719313|ref|ZP_12368199.1| transcriptional regulatory protein zraR [Shigella flexneri K-227]
gi|332998847|gb|EGK18442.1| transcriptional regulatory protein zraR [Shigella flexneri K-272]
gi|333014307|gb|EGK33661.1| transcriptional regulatory protein zraR [Shigella flexneri K-227]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|416344123|ref|ZP_11678023.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli EC4100B]
gi|320200155|gb|EFW74744.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli EC4100B]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|297800266|ref|XP_002868017.1| pseudo-response regulator 2 [Arabidopsis lyrata subsp. lyrata]
gi|297313853|gb|EFH44276.1| pseudo-response regulator 2 [Arabidopsis lyrata subsp. lyrata]
Length = 533
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 21 AADVAVPDQFPAGLRVLVV------DDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR 74
A D++ + FP GL+VL++ D D + L Y VTT + AL +
Sbjct: 5 ANDLSKWENFPKGLKVLLLLHGGDSDRDGSSAAETRSKLESMDYIVTTFTDETEALSAVV 64
Query: 75 ERKGCFDVVLSDVHM-PDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYL 133
+ + F V + +V+ + + FK LE G + LP IM+S D ++ M+ I GA ++L
Sbjct: 65 KNRESFHVAIVEVNTRAENESFKFLE--GAKDVLPTIMISTDHCITTTMKCIALGAVEFL 122
Query: 134 IKPIREEELKNIWQHVVRKRWNE 156
KP+ E+LKNIWQHVV K +N+
Sbjct: 123 QKPLSPEKLKNIWQHVVHKAFND 145
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 5/66 (7%)
Query: 218 TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 277
T + +V W+ ELH++FV AV QLG+D+A+P RILELM V LTR NVASH LQKFR
Sbjct: 292 TSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASH-----LQKFR 346
Query: 278 LYLKRL 283
+ K +
Sbjct: 347 QHRKNI 352
>gi|193066408|ref|ZP_03047455.1| response regulator ZraR [Escherichia coli E22]
gi|194429958|ref|ZP_03062467.1| response regulator ZraR [Escherichia coli B171]
gi|218556559|ref|YP_002389473.1| transcriptional regulatory protein ZraR [Escherichia coli IAI1]
gi|260846804|ref|YP_003224582.1| fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O103:H2 str.
12009]
gi|293474312|ref|ZP_06664721.1| two-component system [Escherichia coli B088]
gi|300819816|ref|ZP_07100003.1| response regulator receiver domain protein [Escherichia coli MS
107-1]
gi|415799291|ref|ZP_11498768.1| transcriptional regulatory protein zraR [Escherichia coli E128010]
gi|415881471|ref|ZP_11545432.1| transcriptional regulatory protein ZraR [Escherichia coli MS 79-10]
gi|417133877|ref|ZP_11978662.1| transcriptional regulator ZraR [Escherichia coli 5.0588]
gi|417157480|ref|ZP_11995104.1| transcriptional regulator ZraR [Escherichia coli 96.0497]
gi|417176467|ref|ZP_12006263.1| transcriptional regulator ZraR [Escherichia coli 3.2608]
gi|417187279|ref|ZP_12012136.1| transcriptional regulator ZraR [Escherichia coli 93.0624]
gi|417223317|ref|ZP_12026757.1| transcriptional regulator ZraR [Escherichia coli 96.154]
gi|417249833|ref|ZP_12041617.1| transcriptional regulator ZraR [Escherichia coli 4.0967]
gi|417583669|ref|ZP_12234464.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_B2F1]
gi|417604923|ref|ZP_12255482.1| transcriptional regulatory protein zraR [Escherichia coli STEC_94C]
gi|417626193|ref|ZP_12276478.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_H.1.8]
gi|417669606|ref|ZP_12319138.1| transcriptional regulatory protein zraR [Escherichia coli STEC_O31]
gi|419280797|ref|ZP_13823031.1| response regulator [Escherichia coli DEC10E]
gi|419292232|ref|ZP_13834311.1| response regulator [Escherichia coli DEC11A]
gi|419297554|ref|ZP_13839585.1| response regulator [Escherichia coli DEC11B]
gi|419303049|ref|ZP_13845036.1| transcriptional regulatory protein zraR [Escherichia coli DEC11C]
gi|419309091|ref|ZP_13850976.1| transcriptional regulatory protein zraR [Escherichia coli DEC11D]
gi|419314052|ref|ZP_13855905.1| transcriptional regulatory protein zraR [Escherichia coli DEC11E]
gi|419319515|ref|ZP_13861306.1| transcriptional regulatory protein zraR [Escherichia coli DEC12A]
gi|419325779|ref|ZP_13867459.1| response regulator [Escherichia coli DEC12B]
gi|419331728|ref|ZP_13873315.1| transcriptional regulatory protein zraR [Escherichia coli DEC12C]
gi|419337215|ref|ZP_13878720.1| response regulator [Escherichia coli DEC12D]
gi|419342606|ref|ZP_13884054.1| response regulator [Escherichia coli DEC12E]
gi|419347838|ref|ZP_13889200.1| response regulator [Escherichia coli DEC13A]
gi|419352300|ref|ZP_13893622.1| response regulator [Escherichia coli DEC13B]
gi|419357785|ref|ZP_13899025.1| response regulator [Escherichia coli DEC13C]
gi|419362747|ref|ZP_13903948.1| response regulator [Escherichia coli DEC13D]
gi|419367838|ref|ZP_13908979.1| response regulator [Escherichia coli DEC13E]
gi|419378199|ref|ZP_13919209.1| response regulator [Escherichia coli DEC14B]
gi|419383590|ref|ZP_13924524.1| response regulator [Escherichia coli DEC14C]
gi|419388841|ref|ZP_13929697.1| response regulator [Escherichia coli DEC14D]
gi|419872051|ref|ZP_14394096.1| transcriptional regulatory protein ZraR [Escherichia coli O103:H2
str. CVM9450]
gi|420394156|ref|ZP_14893394.1| response regulator [Escherichia coli EPEC C342-62]
gi|422778774|ref|ZP_16832418.1| sigma-54 interaction domain-containing protein [Escherichia coli
H120]
gi|432808249|ref|ZP_20042160.1| transcriptional regulatory protein zraR [Escherichia coli KTE91]
gi|432811751|ref|ZP_20045604.1| transcriptional regulatory protein zraR [Escherichia coli KTE101]
gi|432829618|ref|ZP_20063231.1| transcriptional regulatory protein zraR [Escherichia coli KTE135]
gi|432931800|ref|ZP_20131779.1| transcriptional regulatory protein zraR [Escherichia coli KTE184]
gi|433196067|ref|ZP_20380025.1| transcriptional regulatory protein zraR [Escherichia coli KTE90]
gi|192925932|gb|EDV80579.1| response regulator ZraR [Escherichia coli E22]
gi|194411987|gb|EDX28300.1| response regulator ZraR [Escherichia coli B171]
gi|218363328|emb|CAR00978.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia coli IAI1]
gi|257761951|dbj|BAI33448.1| fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O103:H2 str.
12009]
gi|291321342|gb|EFE60783.1| two-component system [Escherichia coli B088]
gi|300527637|gb|EFK48699.1| response regulator receiver domain protein [Escherichia coli MS
107-1]
gi|323161303|gb|EFZ47212.1| transcriptional regulatory protein zraR [Escherichia coli E128010]
gi|323943607|gb|EGB39715.1| sigma-54 interaction domain-containing protein [Escherichia coli
H120]
gi|342926138|gb|EGU94860.1| transcriptional regulatory protein ZraR [Escherichia coli MS 79-10]
gi|345332772|gb|EGW65227.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_B2F1]
gi|345346623|gb|EGW78946.1| transcriptional regulatory protein zraR [Escherichia coli STEC_94C]
gi|345370799|gb|EGX02774.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_H.1.8]
gi|378122887|gb|EHW84313.1| response regulator [Escherichia coli DEC10E]
gi|378124056|gb|EHW85470.1| response regulator [Escherichia coli DEC11A]
gi|378137790|gb|EHW99058.1| response regulator [Escherichia coli DEC11B]
gi|378143652|gb|EHX04842.1| transcriptional regulatory protein zraR [Escherichia coli DEC11D]
gi|378145422|gb|EHX06587.1| transcriptional regulatory protein zraR [Escherichia coli DEC11C]
gi|378153931|gb|EHX15009.1| transcriptional regulatory protein zraR [Escherichia coli DEC11E]
gi|378160716|gb|EHX21707.1| response regulator [Escherichia coli DEC12B]
gi|378163998|gb|EHX24948.1| transcriptional regulatory protein zraR [Escherichia coli DEC12A]
gi|378164495|gb|EHX25439.1| transcriptional regulatory protein zraR [Escherichia coli DEC12C]
gi|378178628|gb|EHX39391.1| response regulator [Escherichia coli DEC12D]
gi|378181768|gb|EHX42432.1| response regulator [Escherichia coli DEC13A]
gi|378181807|gb|EHX42469.1| response regulator [Escherichia coli DEC12E]
gi|378194855|gb|EHX55364.1| response regulator [Escherichia coli DEC13C]
gi|378195107|gb|EHX55612.1| response regulator [Escherichia coli DEC13B]
gi|378197327|gb|EHX57809.1| response regulator [Escherichia coli DEC13D]
gi|378207958|gb|EHX68344.1| response regulator [Escherichia coli DEC13E]
gi|378213482|gb|EHX73795.1| response regulator [Escherichia coli DEC14B]
gi|378223486|gb|EHX83708.1| response regulator [Escherichia coli DEC14C]
gi|378226223|gb|EHX86412.1| response regulator [Escherichia coli DEC14D]
gi|386151731|gb|EIH03020.1| transcriptional regulator ZraR [Escherichia coli 5.0588]
gi|386166230|gb|EIH32750.1| transcriptional regulator ZraR [Escherichia coli 96.0497]
gi|386179159|gb|EIH56638.1| transcriptional regulator ZraR [Escherichia coli 3.2608]
gi|386181770|gb|EIH64531.1| transcriptional regulator ZraR [Escherichia coli 93.0624]
gi|386203119|gb|EII02110.1| transcriptional regulator ZraR [Escherichia coli 96.154]
gi|386220154|gb|EII36618.1| transcriptional regulator ZraR [Escherichia coli 4.0967]
gi|388335665|gb|EIL02222.1| transcriptional regulatory protein ZraR [Escherichia coli O103:H2
str. CVM9450]
gi|391309004|gb|EIQ66689.1| response regulator [Escherichia coli EPEC C342-62]
gi|397782847|gb|EJK93713.1| transcriptional regulatory protein zraR [Escherichia coli STEC_O31]
gi|431352418|gb|ELG39196.1| transcriptional regulatory protein zraR [Escherichia coli KTE91]
gi|431358826|gb|ELG45472.1| transcriptional regulatory protein zraR [Escherichia coli KTE101]
gi|431381931|gb|ELG66282.1| transcriptional regulatory protein zraR [Escherichia coli KTE135]
gi|431458986|gb|ELH39305.1| transcriptional regulatory protein zraR [Escherichia coli KTE184]
gi|431712408|gb|ELJ76704.1| transcriptional regulatory protein zraR [Escherichia coli KTE90]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|419372651|ref|ZP_13913751.1| transcriptional regulatory protein zraR [Escherichia coli DEC14A]
gi|378211784|gb|EHX72118.1| transcriptional regulatory protein zraR [Escherichia coli DEC14A]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|293417506|ref|ZP_06660129.1| two-component system [Escherichia coli B185]
gi|417631493|ref|ZP_12281722.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_MHI813]
gi|422836700|ref|ZP_16884739.1| transcriptional regulatory protein zraR [Escherichia coli E101]
gi|432452277|ref|ZP_19694528.1| transcriptional regulatory protein zraR [Escherichia coli KTE193]
gi|432943798|ref|ZP_20140529.1| transcriptional regulatory protein zraR [Escherichia coli KTE196]
gi|433035942|ref|ZP_20223622.1| transcriptional regulatory protein zraR [Escherichia coli KTE112]
gi|433045541|ref|ZP_20233008.1| transcriptional regulatory protein zraR [Escherichia coli KTE117]
gi|291430833|gb|EFF03830.1| two-component system [Escherichia coli B185]
gi|345368897|gb|EGX00889.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_MHI813]
gi|371607555|gb|EHN96125.1| transcriptional regulatory protein zraR [Escherichia coli E101]
gi|430976435|gb|ELC93301.1| transcriptional regulatory protein zraR [Escherichia coli KTE193]
gi|431466309|gb|ELH46385.1| transcriptional regulatory protein zraR [Escherichia coli KTE196]
gi|431545179|gb|ELI19847.1| transcriptional regulatory protein zraR [Escherichia coli KTE112]
gi|431551590|gb|ELI25575.1| transcriptional regulatory protein zraR [Escherichia coli KTE117]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|20807567|ref|NP_622738.1| chemotaxis protein CheY [Thermoanaerobacter tengcongensis MB4]
gi|20516103|gb|AAM24342.1| CheY-like receiver domains [Thermoanaerobacter tengcongensis MB4]
Length = 267
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDD + +++ +L YNV + + A+ ++ RK FD+++ D+++PD +GF
Sbjct: 10 ILVVDDSVLIRLMVKDILGGEGYNVVAAATSEEAVRKIKSRKELFDLIIVDINLPDQNGF 69
Query: 96 KLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
+ + ++ E +PVI++S D V ++ R + GA DYL+KP + EEL
Sbjct: 70 EFIRNLKSEEKYRHIPVIILSIDATVPSIKRAVEAGAVDYLVKPFKAEEL 119
>gi|432619317|ref|ZP_19855413.1| transcriptional regulatory protein zraR [Escherichia coli KTE75]
gi|431150249|gb|ELE51306.1| transcriptional regulatory protein zraR [Escherichia coli KTE75]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|308272553|emb|CBX29157.1| Acetoacetate metabolism regulatory protein atoC [uncultured
Desulfobacterium sp.]
Length = 445
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+LV+DDD+ +L++ L R Y+V C+ A AL + +++++SD+ MP+ DG
Sbjct: 8 RILVIDDDLVACEVLQETLIRAQYDVDICTSAKEALG---KDLSSYNLLISDIRMPEADG 64
Query: 95 FKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK 143
LL + + +LPVIM++A G + M +R GA DY+ KP E ++
Sbjct: 65 LNLLHQVQKQWPELPVIMVTAYGSLETTMESLRLGASDYISKPFSPEAIR 114
>gi|331670859|ref|ZP_08371694.1| transcriptional regulatory protein ZraR [Escherichia coli TA271]
gi|417269680|ref|ZP_12057040.1| transcriptional regulator ZraR [Escherichia coli 3.3884]
gi|423708316|ref|ZP_17682696.1| transcriptional regulatory protein zraR [Escherichia coli B799]
gi|432379243|ref|ZP_19622221.1| transcriptional regulatory protein zraR [Escherichia coli KTE12]
gi|432837058|ref|ZP_20070564.1| transcriptional regulatory protein zraR [Escherichia coli KTE136]
gi|331061947|gb|EGI33871.1| transcriptional regulatory protein ZraR [Escherichia coli TA271]
gi|385708544|gb|EIG45554.1| transcriptional regulatory protein zraR [Escherichia coli B799]
gi|386228485|gb|EII55841.1| transcriptional regulator ZraR [Escherichia coli 3.3884]
gi|430895085|gb|ELC17358.1| transcriptional regulatory protein zraR [Escherichia coli KTE12]
gi|431379932|gb|ELG64836.1| transcriptional regulatory protein zraR [Escherichia coli KTE136]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|110807854|ref|YP_691374.1| transcriptional regulatory protein ZraR [Shigella flexneri 5 str.
8401]
gi|424840226|ref|ZP_18264863.1| transcriptional regulatory protein ZraR [Shigella flexneri 5a str.
M90T]
gi|110617402|gb|ABF06069.1| Transcriptional Regulatory protein [Shigella flexneri 5 str. 8401]
gi|383469278|gb|EID64299.1| transcriptional regulatory protein ZraR [Shigella flexneri 5a str.
M90T]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|157157738|ref|YP_001465500.1| transcriptional regulatory protein ZraR [Escherichia coli E24377A]
gi|300925874|ref|ZP_07141717.1| response regulator receiver domain protein [Escherichia coli MS
182-1]
gi|301325713|ref|ZP_07219172.1| response regulator receiver domain protein [Escherichia coli MS
78-1]
gi|450229170|ref|ZP_21897723.1| transcriptional regulatory protein ZraR [Escherichia coli O08]
gi|157079768|gb|ABV19476.1| response regulator ZraR [Escherichia coli E24377A]
gi|300418064|gb|EFK01375.1| response regulator receiver domain protein [Escherichia coli MS
182-1]
gi|300847502|gb|EFK75262.1| response regulator receiver domain protein [Escherichia coli MS
78-1]
gi|449313114|gb|EMD03340.1| transcriptional regulatory protein ZraR [Escherichia coli O08]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|170680150|ref|YP_001746389.1| transcriptional regulatory protein ZraR [Escherichia coli SMS-3-5]
gi|170517868|gb|ACB16046.1| response regulator ZraR [Escherichia coli SMS-3-5]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|432871964|ref|ZP_20091923.1| transcriptional regulatory protein zraR [Escherichia coli KTE147]
gi|431407265|gb|ELG90482.1| transcriptional regulatory protein zraR [Escherichia coli KTE147]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|422831761|ref|ZP_16879897.1| transcriptional regulatory protein zraR [Escherichia coli B093]
gi|371616166|gb|EHO04534.1| transcriptional regulatory protein zraR [Escherichia coli B093]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|293413440|ref|ZP_06656100.1| transcriptional regulatory protein ZraR [Escherichia coli B354]
gi|424818244|ref|ZP_18243395.1| transcriptional regulatory protein ZraR [Escherichia fergusonii
ECD227]
gi|291468035|gb|EFF10534.1| transcriptional regulatory protein ZraR [Escherichia coli B354]
gi|325499264|gb|EGC97123.1| transcriptional regulatory protein ZraR [Escherichia fergusonii
ECD227]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|215489336|ref|YP_002331767.1| transcriptional regulatory protein ZraR [Escherichia coli O127:H6
str. E2348/69]
gi|312965342|ref|ZP_07779575.1| transcriptional regulatory protein zraR [Escherichia coli 2362-75]
gi|415838217|ref|ZP_11520200.1| transcriptional regulatory protein zraR [Escherichia coli RN587/1]
gi|417281801|ref|ZP_12069101.1| transcriptional regulator ZraR [Escherichia coli 3003]
gi|417758460|ref|ZP_12406517.1| response regulator [Escherichia coli DEC2B]
gi|418999510|ref|ZP_13547082.1| response regulator [Escherichia coli DEC1A]
gi|419004839|ref|ZP_13552343.1| response regulator [Escherichia coli DEC1B]
gi|419010524|ref|ZP_13557927.1| response regulator [Escherichia coli DEC1C]
gi|419016225|ref|ZP_13563556.1| transcriptional regulatory protein zraR [Escherichia coli DEC1D]
gi|419021152|ref|ZP_13568445.1| response regulator [Escherichia coli DEC1E]
gi|419026605|ref|ZP_13573813.1| transcriptional regulatory protein zraR [Escherichia coli DEC2A]
gi|419031776|ref|ZP_13578910.1| response regulator [Escherichia coli DEC2C]
gi|419037351|ref|ZP_13584418.1| response regulator [Escherichia coli DEC2D]
gi|419042457|ref|ZP_13589468.1| response regulator [Escherichia coli DEC2E]
gi|425280458|ref|ZP_18671667.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
ARS4.2123]
gi|425302921|ref|ZP_18692795.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
07798]
gi|215267408|emb|CAS11859.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O127:H6 str.
E2348/69]
gi|312290016|gb|EFR17903.1| transcriptional regulatory protein zraR [Escherichia coli 2362-75]
gi|323190138|gb|EFZ75416.1| transcriptional regulatory protein zraR [Escherichia coli RN587/1]
gi|377838459|gb|EHU03577.1| response regulator [Escherichia coli DEC1C]
gi|377838485|gb|EHU03602.1| response regulator [Escherichia coli DEC1A]
gi|377840946|gb|EHU06015.1| response regulator [Escherichia coli DEC1B]
gi|377852391|gb|EHU17315.1| transcriptional regulatory protein zraR [Escherichia coli DEC1D]
gi|377855596|gb|EHU20465.1| response regulator [Escherichia coli DEC1E]
gi|377857003|gb|EHU21859.1| transcriptional regulatory protein zraR [Escherichia coli DEC2A]
gi|377869923|gb|EHU34624.1| response regulator [Escherichia coli DEC2B]
gi|377871540|gb|EHU36202.1| response regulator [Escherichia coli DEC2C]
gi|377873102|gb|EHU37741.1| response regulator [Escherichia coli DEC2D]
gi|377885205|gb|EHU49705.1| response regulator [Escherichia coli DEC2E]
gi|386246130|gb|EII87860.1| transcriptional regulator ZraR [Escherichia coli 3003]
gi|408196991|gb|EKI22263.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
ARS4.2123]
gi|408209863|gb|EKI34443.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
07798]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|209921484|ref|YP_002295568.1| transcriptional regulatory protein ZraR [Escherichia coli SE11]
gi|422354680|ref|ZP_16435407.1| response regulator receiver domain protein [Escherichia coli MS
117-3]
gi|433094404|ref|ZP_20280647.1| transcriptional regulatory protein zraR [Escherichia coli KTE138]
gi|209914743|dbj|BAG79817.1| two-component regulator [Escherichia coli SE11]
gi|324017342|gb|EGB86561.1| response regulator receiver domain protein [Escherichia coli MS
117-3]
gi|431605934|gb|ELI75319.1| transcriptional regulatory protein zraR [Escherichia coli KTE138]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|386620951|ref|YP_006140531.1| Transcriptional regulatory protein ZraR [Escherichia coli NA114]
gi|387831911|ref|YP_003351848.1| two-component regulator [Escherichia coli SE15]
gi|432424419|ref|ZP_19666952.1| transcriptional regulatory protein zraR [Escherichia coli KTE178]
gi|432502579|ref|ZP_19744325.1| transcriptional regulatory protein zraR [Escherichia coli KTE216]
gi|432561325|ref|ZP_19797974.1| transcriptional regulatory protein zraR [Escherichia coli KTE49]
gi|432696887|ref|ZP_19932075.1| transcriptional regulatory protein zraR [Escherichia coli KTE162]
gi|432708408|ref|ZP_19943481.1| transcriptional regulatory protein zraR [Escherichia coli KTE6]
gi|432923310|ref|ZP_20125996.1| transcriptional regulatory protein zraR [Escherichia coli KTE173]
gi|432923443|ref|ZP_20126026.1| transcriptional regulatory protein zraR [Escherichia coli KTE175]
gi|432983549|ref|ZP_20172295.1| transcriptional regulatory protein zraR [Escherichia coli KTE211]
gi|433098857|ref|ZP_20285016.1| transcriptional regulatory protein zraR [Escherichia coli KTE139]
gi|433108287|ref|ZP_20294239.1| transcriptional regulatory protein zraR [Escherichia coli KTE148]
gi|281181068|dbj|BAI57398.1| two-component regulator [Escherichia coli SE15]
gi|333971452|gb|AEG38257.1| Transcriptional regulatory protein ZraR [Escherichia coli NA114]
gi|430940965|gb|ELC61125.1| transcriptional regulatory protein zraR [Escherichia coli KTE178]
gi|431025381|gb|ELD38489.1| transcriptional regulatory protein zraR [Escherichia coli KTE216]
gi|431088048|gb|ELD93958.1| transcriptional regulatory protein zraR [Escherichia coli KTE49]
gi|431229615|gb|ELF26254.1| transcriptional regulatory protein zraR [Escherichia coli KTE162]
gi|431254336|gb|ELF47611.1| transcriptional regulatory protein zraR [Escherichia coli KTE6]
gi|431433801|gb|ELH15456.1| transcriptional regulatory protein zraR [Escherichia coli KTE173]
gi|431451910|gb|ELH32366.1| transcriptional regulatory protein zraR [Escherichia coli KTE175]
gi|431486655|gb|ELH66304.1| transcriptional regulatory protein zraR [Escherichia coli KTE211]
gi|431611659|gb|ELI80934.1| transcriptional regulatory protein zraR [Escherichia coli KTE139]
gi|431622957|gb|ELI91641.1| transcriptional regulatory protein zraR [Escherichia coli KTE148]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|187730825|ref|YP_001882690.1| transcriptional regulator ZraR [Shigella boydii CDC 3083-94]
gi|191168666|ref|ZP_03030447.1| response regulator ZraR [Escherichia coli B7A]
gi|300824615|ref|ZP_07104723.1| response regulator receiver domain protein [Escherichia coli MS
119-7]
gi|300907558|ref|ZP_07125196.1| response regulator receiver domain protein [Escherichia coli MS
84-1]
gi|301302183|ref|ZP_07208315.1| response regulator receiver domain protein [Escherichia coli MS
124-1]
gi|307315022|ref|ZP_07594608.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli W]
gi|309797709|ref|ZP_07692095.1| response regulator receiver domain protein [Escherichia coli MS
145-7]
gi|331680128|ref|ZP_08380789.1| transcriptional regulatory protein ZraR [Escherichia coli H591]
gi|378715045|ref|YP_005279938.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli KO11FL]
gi|386611413|ref|YP_006126899.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli W]
gi|386698973|ref|YP_006162810.1| transcriptional regulatory protein ZraR [Escherichia coli KO11FL]
gi|386711953|ref|YP_006175674.1| transcriptional regulatory protein ZraR [Escherichia coli W]
gi|415810149|ref|ZP_11502654.1| transcriptional regulatory protein zraR [Escherichia coli LT-68]
gi|415867887|ref|ZP_11539650.1| response regulator receiver domain protein [Escherichia coli MS
85-1]
gi|417127973|ref|ZP_11975314.1| transcriptional regulator ZraR [Escherichia coli 97.0246]
gi|417227837|ref|ZP_12029595.1| transcriptional regulator ZraR [Escherichia coli 5.0959]
gi|417642026|ref|ZP_12292148.1| transcriptional regulatory protein zraR [Escherichia coli TX1999]
gi|417705204|ref|ZP_12354281.1| transcriptional regulatory protein zraR [Shigella flexneri VA-6]
gi|417829753|ref|ZP_12476297.1| response regulator [Shigella flexneri J1713]
gi|418943675|ref|ZP_13496839.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H43
str. T22]
gi|419172975|ref|ZP_13716842.1| transcriptional regulatory protein zraR [Escherichia coli DEC7A]
gi|419177701|ref|ZP_13721503.1| response regulator [Escherichia coli DEC7B]
gi|419183539|ref|ZP_13727135.1| response regulator [Escherichia coli DEC7C]
gi|419189153|ref|ZP_13732651.1| response regulator [Escherichia coli DEC7D]
gi|419194282|ref|ZP_13737717.1| transcriptional regulatory protein zraR [Escherichia coli DEC7E]
gi|419866639|ref|ZP_14388992.1| transcriptional regulatory protein ZraR [Escherichia coli O103:H25
str. CVM9340]
gi|419923289|ref|ZP_14441248.1| transcriptional regulatory protein ZraR [Escherichia coli 541-15]
gi|420333242|ref|ZP_14834885.1| transcriptional regulatory protein zraR [Shigella flexneri K-1770]
gi|420388373|ref|ZP_14887700.1| transcriptional regulatory protein zraR [Escherichia coli EPECa12]
gi|433137258|ref|ZP_20322576.1| transcriptional regulatory protein zraR [Escherichia coli KTE166]
gi|187427817|gb|ACD07091.1| response regulator ZraR [Shigella boydii CDC 3083-94]
gi|190901306|gb|EDV61074.1| response regulator ZraR [Escherichia coli B7A]
gi|300400725|gb|EFJ84263.1| response regulator receiver domain protein [Escherichia coli MS
84-1]
gi|300522864|gb|EFK43933.1| response regulator receiver domain protein [Escherichia coli MS
119-7]
gi|300842346|gb|EFK70106.1| response regulator receiver domain protein [Escherichia coli MS
124-1]
gi|306905527|gb|EFN36060.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli W]
gi|308118721|gb|EFO55983.1| response regulator receiver domain protein [Escherichia coli MS
145-7]
gi|315063330|gb|ADT77657.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli W]
gi|315252727|gb|EFU32695.1| response regulator receiver domain protein [Escherichia coli MS
85-1]
gi|323174483|gb|EFZ60108.1| transcriptional regulatory protein zraR [Escherichia coli LT-68]
gi|323380606|gb|ADX52874.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli KO11FL]
gi|331072283|gb|EGI43617.1| transcriptional regulatory protein ZraR [Escherichia coli H591]
gi|333010738|gb|EGK30166.1| transcriptional regulatory protein zraR [Shigella flexneri VA-6]
gi|335573699|gb|EGM60041.1| response regulator [Shigella flexneri J1713]
gi|345389543|gb|EGX19348.1| transcriptional regulatory protein zraR [Escherichia coli TX1999]
gi|375321018|gb|EHS66899.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H43
str. T22]
gi|378009652|gb|EHV72607.1| transcriptional regulatory protein zraR [Escherichia coli DEC7A]
gi|378020735|gb|EHV83474.1| response regulator [Escherichia coli DEC7C]
gi|378023072|gb|EHV85751.1| response regulator [Escherichia coli DEC7D]
gi|378027622|gb|EHV90249.1| response regulator [Escherichia coli DEC7B]
gi|378033853|gb|EHV96424.1| transcriptional regulatory protein zraR [Escherichia coli DEC7E]
gi|383390500|gb|AFH15458.1| transcriptional regulatory protein ZraR [Escherichia coli KO11FL]
gi|383407645|gb|AFH13888.1| transcriptional regulatory protein ZraR [Escherichia coli W]
gi|386143933|gb|EIG90401.1| transcriptional regulator ZraR [Escherichia coli 97.0246]
gi|386207172|gb|EII11677.1| transcriptional regulator ZraR [Escherichia coli 5.0959]
gi|388334346|gb|EIL00942.1| transcriptional regulatory protein ZraR [Escherichia coli O103:H25
str. CVM9340]
gi|388394130|gb|EIL55445.1| transcriptional regulatory protein ZraR [Escherichia coli 541-15]
gi|391247154|gb|EIQ06408.1| transcriptional regulatory protein zraR [Shigella flexneri K-1770]
gi|391300816|gb|EIQ58720.1| transcriptional regulatory protein zraR [Escherichia coli EPECa12]
gi|431652765|gb|ELJ19895.1| transcriptional regulatory protein zraR [Escherichia coli KTE166]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|432604827|ref|ZP_19841051.1| transcriptional regulatory protein zraR [Escherichia coli KTE66]
gi|431135985|gb|ELE37858.1| transcriptional regulatory protein zraR [Escherichia coli KTE66]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|418040103|ref|ZP_12678354.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli W26]
gi|383476948|gb|EID68876.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli W26]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|331649858|ref|ZP_08350936.1| transcriptional regulatory protein ZraR [Escherichia coli M605]
gi|417664646|ref|ZP_12314225.1| response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli AA86]
gi|330908320|gb|EGH36839.1| response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli AA86]
gi|331041324|gb|EGI13476.1| transcriptional regulatory protein ZraR [Escherichia coli M605]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|218551012|ref|YP_002384803.1| transcriptional regulatory protein ZraR [Escherichia fergusonii
ATCC 35469]
gi|422808316|ref|ZP_16856740.1| sigma-54 interaction domain-containing protein [Escherichia
fergusonii B253]
gi|218358553|emb|CAQ91201.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia fergusonii ATCC 35469]
gi|324110916|gb|EGC04908.1| sigma-54 interaction domain-containing protein [Escherichia
fergusonii B253]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|432795266|ref|ZP_20029334.1| transcriptional regulatory protein zraR [Escherichia coli KTE78]
gi|432796775|ref|ZP_20030806.1| transcriptional regulatory protein zraR [Escherichia coli KTE79]
gi|431334674|gb|ELG21828.1| transcriptional regulatory protein zraR [Escherichia coli KTE78]
gi|431347404|gb|ELG34293.1| transcriptional regulatory protein zraR [Escherichia coli KTE79]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|422784709|ref|ZP_16837487.1| sigma-54 interaction domain-containing protein [Escherichia coli
TW10509]
gi|323974204|gb|EGB69336.1| sigma-54 interaction domain-containing protein [Escherichia coli
TW10509]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|416334277|ref|ZP_11671233.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli WV_060327]
gi|320197100|gb|EFW71718.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli WV_060327]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|157163473|ref|YP_001460791.1| transcriptional regulatory protein ZraR [Escherichia coli HS]
gi|417149104|ref|ZP_11989195.1| transcriptional regulator ZraR [Escherichia coli 1.2264]
gi|157069153|gb|ABV08408.1| response regulator ZraR [Escherichia coli HS]
gi|386161325|gb|EIH23128.1| transcriptional regulator ZraR [Escherichia coli 1.2264]
Length = 441
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|432857433|ref|ZP_20084336.1| transcriptional regulatory protein zraR [Escherichia coli KTE146]
gi|431410733|gb|ELG93886.1| transcriptional regulatory protein zraR [Escherichia coli KTE146]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|16131834|ref|NP_418432.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli str. K-12 substr. MG1655]
gi|170083465|ref|YP_001732785.1| transcriptional regulatory protein ZraR [Escherichia coli str. K-12
substr. DH10B]
gi|238903061|ref|YP_002928857.1| transcriptional regulatory protein ZraR [Escherichia coli BW2952]
gi|300947388|ref|ZP_07161581.1| response regulator receiver domain protein [Escherichia coli MS
116-1]
gi|300954764|ref|ZP_07167194.1| response regulator receiver domain protein [Escherichia coli MS
175-1]
gi|301023375|ref|ZP_07187165.1| response regulator receiver domain protein [Escherichia coli MS
196-1]
gi|301645739|ref|ZP_07245660.1| response regulator receiver domain protein [Escherichia coli MS
146-1]
gi|312974209|ref|ZP_07788379.1| transcriptional regulatory protein zraR [Escherichia coli 1827-70]
gi|331644741|ref|ZP_08345859.1| transcriptional regulatory protein ZraR [Escherichia coli H736]
gi|386283086|ref|ZP_10060721.1| transcriptional regulatory protein zraR [Escherichia sp. 4_1_40B]
gi|386597478|ref|YP_006093878.1| two component Fis family sigma54-specific transcriptional regulator
[Escherichia coli DH1]
gi|387623637|ref|YP_006131265.1| transcriptional regulatory protein ZraR [Escherichia coli DH1]
gi|388479264|ref|YP_491456.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS [Escherichia coli str. K-12 substr.
W3110]
gi|404377429|ref|ZP_10982561.1| transcriptional regulatory protein zraR [Escherichia sp. 1_1_43]
gi|415775720|ref|ZP_11487404.1| transcriptional regulatory protein zraR [Escherichia coli 3431]
gi|417261064|ref|ZP_12048557.1| transcriptional regulator ZraR [Escherichia coli 2.3916]
gi|417273767|ref|ZP_12061112.1| transcriptional regulator ZraR [Escherichia coli 2.4168]
gi|417279431|ref|ZP_12066740.1| transcriptional regulator ZraR [Escherichia coli 3.2303]
gi|417293749|ref|ZP_12081028.1| transcriptional regulator ZraR [Escherichia coli B41]
gi|417615666|ref|ZP_12266112.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_EH250]
gi|417620697|ref|ZP_12271093.1| transcriptional regulatory protein zraR [Escherichia coli G58-1]
gi|417636964|ref|ZP_12287166.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_S1191]
gi|417947113|ref|ZP_12590314.1| transcriptional regulatory protein ZraR [Escherichia coli XH140A]
gi|417978675|ref|ZP_12619435.1| transcriptional regulatory protein ZraR [Escherichia coli XH001]
gi|418305629|ref|ZP_12917423.1| transcriptional regulatory protein zraR [Escherichia coli UMNF18]
gi|418960115|ref|ZP_13512009.1| transcriptional regulatory protein zraR [Escherichia coli J53]
gi|419151001|ref|ZP_13695644.1| response regulator [Escherichia coli DEC6B]
gi|419156529|ref|ZP_13701080.1| transcriptional regulatory protein zraR [Escherichia coli DEC6C]
gi|419166973|ref|ZP_13711416.1| response regulator [Escherichia coli DEC6E]
gi|419813341|ref|ZP_14338191.1| transcriptional regulatory protein ZraR [Escherichia coli O32:H37
str. P4]
gi|419939932|ref|ZP_14456712.1| transcriptional regulatory protein ZraR [Escherichia coli 75]
gi|422769359|ref|ZP_16823078.1| sigma-54 interaction domain-containing protein [Escherichia coli
E1520]
gi|422773933|ref|ZP_16827613.1| sigma-54 interaction domain-containing protein [Escherichia coli
E482]
gi|423703554|ref|ZP_17677986.1| transcriptional regulatory protein zraR [Escherichia coli H730]
gi|425117634|ref|ZP_18519402.1| transcriptional regulatory protein zraR [Escherichia coli 8.0566]
gi|425122349|ref|ZP_18524014.1| transcriptional regulatory protein zraR [Escherichia coli 8.0569]
gi|425275344|ref|ZP_18666718.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW15901]
gi|425285899|ref|ZP_18676907.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW00353]
gi|425307832|ref|ZP_18697490.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
N1]
gi|432419523|ref|ZP_19662109.1| transcriptional regulatory protein zraR [Escherichia coli KTE44]
gi|432566379|ref|ZP_19802931.1| transcriptional regulatory protein zraR [Escherichia coli KTE51]
gi|432578275|ref|ZP_19814718.1| transcriptional regulatory protein zraR [Escherichia coli KTE56]
gi|432629619|ref|ZP_19865579.1| transcriptional regulatory protein zraR [Escherichia coli KTE77]
gi|432634899|ref|ZP_19870794.1| transcriptional regulatory protein zraR [Escherichia coli KTE81]
gi|432658846|ref|ZP_19894517.1| transcriptional regulatory protein zraR [Escherichia coli KTE111]
gi|432683478|ref|ZP_19918808.1| transcriptional regulatory protein zraR [Escherichia coli KTE156]
gi|432689325|ref|ZP_19924586.1| transcriptional regulatory protein zraR [Escherichia coli KTE161]
gi|432702171|ref|ZP_19937305.1| transcriptional regulatory protein zraR [Escherichia coli KTE171]
gi|432735049|ref|ZP_19969859.1| transcriptional regulatory protein zraR [Escherichia coli KTE42]
gi|432878477|ref|ZP_20095815.1| transcriptional regulatory protein zraR [Escherichia coli KTE154]
gi|432951414|ref|ZP_20144993.1| transcriptional regulatory protein zraR [Escherichia coli KTE197]
gi|433050476|ref|ZP_20237787.1| transcriptional regulatory protein zraR [Escherichia coli KTE120]
gi|442589915|ref|ZP_21008704.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|450253910|ref|ZP_21902473.1| transcriptional regulatory protein ZraR [Escherichia coli S17]
gi|417166|sp|P14375.2|ZRAR_ECOLI RecName: Full=Transcriptional regulatory protein ZraR
gi|396343|gb|AAC43102.1| ORF_o441 [Escherichia coli str. K-12 substr. MG1655]
gi|1790437|gb|AAC76978.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli str. K-12 substr. MG1655]
gi|85676065|dbj|BAE77315.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS [Escherichia coli str. K12 substr.
W3110]
gi|169891300|gb|ACB05007.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator; sigma54
interaction protein [Escherichia coli str. K-12 substr.
DH10B]
gi|226838496|gb|EEH70526.1| transcriptional regulatory protein zraR [Escherichia sp. 1_1_43]
gi|238861185|gb|ACR63183.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli BW2952]
gi|260451167|gb|ACX41589.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli DH1]
gi|299880895|gb|EFI89106.1| response regulator receiver domain protein [Escherichia coli MS
196-1]
gi|300318263|gb|EFJ68047.1| response regulator receiver domain protein [Escherichia coli MS
175-1]
gi|300452992|gb|EFK16612.1| response regulator receiver domain protein [Escherichia coli MS
116-1]
gi|301075988|gb|EFK90794.1| response regulator receiver domain protein [Escherichia coli MS
146-1]
gi|310331376|gb|EFP98641.1| transcriptional regulatory protein zraR [Escherichia coli 1827-70]
gi|315138561|dbj|BAJ45720.1| transcriptional regulatory protein ZraR [Escherichia coli DH1]
gi|315617369|gb|EFU97975.1| transcriptional regulatory protein zraR [Escherichia coli 3431]
gi|323933954|gb|EGB30428.1| sigma-54 interaction domain-containing protein [Escherichia coli
E1520]
gi|323938879|gb|EGB35099.1| sigma-54 interaction domain-containing protein [Escherichia coli
E482]
gi|331036041|gb|EGI08278.1| transcriptional regulatory protein ZraR [Escherichia coli H736]
gi|339417727|gb|AEJ59399.1| transcriptional regulatory protein zraR [Escherichia coli UMNF18]
gi|342361177|gb|EGU25323.1| transcriptional regulatory protein ZraR [Escherichia coli XH140A]
gi|344191700|gb|EGV45810.1| transcriptional regulatory protein ZraR [Escherichia coli XH001]
gi|345357379|gb|EGW89577.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_EH250]
gi|345368362|gb|EGX00360.1| transcriptional regulatory protein zraR [Escherichia coli G58-1]
gi|345384455|gb|EGX14319.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_S1191]
gi|359334118|dbj|BAL40565.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS [Escherichia coli str. K-12 substr.
MDS42]
gi|377987990|gb|EHV51172.1| response regulator [Escherichia coli DEC6B]
gi|377991145|gb|EHV54297.1| transcriptional regulatory protein zraR [Escherichia coli DEC6C]
gi|378005608|gb|EHV68609.1| response regulator [Escherichia coli DEC6E]
gi|384377085|gb|EIE34982.1| transcriptional regulatory protein zraR [Escherichia coli J53]
gi|385153821|gb|EIF15847.1| transcriptional regulatory protein ZraR [Escherichia coli O32:H37
str. P4]
gi|385707993|gb|EIG45013.1| transcriptional regulatory protein zraR [Escherichia coli H730]
gi|386119843|gb|EIG68485.1| transcriptional regulatory protein zraR [Escherichia sp. 4_1_40B]
gi|386225468|gb|EII47798.1| transcriptional regulator ZraR [Escherichia coli 2.3916]
gi|386233949|gb|EII65929.1| transcriptional regulator ZraR [Escherichia coli 2.4168]
gi|386237857|gb|EII74798.1| transcriptional regulator ZraR [Escherichia coli 3.2303]
gi|386251937|gb|EIJ01629.1| transcriptional regulator ZraR [Escherichia coli B41]
gi|388405888|gb|EIL66304.1| transcriptional regulatory protein ZraR [Escherichia coli 75]
gi|408189339|gb|EKI15078.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW15901]
gi|408197201|gb|EKI22467.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW00353]
gi|408224324|gb|EKI48041.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
N1]
gi|408562604|gb|EKK38763.1| transcriptional regulatory protein zraR [Escherichia coli 8.0566]
gi|408563814|gb|EKK39942.1| transcriptional regulatory protein zraR [Escherichia coli 8.0569]
gi|430935576|gb|ELC55886.1| transcriptional regulatory protein zraR [Escherichia coli KTE44]
gi|431088947|gb|ELD94775.1| transcriptional regulatory protein zraR [Escherichia coli KTE51]
gi|431111197|gb|ELE15111.1| transcriptional regulatory protein zraR [Escherichia coli KTE56]
gi|431159443|gb|ELE59996.1| transcriptional regulatory protein zraR [Escherichia coli KTE77]
gi|431175729|gb|ELE75728.1| transcriptional regulatory protein zraR [Escherichia coli KTE81]
gi|431205195|gb|ELF03699.1| transcriptional regulatory protein zraR [Escherichia coli KTE111]
gi|431226840|gb|ELF23995.1| transcriptional regulatory protein zraR [Escherichia coli KTE156]
gi|431233887|gb|ELF29469.1| transcriptional regulatory protein zraR [Escherichia coli KTE161]
gi|431248584|gb|ELF42777.1| transcriptional regulatory protein zraR [Escherichia coli KTE171]
gi|431289154|gb|ELF79896.1| transcriptional regulatory protein zraR [Escherichia coli KTE42]
gi|431416541|gb|ELG99019.1| transcriptional regulatory protein zraR [Escherichia coli KTE154]
gi|431476639|gb|ELH56428.1| transcriptional regulatory protein zraR [Escherichia coli KTE197]
gi|431560960|gb|ELI34464.1| transcriptional regulatory protein zraR [Escherichia coli KTE120]
gi|441609872|emb|CCP94617.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|449313686|gb|EMD03885.1| transcriptional regulatory protein ZraR [Escherichia coli S17]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|381149253|gb|AFF60409.1| golden 2-like 2 transcription factor [Solanum phureja]
Length = 317
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%)
Query: 214 DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINL 273
+P +K +V W+ ELH++FV A+ +LG+DKAVP RILELM+ GLTR N+ASHLQ+
Sbjct: 86 NPQGKRKVKVDWTPELHRKFVKAIEKLGVDKAVPSRILELMSTHGLTRHNIASHLQKYRA 145
Query: 274 QKFRLYLKRLNGVS 287
+ L + VS
Sbjct: 146 HRKHLLAREAEAVS 159
>gi|389579043|ref|ZP_10169070.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
gi|389400678|gb|EIM62900.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
Length = 471
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Query: 36 VLVVDDDITCLRILEQMLRRCL-YNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
+LVVDD+ R+L++ L L VT +AL+IL FD+V+SD+ MP MDG
Sbjct: 5 ILVVDDEKDMTRLLQRTLEPELNCRVTMAFSGEMALNILGLADTAFDLVISDIRMPGMDG 64
Query: 95 FKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
F LLE + + DL V+M++A G + + + GI+ GA D++ KP ++E+
Sbjct: 65 FDLLEQLKQKYPDLTVVMLTAYGNIESAVAGIKKGAYDFIAKPFEQDEI 113
>gi|419926576|ref|ZP_14444328.1| transcriptional regulatory protein ZraR [Escherichia coli 541-1]
gi|422764699|ref|ZP_16818444.1| sigma-54 interaction domain-containing protein [Escherichia coli
E1167]
gi|427807196|ref|ZP_18974263.1| response regulator of hydrogenase 3 activity (sensor HydH)
[Escherichia coli chi7122]
gi|427811795|ref|ZP_18978860.1| response regulator of hydrogenase 3 activity (sensor HydH)
[Escherichia coli]
gi|432752458|ref|ZP_19987033.1| transcriptional regulatory protein zraR [Escherichia coli KTE29]
gi|443615486|ref|YP_007379342.1| transcriptional regulatory protein ZraR [Escherichia coli APEC O78]
gi|324115436|gb|EGC09381.1| sigma-54 interaction domain-containing protein [Escherichia coli
E1167]
gi|388409222|gb|EIL69541.1| transcriptional regulatory protein ZraR [Escherichia coli 541-1]
gi|412965378|emb|CCK49311.1| response regulator of hydrogenase 3 activity (sensor HydH)
[Escherichia coli chi7122]
gi|412971974|emb|CCJ46644.1| response regulator of hydrogenase 3 activity (sensor HydH)
[Escherichia coli]
gi|431292726|gb|ELF83111.1| transcriptional regulatory protein zraR [Escherichia coli KTE29]
gi|443419994|gb|AGC84898.1| transcriptional regulatory protein ZraR [Escherichia coli APEC O78]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|419145119|ref|ZP_13689842.1| transcriptional regulatory protein zraR [Escherichia coli DEC6A]
gi|377988681|gb|EHV51858.1| transcriptional regulatory protein zraR [Escherichia coli DEC6A]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|87119489|ref|ZP_01075386.1| Helix-turn-helix, Fis-type protein [Marinomonas sp. MED121]
gi|86164965|gb|EAQ66233.1| Helix-turn-helix, Fis-type protein [Marinomonas sp. MED121]
Length = 448
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L+V+DD LE L Y+ A A+ LRE+ FD+V+SDV++P MDG+
Sbjct: 6 LLIVEDDKELAEALEDTLMLANYHCVLAYSAEDAVLALREQ--AFDMVVSDVNLPGMDGY 63
Query: 96 KLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEE-LKNIWQH 148
LL H+ + DLP+++M+A G ++ + +R GA DYL+KP + +E L I +H
Sbjct: 64 GLLSHVIEKYPDLPIMLMTAFGDIAHAVEAMREGAVDYLLKPFQADELLTTIAKH 118
>gi|74314498|ref|YP_312917.1| transcriptional regulatory protein ZraR [Shigella sonnei Ss046]
gi|383181306|ref|YP_005459311.1| transcriptional regulatory protein ZraR [Shigella sonnei 53G]
gi|414578887|ref|ZP_11436047.1| transcriptional regulatory protein zraR [Shigella sonnei 3233-85]
gi|415846650|ref|ZP_11525672.1| transcriptional regulatory protein zraR [Shigella sonnei 53G]
gi|418270315|ref|ZP_12888307.1| response regulator [Shigella sonnei str. Moseley]
gi|420356811|ref|ZP_14857834.1| transcriptional regulatory protein zraR [Shigella sonnei 3226-85]
gi|420366032|ref|ZP_14866887.1| response regulator [Shigella sonnei 4822-66]
gi|73857975|gb|AAZ90682.1| response regulator of hydrogenase 3 activity (sensor HydH)
[Shigella sonnei Ss046]
gi|323167475|gb|EFZ53183.1| transcriptional regulatory protein zraR [Shigella sonnei 53G]
gi|391280048|gb|EIQ38724.1| transcriptional regulatory protein zraR [Shigella sonnei 3233-85]
gi|391289970|gb|EIQ48452.1| transcriptional regulatory protein zraR [Shigella sonnei 3226-85]
gi|391291410|gb|EIQ49812.1| response regulator [Shigella sonnei 4822-66]
gi|397894638|gb|EJL11079.1| response regulator [Shigella sonnei str. Moseley]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|455644043|gb|EMF23157.1| transcriptional regulatory protein ZraR [Citrobacter freundii GTC
09479]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR Y V AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYEVALAYSGRAALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
L+ I L +PV++M+A V + ++ GA DYLIKP+ + L+ + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAVEALKTGALDYLIKPLDFDRLQETLEKAL 121
>gi|432395409|ref|ZP_19638205.1| transcriptional regulatory protein zraR [Escherichia coli KTE25]
gi|432409094|ref|ZP_19651793.1| transcriptional regulatory protein zraR [Escherichia coli KTE28]
gi|432721166|ref|ZP_19956100.1| transcriptional regulatory protein zraR [Escherichia coli KTE17]
gi|432730094|ref|ZP_19964964.1| transcriptional regulatory protein zraR [Escherichia coli KTE18]
gi|432743783|ref|ZP_19978495.1| transcriptional regulatory protein zraR [Escherichia coli KTE23]
gi|432988516|ref|ZP_20177192.1| transcriptional regulatory protein zraR [Escherichia coli KTE217]
gi|433113301|ref|ZP_20299141.1| transcriptional regulatory protein zraR [Escherichia coli KTE150]
gi|430919693|gb|ELC40614.1| transcriptional regulatory protein zraR [Escherichia coli KTE25]
gi|430925743|gb|ELC46348.1| transcriptional regulatory protein zraR [Escherichia coli KTE28]
gi|431269804|gb|ELF61106.1| transcriptional regulatory protein zraR [Escherichia coli KTE17]
gi|431270332|gb|ELF61501.1| transcriptional regulatory protein zraR [Escherichia coli KTE18]
gi|431280812|gb|ELF71727.1| transcriptional regulatory protein zraR [Escherichia coli KTE23]
gi|431501473|gb|ELH80454.1| transcriptional regulatory protein zraR [Escherichia coli KTE217]
gi|431623478|gb|ELI92148.1| transcriptional regulatory protein zraR [Escherichia coli KTE150]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|340001560|ref|YP_004732444.1| transcriptional regulator [Salmonella bongori NCTC 12419]
gi|339514922|emb|CCC32693.1| transcriptional regulatory protein [Salmonella bongori NCTC 12419]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 7/118 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDD++ IL+ +LR YNVT AL +RE+ FD++L DV M +MDG
Sbjct: 8 ILVVDDDVSHCTILQALLRGWGYNVTLAYSGRDALAQVREQ--VFDLILCDVRMAEMDGI 65
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI----REEELKNIWQH 148
L+ I L +P+++M+A V + ++ GA DYLIKP+ +E LKN H
Sbjct: 66 ATLKEIKLLNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDSLQETLKNALAH 123
>gi|256840897|ref|ZP_05546405.1| two-component system sensor histidine kinase [Parabacteroides sp.
D13]
gi|256738169|gb|EEU51495.1| two-component system sensor histidine kinase [Parabacteroides sp.
D13]
Length = 374
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+ + +VL+VDD T + +++ +L++ Y + TC AL I E+ +++L D+
Sbjct: 2 DKLASEYKVLIVDDVPTNVMLVQAILKKEGYTLLTCDSGTKALRIANEKHP--NLILLDI 59
Query: 88 HMPDMDGFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
MP+MDG+++L+H+ D+PVI+MSA + ++++G + GA +Y+ KP + EEL
Sbjct: 60 MMPEMDGYEVLQHLKSNPETTDIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQREEL 117
>gi|395230619|ref|ZP_10408922.1| transcriptional regulatory protein ZraR [Citrobacter sp. A1]
gi|424733329|ref|ZP_18161890.1| sensory kinase in two component regulatory system with [Citrobacter
sp. L17]
gi|394715703|gb|EJF21495.1| transcriptional regulatory protein ZraR [Citrobacter sp. A1]
gi|422892324|gb|EKU32186.1| sensory kinase in two component regulatory system with [Citrobacter
sp. L17]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR Y V AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYEVALAYSGRAALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
L+ I L +PV++M+A V + ++ GA DYLIKP+ + L+ + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAVEALKTGALDYLIKPLDFDRLQETLEKAL 121
>gi|148240584|ref|YP_001225971.1| two-component system response regulator [Synechococcus sp. WH 7803]
gi|147849123|emb|CAK24674.1| Two-component system response regulator [Synechococcus sp. WH 7803]
Length = 248
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 82/144 (56%), Gaps = 9/144 (6%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P +LVVDD+ + RILE L YNV T AL+ +E + D+V+ DV MP
Sbjct: 6 PTKETILVVDDEASIRRILETRLSMIGYNVVTACDGTEALECFQECEP--DLVVLDVMMP 63
Query: 91 DMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
+DG+ + + + E D+P++M++A G V+ + G+ GA DY+IKP +EL+ + V+
Sbjct: 64 KLDGYGVCQELRKESDVPIVMLTALGDVADRITGLELGADDYVIKPFSPKELEARIRCVL 123
Query: 151 RKRWNENKEHE----NSGSLEETD 170
R+ KEH N+G ++ +D
Sbjct: 124 RR---VEKEHAAGIPNTGLIKVSD 144
>gi|186685833|ref|YP_001869029.1| two component transcriptional regulator [Nostoc punctiforme PCC
73102]
gi|186468285|gb|ACC84086.1| two component transcriptional regulator, winged helix family
[Nostoc punctiforme PCC 73102]
Length = 242
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T AL+ R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KTEPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|416900679|ref|ZP_11929867.1| transcriptional regulatory protein zraR [Escherichia coli STEC_7v]
gi|417116913|ref|ZP_11967774.1| transcriptional regulator ZraR [Escherichia coli 1.2741]
gi|422803652|ref|ZP_16852136.1| sigma-54 interaction domain-containing protein [Escherichia coli
M863]
gi|323963777|gb|EGB59276.1| sigma-54 interaction domain-containing protein [Escherichia coli
M863]
gi|327250477|gb|EGE62187.1| transcriptional regulatory protein zraR [Escherichia coli STEC_7v]
gi|386139457|gb|EIG80612.1| transcriptional regulator ZraR [Escherichia coli 1.2741]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVVLANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|218707623|ref|YP_002415142.1| transcriptional regulatory protein ZraR [Escherichia coli UMN026]
gi|293407621|ref|ZP_06651539.1| transcriptional regulatory protein ZraR [Escherichia coli FVEC1412]
gi|298383369|ref|ZP_06992961.1| two-component system [Escherichia coli FVEC1302]
gi|300897581|ref|ZP_07115990.1| response regulator receiver domain protein [Escherichia coli MS
198-1]
gi|331665661|ref|ZP_08366557.1| transcriptional regulatory protein ZraR [Escherichia coli TA143]
gi|417589196|ref|ZP_12239955.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_C165-02]
gi|419931968|ref|ZP_14449338.1| transcriptional regulatory protein ZraR [Escherichia coli 576-1]
gi|422335720|ref|ZP_16416714.1| transcriptional regulatory protein zraR [Escherichia coli
4_1_47FAA]
gi|432356037|ref|ZP_19599295.1| transcriptional regulatory protein zraR [Escherichia coli KTE2]
gi|432404399|ref|ZP_19647139.1| transcriptional regulatory protein zraR [Escherichia coli KTE26]
gi|432428667|ref|ZP_19671143.1| transcriptional regulatory protein zraR [Escherichia coli KTE181]
gi|432463409|ref|ZP_19705537.1| transcriptional regulatory protein zraR [Escherichia coli KTE204]
gi|432478365|ref|ZP_19720347.1| transcriptional regulatory protein zraR [Escherichia coli KTE208]
gi|432491834|ref|ZP_19733689.1| transcriptional regulatory protein zraR [Escherichia coli KTE213]
gi|432520215|ref|ZP_19757391.1| transcriptional regulatory protein zraR [Escherichia coli KTE228]
gi|432540383|ref|ZP_19777271.1| transcriptional regulatory protein zraR [Escherichia coli KTE235]
gi|432633948|ref|ZP_19869862.1| transcriptional regulatory protein zraR [Escherichia coli KTE80]
gi|432643599|ref|ZP_19879417.1| transcriptional regulatory protein zraR [Escherichia coli KTE83]
gi|432663722|ref|ZP_19899329.1| transcriptional regulatory protein zraR [Escherichia coli KTE116]
gi|432772775|ref|ZP_20007084.1| transcriptional regulatory protein zraR [Escherichia coli KTE54]
gi|432817837|ref|ZP_20051565.1| transcriptional regulatory protein zraR [Escherichia coli KTE115]
gi|432837098|ref|ZP_20070599.1| transcriptional regulatory protein zraR [Escherichia coli KTE140]
gi|432882806|ref|ZP_20098470.1| transcriptional regulatory protein zraR [Escherichia coli KTE158]
gi|432915897|ref|ZP_20121064.1| transcriptional regulatory protein zraR [Escherichia coli KTE190]
gi|433021262|ref|ZP_20209331.1| transcriptional regulatory protein zraR [Escherichia coli KTE105]
gi|433055632|ref|ZP_20242778.1| transcriptional regulatory protein zraR [Escherichia coli KTE122]
gi|433070411|ref|ZP_20257166.1| transcriptional regulatory protein zraR [Escherichia coli KTE128]
gi|433161163|ref|ZP_20345970.1| transcriptional regulatory protein zraR [Escherichia coli KTE177]
gi|433180878|ref|ZP_20365243.1| transcriptional regulatory protein zraR [Escherichia coli KTE82]
gi|433205761|ref|ZP_20389496.1| transcriptional regulatory protein zraR [Escherichia coli KTE95]
gi|218434720|emb|CAR15652.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia coli UMN026]
gi|291425389|gb|EFE98429.1| transcriptional regulatory protein ZraR [Escherichia coli FVEC1412]
gi|298276248|gb|EFI17769.1| two-component system [Escherichia coli FVEC1302]
gi|300358657|gb|EFJ74527.1| response regulator receiver domain protein [Escherichia coli MS
198-1]
gi|331057179|gb|EGI29171.1| transcriptional regulatory protein ZraR [Escherichia coli TA143]
gi|345330576|gb|EGW63045.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_C165-02]
gi|373243283|gb|EHP62796.1| transcriptional regulatory protein zraR [Escherichia coli
4_1_47FAA]
gi|388419875|gb|EIL79581.1| transcriptional regulatory protein ZraR [Escherichia coli 576-1]
gi|430871699|gb|ELB95333.1| transcriptional regulatory protein zraR [Escherichia coli KTE2]
gi|430922159|gb|ELC42920.1| transcriptional regulatory protein zraR [Escherichia coli KTE26]
gi|430949838|gb|ELC69260.1| transcriptional regulatory protein zraR [Escherichia coli KTE181]
gi|430984865|gb|ELD01483.1| transcriptional regulatory protein zraR [Escherichia coli KTE204]
gi|431001272|gb|ELD16856.1| transcriptional regulatory protein zraR [Escherichia coli KTE208]
gi|431016443|gb|ELD29988.1| transcriptional regulatory protein zraR [Escherichia coli KTE213]
gi|431047123|gb|ELD57132.1| transcriptional regulatory protein zraR [Escherichia coli KTE228]
gi|431066166|gb|ELD74910.1| transcriptional regulatory protein zraR [Escherichia coli KTE235]
gi|431166576|gb|ELE66888.1| transcriptional regulatory protein zraR [Escherichia coli KTE80]
gi|431176599|gb|ELE76546.1| transcriptional regulatory protein zraR [Escherichia coli KTE83]
gi|431206057|gb|ELF04489.1| transcriptional regulatory protein zraR [Escherichia coli KTE116]
gi|431323197|gb|ELG10750.1| transcriptional regulatory protein zraR [Escherichia coli KTE54]
gi|431359445|gb|ELG46084.1| transcriptional regulatory protein zraR [Escherichia coli KTE115]
gi|431394165|gb|ELG77703.1| transcriptional regulatory protein zraR [Escherichia coli KTE140]
gi|431422938|gb|ELH05069.1| transcriptional regulatory protein zraR [Escherichia coli KTE158]
gi|431434249|gb|ELH15900.1| transcriptional regulatory protein zraR [Escherichia coli KTE190]
gi|431526021|gb|ELI02791.1| transcriptional regulatory protein zraR [Escherichia coli KTE105]
gi|431564592|gb|ELI37763.1| transcriptional regulatory protein zraR [Escherichia coli KTE122]
gi|431577807|gb|ELI50431.1| transcriptional regulatory protein zraR [Escherichia coli KTE128]
gi|431672509|gb|ELJ38751.1| transcriptional regulatory protein zraR [Escherichia coli KTE177]
gi|431697091|gb|ELJ62237.1| transcriptional regulatory protein zraR [Escherichia coli KTE82]
gi|431714876|gb|ELJ79051.1| transcriptional regulatory protein zraR [Escherichia coli KTE95]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|188996860|ref|YP_001931111.1| response regulator receiver protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931927|gb|ACD66557.1| response regulator receiver protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 130
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLY-NVTTCSQAAVALDILRERKGCFDVVLSDVH 88
FP R+L VDD T +I++ +L + Y N+ AL L++ K +D+VL D +
Sbjct: 3 FPVASRILTVDDMATMRKIIKSLLNQLGYTNIDEAENGKEALAKLKQSK--YDLVLLDWN 60
Query: 89 MPDMDGFKLLEHIGLEM---DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK-- 143
MP+MDG LL+ I + D+PVIM++A+ + V+ I+ GA +Y++KP E LK
Sbjct: 61 MPEMDGITLLQEIRKDTHLKDIPVIMVTAEAKKENVLIAIQSGANNYIVKPFTAETLKEK 120
Query: 144 --NIWQHV 149
+WQ +
Sbjct: 121 LEKVWQQI 128
>gi|428225836|ref|YP_007109933.1| winged helix family two component transcriptional regulator
[Geitlerinema sp. PCC 7407]
gi|427985737|gb|AFY66881.1| two component transcriptional regulator, winged helix family
[Geitlerinema sp. PCC 7407]
Length = 243
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + AL+ R D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFR--NTAPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|254414140|ref|ZP_05027907.1| response regulator receiver domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196178815|gb|EDX73812.1| response regulator receiver domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 245
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + AL+ R + D+V+ DV MP +DG
Sbjct: 10 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRTSEP--DLVVLDVMMPKLDG 67
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 68 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 125
>gi|432682791|ref|ZP_19918140.1| transcriptional regulatory protein zraR [Escherichia coli KTE143]
gi|431216507|gb|ELF14106.1| transcriptional regulatory protein zraR [Escherichia coli KTE143]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|331685747|ref|ZP_08386329.1| transcriptional regulatory protein ZraR [Escherichia coli H299]
gi|450196287|ref|ZP_21892815.1| transcriptional regulatory protein ZraR [Escherichia coli SEPT362]
gi|331077057|gb|EGI48273.1| transcriptional regulatory protein ZraR [Escherichia coli H299]
gi|449315670|gb|EMD05808.1| transcriptional regulatory protein ZraR [Escherichia coli SEPT362]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|434406928|ref|YP_007149813.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Cylindrospermum stagnale PCC 7417]
gi|428261183|gb|AFZ27133.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Cylindrospermum stagnale PCC 7417]
Length = 242
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T AL+ R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KTEPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|420322455|ref|ZP_14824276.1| transcriptional regulatory protein zraR [Shigella flexneri 2850-71]
gi|391245396|gb|EIQ04665.1| transcriptional regulatory protein zraR [Shigella flexneri 2850-71]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|320354561|ref|YP_004195900.1| Fis family two component sigma54 specific transcriptional regulator
[Desulfobulbus propionicus DSM 2032]
gi|320123063|gb|ADW18609.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobulbus propionicus DSM 2032]
Length = 460
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDD+++ L+ +L + Y V T + AL+ R K FD+V++D+ MP M G
Sbjct: 6 ILVVDDELSMREFLKILLEKEGYQVATAADGQAALE--RAEKTAFDLVITDIRMPGMSGL 63
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
LL + L+ D+ VIM++A + ++ GA DY+ KP +E+K + + V++KR
Sbjct: 64 DLLARLKQLQADIGVIMITAFASPDDAVTAMKSGAFDYITKPFNVDEIKTVIRAVLKKR 122
>gi|366157619|ref|ZP_09457481.1| transcriptional regulatory protein ZraR [Escherichia sp. TW09308]
gi|432374589|ref|ZP_19617618.1| transcriptional regulatory protein zraR [Escherichia coli KTE11]
gi|430893222|gb|ELC15558.1| transcriptional regulatory protein zraR [Escherichia coli KTE11]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|284929471|ref|YP_003421993.1| winged helix family two component transcriptional regulator
[cyanobacterium UCYN-A]
gi|284809915|gb|ADB95612.1| two component transcriptional regulator, winged helix family
[cyanobacterium UCYN-A]
Length = 243
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + AL+I + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEIFYD--SVPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|419161879|ref|ZP_13706366.1| transcriptional regulatory protein zraR [Escherichia coli DEC6D]
gi|378003342|gb|EHV66386.1| transcriptional regulatory protein zraR [Escherichia coli DEC6D]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--IFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|150007937|ref|YP_001302680.1| two-component hybrid sensor kinase/response regulator
[Parabacteroides distasonis ATCC 8503]
gi|255013375|ref|ZP_05285501.1| two-component hybrid sensor kinase/response regulator [Bacteroides
sp. 2_1_7]
gi|262381501|ref|ZP_06074639.1| two-component system sensor histidine kinase [Bacteroides sp.
2_1_33B]
gi|410103774|ref|ZP_11298695.1| hypothetical protein HMPREF0999_02467 [Parabacteroides sp. D25]
gi|423331562|ref|ZP_17309346.1| hypothetical protein HMPREF1075_01359 [Parabacteroides distasonis
CL03T12C09]
gi|149936361|gb|ABR43058.1| two-component system sensor histidine kinase, with a response
regulator receiver domain [Parabacteroides distasonis
ATCC 8503]
gi|262296678|gb|EEY84608.1| two-component system sensor histidine kinase [Bacteroides sp.
2_1_33B]
gi|409230132|gb|EKN23000.1| hypothetical protein HMPREF1075_01359 [Parabacteroides distasonis
CL03T12C09]
gi|409236503|gb|EKN29310.1| hypothetical protein HMPREF0999_02467 [Parabacteroides sp. D25]
Length = 374
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+ + +VL+VDD T + +++ +L++ Y + TC AL I E+ +++L D+
Sbjct: 2 DKLASEYKVLIVDDVPTNVMLVQAILKKEGYTLLTCDSGTKALRIANEKHP--NLILLDI 59
Query: 88 HMPDMDGFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
MP+MDG+++L+H+ D+PVI+MSA + ++++G + GA +Y+ KP + EEL
Sbjct: 60 MMPEMDGYEVLQHLKSNPETTDIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQREEL 117
>gi|443315643|ref|ZP_21045123.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
gi|442784737|gb|ELR94597.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
Length = 242
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + AL+ R D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFR--TAHPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|432891765|ref|ZP_20104329.1| transcriptional regulatory protein zraR [Escherichia coli KTE165]
gi|431428992|gb|ELH10924.1| transcriptional regulatory protein zraR [Escherichia coli KTE165]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|301019445|ref|ZP_07183618.1| response regulator receiver domain protein [Escherichia coli MS
69-1]
gi|419918878|ref|ZP_14437053.1| transcriptional regulatory protein ZraR [Escherichia coli KD2]
gi|300399260|gb|EFJ82798.1| response regulator receiver domain protein [Escherichia coli MS
69-1]
gi|388389091|gb|EIL50629.1| transcriptional regulatory protein ZraR [Escherichia coli KD2]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVVLANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|298376717|ref|ZP_06986672.1| two-component system sensor histidine kinase [Bacteroides sp.
3_1_19]
gi|301310020|ref|ZP_07215959.1| two-component system sensor histidine kinase [Bacteroides sp. 20_3]
gi|423340452|ref|ZP_17318191.1| hypothetical protein HMPREF1059_04116 [Parabacteroides distasonis
CL09T03C24]
gi|298266595|gb|EFI08253.1| two-component system sensor histidine kinase [Bacteroides sp.
3_1_19]
gi|300831594|gb|EFK62225.1| two-component system sensor histidine kinase [Bacteroides sp. 20_3]
gi|409227887|gb|EKN20783.1| hypothetical protein HMPREF1059_04116 [Parabacteroides distasonis
CL09T03C24]
Length = 374
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+ + +VL+VDD T + +++ +L++ Y + TC AL I E+ +++L D+
Sbjct: 2 DKLASEYKVLIVDDVPTNVMLVQAILKKEGYTLLTCDSGTKALRIANEKHP--NLILLDI 59
Query: 88 HMPDMDGFKLLEHIGLE---MDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
MP+MDG+++L+H+ D+PVI+MSA + ++++G + GA +Y+ KP + EEL
Sbjct: 60 MMPEMDGYEVLQHLKSNPETTDIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQREEL 117
>gi|224370797|ref|YP_002604961.1| two-component system transcriptional regulator [Desulfobacterium
autotrophicum HRM2]
gi|223693514|gb|ACN16797.1| predicted two-component system transcriptional regulator
[Desulfobacterium autotrophicum HRM2]
Length = 498
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK-GCFDVVLSDVHMPDMDG 94
+LVVDD+ L + E+ R Y+V T A++I+++ K GC +D++MP+MDG
Sbjct: 9 ILVVDDEEGILDVSEEYFERKGYDVYTARNGIEAIEIIKQVKIGC---CFTDINMPEMDG 65
Query: 95 FKLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
+L E I G++ LP+++M+ + +R +++G D+L+KP+ E+++ ++ ++R+R
Sbjct: 66 LELAERIRGIDNTLPIVIMTGYPSLDNTIRTLKNGVVDFLVKPVNLEQMELSYKRIIRER 125
>gi|82546346|ref|YP_410293.1| response regulator of hydrogenase 3 activity [Shigella boydii
Sb227]
gi|417683255|ref|ZP_12332603.1| transcriptional regulatory protein zraR [Shigella boydii 3594-74]
gi|421684625|ref|ZP_16124409.1| response regulator [Shigella flexneri 1485-80]
gi|81247757|gb|ABB68465.1| response regulator of hydrogenase 3 activity [Shigella boydii
Sb227]
gi|332092316|gb|EGI97391.1| transcriptional regulatory protein zraR [Shigella boydii 3594-74]
gi|404335966|gb|EJZ62431.1| response regulator [Shigella flexneri 1485-80]
Length = 408
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|420327657|ref|ZP_14829397.1| transcriptional regulatory protein zraR [Shigella flexneri CCH060]
gi|391246721|gb|EIQ05980.1| transcriptional regulatory protein zraR [Shigella flexneri CCH060]
Length = 408
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|374704432|ref|ZP_09711302.1| two component sigma-54 specific Fis family transcriptional
regulator [Pseudomonas sp. S9]
Length = 447
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL-RERKGCFDVVLSDVHMPDMDG 94
VLVVDD++ ++Q L ++V TCS AA AL ++ R+ G V++SDV MP DG
Sbjct: 5 VLVVDDEVAIREAVQQWLELSGFSVQTCSSAAQALALVDRDFPG---VIISDVRMPGTDG 61
Query: 95 FKLLEH-IGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
+LLE I L+ DLPVIM++ G V ++ + GA D++ KP E L + + + KR
Sbjct: 62 LQLLEKLIELDRDLPVIMVTGHGDVPMAVQALHRGAYDFIEKPFTPERLLDSVRRALEKR 121
Query: 154 W--NENKE 159
EN+E
Sbjct: 122 RLVCENRE 129
>gi|77359575|ref|YP_339150.1| response regulator in two-component regulatory system
[Pseudoalteromonas haloplanktis TAC125]
gi|76874486|emb|CAI85707.1| putative response regulator in two-component regulatory system
[Pseudoalteromonas haloplanktis TAC125]
Length = 449
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
+P P G +VL+VDDD + L++L + Y VTTC +AL IL+ + FD V++
Sbjct: 1 MPAIKPQGAKVLLVDDDASLLKLLAIRIESKGYEVTTCESGLIALQILKSQ--VFDAVVT 58
Query: 86 DVHMPDMDGFKLLEHIGLEMD-LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
D+ M +MDG L + LPVIMM+A G + + + G ++ KPI ++EL
Sbjct: 59 DLRMDEMDGMALHRQLQSRYPALPVIMMTAHGSIPDAVEATKQGIFAFITKPIDKDEL 116
>gi|297171130|gb|ADI22141.1| HD-GYP domain [uncultured myxobacterium HF0200_19H16]
Length = 496
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+ P RVLVVDD+ L I+ + L Y V A ALD L+ FDV+L+D+
Sbjct: 9 DEVP---RVLVVDDEEAVLDIVNEFLVLEGYYVKPVGSARAALDQLKTEP--FDVILTDL 63
Query: 88 HMPDMDGFKLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIW 146
MPDMDG +L++ I D ++MM+ G V + ++ GA DY++KP + +++ +
Sbjct: 64 KMPDMDGIELIQRIRDWNPDPVLVMMTGFGTVETAIEAMKLGAFDYILKPFKPDDVVAVL 123
Query: 147 QHVVRKR--WNEN---KEHENSGSLEETDHHKRGSDE 178
+ + KR EN +E N L E RG DE
Sbjct: 124 KRALEKRRLRRENLSLRETLNFYELSEILSSDRGLDE 160
>gi|22299907|ref|NP_683154.1| two-component response regulator [Thermosynechococcus elongatus
BP-1]
gi|22296092|dbj|BAC09916.1| two-component response regulator [Thermosynechococcus elongatus
BP-1]
Length = 251
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y V T + AL R+ + D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYTVVTAADGEEALTKFRQEQP--DLVVLDVMMPKLDG 68
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 69 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|417235421|ref|ZP_12034541.1| transcriptional regulator ZraR [Escherichia coli 9.0111]
gi|386214971|gb|EII25375.1| transcriptional regulator ZraR [Escherichia coli 9.0111]
Length = 441
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YN+ + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNIALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|206891080|ref|YP_002248567.1| FrgC [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206743018|gb|ACI22075.1| FrgC [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 139
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Query: 35 RVLVVDDDITCLRILEQMLR-RCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++L+VDD+ L++L +LR + Y +TT + A+++ +KG FD+V++D+ MP +D
Sbjct: 4 KILIVDDEPDMLKLLSMILREKTPYEITTTNNPIEAVEL--AKKGDFDLVITDLKMPGLD 61
Query: 94 GFKLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
G +LLE + + D+PVI+++A G + A I G D++ KP ++E++
Sbjct: 62 GLQLLEEVKKRDEDVPVIIITAYGTIDAATEAIEKGGFDFITKPFKKEQI 111
>gi|227885465|ref|ZP_04003270.1| transcriptional regulatory protein ZraR [Escherichia coli 83972]
gi|386641655|ref|YP_006108453.1| transcriptional regulator [Escherichia coli ABU 83972]
gi|432414318|ref|ZP_19656967.1| transcriptional regulatory protein zraR [Escherichia coli KTE39]
gi|432493276|ref|ZP_19735102.1| transcriptional regulatory protein zraR [Escherichia coli KTE214]
gi|227837539|gb|EEJ48005.1| transcriptional regulatory protein ZraR [Escherichia coli 83972]
gi|307556147|gb|ADN48922.1| transcriptional regulatory protein [Escherichia coli ABU 83972]
gi|430931712|gb|ELC52151.1| transcriptional regulatory protein zraR [Escherichia coli KTE39]
gi|431030175|gb|ELD43190.1| transcriptional regulatory protein zraR [Escherichia coli KTE214]
Length = 441
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|445499601|ref|ZP_21466456.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Janthinobacterium sp. HH01]
gi|444789596|gb|ELX11144.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Janthinobacterium sp. HH01]
Length = 756
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 78/133 (58%), Gaps = 6/133 (4%)
Query: 22 ADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFD 81
A VA+PD P R+L+VDD+ L L ++LR Y++ T + + AL L K FD
Sbjct: 17 APVALPDNCP---RILLVDDEPRLLSSLYELLRDRDYHLVTATCGSEALAQLTRLK--FD 71
Query: 82 VVLSDVHMPDMDGFKLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREE 140
++L D+ +PDM G ++++ I E+D VI+MS D + A + ++ GA DYL KP E
Sbjct: 72 LILLDLRLPDMSGHEIMDFINAKEIDGDVIVMSGDVGIEAAIGALKRGAYDYLRKPYSRE 131
Query: 141 ELKNIWQHVVRKR 153
EL ++ ++KR
Sbjct: 132 ELLKTVENALQKR 144
>gi|409992372|ref|ZP_11275566.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
gi|291568228|dbj|BAI90500.1| two-component hybrid sensor and regulator [Arthrospira platensis
NIES-39]
gi|409936762|gb|EKN78232.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
Length = 1336
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++L+VDDD L++L L Y VT + AL+IL E D++L DV MP M
Sbjct: 871 FKILIVDDDPINLQVLANYLYLENYAVTQATNGMEALEIL-ESGFIPDLILLDVMMPRMT 929
Query: 94 GFKLLEHIGLEM---DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEE-LKNIWQHV 149
G+++ E I + LP++M++A R+S ++ G+ GA DYL KP+ +EE L I H+
Sbjct: 930 GYEVTEKIREDWPPHQLPIMMLTAKNRISDLVVGLELGANDYLSKPLNKEELLARIKTHI 989
Query: 150 VRKRWNENKEH 160
K+ K H
Sbjct: 990 RIKKLRTEKAH 1000
>gi|406895984|gb|EKD40397.1| sigma-54 dependent DNA-binding response regulator (NtrC-type
regulator), partial [uncultured bacterium]
Length = 202
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD L +LE L+ Y V + ALD+L+ + DV++SD+ MP+M G
Sbjct: 6 RILIVDDDQNILEVLEARLQAAGYRVYRAASGPAALDLLKSKP--VDVLVSDMKMPEMSG 63
Query: 95 FKL-LEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
+L +E + ++ LPVI ++A G + + ++ GA DYL KP +EL
Sbjct: 64 MELFVEAVAIQPQLPVIFLTAYGTIPDAVTAVKAGAVDYLTKPFDGKEL 112
>gi|419807301|ref|ZP_14332366.1| transcriptional regulatory protein ZraR [Escherichia coli AI27]
gi|384469706|gb|EIE53852.1| transcriptional regulatory protein ZraR [Escherichia coli AI27]
Length = 441
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 VTLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|224126555|ref|XP_002329583.1| predicted protein [Populus trichocarpa]
gi|222870292|gb|EEF07423.1| predicted protein [Populus trichocarpa]
Length = 549
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 23 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
D++ FP GL VL++D+D + ++ L Y V T AL + G F V
Sbjct: 7 DLSAWKDFPKGLSVLLLDEDNSSAAEIKSKLEALDYIVYTFCNENEALLAISNEPGSFHV 66
Query: 83 VLSDVHMPDMDG-FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEE 141
+ +V + +G FK LE DLP IM S ++ +M+ I GA ++L KP+ E++
Sbjct: 67 AIVEVSTSNSNGSFKFLE---TAKDLPTIMTSNIHCLNTMMKCIALGAVEFLRKPLSEDK 123
Query: 142 LKNIWQHVVRKRWN 155
L+NIWQHVV K +N
Sbjct: 124 LRNIWQHVVHKAFN 137
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 44/57 (77%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 275
KK +V W+ ELH++FV V +LG+D+A+P R+LELM V LTR NVASHLQ+ +++
Sbjct: 308 KKMKVDWTPELHKKFVQVVEKLGVDQAIPSRVLELMKVESLTRHNVASHLQKYRMRR 364
>gi|307105497|gb|EFN53746.1| hypothetical protein CHLNCDRAFT_136336 [Chlorella variabilis]
Length = 575
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 52/71 (73%), Gaps = 6/71 (8%)
Query: 213 DDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEI 271
DDP KK R++W+ LH++F+ AVN++G +DKA+PK +++ M V GLTRENVASH
Sbjct: 460 DDPCALKKARLIWTPALHRRFLEAVNRVGGVDKALPKAVMKEMGVSGLTRENVASH---- 515
Query: 272 NLQKFRLYLKR 282
LQK R+ LK+
Sbjct: 516 -LQKHRMRLKK 525
>gi|422367514|ref|ZP_16447950.1| response regulator receiver domain protein [Escherichia coli MS
16-3]
gi|432895993|ref|ZP_20107311.1| transcriptional regulatory protein zraR [Escherichia coli KTE192]
gi|433030968|ref|ZP_20218806.1| transcriptional regulatory protein zraR [Escherichia coli KTE109]
gi|315300747|gb|EFU59972.1| response regulator receiver domain protein [Escherichia coli MS
16-3]
gi|431433098|gb|ELH14771.1| transcriptional regulatory protein zraR [Escherichia coli KTE192]
gi|431539113|gb|ELI15088.1| transcriptional regulatory protein zraR [Escherichia coli KTE109]
Length = 441
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
L+ I L +PV++M+A V + ++ GA DYLIKP+ + L++ +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQSTLE 118
>gi|298248600|ref|ZP_06972405.1| multi-sensor signal transduction histidine kinase [Ktedonobacter
racemifer DSM 44963]
gi|297551259|gb|EFH85125.1| multi-sensor signal transduction histidine kinase [Ktedonobacter
racemifer DSM 44963]
Length = 1036
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 67/106 (63%), Gaps = 5/106 (4%)
Query: 35 RVLVVDDDITCLRILEQ--MLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
R+L+VDDD+ L+ L + MLR +V T S A AL L+ R+ +DVV+SD+ MP M
Sbjct: 32 RILLVDDDMAALQALSRTFMLRMSDVDVDTSSSALDALAQLQSRE--YDVVVSDIKMPMM 89
Query: 93 DGFKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
DG +LL +I M D+PV++++ G M+ ++ GA DY +KPI
Sbjct: 90 DGIQLLSNIHKRMPDIPVLLITGHGEHELAMQALQEGAYDYTLKPI 135
>gi|158521788|ref|YP_001529658.1| two component sigma-54 specific Fis family transcriptional
regulator [Desulfococcus oleovorans Hxd3]
gi|158510614|gb|ABW67581.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfococcus oleovorans Hxd3]
Length = 465
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VLVVDD+ +L ML R Y V T + A AL+++ K FD +L D+ MP MDG
Sbjct: 11 VLVVDDEENMRHMLAAMLTREGYQVETAANGAQALEMVA--KQPFDFILCDIKMPRMDGL 68
Query: 96 KLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
L H D VIMMSA G + + ++HGA DY+ KP + +E+
Sbjct: 69 AFLAHRTEHFPDATVIMMSAYGTIDTAVEALKHGAYDYISKPFKSDEV 116
>gi|418529912|ref|ZP_13095839.1| chemotaxis protein CheA [Comamonas testosteroni ATCC 11996]
gi|371452968|gb|EHN65993.1| chemotaxis protein CheA [Comamonas testosteroni ATCC 11996]
Length = 2158
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 80/148 (54%), Gaps = 16/148 (10%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
SGG+ + AA VP VLVVDD IT R+ +++L+R Y VT + A+
Sbjct: 2000 SGGADLLGAEAAQTTVP-------LVLVVDDSITVRRVTQRLLQREGYRVTLAADGLQAM 2052
Query: 71 DILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRH 127
+ L++ + VLSD+ MP MDGF LL +I + L PV+M+++ R++ R +
Sbjct: 2053 ERLQDERPTL--VLSDIEMPRMDGFDLLRNIRADQKLEGMPVVMITS--RIAQKHREMAR 2108
Query: 128 --GACDYLIKPIREEELKNIWQHVVRKR 153
GA YL KP +EEL + QH +R
Sbjct: 2109 DLGANHYLGKPYSDEELLGLIQHYALQR 2136
>gi|334116724|ref|ZP_08490816.1| two component transcriptional regulator, winged helix family
[Microcoleus vaginatus FGP-2]
gi|428316884|ref|YP_007114766.1| two component transcriptional regulator, winged helix family
[Oscillatoria nigro-viridis PCC 7112]
gi|333461544|gb|EGK90149.1| two component transcriptional regulator, winged helix family
[Microcoleus vaginatus FGP-2]
gi|428240564|gb|AFZ06350.1| two component transcriptional regulator, winged helix family
[Oscillatoria nigro-viridis PCC 7112]
Length = 247
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + AL+ R + D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRNTEP--DLVVLDVMMPKLDG 68
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 69 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|123486693|ref|XP_001324781.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
gi|121907669|gb|EAY12558.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
Length = 637
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L +L VDDD L + + L+ Y+V+ S AL++L+ FD++LSDV MP M+
Sbjct: 12 LHILAVDDDAVQLHAVTKALKSLGYHVSNASNGQEALEVLKS-GNTFDLILSDVMMPVMN 70
Query: 94 GFKLLEHIGLEM---DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
G + L+ + +P+IMMS++ + V + GA DY+IKP+ + LKN++ +V
Sbjct: 71 GPQFLQETRADSRFEQIPIIMMSSNDQYEIVFDCLSKGADDYIIKPLTPQVLKNMYANVW 130
Query: 151 RKR 153
KR
Sbjct: 131 LKR 133
>gi|417287781|ref|ZP_12075067.1| transcriptional regulator ZraR [Escherichia coli TW07793]
gi|386248566|gb|EII94738.1| transcriptional regulator ZraR [Escherichia coli TW07793]
Length = 441
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|239617306|ref|YP_002940628.1| two component transcriptional regulator, winged helix family
[Kosmotoga olearia TBF 19.5.1]
gi|239506137|gb|ACR79624.1| two component transcriptional regulator, winged helix family
[Kosmotoga olearia TBF 19.5.1]
Length = 221
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
+VL+V+DD + ++ L Y V T ALD L K DVVL DV +P+M+G
Sbjct: 4 KVLLVEDDPHIRKFIQLELEHEGYEVKTAVTGPQALDELE--KELPDVVLLDVMLPEMNG 61
Query: 95 FKLLEHI--GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
F +LE I +LPVIM++A G + +RG++ GA DY++KP EEL + V+R+
Sbjct: 62 FTVLERIREDFSTELPVIMLTARGELEDRVRGLKSGADDYIVKPFHIEELLARLEAVLRR 121
Query: 153 R 153
+
Sbjct: 122 K 122
>gi|422302664|ref|ZP_16390025.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9806]
gi|425442909|ref|ZP_18823143.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9717]
gi|425472686|ref|ZP_18851527.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9701]
gi|389715919|emb|CCH99776.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9717]
gi|389788043|emb|CCI16590.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9806]
gi|389881212|emb|CCI38224.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9701]
Length = 242
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y V T + AL+ R + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEALETFRTAEP--DLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|26250776|ref|NP_756816.1| transcriptional regulatory protein ZraR [Escherichia coli CFT073]
gi|110644339|ref|YP_672069.1| transcriptional regulatory protein ZraR [Escherichia coli 536]
gi|191174305|ref|ZP_03035813.1| response regulator ZraR [Escherichia coli F11]
gi|300985437|ref|ZP_07177440.1| response regulator receiver domain protein [Escherichia coli MS
200-1]
gi|306812019|ref|ZP_07446227.1| transcriptional regulatory protein ZraR [Escherichia coli NC101]
gi|386631972|ref|YP_006151692.1| transcriptional regulatory protein ZraR [Escherichia coli str.
'clone D i2']
gi|386636892|ref|YP_006156611.1| transcriptional regulatory protein ZraR [Escherichia coli str.
'clone D i14']
gi|419915863|ref|ZP_14434196.1| transcriptional regulatory protein ZraR [Escherichia coli KD1]
gi|422373381|ref|ZP_16453693.1| response regulator receiver domain protein [Escherichia coli MS
60-1]
gi|432383916|ref|ZP_19626838.1| transcriptional regulatory protein zraR [Escherichia coli KTE15]
gi|432384931|ref|ZP_19627837.1| transcriptional regulatory protein zraR [Escherichia coli KTE16]
gi|432429762|ref|ZP_19672215.1| transcriptional regulatory protein zraR [Escherichia coli KTE187]
gi|432438981|ref|ZP_19681354.1| transcriptional regulatory protein zraR [Escherichia coli KTE188]
gi|432454252|ref|ZP_19696469.1| transcriptional regulatory protein zraR [Escherichia coli KTE201]
gi|432468410|ref|ZP_19710483.1| transcriptional regulatory protein zraR [Escherichia coli KTE205]
gi|432473370|ref|ZP_19715404.1| transcriptional regulatory protein zraR [Escherichia coli KTE206]
gi|432506914|ref|ZP_19748629.1| transcriptional regulatory protein zraR [Escherichia coli KTE220]
gi|432516408|ref|ZP_19753620.1| transcriptional regulatory protein zraR [Escherichia coli KTE224]
gi|432526496|ref|ZP_19763605.1| transcriptional regulatory protein zraR [Escherichia coli KTE230]
gi|432571297|ref|ZP_19807798.1| transcriptional regulatory protein zraR [Escherichia coli KTE53]
gi|432585601|ref|ZP_19821988.1| transcriptional regulatory protein zraR [Escherichia coli KTE57]
gi|432595276|ref|ZP_19831582.1| transcriptional regulatory protein zraR [Escherichia coli KTE60]
gi|432605460|ref|ZP_19841666.1| transcriptional regulatory protein zraR [Escherichia coli KTE67]
gi|432614022|ref|ZP_19850176.1| transcriptional regulatory protein zraR [Escherichia coli KTE72]
gi|432648690|ref|ZP_19884472.1| transcriptional regulatory protein zraR [Escherichia coli KTE86]
gi|432653677|ref|ZP_19889412.1| transcriptional regulatory protein zraR [Escherichia coli KTE87]
gi|432658255|ref|ZP_19893949.1| transcriptional regulatory protein zraR [Escherichia coli KTE93]
gi|432701534|ref|ZP_19936675.1| transcriptional regulatory protein zraR [Escherichia coli KTE169]
gi|432715876|ref|ZP_19950898.1| transcriptional regulatory protein zraR [Escherichia coli KTE8]
gi|432747993|ref|ZP_19982652.1| transcriptional regulatory protein zraR [Escherichia coli KTE43]
gi|432781343|ref|ZP_20015551.1| transcriptional regulatory protein zraR [Escherichia coli KTE63]
gi|432799926|ref|ZP_20033925.1| transcriptional regulatory protein zraR [Escherichia coli KTE84]
gi|432847375|ref|ZP_20079795.1| transcriptional regulatory protein zraR [Escherichia coli KTE141]
gi|432907912|ref|ZP_20116223.1| transcriptional regulatory protein zraR [Escherichia coli KTE194]
gi|432940918|ref|ZP_20138737.1| transcriptional regulatory protein zraR [Escherichia coli KTE183]
gi|432969599|ref|ZP_20158500.1| transcriptional regulatory protein zraR [Escherichia coli KTE207]
gi|432976245|ref|ZP_20165075.1| transcriptional regulatory protein zraR [Escherichia coli KTE209]
gi|432987866|ref|ZP_20176574.1| transcriptional regulatory protein zraR [Escherichia coli KTE215]
gi|432993226|ref|ZP_20181854.1| transcriptional regulatory protein zraR [Escherichia coli KTE218]
gi|432997685|ref|ZP_20186262.1| transcriptional regulatory protein zraR [Escherichia coli KTE223]
gi|433041038|ref|ZP_20228619.1| transcriptional regulatory protein zraR [Escherichia coli KTE113]
gi|433060551|ref|ZP_20247575.1| transcriptional regulatory protein zraR [Escherichia coli KTE124]
gi|433075359|ref|ZP_20261987.1| transcriptional regulatory protein zraR [Escherichia coli KTE129]
gi|433080233|ref|ZP_20266743.1| transcriptional regulatory protein zraR [Escherichia coli KTE131]
gi|433084950|ref|ZP_20271389.1| transcriptional regulatory protein zraR [Escherichia coli KTE133]
gi|433089755|ref|ZP_20276106.1| transcriptional regulatory protein zraR [Escherichia coli KTE137]
gi|433103623|ref|ZP_20289685.1| transcriptional regulatory protein zraR [Escherichia coli KTE145]
gi|433117959|ref|ZP_20303731.1| transcriptional regulatory protein zraR [Escherichia coli KTE153]
gi|433122688|ref|ZP_20308337.1| transcriptional regulatory protein zraR [Escherichia coli KTE157]
gi|433127661|ref|ZP_20313194.1| transcriptional regulatory protein zraR [Escherichia coli KTE160]
gi|433141734|ref|ZP_20326964.1| transcriptional regulatory protein zraR [Escherichia coli KTE167]
gi|433146660|ref|ZP_20331784.1| transcriptional regulatory protein zraR [Escherichia coli KTE168]
gi|433151685|ref|ZP_20336675.1| transcriptional regulatory protein zraR [Escherichia coli KTE174]
gi|433185816|ref|ZP_20370043.1| transcriptional regulatory protein zraR [Escherichia coli KTE85]
gi|433190829|ref|ZP_20374909.1| transcriptional regulatory protein zraR [Escherichia coli KTE88]
gi|433210222|ref|ZP_20393877.1| transcriptional regulatory protein zraR [Escherichia coli KTE97]
gi|433215059|ref|ZP_20398625.1| transcriptional regulatory protein zraR [Escherichia coli KTE99]
gi|442607398|ref|ZP_21022169.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli Nissle 1917]
gi|26111207|gb|AAN83390.1|AE016770_190 Transcriptional Regulatory protein zraR [Escherichia coli CFT073]
gi|110345931|gb|ABG72168.1| transcriptional regulatory protein ZraR [Escherichia coli 536]
gi|190905437|gb|EDV65068.1| response regulator ZraR [Escherichia coli F11]
gi|300306529|gb|EFJ61049.1| response regulator receiver domain protein [Escherichia coli MS
200-1]
gi|305854624|gb|EFM55060.1| transcriptional regulatory protein ZraR [Escherichia coli NC101]
gi|324015258|gb|EGB84477.1| response regulator receiver domain protein [Escherichia coli MS
60-1]
gi|355422871|gb|AER87068.1| transcriptional regulatory protein ZraR [Escherichia coli str.
'clone D i2']
gi|355427791|gb|AER91987.1| transcriptional regulatory protein ZraR [Escherichia coli str.
'clone D i14']
gi|388382722|gb|EIL44568.1| transcriptional regulatory protein ZraR [Escherichia coli KD1]
gi|430902723|gb|ELC24570.1| transcriptional regulatory protein zraR [Escherichia coli KTE15]
gi|430911658|gb|ELC32933.1| transcriptional regulatory protein zraR [Escherichia coli KTE16]
gi|430958215|gb|ELC76811.1| transcriptional regulatory protein zraR [Escherichia coli KTE187]
gi|430959319|gb|ELC77649.1| transcriptional regulatory protein zraR [Escherichia coli KTE188]
gi|430987363|gb|ELD03902.1| transcriptional regulatory protein zraR [Escherichia coli KTE201]
gi|430989799|gb|ELD06248.1| transcriptional regulatory protein zraR [Escherichia coli KTE205]
gi|430995123|gb|ELD11431.1| transcriptional regulatory protein zraR [Escherichia coli KTE206]
gi|431034492|gb|ELD46427.1| transcriptional regulatory protein zraR [Escherichia coli KTE220]
gi|431037500|gb|ELD48482.1| transcriptional regulatory protein zraR [Escherichia coli KTE224]
gi|431047011|gb|ELD57101.1| transcriptional regulatory protein zraR [Escherichia coli KTE230]
gi|431096388|gb|ELE01873.1| transcriptional regulatory protein zraR [Escherichia coli KTE53]
gi|431113763|gb|ELE17415.1| transcriptional regulatory protein zraR [Escherichia coli KTE57]
gi|431125088|gb|ELE27519.1| transcriptional regulatory protein zraR [Escherichia coli KTE60]
gi|431143631|gb|ELE45352.1| transcriptional regulatory protein zraR [Escherichia coli KTE67]
gi|431145742|gb|ELE47352.1| transcriptional regulatory protein zraR [Escherichia coli KTE72]
gi|431177248|gb|ELE77182.1| transcriptional regulatory protein zraR [Escherichia coli KTE86]
gi|431186312|gb|ELE85874.1| transcriptional regulatory protein zraR [Escherichia coli KTE87]
gi|431187081|gb|ELE86601.1| transcriptional regulatory protein zraR [Escherichia coli KTE93]
gi|431239304|gb|ELF33945.1| transcriptional regulatory protein zraR [Escherichia coli KTE169]
gi|431250988|gb|ELF45045.1| transcriptional regulatory protein zraR [Escherichia coli KTE8]
gi|431288988|gb|ELF79741.1| transcriptional regulatory protein zraR [Escherichia coli KTE43]
gi|431333900|gb|ELG21083.1| transcriptional regulatory protein zraR [Escherichia coli KTE63]
gi|431353282|gb|ELG40036.1| transcriptional regulatory protein zraR [Escherichia coli KTE84]
gi|431391735|gb|ELG75345.1| transcriptional regulatory protein zraR [Escherichia coli KTE141]
gi|431425842|gb|ELH07889.1| transcriptional regulatory protein zraR [Escherichia coli KTE194]
gi|431459264|gb|ELH39578.1| transcriptional regulatory protein zraR [Escherichia coli KTE183]
gi|431484817|gb|ELH64489.1| transcriptional regulatory protein zraR [Escherichia coli KTE209]
gi|431489614|gb|ELH69240.1| transcriptional regulatory protein zraR [Escherichia coli KTE207]
gi|431492865|gb|ELH72463.1| transcriptional regulatory protein zraR [Escherichia coli KTE215]
gi|431513233|gb|ELH91317.1| transcriptional regulatory protein zraR [Escherichia coli KTE218]
gi|431520087|gb|ELH97515.1| transcriptional regulatory protein zraR [Escherichia coli KTE223]
gi|431547462|gb|ELI21841.1| transcriptional regulatory protein zraR [Escherichia coli KTE113]
gi|431564913|gb|ELI38059.1| transcriptional regulatory protein zraR [Escherichia coli KTE124]
gi|431581469|gb|ELI53918.1| transcriptional regulatory protein zraR [Escherichia coli KTE129]
gi|431592469|gb|ELI63046.1| transcriptional regulatory protein zraR [Escherichia coli KTE131]
gi|431597023|gb|ELI66948.1| transcriptional regulatory protein zraR [Escherichia coli KTE133]
gi|431599731|gb|ELI69435.1| transcriptional regulatory protein zraR [Escherichia coli KTE137]
gi|431614733|gb|ELI83870.1| transcriptional regulatory protein zraR [Escherichia coli KTE145]
gi|431629587|gb|ELI97948.1| transcriptional regulatory protein zraR [Escherichia coli KTE153]
gi|431638036|gb|ELJ06084.1| transcriptional regulatory protein zraR [Escherichia coli KTE157]
gi|431639201|gb|ELJ07068.1| transcriptional regulatory protein zraR [Escherichia coli KTE160]
gi|431654419|gb|ELJ21475.1| transcriptional regulatory protein zraR [Escherichia coli KTE167]
gi|431656557|gb|ELJ23538.1| transcriptional regulatory protein zraR [Escherichia coli KTE168]
gi|431666424|gb|ELJ33062.1| transcriptional regulatory protein zraR [Escherichia coli KTE174]
gi|431700783|gb|ELJ65713.1| transcriptional regulatory protein zraR [Escherichia coli KTE85]
gi|431700918|gb|ELJ65844.1| transcriptional regulatory protein zraR [Escherichia coli KTE88]
gi|431727659|gb|ELJ91406.1| transcriptional regulatory protein zraR [Escherichia coli KTE97]
gi|431730735|gb|ELJ94295.1| transcriptional regulatory protein zraR [Escherichia coli KTE99]
gi|441711351|emb|CCQ08146.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli Nissle 1917]
Length = 441
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|381149247|gb|AFF60406.1| golden 2-like 2 transcription factor [Capsicum annuum]
Length = 312
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 214 DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINL 273
+P KK +V W+ ELH++FV AV +LG+DKAVP RILELM GLTR N+ASH L
Sbjct: 88 NPEGKKKVKVDWTPELHRRFVKAVEKLGVDKAVPSRILELMATDGLTRHNIASH-----L 142
Query: 274 QKFRLYLKRL 283
QK+R + K L
Sbjct: 143 QKYRAHRKHL 152
>gi|422964121|ref|ZP_16973330.1| transcriptional regulatory protein zraR [Escherichia coli H494]
gi|371591560|gb|EHN80516.1| transcriptional regulatory protein zraR [Escherichia coli H494]
Length = 441
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANGGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|297810093|ref|XP_002872930.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318767|gb|EFH49189.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 369
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
++F + VL++D D TCL L +M+R+C Y V ++A I+ + D+VL+D
Sbjct: 8 ERFSKDICVLLLDSDATCLANLSEMIRKCGYRVVATTRAEDLPLIINNKDKKIDLVLADF 67
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
+ +M+ ++LLE I L ++PV++ A + A++ + GA L KP +E +LK +WQ
Sbjct: 68 RLIEMNKYELLEKIRLICEIPVVVSDAYVK-DAIVECLCRGAKLCLEKPFKENDLKLLWQ 126
Query: 148 HVVRKR 153
VR++
Sbjct: 127 FTVRRQ 132
>gi|433200792|ref|ZP_20384667.1| transcriptional regulatory protein zraR [Escherichia coli KTE94]
gi|431716003|gb|ELJ80145.1| transcriptional regulatory protein zraR [Escherichia coli KTE94]
Length = 441
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|376262387|ref|YP_005149107.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Clostridium sp. BNL1100]
gi|373946381|gb|AEY67302.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Clostridium sp. BNL1100]
Length = 227
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+V+D+I L Q+LR+ Y V + LD G +D++L D+ +P+MD
Sbjct: 1 MRILIVEDEIHLAEALSQILRKNNYTVDIAYDGSTGLD--NALSGIYDLILLDIMLPNMD 58
Query: 94 GFKLLEHIGLEMDL-PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEEL 142
G +L+HI E L PVI+++A G ++ ++G+ GA DYL KP EEL
Sbjct: 59 GISVLKHIRSENILTPVILLTAKGEIADKVKGLDSGADDYLPKPFATEEL 108
>gi|222158710|ref|YP_002558849.1| Transcriptional regulatory protein zraR [Escherichia coli LF82]
gi|331660565|ref|ZP_08361498.1| transcriptional regulatory protein ZraR [Escherichia coli TA206]
gi|387619317|ref|YP_006122339.1| transcriptional regulatory protein ZraR [Escherichia coli O83:H1
str. NRG 857C]
gi|432443620|ref|ZP_19685941.1| transcriptional regulatory protein zraR [Escherichia coli KTE189]
gi|432448694|ref|ZP_19690988.1| transcriptional regulatory protein zraR [Escherichia coli KTE191]
gi|433016352|ref|ZP_20204671.1| transcriptional regulatory protein zraR [Escherichia coli KTE104]
gi|433025934|ref|ZP_20213894.1| transcriptional regulatory protein zraR [Escherichia coli KTE106]
gi|433326309|ref|ZP_20403194.1| transcriptional regulatory protein ZraR [Escherichia coli J96]
gi|222035715|emb|CAP78460.1| Transcriptional regulatory protein zraR [Escherichia coli LF82]
gi|312948578|gb|ADR29405.1| transcriptional regulatory protein ZraR [Escherichia coli O83:H1
str. NRG 857C]
gi|331052348|gb|EGI24386.1| transcriptional regulatory protein ZraR [Escherichia coli TA206]
gi|430960218|gb|ELC78374.1| transcriptional regulatory protein zraR [Escherichia coli KTE189]
gi|430970379|gb|ELC87451.1| transcriptional regulatory protein zraR [Escherichia coli KTE191]
gi|431525493|gb|ELI02284.1| transcriptional regulatory protein zraR [Escherichia coli KTE104]
gi|431529524|gb|ELI06224.1| transcriptional regulatory protein zraR [Escherichia coli KTE106]
gi|432345615|gb|ELL40116.1| transcriptional regulatory protein ZraR [Escherichia coli J96]
Length = 441
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|225446455|ref|XP_002275230.1| PREDICTED: transcription activator GLK1-like [Vitis vinifera]
Length = 432
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 8/86 (9%)
Query: 201 SAKEEDDGE---LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 257
S KE + G +S +P +K +V W+ ELH++FV AV QLG+DKAVP RILE+M +
Sbjct: 133 SPKEVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGID 192
Query: 258 GLTRENVASHLQEINLQKFRLYLKRL 283
LTR N+ASH LQK+R + K L
Sbjct: 193 CLTRHNIASH-----LQKYRSHRKHL 213
>gi|407796717|ref|ZP_11143669.1| DNA-binding response regulator [Salimicrobium sp. MJ3]
gi|407018871|gb|EKE31591.1| DNA-binding response regulator [Salimicrobium sp. MJ3]
Length = 221
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD L +LE LR Y +T AL +LRER FD+VL D+ M MDG
Sbjct: 3 KLLVVDDQERMLNLLELYLRPHGYEITKVPSGQEALRMLRERP--FDLVLLDIMMEGMDG 60
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
F+ + DLPV+M++A + V++G++ GA DY+ KP E+ L + ++R+
Sbjct: 61 FETCRRLRTFSDLPVLMLTAKDQKEDVVKGLKTGADDYVTKPFDEDILVARIETLLRR 118
>gi|332709113|ref|ZP_08429081.1| two component transcriptional regulator, winged helix family
[Moorea producens 3L]
gi|332352119|gb|EGJ31691.1| two component transcriptional regulator, winged helix family
[Moorea producens 3L]
Length = 242
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y V T + AL+ R+ + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEALNTFRDTEP--DLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|119944994|ref|YP_942674.1| Fis family two component sigma-54 specific transcriptional
regulator protein [Psychromonas ingrahamii 37]
gi|119863598|gb|ABM03075.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Psychromonas ingrahamii 37]
Length = 472
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 23 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
+V ++F VL+VDDD +L +++R Y V AL+++R R D+
Sbjct: 2 NVGFKEKFKDAPTVLIVDDDPDICSLLSYLMKREGYVVEIVHDGMAALELMRNR--VPDI 59
Query: 83 VLSDVHMPDMDGFKLLEHIGL-EMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
+L+D+ MP MDGF+LL+ + L + DLPV++++A V + ++ GA DYL KP
Sbjct: 60 ILTDLRMPRMDGFELLKQVKLIKQDLPVVILTAYAGVHGAVESMKEGADDYLAKPF 115
>gi|433132587|ref|ZP_20318002.1| transcriptional regulatory protein zraR [Escherichia coli KTE163]
gi|431641404|gb|ELJ09145.1| transcriptional regulatory protein zraR [Escherichia coli KTE163]
Length = 441
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVETLKTGALDYLIKPL 108
>gi|242093734|ref|XP_002437357.1| hypothetical protein SORBIDRAFT_10g025490 [Sorghum bicolor]
gi|241915580|gb|EER88724.1| hypothetical protein SORBIDRAFT_10g025490 [Sorghum bicolor]
Length = 111
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 63/91 (69%), Gaps = 6/91 (6%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLY-NVTTCSQAAVALDILRERKGC---FDVVL 84
+F AGLRVL VD+D L +L+++L+ C Y NVT + + ALD+LRERK FD+V+
Sbjct: 5 RFRAGLRVLAVDEDRVNLVVLKRVLKVCDYNNVTIVADVSTALDMLRERKDGDDQFDLVI 64
Query: 85 SDVHMPD--MDGFKLLEHIGLEMDLPVIMMS 113
SD +P+ ++G K LE + +EMD+PVI +S
Sbjct: 65 SDFFIPNNGINGLKFLELVAVEMDIPVIGIS 95
>gi|411118817|ref|ZP_11391197.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoriales cyanobacterium
JSC-12]
gi|410710680|gb|EKQ68187.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoriales cyanobacterium
JSC-12]
Length = 245
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + AL+ R D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFR--NADPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|254432325|ref|ZP_05046028.1| DNA-binding response regulator [Cyanobium sp. PCC 7001]
gi|197626778|gb|EDY39337.1| DNA-binding response regulator [Cyanobium sp. PCC 7001]
Length = 253
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDD+ + RILE L Y V T S AL+ RE D+V+ DV MP +DG+
Sbjct: 16 ILVVDDEASIRRILETRLSMIGYQVVTASDGMEALECFRESHP--DLVVLDVMMPKLDGY 73
Query: 96 KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWN 155
+ + + E D+P++M++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 74 GVCQELRKESDVPIVMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRCVLRRVEK 133
Query: 156 EN 157
E
Sbjct: 134 EQ 135
>gi|428203515|ref|YP_007082104.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Pleurocapsa sp. PCC 7327]
gi|427980947|gb|AFY78547.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Pleurocapsa sp. PCC 7327]
Length = 246
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + AL++ + D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEVFHQTNP--DLVVLDVMMPKLDG 68
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 69 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|326498541|dbj|BAJ98698.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520928|dbj|BAJ92827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 219 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 278
KK +V W+ ELH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R
Sbjct: 180 KKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGINSLTRHNIASH-----LQKYRS 234
Query: 279 YLKRL 283
+ K +
Sbjct: 235 HRKHM 239
>gi|149072098|ref|YP_001293493.1| OmpR-like protein [Rhodomonas salina]
gi|134303049|gb|ABO70853.1| OmpR-like protein [Rhodomonas salina]
Length = 248
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L YNV T + AL++L++ ++++ D+ +P +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYNVVTAADGEEALNLLKKENP--NLIVLDIMIPKLDG 68
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + I E D+P+IM++A G V+ + G+ GA DY+IKP +EL+ + V+R+
Sbjct: 69 YGVCQEIRKESDVPIIMLTALGDVADRITGLELGADDYVIKPFSPKELEARIRSVLRR 126
>gi|218692285|ref|YP_002400497.1| transcriptional regulatory protein ZraR [Escherichia coli ED1a]
gi|218429849|emb|CAR10817.2| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia coli ED1a]
Length = 441
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|422379255|ref|ZP_16459451.1| response regulator receiver domain protein, partial [Escherichia
coli MS 57-2]
gi|324009494|gb|EGB78713.1| response regulator receiver domain protein [Escherichia coli MS
57-2]
Length = 425
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKKIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|146298401|ref|YP_001192992.1| two component sigma-54 specific Fis family transcriptional
regulator [Flavobacterium johnsoniae UW101]
gi|146152819|gb|ABQ03673.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Flavobacterium johnsoniae UW101]
Length = 453
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LV++DDI+ ++LE+ L + Y V+ A+ A I++ FD++L+D+ +PD DG
Sbjct: 3 KILVIEDDISFCKLLEKFLTKNKYEVSVAFSASEARAIIKNE--SFDLILTDLRLPDSDG 60
Query: 95 FKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 153
L+ E +PVI+M+ V+ ++ I++GA DY+ KP +E+ + + ++
Sbjct: 61 IGLMSEFKNEYPQVPVILMTGYSDVNTAVKAIKNGAADYISKPFNPDEVLLVITNALQTS 120
Query: 154 WNENKEHE 161
E +E E
Sbjct: 121 KEEQEEIE 128
>gi|300938770|ref|ZP_07153483.1| response regulator receiver domain protein, partial [Escherichia
coli MS 21-1]
gi|300456280|gb|EFK19773.1| response regulator receiver domain protein [Escherichia coli MS
21-1]
Length = 318
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK 143
L+ I L +PV++M+A V + ++ GA DYLIKP+ + L+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>gi|432576265|ref|ZP_19812730.1| transcriptional regulatory protein zraR [Escherichia coli KTE55]
gi|431103736|gb|ELE08373.1| transcriptional regulatory protein zraR [Escherichia coli KTE55]
Length = 193
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ +LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MD
Sbjct: 6 IDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMD 63
Query: 94 GFKLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKN 144
G L+ I L +PV++M+A + + ++ GA DYLIKP+ + L++
Sbjct: 64 GIATLKEIKTLNPAIPVLIMTAYSSIETAVEALKTGALDYLIKPLDFDNLQS 115
>gi|434397268|ref|YP_007131272.1| two component transcriptional regulator, winged helix family
[Stanieria cyanosphaera PCC 7437]
gi|428268365|gb|AFZ34306.1| two component transcriptional regulator, winged helix family
[Stanieria cyanosphaera PCC 7437]
Length = 246
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + AL+ R + D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRVAEP--DLVVLDVMMPKLDG 68
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 69 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|328875568|gb|EGG23932.1| cAMP phosphodiesterase [Dictyostelium fasciculatum]
Length = 851
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P+ + +LVVDDD +ILE L++ YNVT + A +IL +D+VL+DV MP
Sbjct: 178 PSKVHILVVDDDQVQRKILESALKKFKYNVTVVTNGEEAWNILINGNTKYDLVLTDVMMP 237
Query: 91 DMDGFKLLEHIGLEMDL---PVIMMSADG-RVSAVMRGIRHGACDYLIKPIREEELK 143
++ GF LL+ I ++ PVI+MS I+ G D+L KPI +E LK
Sbjct: 238 NISGFDLLQRINDHAEIKNVPVILMSGTAIDYKYANDTIKIGGQDFLTKPIAKELLK 294
>gi|299534051|ref|ZP_07047403.1| CheA signal transduction histidine kinase [Comamonas testosteroni
S44]
gi|298717960|gb|EFI58965.1| CheA signal transduction histidine kinase [Comamonas testosteroni
S44]
Length = 2186
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 80/148 (54%), Gaps = 16/148 (10%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
SGG+ + AA VP VLVVDD IT R+ +++L+R Y VT + A+
Sbjct: 2027 SGGADLLGAEAAQTTVP-------LVLVVDDSITVRRVTQRLLQREGYRVTLAADGLQAM 2079
Query: 71 DILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRH 127
+ L++ + VLSD+ MP MDGF LL +I + L PV+M+++ R++ R +
Sbjct: 2080 ERLQDERPTL--VLSDIEMPRMDGFDLLRNIRADQTLEGMPVVMITS--RIAQKHREMAR 2135
Query: 128 --GACDYLIKPIREEELKNIWQHVVRKR 153
GA YL KP +EEL + QH +R
Sbjct: 2136 DLGANHYLGKPYSDEELLGLIQHYALQR 2163
>gi|419702868|ref|ZP_14230451.1| transcriptional regulatory protein ZraR [Escherichia coli SCI-07]
gi|432730326|ref|ZP_19965191.1| transcriptional regulatory protein zraR [Escherichia coli KTE45]
gi|432761871|ref|ZP_19996345.1| transcriptional regulatory protein zraR [Escherichia coli KTE46]
gi|380345996|gb|EIA34301.1| transcriptional regulatory protein ZraR [Escherichia coli SCI-07]
gi|431279706|gb|ELF70657.1| transcriptional regulatory protein zraR [Escherichia coli KTE45]
gi|431304314|gb|ELF92844.1| transcriptional regulatory protein zraR [Escherichia coli KTE46]
Length = 441
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKKIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|237727859|ref|ZP_04558340.1| transcriptional regulatory protein ZraR [Citrobacter sp. 30_2]
gi|226910416|gb|EEH96334.1| transcriptional regulatory protein ZraR [Citrobacter sp. 30_2]
Length = 441
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR Y V AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYEVALAYSGRAALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 150
L+ I L +PV++M+A V + ++ GA DYLIKP+ + L+ + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAVGALKTGALDYLIKPLDFDRLQETLEKAL 121
>gi|440753439|ref|ZP_20932642.1| response regulator [Microcystis aeruginosa TAIHU98]
gi|443651756|ref|ZP_21130689.1| response regulator [Microcystis aeruginosa DIANCHI905]
gi|440177932|gb|ELP57205.1| response regulator [Microcystis aeruginosa TAIHU98]
gi|443334397|gb|ELS48909.1| response regulator [Microcystis aeruginosa DIANCHI905]
Length = 242
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y V T + AL+ R + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEALETFRTAEP--DLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|428772622|ref|YP_007164410.1| winged helix family two component transcriptional regulator
[Cyanobacterium stanieri PCC 7202]
gi|428686901|gb|AFZ46761.1| two component transcriptional regulator, winged helix family
[Cyanobacterium stanieri PCC 7202]
Length = 248
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+LVVDD+ + RILE L Y+V T + A+ E + D+V+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYDVVTAADGEDAIATFHETQP--DLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 152
+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|326796472|ref|YP_004314292.1| Fis family transcriptional regulator [Marinomonas mediterranea
MMB-1]
gi|326547236|gb|ADZ92456.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Marinomonas mediterranea MMB-1]
Length = 450
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+++LVV+DD LE L Y+ + + A IL +K +D+V+SD+++P MD
Sbjct: 4 VKLLVVEDDRGLAEALEDTLLLAGYDCSMVGSSEEA--ILSLKKQSYDMVVSDINLPGMD 61
Query: 94 GFKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 147
G+ LL+H+ +LP+++M+A G ++ + +R GA DYL+KP E EL + Q
Sbjct: 62 GYGLLKHVTDHYPELPIMLMTAYGDIAHAVEAMREGAVDYLLKPFEEAELLEVIQ 116
>gi|387609796|ref|YP_006098652.1| two-component system response regulator [Escherichia coli 042]
gi|284924096|emb|CBG37195.1| two-component system response regulator [Escherichia coli 042]
Length = 441
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPI 137
L+ I L +PV++M+A V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.130 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,225,829,322
Number of Sequences: 23463169
Number of extensions: 431771654
Number of successful extensions: 1969215
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17958
Number of HSP's successfully gapped in prelim test: 78957
Number of HSP's that attempted gapping in prelim test: 1841385
Number of HSP's gapped (non-prelim): 123617
length of query: 668
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 519
effective length of database: 8,863,183,186
effective search space: 4599992073534
effective search space used: 4599992073534
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)