BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005942
(668 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XI07|SWI3C_ARATH SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1
SV=1
Length = 807
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/706 (58%), Positives = 498/706 (70%), Gaps = 60/706 (8%)
Query: 1 MDIVAIEAAYLAGDASGRSSAVALENISFGQLQALSVVPADSAALDPERSDTSC---VIT 57
M +VA E A L G+ G+ S ALENISFGQLQALS VPADS LD ERSD S VI+
Sbjct: 100 MAVVAAERAGLIGETRGQGSLPALENISFGQLQALSTVPADS--LDLERSDGSSSAYVIS 157
Query: 58 PPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMEC 117
PP IM+G+GVVKRFG VHVLPMHSDWF+P+TV RLERQVVP FFSGKSP+HTPE YME
Sbjct: 158 PPPIMDGEGVVKRFGDLVHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEF 217
Query: 118 RNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEPWN 176
RN IV+KY++NPEK L +SDCQGLVDGV ED R+FRFL+HWGIINYCA QS P P
Sbjct: 218 RNAIVSKYVENPEKTLTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLR 277
Query: 177 RGSYLREDSNGEVSVPSDALKSIDSLIKFDKPKCSLKVADVYSS--SCGGADFFDLDNTI 234
S +RED+NGEV+VPS AL SIDSLIKFDKP C K +VYSS S G D DLD I
Sbjct: 278 DVSDVREDTNGEVNVPSAALTSIDSLIKFDKPNCRHKGGEVYSSLPSLDG-DSPDLDIRI 336
Query: 235 RERLSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYG 294
RE L ++HCN+CS+P+P VY+QSQK+ D+LLC +CFH GRFV GHS LD++RVDP + YG
Sbjct: 337 REHLCDSHCNHCSRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYG 396
Query: 295 DIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVEV 354
D DG+ W+DQET LLLE +E+YN+NW +IA+HV +KSKAQCILHF+RLP+EDG+L+NVEV
Sbjct: 397 DQDGDNWTDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEV 456
Query: 355 PNTSRTSNSSSRDDRGGLHSTVNGDLPGAGLQEADMENRLPFSNSGNPVMALVAFLASAV 414
+ T N ++ D G S NGDLPG Q +D E +LPF S NPVMALVAFLASAV
Sbjct: 457 SGVTNTENPTNGYDHKGTDS--NGDLPGYSEQGSDTEIKLPFVKSPNPVMALVAFLASAV 514
Query: 415 GPRVAAACAHASLAALSKQMEGAGHGNRMNSENVHNRE--------EENSGVHGPWGQNG 466
GPRVAA+CAH SL+ LS+ +RM SE + +E ++ G H QNG
Sbjct: 515 GPRVAASCAHESLSVLSED-------DRMKSEGMQGKEASLLDGENQQQDGAHKTSSQNG 567
Query: 467 AEAAL-LSAEKVKAAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQF 525
AEA L +KV AA +AGL+AAATKAKLFADHEEREIQRLSANI+NHQLKR+ELKLKQF
Sbjct: 568 AEAQTPLPQDKVMAAFRAGLSAAATKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQF 627
Query: 526 AEVETLLMRECEQVEKARQRFATERTRIVSTRLG-PGGV-PSQMNLPVVAPSMVNNNIGN 583
AE+ETLLM+ECEQVEK RQRF+ ER R++S R G PGG+ P NL ++ S NNI +
Sbjct: 628 AEIETLLMKECEQVEKTRQRFSAERARMLSARFGSPGGISPQTNNLQGMSLSTGGNNINS 687
Query: 584 ----NRPQVMSASSSQPS-IPGYSANQPVHPHMQFRPQQM-------------FPLGQRM 625
Q ++++SQPS IPG+S N V M F +Q F G R+
Sbjct: 688 LMHQQHQQQQASATSQPSIIPGFSNNPQVQAQMHFMARQQQQQQQQQQQQQQAFSFGPRL 747
Query: 626 PLTSLQ--ASSSAPSNVMF--NARGGP---------QPTLNHPMIR 658
PL ++Q A S+A NVMF N P QP+ +HPM+R
Sbjct: 748 PLNAIQTNAGSTASPNVMFGNNQLNNPAAAGAASINQPSFSHPMVR 793
>sp|O14470|SSR2_SCHPO SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ssr2 PE=1 SV=3
Length = 503
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 216/491 (43%), Gaps = 111/491 (22%)
Query: 77 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 136
++P ++ WF +H +ER+ P FF+GKSP TP Y + R+ ++ Y P + L V+
Sbjct: 19 IVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVT 78
Query: 137 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPSDA 195
C+ LV V + R+ FL WG+INY +P R ++ +G V S+
Sbjct: 79 ACRRNLVGDVCA--IIRVHAFLEQWGLINY-----QIDPETRPAFRLPPISGHVQAISNT 131
Query: 196 LKSIDSLIKFDKPKCSLKVADVYSSSCGGA---DFFDLDN-------TIRERLSENHCNY 245
++ P S+ GG+ +F L+ E+ S +
Sbjct: 132 PIVTQEMLAQHPP----------PSTVGGSSSQEFVKLEEKHYSPSLNAMEQTSPKEEDE 181
Query: 246 CSQPIPAV--------------YYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAR 291
S +P V +Y + K +CP C+ +GRF + +S D++ +D A
Sbjct: 182 KSDKVPRVDKVCFTCGVNCSQTWYHNLKNKKYDICPNCYKQGRFSSSFNSSDFLCMD-AI 240
Query: 292 EYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILEN 351
++ + + WS+QET LLLE IE Y D+WN+IA HV +++K QC++HF+++P+ED
Sbjct: 241 DFNHDEEKPWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIED----- 295
Query: 352 VEVPNTSRTSNSSSRDDRGGLHSTVNGDLPGAGLQEADMENRLPFSNSGNPVMALVAFLA 411
P + S +G LPF + NPV++ + +LA
Sbjct: 296 ---PYRQKLQGDFSPFKKGF----------------------LPFDENENPVLSTLTYLA 330
Query: 412 SAVGPRVAAACAHASLAALSKQMEGAGHGNRMNSENVHNREEE--NSGVHGPWGQNGAEA 469
S V G R +E+V E NS P
Sbjct: 331 SIV---------------------QQGMKERKQNESVKQGETSFGNSEFKNP-------- 361
Query: 470 ALLSAEKVKAAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVE 529
++ A L +AA KAKL A E R+++RL ++I QL++L+LK+K ++E
Sbjct: 362 -------LERVAYYALKSAAQKAKLIAAFENRQLRRLVFSLIQAQLEKLQLKMKVLEQLE 414
Query: 530 TLLMRECEQVE 540
+ E +++
Sbjct: 415 KMCSLELSELD 425
>sp|Q8VY05|SWI3D_ARATH SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1
SV=3
Length = 985
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 170/318 (53%), Gaps = 24/318 (7%)
Query: 67 VVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYM 126
++ S VHV+P H WFS + +H LE + +P FF+GK T E Y E RN I+ K+
Sbjct: 136 AIRSRDSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFH 195
Query: 127 DNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLRE-DS 185
NP ++ + D L G S E + FL++WG+IN+ P + GS + D
Sbjct: 196 SNPNIQIELKDLTELEVGDS-EAKQEVMEFLDYWGLINF----HPFPPTDTGSTASDHDD 250
Query: 186 NGEVSVPSDALKSIDSLIKF--DKPKCSLKVADVYSSSCGGADFFDLDNTIRERLS---- 239
G D ++SL +F D+ L +++ + F E L
Sbjct: 251 LG------DKESLLNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGP 304
Query: 240 --ENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDID 297
E HCN CS Y K+ D LC ECF+ G+F + SS D+I ++PA G
Sbjct: 305 AVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGS 364
Query: 298 GETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVEV--P 355
G+ W+DQET LLLE +E++ +NWNEIAEHV+TK+KAQC+LHF+++P+ED L+ ++ P
Sbjct: 365 GK-WTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDP 423
Query: 356 NTSRTSN-SSSRDDRGGL 372
+ T++ + S+DD L
Sbjct: 424 ISKDTTDLAVSKDDNSVL 441
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 475 EKVKAAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETLLMR 534
EK+K AA + ++AAA KAK A EE +I++LS ++I QL +LE KL F E E+L MR
Sbjct: 829 EKLKRAAISAISAAAVKAKNLAKQEEDQIRQLSGSLIEKQLHKLEAKLSIFNEAESLTMR 888
Query: 535 ECEQVEKARQRFATERTRIVSTRLG-PGGVPSQMNLPV 571
EQ+E++RQR ER +I++ RLG P + S+ +LP
Sbjct: 889 VREQLERSRQRLYHERAQIIAARLGVPPSMSSKASLPT 926
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 391 ENRLPFSNSGNPVMALVAFLASAVGPRVAAACAHASLAAL 430
E F++ GNPVM L AFL G VA A A AS+ +L
Sbjct: 535 EASFSFADLGNPVMGLAAFLVRLAGSDVATASARASIKSL 574
>sp|Q8W475|SWI3A_ARATH SWI/SNF complex subunit SWI3A OS=Arabidopsis thaliana GN=SWI3A PE=1
SV=1
Length = 512
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 136/527 (25%), Positives = 241/527 (45%), Gaps = 77/527 (14%)
Query: 75 VHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLI 134
++ +P S WF D +H +ER+ FF+ S TP+ Y E R+ I+ K+ ++ +RL
Sbjct: 12 LYTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRLT 71
Query: 135 VSDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGE------ 188
+ + + G L ++F FL WG+IN+ ++++ + +L N +
Sbjct: 72 FTSVRKFLVG-DVNLLQKVFLFLEKWGLINFSSSLK------KNDHLLSVDNAKIEQGTP 124
Query: 189 ----VSVPSDALKSIDS--LIKFDKPKCSLKVADVYSSSCGGADFFDLDNTIRERLSENH 242
V+ ++L+ I + L++ ++ + +KV + S S +D D+ +
Sbjct: 125 AGIRVTATPNSLRPITAPPLVE-ERVETGIKVPPLTSYSDVFSDLKKPDHVLV------- 176
Query: 243 CNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWS 302
C +C + + +YQ K + V +C +CF G + +++ D+ + G+ W+
Sbjct: 177 CAHCGERCDSPFYQHNKGI-VNICEKCFKNGNYGENNTADDFKLI------GNSAAAVWT 229
Query: 303 DQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGIL------------- 349
++E LLLE + + D+W I++ VSTKS+ CI + LP + ++
Sbjct: 230 EEEILLLLESVLKHGDDWELISQSVSTKSRLDCISKLIELPFGEFLMGSASGRLNPSILT 289
Query: 350 --ENVEVPNTSRTSNSSSRDDRGGLHSTVNGDLPGAGLQEADMENRLPFSNSGNPVMALV 407
EN E T + R VN D P A + + S + +M V
Sbjct: 290 EDENTEQVQTD-GQEHEETETREEKEDRVNEDEPPAKRKRVAL-----ISEGDSSLMKQV 343
Query: 408 AFLASAVGPRVAAA---------CAHASLAALSKQMEGAGHGN----RMNSENVHNREEE 454
A +AS VGP VA A C AS + + + N R N E + EE+
Sbjct: 344 AAMASKVGPSVATAAAKAALAALCDEASCP--KEIFDTDDYSNFTVDRANGEKDTDMEEQ 401
Query: 455 NSGVHGPWGQNGAEAALLSAEKVKAAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQ 514
GP G L A +++A+ L AAA +AK+ AD EERE+++L+A +I Q
Sbjct: 402 QEEKDGPQG-------LPVALRIRASVATALGAAAAQAKILADQEEREMEQLAATVIEQQ 454
Query: 515 LKRLELKLKQFAEVETLLMRECEQVEKARQRFATERTRIVSTRLGPG 561
LK+L+ KLK ++E+++ E + +E ++ ER ++ G
Sbjct: 455 LKKLQSKLKFLDDLESIMDEEEKVIEGVKETIIQERVSVLQCAFRSG 501
>sp|O13788|SSR1_SCHPO SWI/SNF and RSC complexes subunit ssr1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ssr1 PE=1 SV=1
Length = 527
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 207/505 (40%), Gaps = 98/505 (19%)
Query: 78 LPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVSD 137
+P + WF VH +E++ P FF GK+ TPE Y E R+ +++ + N + L +
Sbjct: 54 VPEWAQWFDFSKVHEIEKKQNPEFFDGKNTSKTPEVYKEYRDFMISTFRLNSKVYLTFTA 113
Query: 138 C-QGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPSDA- 195
C + L V + R+ RFL WG+INY P R S + S + +D
Sbjct: 114 CRRNLAGDVCA--VLRVHRFLEQWGLINYNV-----NPDTRPSKIGPPSTSHFQILADTP 166
Query: 196 LKSIDSLIKFDKPKCSLKVADVYSSSCGGADFFD--LDNTIRER------------LSEN 241
+ L K + S + +D LD+ ++ + L EN
Sbjct: 167 RGLVPLLPPPSSSIPRSKAVTIEDPSIVRTNIYDPSLDDVLKGKGSTPNQKPSLSNLHEN 226
Query: 242 ---------HCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPARE 292
HC C YYQSQ +C C+ + RF + + DY V A +
Sbjct: 227 NIDQSDSPQHCYCCGNKFNESYYQSQTAQKYNVCISCYQQNRFPSPTTIADYKEV--AIQ 284
Query: 293 YGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENV 352
D +TW+ QE LL EG+EMY+D+W ++A HV+TKS +CIL F+ LP D L +
Sbjct: 285 NKIEDDDTWTAQELVLLSEGVEMYSDDWAKVASHVNTKSVEECILKFLNLPSSDKALFKM 344
Query: 353 EVPNTSRTSNSSSRDDRGGLHSTVNGDLPGAGLQEADMENRLPFSNSGNPVMALVAFLAS 412
+ +T+ +S L G NP++++V+FLA
Sbjct: 345 DKVHTNPVVDS----------------LQG-----------------KNPILSVVSFLAK 371
Query: 413 AVGPRVAAACAHASLAALSKQMEGAGHGNRMNSENVHNREEENSGVHGPWGQNGAEAALL 472
V P + A +EEE+ V G E+
Sbjct: 372 MVPPSSFTQKSSA-------------------------KEEESDKVKGESVYPKPESESY 406
Query: 473 SAEKVKAAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETLL 532
E L + + ++L+ +EE+++ + + +N Q+K +E KL F ++ +
Sbjct: 407 DVE----MNGKSLEDSDSLSELYLTNEEKKMASIIKDSVNVQIKLIESKLSHFDYLDQHI 462
Query: 533 MRECEQVEKARQRFATERTRIVSTR 557
+ ++++ Q AT R ++ R
Sbjct: 463 RLKSQELDAFAQ--ATYREKLYMKR 485
>sp|Q84JG2|SWI3B_ARATH SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana GN=SWI3B PE=1
SV=1
Length = 469
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 211/486 (43%), Gaps = 87/486 (17%)
Query: 75 VHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLI 134
+HV P +S WFS ++ E + +P FF +S P+ Y+ RN I+ +Y D+ +++
Sbjct: 48 IHV-PSYSSWFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKIS 106
Query: 135 VSDCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPS 193
+D + LV V + R+F FL+ WG+INY ++ S +P
Sbjct: 107 FTDVRRTLVSDVVS--IRRVFDFLDSWGLINYNSSA-SAKP------------------- 144
Query: 194 DALKSIDSLIKFDKPKCSLKVADVYSSSCGGADFFDLDNTIRERLSENHCNYCSQPIPAV 253
+K+++ + D S T++E N CN C + I ++
Sbjct: 145 ---------LKWEEKEAGKSAGDAASEPA---------TTVKETAKRN-CNGC-KAICSI 184
Query: 254 YYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWSDQETFLLLEGI 313
+ + D+ LC C+ + G +S ++ RV+ + E WSD+E LLLE +
Sbjct: 185 ACFACDKYDLTLCARCYVRSNYRVGINSSEFKRVEISEE----SKPEWSDKEILLLLEAV 240
Query: 314 EMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVEVPNTSRTSNSSSRDDRGGLH 373
Y D+W ++A HV +++ C+ FV+LP + ++ S S D
Sbjct: 241 MHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVK-----------ESDSEDGLEMFD 289
Query: 374 STVNGDLP---GAGLQEADMENRL---PFSNSGNPVMALVAFLASAVGPRVAAACAHASL 427
+ D+P G + R+ P +++ NP+MA AFL++ G VA A A A++
Sbjct: 290 QIKDSDIPESEGIDKDGSSPNKRIKLTPLADASNPIMAQAAFLSALAGTNVAEAAARAAV 349
Query: 428 AALSKQMEGAGHGNRMNSENVHNREEENSGVHGPWGQNGAEAALLSAEKVKAAAKAGLAA 487
ALS + N+ NR++ N+ G +N +E A
Sbjct: 350 RALS----DVDYEADKNASRDPNRQDANAASSGETTRNESERAW---------------- 389
Query: 488 AATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETLLMRECEQVEKARQRFA 547
AK + EE E++ + ++K++ ++ F +++ + R +Q+E+ R
Sbjct: 390 --ADAKSLIEKEEHEVEGAIKETVEVEMKKIRDRIVHFEKLDLEMERSRKQLEEVRNLLF 447
Query: 548 TERTRI 553
++ I
Sbjct: 448 VDQLNI 453
>sp|P43609|RSC8_YEAST Chromatin structure-remodeling complex protein RSC8
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC8 PE=1 SV=1
Length = 557
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 136/311 (43%), Gaps = 30/311 (9%)
Query: 77 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 136
++P + WF +H +E++ P FF+ S TP+ Y + RN I+ Y +P + L ++
Sbjct: 81 IIPSFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINTYRLSPYEYLTIT 140
Query: 137 DCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPSDAL 196
+ V + + +I FL WG+INY +P + S + G V D
Sbjct: 141 AVRRNV-AMDVASIVKIHAFLEKWGLINY-----QIDPRTKPSLIGPSFTGHFQVVLDTP 194
Query: 197 KSIDSLIKFDKPKCSLKVAD-------------------VYSSSCGGADFFDLDNTIRER 237
+ + + + K ++ D VY S+ D R+
Sbjct: 195 QGLKPFLPENVIKQEVEGGDGAEPQVKKEFPVNLTIKKNVYDSAQDFNALQDESRNSRQI 254
Query: 238 LSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDID 297
C+ C V Y + + D LC CF EG F S D+IR++ G+
Sbjct: 255 HKVYICHTCGNESINVRYHNLRARDTNLCSRCFQEGHFGANFQSSDFIRLENN---GNSV 311
Query: 298 GETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQ-CILHFVRLPMEDGILENVEVPN 356
+ WSDQE LLLEGIEMY D W +IA+HV + + CI F+ LP+ED + V V +
Sbjct: 312 KKNWSDQEMLLLLEGIEMYEDQWEKIADHVGGHKRVEDCIEKFLSLPIEDNYIREV-VGS 370
Query: 357 TSRTSNSSSRD 367
T SRD
Sbjct: 371 TLNGKGGDSRD 381
>sp|Q54J55|MYBX_DICDI Myb-like protein X OS=Dictyostelium discoideum GN=mybX PE=3 SV=1
Length = 1620
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 108/239 (45%), Gaps = 58/239 (24%)
Query: 200 DSLIKFDKP--KCSLKVADVYSSSCGGADFFDLDNTIRERLSENHCNYCSQPIPAVYYQS 257
D LIK KP +C AD C +R +L N +P +Y
Sbjct: 851 DQLIKKKKPLFECKKCKAD-----CSN---------VRYQLVNNSTALDGNILPEYFYP- 895
Query: 258 QKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAR--EYGDIDGETWSDQETFLLLEGIEM 315
+++C CF G + S + R++ + E+G W+D ET LLLEGIE+
Sbjct: 896 -----MIICVNCFSSGNYENFIQSSSFQRIEQHQPEEFG------WTDIETLLLLEGIEI 944
Query: 316 YNDNWNEIAEHV-STKSKAQCILHFVRLPMEDGILENVEVPNTSRTSNSSSRDDRGGLHS 374
+ DNW EI++++ +K+ QC+ HF+RLP+ED LE R +S
Sbjct: 945 FRDNWQEISDYIGGSKTPEQCLTHFIRLPIEDEFLE--------RKISS----------- 985
Query: 375 TVNGDLPGAGLQEADMENRLPFSNS---GNPVMALVAFLASAVGPRVAAACAHASLAAL 430
P L + ++++ PFS + NP+M+LVAF +S P + + A+ L
Sbjct: 986 -----FPVGSLSKKEIDSNNPFSITYGVNNPIMSLVAFFSSYSQPPLGLLASKAAKVIL 1039
>sp|Q6PDG5|SMRC2_MOUSE SWI/SNF complex subunit SMARCC2 OS=Mus musculus GN=Smarcc2 PE=1
SV=2
Length = 1213
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 30/121 (24%)
Query: 315 MYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVEVPNTSRTSNSSSRDDRGGLHS 374
MY D+WN+++EHV ++++ +CILHF+RLP+ED LE+ E G L
Sbjct: 615 MYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEA-------------SLGPL-- 659
Query: 375 TVNGDLPGAGLQEADMENRLPFSNSGNPVMALVAFLASAVGPRVAAACAHASLAALSKQM 434
+PFS SGNPVM+ VAFLAS V PRVA+A A ++L SK
Sbjct: 660 ---------------AYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMK 704
Query: 435 E 435
E
Sbjct: 705 E 705
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 77 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 136
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 137 DCQGLVDGVSPEDLTRIFR---FLNHWGIINYCAAVQS 171
C+ + G D+ I R FL WG+INY +S
Sbjct: 485 ACRRNLAG----DVCAIMRVHAFLEQWGLINYQVDAES 518
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 444 NSENVHNREEENSGVHGPWGQNGAEAALLSAE-KVKAAAKAGLAAAATKAKLFADHEERE 502
+ E +EE V P G+ + E + AA A LAAAA KAK A EER+
Sbjct: 824 DKEPTEGQEEVLKEVAEPEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERK 883
Query: 503 IQRLSANIINHQLKRLELKLKQFAEVETLLMRECEQVEKARQRFATER 550
I+ L A ++ Q+K+LE+KL+ F E+ET++ RE E +E RQ+ +R
Sbjct: 884 IKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR 931
>sp|Q8TAQ2|SMRC2_HUMAN SWI/SNF complex subunit SMARCC2 OS=Homo sapiens GN=SMARCC2 PE=1
SV=1
Length = 1214
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 30/121 (24%)
Query: 315 MYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVEVPNTSRTSNSSSRDDRGGLHS 374
MY D+WN+++EHV ++++ +CILHF+RLP+ED LE+ E G L
Sbjct: 615 MYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEA-------------SLGPL-- 659
Query: 375 TVNGDLPGAGLQEADMENRLPFSNSGNPVMALVAFLASAVGPRVAAACAHASLAALSKQM 434
+PFS SGNPVM+ VAFLAS V PRVA+A A ++L SK
Sbjct: 660 ---------------AYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMK 704
Query: 435 E 435
E
Sbjct: 705 E 705
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 77 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 136
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 137 DCQGLVDGVSPEDLTRIFR---FLNHWGIINYCAAVQS 171
C+ + G D+ I R FL WG+INY +S
Sbjct: 485 ACRRNLAG----DVCAIMRVHAFLEQWGLINYQVDAES 518
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 499 EEREIQRLSANIINHQLKRLELKLKQFAEVETLLMRECEQVEKARQRFATER 550
EER+I+ L A ++ Q+K+LE+KL+ F E+ET++ RE E +E RQ+ +R
Sbjct: 880 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR 931
>sp|P32591|SWI3_YEAST SWI/SNF complex subunit SWI3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SWI3 PE=1 SV=1
Length = 825
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 50/252 (19%)
Query: 299 ETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVEVPNTS 358
E WS ++ LL+GI+ + +W ++A++V KS QCIL F++LP+ED L
Sbjct: 525 ENWSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPEQCILRFLQLPIEDKFL--------- 575
Query: 359 RTSNSSSRDDRGGLHSTVNGDLPGAGLQEADMENRLPFSNSGNPVMALVAFLASAVGPRV 418
+ D+ GL G L A LPFS S NPV++ +AFL V P+
Sbjct: 576 YGDGNGKGDNDNGL-----GPLKYAP--------HLPFSKSENPVLSTIAFLVGLVNPKT 622
Query: 419 AAACAHASLAALSKQMEGAGHGNRMNSENVHNREEENSGVHGPWGQNGAEAALLSAEKVK 478
+ ++ + +E++ +++EE S P E +K
Sbjct: 623 VQSMTQRAIQS---------------AESIKSQKEEISD-QKP------------IEHIK 654
Query: 479 AAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETLLMRECEQ 538
++ +++ ++ +FA +EER++ L+ +I Q+++L+ KL ++E + E +
Sbjct: 655 EGSEIAISSLGYRSHIFATNEERQMNFLTNELIRLQMEKLDAKLNHLKKLEKFMELERKT 714
Query: 539 VEKARQRFATER 550
+E+ ++ +R
Sbjct: 715 LERQQENLLIQR 726
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 77 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 136
V+P +S WF+ + +H +E Q +P FF+ + P TPE YM RN +V Y NP + V+
Sbjct: 306 VIPSYSKWFNLEKIHSIEVQSLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVT 365
Query: 137 DCQGLVDGVSPEDLTRIFRFLNHWGIINY 165
+ V G + L R+ +FL WG+INY
Sbjct: 366 TARRNVSGDAAA-LFRLHKFLTKWGLINY 393
>sp|P97496|SMRC1_MOUSE SWI/SNF complex subunit SMARCC1 OS=Mus musculus GN=Smarcc1 PE=1
SV=2
Length = 1104
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 30/152 (19%)
Query: 284 YIRVDPAREYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLP 343
Y + A+ G G W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP
Sbjct: 605 YSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLP 664
Query: 344 MEDGILENVEVPNTSRTSNSSSRDDRGGLHSTVNGDLPGAGLQEADMENRLPFSNSGNPV 403
+ED LEN + L Q +PFS SGNPV
Sbjct: 665 IEDPYLEN------------------------SDASLGPLAYQP------VPFSQSGNPV 694
Query: 404 MALVAFLASAVGPRVAAACAHASLAALSKQME 435
M+ VAFLAS V PRVA+A A A+L S+ E
Sbjct: 695 MSTVAFLASVVDPRVASAAAKAALEEFSRVRE 726
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 13/123 (10%)
Query: 46 DPERSDTSCVITPPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGK 105
DP + D S + P G+ V + + ++P ++ WF + +H +ER+ +P FF+GK
Sbjct: 424 DPSKGDPSRSVDP-----GEDNVTEQTNHI-IIPSYASWFDYNCIHVIERRALPEFFNGK 477
Query: 106 SPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFR---FLNHWGI 162
+ TPE Y+ RN ++ Y NP++ L + C+ + G D+ + R FL WG+
Sbjct: 478 NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTG----DVCAVMRVHAFLEQWGL 533
Query: 163 INY 165
+NY
Sbjct: 534 VNY 536
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 499 EEREIQRLSANIINHQLKRLELKLKQFAEVETLLMRECEQVEKARQRFATER 550
EER+I+ L A ++ Q+K+LE+KL+ F E+ET++ RE E +E+ RQ+ TER
Sbjct: 887 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTER 938
>sp|Q92922|SMRC1_HUMAN SWI/SNF complex subunit SMARCC1 OS=Homo sapiens GN=SMARCC1 PE=1
SV=3
Length = 1105
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 87/152 (57%), Gaps = 30/152 (19%)
Query: 284 YIRVDPAREYGDIDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRLP 343
Y + A+ G G W++QET LLLE +EMY D+WN+++EHV ++++ +CILHF+RLP
Sbjct: 606 YSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLP 665
Query: 344 MEDGILENVEVPNTSRTSNSSSRDDRGGLHSTVNGDLPGAGLQEADMENRLPFSNSGNPV 403
+ED LEN S++S L Q +PFS SGNPV
Sbjct: 666 IEDPYLEN---------SDAS---------------LGPLAYQP------VPFSQSGNPV 695
Query: 404 MALVAFLASAVGPRVAAACAHASLAALSKQME 435
M+ VAFLAS V PRVA+A A A+L S+ E
Sbjct: 696 MSTVAFLASVVDPRVASAAAKAALEEFSRVRE 727
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 77 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 136
++P ++ WF + +H +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 450 IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 509
Query: 137 DCQGLVDGVSPEDLTRIFR---FLNHWGIINY 165
C+ + G D+ + R FL WG++NY
Sbjct: 510 ACRRNLTG----DVCAVMRVHAFLEQWGLVNY 537
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 499 EEREIQRLSANIINHQLKRLELKLKQFAEVETLLMRECEQVEKARQRFATER 550
EER+I+ L A ++ Q+K+LE+KL+ F E+ET++ RE E +E+ RQ+ TER
Sbjct: 888 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTER 939
>sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2 OS=Oryza sativa subsp. japonica
GN=ADA2 PE=2 SV=2
Length = 567
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 242 HCNYCSQPIPA-VYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGET 300
HCNYC++ I + + K D LC ECF G VT H S RV + I
Sbjct: 52 HCNYCNKDISGKIRIKCSKCPDFDLCVECFSVGAEVTPHRSNHPYRVMDNLSFPLI-CPD 110
Query: 301 WSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCILHFVRLPM 344
W+ E LLLEGIEMY NW E+AEHV TK+KAQCI H+ M
Sbjct: 111 WNADEEILLLEGIEMYGLGNWAEVAEHVGTKTKAQCIDHYTTAYM 155
>sp|Q9ATB4|TAD2B_ARATH Transcriptional adapter ADA2b OS=Arabidopsis thaliana GN=ADA2B PE=1
SV=1
Length = 487
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 242 HCNYCSQPIPA-VYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDID--- 297
+C+YC + I + + D LC EC G +T H D+ P R G++
Sbjct: 46 NCDYCQKDITGKIRIKCAVCPDFDLCIECMSVGAEITPHKC-DH----PYRVMGNLTFPL 100
Query: 298 -GETWSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCILHFVRLPMEDGILENVEVP 355
WS + LLLEG+E+Y NW E+AEHV TKSK QC+ H+ + + +P
Sbjct: 101 ICPDWSADDEMLLLEGLEIYGLGNWAEVAEHVGTKSKEQCLEHYRNIYLNSPFF---PLP 157
Query: 356 NTSRTSNSSSRDDRGGLHSTVNGDLPGAGLQEADMENRLPFS 397
+ S + +R L + G + E +M+ PFS
Sbjct: 158 DMSHVAGK----NRKELQAMAKGRIDDKK-AEQNMKEEYPFS 194
>sp|Q9SFD5|TAD2A_ARATH Transcriptional adapter ADA2a OS=Arabidopsis thaliana GN=ADA2A PE=1
SV=1
Length = 548
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 243 CNYCSQPIPA-VYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETW 301
CNYC + + V ++ +D LC ECF G + H + RV + + + W
Sbjct: 53 CNYCDKDLSGLVRFKCAVCMDFDLCVECFSVGVELNRHKNSHPYRVMDNLSFSLVTSD-W 111
Query: 302 SDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCILHF 339
+ E LLLE I Y NW E+A+HV +K+ +CI HF
Sbjct: 112 NADEEILLLEAIATYGFGNWKEVADHVGSKTTTECIKHF 150
>sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1
Length = 420
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 238 LSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLD-YIRVDPAR--EYG 294
L + +C YC + + ++ + D+ LCPECF G + H Y VD R +G
Sbjct: 4 LGKKYCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWG 63
Query: 295 DIDGETWSDQETFLLLEGIEMYN-DNWNEIAEHV-STKSKAQCILHFVRLPMEDGILENV 352
W+ +E LLL+ IE + NW ++A HV ++++ + + H+V + + G L
Sbjct: 64 PEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIH-GNLGKA 122
Query: 353 EVPNT 357
+P+T
Sbjct: 123 CIPDT 127
>sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2
Length = 420
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 238 LSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLD-YIRVDPAR--EYG 294
L + +C YC + + ++ + D+ LCPECF G + H Y VD R +G
Sbjct: 4 LGKKYCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWG 63
Query: 295 DIDGETWSDQETFLLLEGIEMYN-DNWNEIAEHV-STKSKAQCILHFVRLPMEDGILENV 352
W+ +E LLL+ IE + NW ++A HV ++++ + + H+V + + G L
Sbjct: 64 PEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIH-GNLGKA 122
Query: 353 EVPNT 357
+P+T
Sbjct: 123 CIPDT 127
>sp|Q9P7J7|ADA2_SCHPO Transcriptional adapter 2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ada2 PE=1 SV=1
Length = 437
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 242 HCNYCSQPIP-AVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGET 300
HCN C+Q I +++ + + VD LC CF G + H R+ Y D E
Sbjct: 7 HCNVCAQDITRSIHIRCVECVDFDLCIPCFTSGASLGTHHPSHPYRIIETNSYPIFD-EN 65
Query: 301 WSDQETFLLLEGIEMYN-DNWNEIAEHV-STKSKAQCILHFVRLPMEDGI--LENVEVP 355
W E LL++ E NW +IA++V + ++K +C H+++ +E L +VE+P
Sbjct: 66 WGADEELLLIDACETLGLGNWADIADYVGNARTKEECRDHYLKTYIESDCYPLASVELP 124
>sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2
SV=1
Length = 420
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 238 LSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLD-YIRVDPAR--EYG 294
LS+ +C YC + ++ + + D+ LC +CF G + H Y VD R +G
Sbjct: 4 LSKKYCVYCLADVTSLRLRCTECQDIELCTDCFSAGAEIGNHRRWHGYQLVDGGRFTLWG 63
Query: 295 DIDGETWSDQETFLLLEGIEMYN-DNWNEIAEHV-STKSKAQCILHFVRL 342
W+ +E LLL+ IE + NW ++A HV ++++ + + H+V +
Sbjct: 64 PEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPTEVMEHYVTM 113
>sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1
Length = 486
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 238 LSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLD-YIRVDPAR--EYG 294
L + +C C + + + + D+ LCPECF G + H Y +VD R +G
Sbjct: 4 LGKKYCVNCLADVTNLRIRCAECQDIELCPECFSAGAEIGNHRRWHGYQQVDGGRFSLWG 63
Query: 295 DIDGETWSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCIL-HFVRL 342
W+ +E LL+ IE Y NW ++A HV Q ++ H+V +
Sbjct: 64 PEAEGGWTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSM 113
>sp|Q6AYE3|TAD2A_RAT Transcriptional adapter 2-alpha OS=Rattus norvegicus GN=Tada2a PE=2
SV=1
Length = 443
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 13/139 (9%)
Query: 263 VLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWSDQETFLLLEGI-EMYNDNWN 321
LC +CF G H S D+ ++ +D +W+ QE LLE + + NW
Sbjct: 39 FFLCLQCFTRGFEYKKHQS-DHTYEIMTSDFPVLDP-SWTAQEEMALLEAVMDCGFGNWQ 96
Query: 322 EIAEHVSTKSKAQC----ILHFVRLPMEDGILENVEVPNTSRTSNSS----SRDD--RGG 371
++A + TK+K +C + HF+ P+ L N++ ++T++++ S DD R
Sbjct: 97 DVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQAEAAKTADTAIPFHSADDPPRPA 156
Query: 372 LHSTVNGDLPGAGLQEADM 390
S ++ D+ G AD
Sbjct: 157 FDSLLSRDMAGYMPARADF 175
>sp|Q8I8V0|TAD2B_DROME Transcriptional adapter 2B OS=Drosophila melanogaster GN=Ada2b PE=1
SV=1
Length = 555
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 71/184 (38%), Gaps = 13/184 (7%)
Query: 233 TIRERLSENHCNYCSQPIPAVYYQSQKEVDVLLCPECFHEGRFVTGH-SSLDYIRVDPAR 291
TI + ++ +C C I + + + LC +CF G + H ++ Y +D
Sbjct: 3 TIADLFTKYNCTNCQDDIQGIRVHCAECENFDLCLQCFAAGAEIGAHQNNHSYQFMDTGT 62
Query: 292 EYGDI--DGETWSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCILHFVRLPMEDGI 348
+ W+ +E LL+ IE Y NW +I++H+ TKS +V + I
Sbjct: 63 SILSVFRGKGAWTAREEIRLLDAIEQYGFGNWEDISKHIETKSAEDAKEEYVNKFVNGTI 122
Query: 349 LENVEVPNTS---RTSNSSSRDDRGGLHSTVNGDLP------GAGLQEADMENRLPFSNS 399
P S R + + DD G L + LP +Q M NR F
Sbjct: 123 GRATWTPAQSQRPRLIDHTGDDDAGPLGTNALSTLPPLEINSDEAMQLGYMPNRDSFERE 182
Query: 400 GNPV 403
+P
Sbjct: 183 YDPT 186
>sp|O75478|TAD2A_HUMAN Transcriptional adapter 2-alpha OS=Homo sapiens GN=TADA2A PE=1 SV=3
Length = 443
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 13/139 (9%)
Query: 263 VLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWSDQETFLLLEGI-EMYNDNWN 321
LC +CF G H S D+ ++ +D +W+ QE LLE + + NW
Sbjct: 39 FFLCLQCFTRGFEYKKHQS-DHTYEIMTSDFPVLDP-SWTAQEEMALLEAVMDCGFGNWQ 96
Query: 322 EIAEHVSTKSKAQC----ILHFVRLPMEDGILENVEVPNTSRTSNSS----SRDD--RGG 371
++A + TK+K +C + HF+ P+ L N++ ++T++++ S DD R
Sbjct: 97 DVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPT 156
Query: 372 LHSTVNGDLPGAGLQEADM 390
S ++ D+ G AD
Sbjct: 157 FDSLLSRDMAGYMPARADF 175
>sp|Q3SZP8|TAD2A_BOVIN Transcriptional adapter 2-alpha OS=Bos taurus GN=TADA2A PE=2 SV=1
Length = 443
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 13/139 (9%)
Query: 263 VLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWSDQETFLLLEGI-EMYNDNWN 321
LC +CF G H S D+ ++ +D +W+ QE LLE + + NW
Sbjct: 39 FFLCLQCFTRGFEYKKHQS-DHTYEIMTSDFPVLDP-SWTAQEEMALLEAVMDCGFGNWQ 96
Query: 322 EIAEHVSTKSKAQC----ILHFVRLPMEDGILENVEVPNTSRTSNSS----SRDD--RGG 371
++A + TK+K +C + HF+ P+ L N++ ++T++++ S DD R
Sbjct: 97 DVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQAEEAKTADTAIPFHSADDPPRPT 156
Query: 372 LHSTVNGDLPGAGLQEADM 390
S ++ D+ G AD
Sbjct: 157 FDSLLSRDMAGYMPARADF 175
>sp|Q02336|ADA2_YEAST Transcriptional adapter 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ADA2 PE=1 SV=1
Length = 434
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 19/127 (14%)
Query: 242 HCNYCSQPIPAVYYQSQKEVDVLLCPE------CFHEGRFVTGHSSLDYIRVDPAREYGD 295
HC+ CS ++ V +CPE CF +G + H R+ Y
Sbjct: 6 HCDVCSADCT-----NRVRVSCAICPEYDLCVPCFSQGSYTGKHRPYHDYRIIETNSYP- 59
Query: 296 IDGETWSDQETFLLLEGIEMYN-DNWNEIAEHVSTKSKAQCILHFVRLPMED------GI 348
I W E L++G + NW +IA+H+ ++ K + H+++ +E I
Sbjct: 60 ILCPDWGADEELQLIKGAQTLGLGNWQDIADHIGSRGKEEVKEHYLKYYLESKYYPIPDI 119
Query: 349 LENVEVP 355
+N+ VP
Sbjct: 120 TQNIHVP 126
>sp|Q5RGA4|MYSM1_DANRE Histone H2A deubiquitinase MYSM1 OS=Danio rerio GN=mysm1 PE=2 SV=2
Length = 822
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 88 DTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQ-GLVDGVS 146
+T+ E+Q + FF G+ P TPE+Y++ RN+I+ ++ + K L + + GL +
Sbjct: 325 NTITEEEKQAISEFFEGR-PSKTPERYLKIRNYILDQWRRSKPKYLNKTSVRPGLKNCGD 383
Query: 147 PEDLTRIFRFLNHWGIINY 165
+ RI +L G IN+
Sbjct: 384 VNCIGRIHTYLELIGAINF 402
>sp|Q5ZJF3|TAD2A_CHICK Transcriptional adapter 2-alpha OS=Gallus gallus GN=TADA2A PE=2
SV=1
Length = 446
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 263 VLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWSDQETFLLLEGI-EMYNDNWN 321
LLC +CF G H S D+ ++ +D W+ QE LLE + + NW
Sbjct: 39 FLLCLQCFTRGFEYKKHQS-DHTYEIMTSDFPVLDP-NWTAQEEMALLEAVMDCGFGNWQ 96
Query: 322 EIAEHVSTKSKAQC----ILHFVRLPMEDGILENVE 353
++A + TKSK +C + HF+ P+ L N++
Sbjct: 97 DVANQMCTKSKEECEKHYMKHFINNPLFASTLLNLK 132
>sp|Q69Z66|MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 OS=Mus musculus GN=Mysm1 PE=2 SV=2
Length = 819
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 88 DTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIV-------AKYMDNPEKRLIVSDCQG 140
+ + E+Q +P FF G+ TPE+Y++ RN+I+ KY++ R + +C G
Sbjct: 375 NVIQEEEKQAIPEFFEGRQT-KTPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKNC-G 432
Query: 141 LVDGVSPEDLTRIFRFLNHWGIINY-C--AAVQSPEPWNR 177
V+ + RI +L G IN+ C A P+P ++
Sbjct: 433 DVNCIG-----RIHTYLELIGAINFGCEQAVYNRPQPLDK 467
>sp|Q5F3F2|MYSM1_CHICK Histone H2A deubiquitinase MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
SV=1
Length = 832
Score = 40.4 bits (93), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 17/94 (18%)
Query: 94 ERQVVPHFFSGKSPDHTPEKYMECRNHIV-------AKYMDNPEKRLIVSDCQGLVDGVS 146
E+Q +P FF G+ TPE+Y++ RN+I+ KY++ R + +C G V+ +
Sbjct: 392 EKQAIPEFFEGRQA-KTPERYLKIRNYILDQWERCKPKYLNKTSVRPGLKNC-GDVNCIG 449
Query: 147 PEDLTRIFRFLNHWGIINY-C--AAVQSPEPWNR 177
RI +L G IN+ C A P+P ++
Sbjct: 450 -----RIHTYLELIGAINFGCEQAVYNRPQPADK 478
>sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1
Length = 828
Score = 40.0 bits (92), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 14/85 (16%)
Query: 88 DTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIV-------AKYMDNPEKRLIVSDCQG 140
+ + E+Q +P FF G+ TPE+Y++ RN+I+ KY++ R + +C G
Sbjct: 384 NIIQEEEKQAIPEFFEGRQA-KTPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKNC-G 441
Query: 141 LVDGVSPEDLTRIFRFLNHWGIINY 165
V+ + RI +L G IN+
Sbjct: 442 DVNCIG-----RIHTYLELIGAINF 461
>sp|Q8CHV6|TAD2A_MOUSE Transcriptional adapter 2-alpha OS=Mus musculus GN=Tada2a PE=1 SV=1
Length = 443
Score = 39.7 bits (91), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 263 VLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWSDQETFLLLEGI-EMYNDNWN 321
LC +CF G H S D+ ++ +D +W+ QE LLE + + NW
Sbjct: 39 FFLCLQCFTRGFEYKKHQS-DHTYEIMTSDFPVLDP-SWTAQEEMALLEAVMDCGFGNWQ 96
Query: 322 EIAEHVSTKSKAQC----ILHFVRLPMEDGILENVE 353
++A + TK+K +C + HF+ P+ L N++
Sbjct: 97 DVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLK 132
>sp|A0JMR6|MYSM1_XENLA Histone H2A deubiquitinase MYSM1 OS=Xenopus laevis GN=mysm1 PE=2
SV=1
Length = 818
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 94 ERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQ-GLVDGVSPEDLTR 152
E+Q +P FF G+ TP++Y+ RN+I+ ++ + K L + + GL + + R
Sbjct: 362 EKQAIPEFFEGRQA-KTPDRYLRIRNYILDQWENCKPKYLNKTSVRPGLKNCGDVNCIGR 420
Query: 153 IFRFLNHWGIINY 165
I +L G IN+
Sbjct: 421 IHTYLELIGAINF 433
>sp|P92973|CCA1_ARATH Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1
Length = 608
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 299 ETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILHFVRL 342
E W+++E +E + +Y W +I EHV+TK+ Q H +
Sbjct: 25 ERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKF 68
>sp|Q60974|NCOR1_MOUSE Nuclear receptor corepressor 1 OS=Mus musculus GN=Ncor1 PE=1 SV=1
Length = 2453
Score = 36.2 bits (82), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 296 IDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQC 335
++ W+++E + +G+ + NW IA+ V TKS+AQC
Sbjct: 622 VETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQC 661
>sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2
Length = 2440
Score = 36.2 bits (82), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 296 IDGETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQC 335
++ W+++E + +G+ + NW IA+ V TKS+AQC
Sbjct: 623 VETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQC 662
>sp|Q6R0H1|LHY_ARATH Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2
Length = 645
Score = 36.2 bits (82), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 299 ETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILH----FVRLPME 345
E W++ E LE + +Y W I EH+ TK+ Q H F +L E
Sbjct: 25 ERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKE 75
>sp|P46939|UTRO_HUMAN Utrophin OS=Homo sapiens GN=UTRN PE=1 SV=2
Length = 3433
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 243 CNYCSQ-PIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREY 293
CN C + PI Y+S K + +C CF GR GH L Y P EY
Sbjct: 3070 CNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGH-KLHY----PMVEY 3116
>sp|P34127|MYBA_DICDI Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=4 SV=2
Length = 1230
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 301 WSDQETFLLLEGIEMYND-NWNEIAEHVSTKSKAQC 335
W+ +E +L++ + ++N NW +IAEH ++ QC
Sbjct: 152 WTSEEDQILIKAVNLHNQKNWKKIAEHFPDRTDVQC 187
>sp|Q6R0H0|ASG4_ARATH Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1
Length = 287
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 299 ETWSDQETFLLLEGIEMYNDNWNEIAEHVSTKSKAQCILH----FVRLPMEDGILENVEV 354
E W++QE LE + +++ +W +I V +K+ Q H F+++ ++G E++
Sbjct: 62 ENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVIQIRSHAQKYFLKV-QKNGTKEHLPP 120
Query: 355 PNTSRTSN 362
P R +N
Sbjct: 121 PRPKRKAN 128
>sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2
Length = 2245
Score = 34.3 bits (77), Expect = 3.4, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
Query: 472 LSAEKVKAAAKAGLAAAATKAKLFADHEER-EIQRLSANIINHQLKRLELKLKQFAEVET 530
LS+EK+ + +A + +L DH+ + +IQ N ++K+L+ KL+++ + +
Sbjct: 1222 LSSEKLGSEEEAKKQINQLELEL-TDHKSKLQIQLQLTEQSNEKIKKLKGKLEEYQDEKK 1280
Query: 531 LLMRECEQVEKARQRFATERTRIVSTRLGPGGVPSQMNLPVVAPSMVNNNIGNNRPQVMS 590
L +E E++++++Q E+ ++ +Q+ + V+ N+ + + ++ +
Sbjct: 1281 QLQQELERIKQSKQSVEDEKNSLI----------TQLTTVKFESTQVSTNVSHQKEKITT 1330
Query: 591 ASSS 594
S+
Sbjct: 1331 LKST 1334
>sp|Q65167|VF475_ASFB7 Uncharacterized protein B475L OS=African swine fever virus (strain
Badajoz 1971 Vero-adapted) GN=Ba71V-077 PE=3 SV=1
Length = 475
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 250 IPAVYYQS----QKE--VDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWSD 303
IP Y QS +KE +++LLC + G F+T L +I + Y + E
Sbjct: 96 IPKEYSQSISLEKKESILELLLCDYISNLGTFITTEKMLPFIIKNRKENYHKVTKEMQDY 155
Query: 304 QETFLLLEGIEMYN 317
TFLL + +E+YN
Sbjct: 156 SLTFLLKKRMELYN 169
>sp|P0CAH9|VF475_ASFWA Uncharacterized protein B475L OS=African swine fever virus (isolate
Warthog/Namibia/Wart80/1980) GN=War-087 PE=3 SV=1
Length = 474
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 250 IPAVYYQS----QKE--VDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWSD 303
IP Y QS +KE +++LLC + G F+T L +I + Y + E
Sbjct: 96 IPKEYSQSISLEKKESILELLLCDYISNLGTFITTEKMLPFIIKNRKENYHKVTKEMQDY 155
Query: 304 QETFLLLEGIEMYN 317
TFLL + +E+YN
Sbjct: 156 SLTFLLKKRMELYN 169
>sp|Q05AA6|DRP2_MOUSE Dystrophin-related protein 2 OS=Mus musculus GN=Drp2 PE=1 SV=1
Length = 957
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 233 TIRERLS-ENHCNYCSQ-PIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPA 290
TI E++ + C+ C Q PI Y+S K+ +V +C CF GR G + L Y P
Sbjct: 599 TIAEQVKHQTKCSICRQCPIKGFRYRSLKQFNVDICQTCFLTGRASKG-NKLHY----PI 653
Query: 291 REY 293
EY
Sbjct: 654 MEY 656
>sp|P0CAH8|VF475_ASFP4 Uncharacterized protein B475L OS=African swine fever virus (isolate
Tick/South Africa/Pretoriuskop Pr4/1996) GN=Pret-089
PE=3 SV=1
Length = 487
Score = 33.9 bits (76), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 250 IPAVYYQS----QKE--VDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWSD 303
IP Y QS +KE +++LLC + G F+T L +I + Y + E
Sbjct: 96 IPKEYSQSISLEKKESILELLLCDYISNLGTFITTEKMLPFIIKNRKENYHKVTKEMQDY 155
Query: 304 QETFLLLEGIEMYN 317
TFLL + +E+YN
Sbjct: 156 SLTFLLKKRMELYN 169
>sp|Q13474|DRP2_HUMAN Dystrophin-related protein 2 OS=Homo sapiens GN=DRP2 PE=2 SV=2
Length = 957
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 233 TIRERLS-ENHCNYCSQ-PIPAVYYQSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPA 290
TI E++ + C+ C Q PI Y+S K+ +V +C CF GR G + L Y P
Sbjct: 599 TIAEQVKHQTKCSICRQCPIKGFRYRSLKQFNVDICQTCFLTGRASKG-NKLHY----PI 653
Query: 291 REY 293
EY
Sbjct: 654 MEY 656
>sp|P11533|DMD_CHICK Dystrophin OS=Gallus gallus GN=DMD PE=2 SV=1
Length = 3660
Score = 33.5 bits (75), Expect = 5.2, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 243 CNYCSQ-PIPAVYYQSQKEVDVLLCPECFHEGRFVTGH 279
CN C + PI Y+S K + +C CF GR GH
Sbjct: 3310 CNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGH 3347
>sp|Q5GN48|DMD_PIG Dystrophin OS=Sus scrofa GN=DMD PE=1 SV=1
Length = 3674
Score = 33.5 bits (75), Expect = 5.2, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 243 CNYCSQ-PIPAVYYQSQKEVDVLLCPECFHEGRFVTGH 279
CN C + PI Y+S K + +C CF GR GH
Sbjct: 3302 CNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGH 3339
>sp|P11531|DMD_MOUSE Dystrophin OS=Mus musculus GN=Dmd PE=1 SV=3
Length = 3678
Score = 33.5 bits (75), Expect = 5.3, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 243 CNYCSQ-PIPAVYYQSQKEVDVLLCPECFHEGRFVTGH 279
CN C + PI Y+S K + +C CF GR GH
Sbjct: 3306 CNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGH 3343
>sp|O97592|DMD_CANFA Dystrophin OS=Canis familiaris GN=DMD PE=2 SV=1
Length = 3680
Score = 33.5 bits (75), Expect = 5.3, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 243 CNYCSQ-PIPAVYYQSQKEVDVLLCPECFHEGRFVTGH 279
CN C + PI Y+S K + +C CF GR GH
Sbjct: 3308 CNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGH 3345
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 254,041,606
Number of Sequences: 539616
Number of extensions: 11091573
Number of successful extensions: 31591
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 31430
Number of HSP's gapped (non-prelim): 180
length of query: 668
length of database: 191,569,459
effective HSP length: 124
effective length of query: 544
effective length of database: 124,657,075
effective search space: 67813448800
effective search space used: 67813448800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)